mRNA_H-paniculata_contig14982.2960.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14982.2960.1 vs. uniprot
Match: D7G356_ECTSI (Sporulation-specific protein 11 homologue n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G356_ECTSI) HSP 1 Score: 176 bits (447), Expect = 1.460e-52 Identity = 84/112 (75.00%), Postives = 95/112 (84.82%), Query Frame = 1 Query: 25 QGFEDWQNPSSTGGTSGLAINADWLTRTLELRSDARYIIVVEKDGVFNRMVEDGFHDR-----------VPSVLVTGQGFPPLAVRACVYRLAEALKLPVLGLLDCNPFGTN 327 +GFEDWQ+P STGG+SGLAI +DWLTR LEL+SDAR ++VVEKDGVFNRMVEDGF+DR +PSVLVTGQGFPPLAVRACVYRLAEAL LPVLGL+DCNPFG + Sbjct: 70 EGFEDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIVLVVEKDGVFNRMVEDGFYDRANVSTLHYLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLS 181
BLAST of mRNA_H-paniculata_contig14982.2960.1 vs. uniprot
Match: A0A6H5KRW2_9PHAE (TP6A_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW2_9PHAE) HSP 1 Score: 165 bits (417), Expect = 6.920e-49 Identity = 78/101 (77.23%), Postives = 88/101 (87.13%), Query Frame = 1 Query: 25 QGFEDWQNPSSTGGTSGLAINADWLTRTLELRSDARYIIVVEKDGVFNRMVEDGFHDRVPSVLVTGQGFPPLAVRACVYRLAEALKLPVLGLLDCNPFGTN 327 +GF+DWQ+P STGG+SGLAI +DWLTR LEL+SDAR I+VVEKDGVFNRMVEDGF D +TGQGFPPLAVRACVYRLAEAL LPVLGL+DCNPFG + Sbjct: 70 EGFQDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIILVVEKDGVFNRMVEDGFCD------ITGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLS 164
BLAST of mRNA_H-paniculata_contig14982.2960.1 vs. uniprot
Match: A0A836CJS5_9STRA (Spo11/DNA topoisomerase VI subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS5_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.070e-33 Identity = 54/97 (55.67%), Postives = 73/97 (75.26%), Query Frame = 1 Query: 37 DWQNPSSTGGTSGLAINADWLTRTLELRSDARYIIVVEKDGVFNRMVEDGFHDRVPSVLVTGQGFPPLAVRACVYRLAEALKLPVLGLLDCNPFGTN 327 DW +P + GGT G ++N+DW++ LE SDA++++VVEKDG F R+ ED F+DR+P ++VTGQGFPP+AVRA V L AL LP GL+DC PFG + Sbjct: 88 DWHDPRTAGGT-GASVNSDWISHALEAESDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLS 183
BLAST of mRNA_H-paniculata_contig14982.2960.1 vs. uniprot
Match: A0A6A3F4G6_9STRA (TP6A_N domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F4G6_9STRA) HSP 1 Score: 102 bits (255), Expect = 8.150e-24 Identity = 44/72 (61.11%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 112 ELRSDARYIIVVEKDGVFNRMVEDGFHDRVPSVLVTGQGFPPLAVRACVYRLAEALKLPVLGLLDCNPFGTN 327 +++S+A+YI+VVEKDG+FNR+ ED F++ VPS+L+TG+GFP LA R V L+ ALK+PVLGL DCNPFG + Sbjct: 183 DVQSNAKYIVVVEKDGIFNRLREDKFYEMVPSILITGRGFPDLATRVFVSLLSHALKIPVLGLCDCNPFGLS 254
BLAST of mRNA_H-paniculata_contig14982.2960.1 vs. uniprot
Match: A0A067D4V8_SAPPC (TP6A_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D4V8_SAPPC) HSP 1 Score: 101 bits (251), Expect = 3.150e-23 Identity = 51/92 (55.43%), Postives = 66/92 (71.74%), Query Frame = 1 Query: 55 STGGTSGLAINADWLTRTLE-LRSDARYIIVVEKDGVFNRMVEDGFHDRVPSVLVTGQGFPPLAVRACVYRLAEALKLPVLGLLDCNPFGTN 327 S G SG I+ + L E + SDA+YIIVVEK+G+FNR+ ED F +RVP +LVTG+GFP LA R V +L + L++PVLGL DCNPFG + Sbjct: 165 SLDGASGRPISRELLRLESEDMISDAQYIIVVEKEGIFNRLGEDLFFNRVPCILVTGKGFPDLATRIFVKKLRDTLRVPVLGLCDCNPFGLS 256
BLAST of mRNA_H-paniculata_contig14982.2960.1 vs. uniprot
Match: A0A0P1AB95_PLAHL (Type ii dna topoisomerase vi subunit a 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB95_PLAHL) HSP 1 Score: 100 bits (250), Expect = 3.690e-23 Identity = 45/72 (62.50%), Postives = 59/72 (81.94%), Query Frame = 1 Query: 112 ELRSDARYIIVVEKDGVFNRMVEDGFHDRVPSVLVTGQGFPPLAVRACVYRLAEALKLPVLGLLDCNPFGTN 327 ELRS+A+ I+V+EKDG+FNR+ ED F D VPS+LVTG+GFP LA R V L++AL++PVLG+ DCNPFG + Sbjct: 171 ELRSNAKIILVIEKDGIFNRLREDKFFDVVPSILVTGKGFPDLATRVFVSLLSKALRIPVLGVCDCNPFGLS 242
BLAST of mRNA_H-paniculata_contig14982.2960.1 vs. uniprot
Match: A0A1V9YKA4_9STRA (TP6A_N domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKA4_9STRA) HSP 1 Score: 100 bits (250), Expect = 4.380e-23 Identity = 53/104 (50.96%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 40 WQNPSSTGGTSGLAINADWL---TRTLEL-----RSDARYIIVVEKDGVFNRMVEDGFHDRVPSVLVTGQGFPPLAVRACVYRLAEALKLPVLGLLDCNPFGTN 327 W + S GGT G I+ D L + +++ SDA+Y+IVVEK+G+FNR+ ED F +RVP +LVTG+GFP LA R V +L++AL++PVLGL DCNPFG + Sbjct: 156 WIDCSQDGGT-GRPISRDILRLESHQMQIFGVFNLSDAKYVIVVEKEGIFNRLGEDLFFNRVPCILVTGKGFPDLATRIFVKKLSDALRVPVLGLCDCNPFGLS 258
BLAST of mRNA_H-paniculata_contig14982.2960.1 vs. uniprot
Match: A0A1W0A8B8_9STRA (TP6A_N domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8B8_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.450e-22 Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 64 GTSGLAINADWLT-RTLELRSDARYIIVVEKDGVFNRMVEDGFHDRVPSVLVTGQGFPPLAVRACVYRLAEALKLPVLGLLDCNPFGTN 327 G +G I D L R ++ SDA+YIIV+EKDG+FNR+ ED F +PS+LVTG+GFP LA R V +L+E ++PVL L DCNPFG + Sbjct: 159 GPTGRPITQDILRLRDDQITSDAQYIIVIEKDGIFNRLGEDQFFHNIPSILVTGRGFPDLATRVFVKKLSERFQIPVLCLCDCNPFGLS 247
BLAST of mRNA_H-paniculata_contig14982.2960.1 vs. uniprot
Match: A0A485L555_9STRA (Aste57867_16293 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L555_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 6.470e-22 Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 64 GTSGLAINADWLTRTLE-LRSDARYIIVVEKDGVFNRMVEDGFHDRVPSVLVTGQGFPPLAVRACVYRLAEALKLPVLGLLDCNPFGTN 327 G +G I + L E + SDA +I+V+EKDG+FNR+ ED F D +P +LVTG+GFP LA R V +L++ L +PVLGL DCNPFG + Sbjct: 121 GPTGRPITRETLRLQPEQITSDANFILVIEKDGIFNRLSEDCFFDTMPCILVTGKGFPDLATRCFVRKLSDCLGIPVLGLCDCNPFGLS 209
BLAST of mRNA_H-paniculata_contig14982.2960.1 vs. uniprot
Match: UPI0007114B24 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007114B24) HSP 1 Score: 92.8 bits (229), Expect = 3.180e-21 Identity = 41/82 (50.00%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 76 LAINADWLTRTLELRSDARYIIVVEKDGVFNRMVEDGFHDRVPSVLVTGQGFPPLAVRACVYRLAEALKLPVLGLLDCNPFG 321 L+I + +T+ L +RSDA++I+V+EK+G+F R+ ED F D +P +++TG+GFP LA RA + L+ L+LPVLGL D NP+G Sbjct: 80 LSITYEMITK-LSVRSDAQFILVIEKEGIFKRLYEDKFFDDMPCIMITGRGFPDLATRALTHFLSVTLRLPVLGLCDWNPYG 160 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14982.2960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14982.2960.1 >prot_H-paniculata_contig14982.2960.1 ID=prot_H-paniculata_contig14982.2960.1|Name=mRNA_H-paniculata_contig14982.2960.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp MLTQTTNVQGFEDWQNPSSTGGTSGLAINADWLTRTLELRSDARYIIVVEback to top mRNA from alignment at H-paniculata_contig14982:2672..3296- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14982.2960.1 ID=mRNA_H-paniculata_contig14982.2960.1|Name=mRNA_H-paniculata_contig14982.2960.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=625bp|location=Sequence derived from alignment at H-paniculata_contig14982:2672..3296- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14982:2672..3296- >mRNA_H-paniculata_contig14982.2960.1 ID=mRNA_H-paniculata_contig14982.2960.1|Name=mRNA_H-paniculata_contig14982.2960.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at H-paniculata_contig14982:2672..3296- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |