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Homology
BLAST of mRNA_H-paniculata_contig14990.2964.1 vs. uniprot
Match: D7FK92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK92_ECTSI) HSP 1 Score: 247 bits (631), Expect = 1.330e-72 Identity = 158/323 (48.92%), Postives = 198/323 (61.30%), Query Frame = 1
Query: 16 ALQTIRGGIDTSEPWSVHFSRGE--DLKKAQQKEDRLDYVEKCNRKLVDKMMMIMQGICGTMMSELSHPEFNPGTLNQRRRQRELGRIDRDNLALMHRIERASSSYNRTLIKPKHFQEPHMGLFPRSEHSVKSATTKSR-RIRLDR--------RQKRARTSPLGTTCGRPGGVGVDIRG---AASITSALTEPSGM--LALGTQPENSTDLFAPGECWVEEEGGGASTASKVPVSEYGVLYLVEGETSQGAEANPTDSTTSVGLSPKPPSFSCRAACDSRLERSSSSCRKGRRLVKPVDVKPGESVFLEGVNISGEYMVLNV 936
ALQ++RG +DT EP S+ FSRG+ D+KK QQ+ R ++VEKCNRKLVDKMMMIMQG+CGT++SE + P+FNPGTLN R RQREL RIDRDNLALMHR+E ASS YN+ L+KPK+F++PHMGLFPRSE SVKSA +KSR RIR + RA + CG GG D G AS+TSALTEPS LG + S+ E G + AS++ + E G L G+ T + +P PPS S RA C S ++SS RK RRL +P KPG +VF GV I +Y ++ V
Sbjct: 2 ALQSVRGDVDTREPASMKFSRGQLVDMKKLQQEAARAEHVEKCNRKLVDKMMMIMQGLCGTIVSEQTFPDFNPGTLNYRIRQRELVRIDRDNLALMHRLETASSGYNKALVKPKYFRQPHMGLFPRSEQSVKSAGSKSRKRIRPGGPPTAPSCGSEGRAPSPSFRAGCGGDGGGRSDDGGLGWGASVTSALTEPSSFPTTTLGKFHDASSPASVRKNSGGWRESGADAHASELRIDEPGDLG--GGDXXXXXXXXSVHPATGLARTPHPPSISSRATCGSLSGKASSKLRKCRRLARPTAAKPGATVFQGGVRIGDDYAIVIV 322
BLAST of mRNA_H-paniculata_contig14990.2964.1 vs. uniprot
Match: A0A0L0HP36_SPIPD (Uncharacterized protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HP36_SPIPD) HSP 1 Score: 56.2 bits (134), Expect = 3.400e-5 Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 1
Query: 1 KVHRRALQTIRGGIDTSEPWSVHFSRGEDLKKAQQKEDRLDYVEKCNRKLVDKMMMIMQGICGTMMSELSHPEFNPGTLNQRRRQRELGRIDRDNLALMHRIERASSSY-NRTLIKPKH 354
K+H + L + IDTS P + + LKK Q +E+R +E N+ LVDKM IM+ + + + P +LN RRQRE+ ++++DN+A++ R+E S Y + +K +H
Sbjct: 204 KIHLQRLAKAKSSIDTSPPKEYPHLQHK-LKKLQMQEERRAQIEHDNKILVDKMSSIMK-LEKKVFGQHPSPLRFAHSLNANRRQREVKKVNQDNMAILERLEGRESFYKHEDQVKSRH 320
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 62.4 |
| Seed ortholog evalue | 4.4e-07 |
| Seed eggNOG ortholog | 42099.EPrPV00000014012 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | Novel protein. Source PGD |
| EggNOG OGs | 1MBEA@121069,2ANFN@1,2RZE9@2759 |
| Ec32 ortholog description | KIAA1430 homologue |
| Ec32 ortholog | Ec-17_003220.1 |
| COG Functional cat. | S |
| Best tax level | Pythiales |
| Best eggNOG OG | NA|NA|NA |
| Exons | 5 |
| Model size | 942 |
| Cds size | 942 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14990.2964.1 >prot_H-paniculata_contig14990.2964.1 ID=prot_H-paniculata_contig14990.2964.1|Name=mRNA_H-paniculata_contig14990.2964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=314bp
KVHRRALQTIRGGIDTSEPWSVHFSRGEDLKKAQQKEDRLDYVEKCNRKL
VDKMMMIMQGICGTMMSELSHPEFNPGTLNQRRRQRELGRIDRDNLALMH
RIERASSSYNRTLIKPKHFQEPHMGLFPRSEHSVKSATTKSRRIRLDRRQ
KRARTSPLGTTCGRPGGVGVDIRGAASITSALTEPSGMLALGTQPENSTD
LFAPGECWVEEEGGGASTASKVPVSEYGVLYLVEGETSQGAEANPTDSTT
SVGLSPKPPSFSCRAACDSRLERSSSSCRKGRRLVKPVDVKPGESVFLEG
VNISGEYMVLNVR* back to topmRNA from alignment at H-paniculata_contig14990:1041..3926+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig14990.2964.1 ID=mRNA_H-paniculata_contig14990.2964.1|Name=mRNA_H-paniculata_contig14990.2964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2886bp|location=Sequence derived from alignment at H-paniculata_contig14990:1041..3926+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGTACATCGCAGAGCGCTGCAGACTATCAGGGGAGGTATCGACACCTC
TGAGCCCTGGAGCGTACACTTCTCGCGTGGAGAAGACCTCAAGAAAGCCC
AACAAAAAGTGAGCTTGGACTTCGATCCTCCGTATACGTGCGATCATATG
AATGGCAGTCGCGACTGCATAGTCGATGTCATGTGCTCTCAAGGTCGTTG
ATTTCTGAATGTTTTTGGCCAATATGGTCTCTTCCCCCACAGGAGTTCGT
AAGGTCATTTCTTGGTTTCTTTATCATTGACAAGTGAATCGTCTCGGTTG
ATGGATTATGGTTAACCCGTACGCTCCACTTCAACGTTAGTTGGAAGGCT
GTTGATGGCGGGGGTGCGCGCCTTCGGCTCGGAATCTTGGGCGAGGTAAC
CATCGTGCTTCATCGCGCATATAGCTTACTATTTTTTTACATCACCGCGA
AAGTCTTGGAATCTCGATACGGAAATGCGACTGTGGGTGGAAGACATACC
TATGCTCCGTTTTCTTCGCAAGACTGTTTCTCAGACGTTTTCCTGCAGCT
GTAGCTTTTTGACCCTCAACAGCATGCATTGGTTGAGATAAATAGACTAA
AACACCAATTGTTGGGGAAGAAAACACGCGATACGCCAAGCTTGTCCATC
CATCACCGCCTGTGGGGAAATTGCCATCATACTGCAGGAGGATCGTCTAG
ACTACGTGGAGAAATGCAACCGCAAGCTCGTGGACAAGATGATGATGATC
ATGCAGGTGAGCCACTCAATAACTCCATGCAAGACCATGTAAGCTGATGG
TTTATCTAATATTGGGTCGAGAAAGTTTATCGGTTGCCTTGCCTCCAGAG
TATTGGATATCAGGATGATATGCAAGGAAAAATGATGGTTAGTACTCCTT
GTTCTAGTTGAATAAATTGCAATTGTTTTTCGTGACCAAGATTTGCAACT
CAGCACATGGTACTCCTATATCAAATTACGATAGGTGTTTGGAAAAGCAC
ACGAGCTTGGCACACATGCCGTCCTACATGGAGTGGGATGGTTACTGCCG
CATGTGGGAACGTCTATGCCGTTTTAATCTGCGTTTTCTTCATTTTTGGT
CGCGTCAGGGAATTTGCGGAACGATGATGTCTGAGCTCTCCCACCCGGAG
TTCAATCCCGGTACCCTCAACCAGCGCAGAAGACAGCGTGAACTAGGACG
GATAGACCGCGATAACCTAGCTTTGATGCATCGCATAGAGAGAGCATCTT
CTAGCTACAACAGGACCCTTATCAAGCCCAAGCATTTTCAGGAGCCGCAC
ATGGGCCTGTTTCCAAGGTACGTGTGTACGATTCGAAGTGGTTGTATATG
TCTTGCTGTAGAGGGTCGTCAACGACGGTGATGAATGAAGCTGGTGCTGT
GCACACGGTTCTGGTCGACATAAAACGTGCCAATCCCTAAATTATGTTTT
TCCAGTACAACAAGTTCCCCCAGAATTACCGCTGTAGCCCGCCTGCAGAC
TTTGAAGCAAAATACGTTGCCAGAGTCAACAAGCAGCTTGGCAACGGATA
TAGACGCAATGGTTTGTGCTACGCAATGCGGTTGTCATCTTTTGAAATGG
ATTGTACTTGATGCTGCCGCACAAGAAGTGCCTACGACGAAATATGAAAA
ACTACATTCAAAGTAGTTTGTCAATGATACCTTATTTCCCACCGTCTTGA
GGATGGAAGACCCCATTTCTAAGATGGAAATCTTTGATTGGTAGTACCGT
TGGCCACGATGTCAGCTGAGGAAAACGTCGCCAAGAAACCTTCTATCTAC
CTCCGAATATGCGCTTGCCTGCAATGTGAGCTGAGGACAAAATCGACAAA
AAACTGTCTATCCCCCGTCGGACATGCATTTTGTATACATACAGGATTGC
CGTCCTCAAGCGATAACATTAACATCGAAAAGAGGAATTTACTAGAGTTC
AACAGCTACGATTGTTGGCACACGTGCGTGCAGGTCAGAACATAGCGTGA
AGTCGGCGACGACGAAGTCGAGGCGGATTAGGCTAGACAGGAGACAAAAA
AGAGCCAGAACATCGCCGTTGGGTACCACCTGCGGTCGGCCCGGTGGCGT
CGGCGTGGACATTCGGGGAGCAGCTAGCATTACGTCCGCCCTCACCGAAC
CGTCTGGTATGTTGGCTCTTGGCACACAGCCAGAGAACTCTACGGATCTA
TTTGCGCCTGGGGAGTGCTGGGTCGAGGAGGAGGGGGGCGGGGCATCGAC
CGCGTCGAAAGTGCCGGTGAGCGAATATGGAGTGCTATATTTGGTAGCTA
TTTTTTCCACGACCGTCAAGCATTCCCCAACCTACGCTTGATTATACTGC
GAATCACGTAACCGTTGGAAAGACGGCACCTAAATTAAAGACTTATTTTC
TGGGGAAGAGATTTTCATGTTAATGTGGTTAAGACGGAATCTCCCACCCG
CGACAGCTGACTCTCATAAAACGCCTGTCGTTTCCGGCGTACAGCACATT
CACGTGTTACCTCAGACCGAAGTCAAGCAATCCTTCCATTCTCAAAACAC
ATGCAAGTGCTGAGAAATATCGACAATCTACTCGACGTCAATAAACCTTC
GCTGTTACCGTGCGGTATCGTACCGTTCAACGCCATCTAGGTGGAAGGCG
AAACTTCTCAAGGGGCTGAAGCTAATCCTACCGATTCAACCACTTCCGTG
GGGTTATCGCCAAAGCCGCCATCTTTTTCCTGTCGCGCTGCCTGCGATAG
TAGATTGGAAAGGTCTTCGTCCTCTTGTCGGAAAGGCAGGCGATTGGTCA
AGCCGGTAGATGTCAAGCCGGGGGAGTCAGTGTTTCTCGAGGGCGTCAAC
ATCAGCGGCGAGTACATGGTACTGAATGTCAGGTGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig14990:1041..3926+ >mRNA_H-paniculata_contig14990.2964.1 ID=mRNA_H-paniculata_contig14990.2964.1|Name=mRNA_H-paniculata_contig14990.2964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1884bp|location=Sequence derived from alignment at H-paniculata_contig14990:1041..3926+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGTACATCGCAGAGCGCTGCAGACTATCAGGGGAGGTATCGACACCTC
TGAGCCCTGGAGCGTACACTTCTCGCGTGGAGAAGACCTCAAGAAAGCCC
AACAAAAAAAGGTACATCGCAGAGCGCTGCAGACTATCAGGGGAGGTATC
GACACCTCTGAGCCCTGGAGCGTACACTTCTCGCGTGGAGAAGACCTCAA
GAAAGCCCAACAAAAAGAGGATCGTCTAGACTACGTGGAGAAATGCAACC
GCAAGCTCGTGGACAAGATGATGATGATCATGCAGGAGGATCGTCTAGAC
TACGTGGAGAAATGCAACCGCAAGCTCGTGGACAAGATGATGATGATCAT
GCAGGGAATTTGCGGAACGATGATGTCTGAGCTCTCCCACCCGGAGTTCA
ATCCCGGTACCCTCAACCAGCGCAGAAGACAGCGTGAACTAGGACGGATA
GACCGCGATAACCTAGCTTTGATGCATCGCATAGAGAGAGCATCTTCTAG
CTACAACAGGACCCTTATCAAGCCCAAGCATTTTCAGGAGCCGCACATGG
GCCTGTTTCCAAGGGAATTTGCGGAACGATGATGTCTGAGCTCTCCCACC
CGGAGTTCAATCCCGGTACCCTCAACCAGCGCAGAAGACAGCGTGAACTA
GGACGGATAGACCGCGATAACCTAGCTTTGATGCATCGCATAGAGAGAGC
ATCTTCTAGCTACAACAGGACCCTTATCAAGCCCAAGCATTTTCAGGAGC
CGCACATGGGCCTGTTTCCAAGGTCAGAACATAGCGTGAAGTCGGCGACG
ACGAAGTCGAGGCGGATTAGGCTAGACAGGAGACAAAAAAGAGCCAGAAC
ATCGCCGTTGGGTACCACCTGCGGTCGGCCCGGTGGCGTCGGCGTGGACA
TTCGGGGAGCAGCTAGCATTACGTCCGCCCTCACCGAACCGTCTGGTATG
TTGGCTCTTGGCACACAGCCAGAGAACTCTACGGATCTATTTGCGCCTGG
GGAGTGCTGGGTCGAGGAGGAGGGGGGCGGGGCATCGACCGCGTCGAAAG
TGCCGGTGAGCGAATATGGAGTGCTATATTTGGTCAGAACATAGCGTGAA
GTCGGCGACGACGAAGTCGAGGCGGATTAGGCTAGACAGGAGACAAAAAA
GAGCCAGAACATCGCCGTTGGGTACCACCTGCGGTCGGCCCGGTGGCGTC
GGCGTGGACATTCGGGGAGCAGCTAGCATTACGTCCGCCCTCACCGAACC
GTCTGGTATGTTGGCTCTTGGCACACAGCCAGAGAACTCTACGGATCTAT
TTGCGCCTGGGGAGTGCTGGGTCGAGGAGGAGGGGGGCGGGGCATCGACC
GCGTCGAAAGTGCCGGTGAGCGAATATGGAGTGCTATATTTGGTGGAAGG
CGAAACTTCTCAAGGGGCTGAAGCTAATCCTACCGATTCAACCACTTCCG
TGGGGTTATCGCCAAAGCCGCCATCTTTTTCCTGTCGCGCTGCCTGCGAT
AGTAGATTGGAAAGGTCTTCGTCCTCTTGTCGGAAAGGCAGGCGATTGGT
CAAGCCGGTAGATGTCAAGCCGGGGGAGTCAGTGTTTCTCGAGGGCGTCA
ACATCAGCGGCGAGTACATGGTACTGAATGTCAGGTGAGTGGAAGGCGAA
ACTTCTCAAGGGGCTGAAGCTAATCCTACCGATTCAACCACTTCCGTGGG
GTTATCGCCAAAGCCGCCATCTTTTTCCTGTCGCGCTGCCTGCGATAGTA
GATTGGAAAGGTCTTCGTCCTCTTGTCGGAAAGGCAGGCGATTGGTCAAG
CCGGTAGATGTCAAGCCGGGGGAGTCAGTGTTTCTCGAGGGCGTCAACAT
CAGCGGCGAGTACATGGTACTGAATGTCAGGTGA back to top
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