mRNA_H-paniculata_contig1498.2957.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1498.2957.1
Unique NamemRNA_H-paniculata_contig1498.2957.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1498.2957.1 vs. uniprot
Match: D7FVE3_ECTSI (MRH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVE3_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 3.010e-115
Identity = 222/509 (43.61%), Postives = 293/509 (57.56%), Query Frame = 3 
Query:  195 PLQGLDIAEDSTGSTLARMRADMSVNFMEAALLEVTISTNEDGEDDVDGVGCQKPGEGGCSWPTYSMTDVDGIVHVCTVRQETPDKDKKRGSSSSHRGKKSGVDISKALEPLNGKCATLTHDYWSYTWCHRGTIVQTHLHEDGSKTEI-NLGKHTRTEVKRVKPVADVESSAKVHGASGLDDKEVSGEXXXXXXXXGVTESSGGDGGDEANADDMTKTGGWIPFFIKAKMKEHKERKAREETIRKEIRRDENLYDGIDDFSQVLAVHDYYGGGDKCDETGGPRETRTSITCCASKLVGADAVATTPMALLVSIQEVSLCSYLVKVCSRLLCPSLADETGGKAGAIGGASEDGNALVPSKGVTA----GSALDVLDALEACFPTKHESWWAYELCLST-GIRQFRKEQSRKPDGSVGAVVSAEFS--LGKFDRSSVEGTGEELFRPGME--GEEGAIVLEFTGGTECDLTNELRSTTVYLKCGNMESISEVVEEYTCHYRLVAVSPLLCR 1691
            P+ GLD+ +D +   +  MRADMS+NFMEAAL + T+++     DD         GE    +P+Y+ TDVDG++H CTVR+        R   +   GKKS  D+S AL+PL G CATL+H YWSY WCHR  + Q H  EDG+ T + NLG HTRTE+KRV       +  K  GAS  D  +   E              G DGG   + +D                                     +L+ GI+D S++ AV+DYY GGD C+ETG  R  +T+ITCC +  V A   +  P+A+LVS+QEVS+CSYLV+VCSRLLCP+  D      G   G  ++    V S GV      G  L +L  LEACFP K E+WWAY+LC+ST G  Q+ ++  RK DGS+ + ++       GK+D+S+V G GEEL RP  E  GE G I+LEFTGGTECDLT  LRSTTV+LKCG+++ + EV E+ TCHYR++A+SPLLCR
Sbjct:   36 PMVGLDLVQDRSVEVMESMRADMSINFMEAALAQATLASGTGDGDDKRSSSEASRGESAV-FPSYTFTDVDGVLHTCTVRE--------RMEQAESPGKKS--DVSTALDPLEGSCATLSHGYWSYKWCHRKDVTQFHKSEDGATTTVVNLGTHTRTELKRVNV-----TPTKADGAS-ADSSDSPHEAEVSRALNNNKSKGGNDGGRHESQND-------------------------------------DLFQGINDVSELAAVYDYYEGGDVCEETGARRFLKTTITCCTANDVSAGGESADPLAILVSLQEVSICSYLVQVCSRLLCPAATD------GLTLGLGQE---AVVSSGVVVTGKVGGVLGLLQELEACFPPKKETWWAYKLCISTTGFSQYHEDLLRKADGSLMSKITVGLGRITGKWDKSTVTGEGEELIRPQQEEEGEGGTIILEFTGGTECDLTGVLRSTTVHLKCGSVQEVREVTEDRTCHYRVLAISPLLCR 481
[Close]
BLAST of mRNA_H-paniculata_contig1498.2957.1 vs. uniprot
Match: A0A7S2DT72_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DT72_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.350e-31
Identity = 79/260 (30.38%), Postives = 127/260 (48.85%), Query Frame = 3 
Query:  993 DYYGGGDKCDETGGPRETRTSITCCAS---KLVGADAVATTPMALLVSIQEVSLCSYLVKVCSRLLCPSLADETGGKAGAIGGASEDGNALVPSKGVTAGSALDVLDALEACFPTKHESWWAYELCLSTGIRQFRKEQSRKPDGSVGAVVSAEFSLGKFDRSSVEGTGEE--------LFRPGMEGEEGAIVLEFTGGTECDLTNELRSTTVYLKCGNMESISEVVEEYTCHYRLVAVSPLLCRHPALMPKLAPVRTVEC 1739
            DY+ GG  C ETG  R+++  + CC     K+       ++ +A   SI+E  LCSY V +C+ +LC           GA+ G  ++             +ALD L+AL+    ++HE WW+YE C     RQF         G   +V+  E+SLGK   + +  +G +        +   G E     +  E+T GT C+LT   R +++ + CG  ++I  VVE+YTCHY+++  +  LC+H A + K    ++V C
Sbjct:   90 DYFVGGQHCHETGEGRQSKVDLRCCTEAEHKVKSKKDRKSSAIASFASIREPGLCSYEVTICTPMLC-----------GAVQGGGKNH------------TALDFLEALQGTCFSRHEGWWSYEFCYKRHFRQFHLVTVIDAKGKTSSVIQDEYSLGKAQEADINSSGADEAKYMVPKISADGSEEGVSTMEFEYTDGTTCELTQAPRGSSIQMICGAGDAILSVVEDYTCHYKVIISTTALCKHEAFVKKTPSTKSVSC 326
[Close]
BLAST of mRNA_H-paniculata_contig1498.2957.1 vs. uniprot
Match: A0A7S2D807_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D807_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.390e-30
Identity = 73/210 (34.76%), Postives = 110/210 (52.38%), Query Frame = 3 
Query: 1125 SIQEVSLCSYLVKVCSRLLCPSLADETGGKAGAIGGASEDGNALVPSKGVTAGSALDVLDALEACFPTKHESWWAYELCLSTGIRQFRKEQSRKPDGSVGAVVSAEFSLGKFDRSSVEGTGEELF--RPGMEGEEGAIVLEFTGGTECDLTNELRSTTVYLKCGNMESISEVVEEYTCHYRLVAVSPLLCRHPALMPKLAPVRTVECVPK 1748
            SI+E S+C+Y V VC+ LLC       GGK+  +                   SA  +L++L     ++HE WW+YE C    +RQF         G V + V  E+ LGK D  +    GE  +   PG+  E  A+ LE+  GT C+LT + R++TV   CG  ++I  VVE++TCHY++V  +P LC+HPA + +    R++ C P+
Sbjct:   28 SIREPSVCTYEVVVCTPLLC-------GGKSQNV-------------------SAFSLLESLNGVCLSRHEGWWSYEFCYKKQMRQFHLVTVTDAKGKVASQVQDEYLLGKADVEAEFKGGESRYITHPGINDEPAALELEYQDGTVCELTKQQRASTVQFLCGTTDTIVSVVEDHTCHYKVVITTPTLCKHPAFVRESPATRSMACRPQ 211
[Close]
BLAST of mRNA_H-paniculata_contig1498.2957.1 vs. uniprot
Match: W7TPI2_9STRA (Mannose-6-phosphate receptor binding domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPI2_9STRA)

HSP 1 Score: 132 bits (332), Expect = 6.440e-29
Identity = 87/268 (32.46%), Postives = 135/268 (50.37%), Query Frame = 3 
Query:  978 VLAVHDYYGGGDKCDETGGPRETRTSITCCASKLVGADA------VATTPMAL--LVSIQEVSLCSYLVKVCSRLLCPSLADETGGKAGAIGGASEDGNALVPSKGVTAGSALDVLDALEACFPTKHESWWAYELCLSTGIRQFRKEQSRKPDGSVGAVVSAEFSLGKFDRSSVEGTGEE----LFRPGMEGEEGAIVLEFTGGTECDLTNELRSTTVYLKCGN--MESISEVVEEYTCHYRLVAVSPLLCRHPALMPKLAPVRTVEC 1739
             +AV DY+ GG  C ETG  R+T     CCA   + ++       V   P A+  L+S++E++ C Y + VCS LLC   A +   +A   G A+             A  AL +L+ + +    +H+ +W+YE C +  IRQF     R+  G+V + V +E+ +G   +   EG  EE    L +    G+     +++TGGT CDLT E+R+TTV   CG   ++    + E+ +CHY+ V  +P LCRHP+   +  P   V C
Sbjct:  213 AMAVVDYFVGGQLCHETGQGRQTIVEFYCCADGSLPSEVQARIADVTRVPYAVAQLMSVEEIATCKYAIIVCSPLLCD--AQQLATRATLTGPAA-------------ASQALQLLEPMASQCLRRHDGYWSYEFCYNGSIRQFHTVAVREATGNVVSKVESEYIIGT-SQPVPEGFKEEDHIILNKEEEGGDPSLFQMDYTGGTVCDLTGEVRATTVQFICGEGPVDVFVSIKEDRSCHYKAVISTPKLCRHPSFRKEKPPTHVVHC 464
[Close]
BLAST of mRNA_H-paniculata_contig1498.2957.1 vs. uniprot
Match: A0A8J5AMZ8_9DIPT (Uncharacterized protein n=3 Tax=Bradysia TaxID=35571 RepID=A0A8J5AMZ8_9DIPT)

HSP 1 Score: 74.3 bits (181), Expect = 6.230e-10
Identity = 52/178 (29.21%), Postives = 78/178 (43.82%), Query Frame = 3 
Query: 1260 PSKGVTAGSALDVLDALEACFPTKH--ESWWAYELCLSTGIRQFRKEQSRKPDGSVGAVVSAEFSLGKFDRSSVEGTGEELFRPGMEGEE-----------GAIVLEFTGGTECDL-TNELRSTTVYLKC--GNMESISEVVEEYTCHYRLVAVSPLLCRHPALMPKLAPVRTVECVP 1745
            P    T    LD++  L +     +  ES+W YE+C  + I+QF +E+  K           E+ LGK+D+   E   E L     +GE+             +  E T GT CDL  N+ R T V   C       I  + E  TC+Y ++ ++P LC HP+  P +     + CVP
Sbjct:   79 PQSPYTGPGPLDLISTLFSSSSCSYRIESYWTYEVCHGSYIKQFHEEREGKTS------KRQEYFLGKWDKQKTEKLRESLAHAERDGEKLKYKKIDGLSLPYLEFEMTDGTLCDLINNQPRITKVLYVCYAPGKNEIYSLKEVSTCNYEVIILTPTLCAHPSFKPTVTAENNINCVP 250
[Close]
BLAST of mRNA_H-paniculata_contig1498.2957.1 vs. uniprot
Match: A0A553QUD1_9TELE (MRH domain-containing protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QUD1_9TELE)

HSP 1 Score: 67.0 bits (162), Expect = 9.620e-8
Identity = 49/148 (33.11%), Postives = 70/148 (47.30%), Query Frame = 3 
Query: 1335 ESWWAYELCLSTGIRQFR--KEQSRKPD------GSVGAVVSAEFSLGKFDRSSVEG--TGEELFRPGMEGE-EGAIVLEFTGGTECDLTNELRSTTVYLKCGN--MESISEVVEEYTCHYRLVAVSPLLCRHPALMPKLAPVRTVEC 1739
            ES+W YE+C    +RQ+   KE  +K +      GS+     AE  + K   S  +   T  E+    +EG+      +E   GTEC+L NE RSTTV   C       I  + E  +C Y +V ++PLLC  P    K +PV  + C
Sbjct:  107 ESYWTYEVCHGKHVRQYHEDKETGQKTNLQEYYLGSMHKNDGAESEMDKSSASDADSLNTNTEVPSKNIEGQLTPYFPVEMGHGTECNLINEPRSTTVLYVCHPEAKHEILTITEVSSCQYEVVVLTPLLCTLPKYRFKSSPVNAIFC 254
[Close]
BLAST of mRNA_H-paniculata_contig1498.2957.1 vs. uniprot
Match: E3MFB3_CAERE (Uncharacterized protein n=5 Tax=Caenorhabditis TaxID=6237 RepID=E3MFB3_CAERE)

HSP 1 Score: 65.5 bits (158), Expect = 4.010e-7
Identity = 45/158 (28.48%), Postives = 75/158 (47.47%), Query Frame = 3 
Query: 1242 DGNALVPSKGVTAGSALDVLDALEACFPTKHESWWAYELCLSTGIRQFRKEQSRKPDGSVGAVVSAEFSLGKFDRSSVEGTGEELFRPG---MEGEEGAIV-LEFTGGTECDLTNELRSTTVYLKCGN--MESISEVVEEYTCHYRLVAVSPLLCRHP 1697
            D    +   G TAG  L+ +   ++      + +W Y++C    +RQ+ ++++       G V   E+ LG FD +    T E + +P    +E E+     + +  GT CD+T + R+T V   C       I  V E  +CHY +V ++ LLCRHP
Sbjct:   78 DEKKAIDYSGPTAGKLLETMLYKDSMCSFLIDVYWTYQVCHGRYVRQYHEDKN-----IAGHVALTEYFLGNFDSALTASTNEHV-KPQTRRIENEDYPYYSVTYNHGTTCDVTGKPRTTDVVYICVAKVQHKILSVTEISSCHYEIVIMTDLLCRHP 229
[Close]
BLAST of mRNA_H-paniculata_contig1498.2957.1 vs. uniprot
Match: A0A182SPI5_9DIPT (MRH domain-containing protein n=1 Tax=Anopheles maculatus TaxID=74869 RepID=A0A182SPI5_9DIPT)

HSP 1 Score: 62.8 bits (151), Expect = 4.680e-7
Identity = 43/157 (27.39%), Postives = 70/157 (44.59%), Query Frame = 3 
Query: 1335 ESWWAYELCLSTGIRQFRKEQSRKPDGSVGAVVSAEFSLGKFDR----------SSVEGTGEELFRPGMEGEE-GAIVLEFTGGTECDLTNELRSTTVYLKCGNM--ESISEVVEEYTCHYRLVAVSPLLCRHPALMPKLAPVRTVECVPKQGHKKK 1766
            ES+W+YE+C  + I+Q+ +E+  K           E+ LG++D+          +  E   E++    +EG     + LE   GT CDL  E R T V   C       +  + E  TC+Y ++ ++  LC HP   P+      + CVP     +K
Sbjct:   52 ESYWSYEVCHGSYIKQYHEERHEKTS------KLQEYFLGRWDQQKTDALKAKYAQAEADKEQMKYKKIEGFNLPYLELEMDSGTICDLNGEPRVTKVLYVCYRFGKNEVYSLKETSTCNYEVIILTAALCTHPKYKPQDTEENKISCVPHGESPRK 202
[Close]
BLAST of mRNA_H-paniculata_contig1498.2957.1 vs. uniprot
Match: A0A2G5VSV5_9PELO (Uncharacterized protein n=3 Tax=Caenorhabditis TaxID=6237 RepID=A0A2G5VSV5_9PELO)

HSP 1 Score: 64.3 bits (155), Expect = 8.620e-7
Identity = 46/153 (30.07%), Postives = 76/153 (49.67%), Query Frame = 3 
Query: 1257 VPSKGVTAGSALDVLDALEACFPTKHESWWAYELCLSTGIRQFRKEQSRKPDGSVGAVVSAEFSLGKFDRSSVEGTGEELFRPG---MEGEEGAIV-LEFTGGTECDLTNELRST-TVYLKCGNMES-ISEVVEEYTCHYRLVAVSPLLCRHP 1697
            V   G+TAG  L+ +   E       + +W Y++C      QF +++        G +   E+ LG FD +    T E + +P    +E E+     + +  GT CD+T + R+T  VY+   N+++ I  V E  +CHY +V ++ LLCRHP
Sbjct:   82 VEYSGLTAGKLLETILYKEKLCSYLIDVYWTYQVCHGRYAIQFHEDKMLN-----GQISRTEYYLGNFDAALTASTNENI-KPQTRRIENEDYPYYSVSYNHGTTCDVTGKPRTTDVVYICVENVQNKILSVTEISSCHYEIVIMTDLLCRHP 228
[Close]
BLAST of mRNA_H-paniculata_contig1498.2957.1 vs. uniprot
Match: UPI00067C6C89 (endoplasmic reticulum lectin 1 isoform X1 n=2 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067C6C89)

HSP 1 Score: 63.5 bits (153), Expect = 1.480e-6
Identity = 42/148 (28.38%), Postives = 67/148 (45.27%), Query Frame = 3 
Query: 1335 ESWWAYELCLSTGIRQFRKEQSRKPDGSVGAVVSAEFSLGKFDRSSVEGTGEELFRPGMEGE-------EGA----IVLEFTGGTECDLTNELRSTTVYLKC--GNMESISEVVEEYTCHYRLVAVSPLLCRHPALMPKLAPVRTVEC 1739
            ES+W+YE+C  + IRQ+ +E+  K       + + ++ LG ++    +   EE+     + E       EG     + + F  GT CDL  + R+T V   C       +    E  TC Y +V +SPLLC HP   P       ++C
Sbjct:  110 ESYWSYEVCHGSHIRQYHEERDGKQ------LKTQQYYLGHWNTQRQKKLEEEMIAAMEKKEPFKTTKVEGITLPYVEMLFEEGTICDLNGKPRATRVLYVCYAHGKHEVYSFKETSTCEYEIVILSPLLCEHPQFKPNQVTENVIDC 251
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1498.2957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FVE3_ECTSI3.010e-11543.61MRH domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2DT72_9STRA1.350e-3130.38Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2D807_9STRA3.390e-3034.76Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W7TPI2_9STRA6.440e-2932.46Mannose-6-phosphate receptor binding domain protei... [more]
A0A8J5AMZ8_9DIPT6.230e-1029.21Uncharacterized protein n=3 Tax=Bradysia TaxID=355... [more]
A0A553QUD1_9TELE9.620e-833.11MRH domain-containing protein n=1 Tax=Danionella t... [more]
E3MFB3_CAERE4.010e-728.48Uncharacterized protein n=5 Tax=Caenorhabditis Tax... [more]
A0A182SPI5_9DIPT4.680e-727.39MRH domain-containing protein n=1 Tax=Anopheles ma... [more]
A0A2G5VSV5_9PELO8.620e-730.07Uncharacterized protein n=3 Tax=Caenorhabditis Tax... [more]
UPI00067C6C891.480e-628.38endoplasmic reticulum lectin 1 isoform X1 n=2 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1498contigH-paniculata_contig1498:16927..25609 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score380.2
Seed ortholog evalue1.7e-102
Seed eggNOG ortholog2880.D7FVE3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Glucosidase II beta subunit-like protein
EggNOG OGs2EW69@1,2SY1U@2759
Ec32 ortholog descriptionGlucosidase II beta subunit-like
Ec32 orthologEc-14_000790.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons12
Model size3120
Cds size1725
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1498.2957.1prot_H-paniculata_contig1498.2957.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1498 16995..24282 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929197.394368-UTR-H-paniculata_contig1498:16926..169941622929197.394368-UTR-H-paniculata_contig1498:16926..16994Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1498 16927..16994 +
1691480766.6248937-UTR-H-paniculata_contig1498:16926..169941691480766.6248937-UTR-H-paniculata_contig1498:16926..16994Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1498 16927..16994 +
1622929197.593253-UTR-H-paniculata_contig1498:24282..256091622929197.593253-UTR-H-paniculata_contig1498:24282..25609Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1498 24283..25609 +
1691480766.7397864-UTR-H-paniculata_contig1498:24282..256091691480766.7397864-UTR-H-paniculata_contig1498:24282..25609Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1498 24283..25609 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929197.4075327-CDS-H-paniculata_contig1498:16994..171891622929197.4075327-CDS-H-paniculata_contig1498:16994..17189Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 16995..17189 +
1691480766.6352441-CDS-H-paniculata_contig1498:16994..171891691480766.6352441-CDS-H-paniculata_contig1498:16994..17189Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 16995..17189 +
1622929197.4227033-CDS-H-paniculata_contig1498:17635..178001622929197.4227033-CDS-H-paniculata_contig1498:17635..17800Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 17636..17800 +
1691480766.6436596-CDS-H-paniculata_contig1498:17635..178001691480766.6436596-CDS-H-paniculata_contig1498:17635..17800Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 17636..17800 +
1622929197.4400918-CDS-H-paniculata_contig1498:18273..184471622929197.4400918-CDS-H-paniculata_contig1498:18273..18447Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 18274..18447 +
1691480766.6516216-CDS-H-paniculata_contig1498:18273..184471691480766.6516216-CDS-H-paniculata_contig1498:18273..18447Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 18274..18447 +
1622929197.461803-CDS-H-paniculata_contig1498:18714..188231622929197.461803-CDS-H-paniculata_contig1498:18714..18823Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 18715..18823 +
1691480766.6588902-CDS-H-paniculata_contig1498:18714..188231691480766.6588902-CDS-H-paniculata_contig1498:18714..18823Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 18715..18823 +
1622929197.477379-CDS-H-paniculata_contig1498:19271..194061622929197.477379-CDS-H-paniculata_contig1498:19271..19406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 19272..19406 +
1691480766.6665936-CDS-H-paniculata_contig1498:19271..194061691480766.6665936-CDS-H-paniculata_contig1498:19271..19406Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 19272..19406 +
1622929197.4933202-CDS-H-paniculata_contig1498:20237..203951622929197.4933202-CDS-H-paniculata_contig1498:20237..20395Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 20238..20395 +
1691480766.674543-CDS-H-paniculata_contig1498:20237..203951691480766.674543-CDS-H-paniculata_contig1498:20237..20395Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 20238..20395 +
1622929197.508551-CDS-H-paniculata_contig1498:20780..209091622929197.508551-CDS-H-paniculata_contig1498:20780..20909Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 20781..20909 +
1691480766.6827037-CDS-H-paniculata_contig1498:20780..209091691480766.6827037-CDS-H-paniculata_contig1498:20780..20909Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 20781..20909 +
1622929197.5201917-CDS-H-paniculata_contig1498:21716..219131622929197.5201917-CDS-H-paniculata_contig1498:21716..21913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 21717..21913 +
1691480766.6918948-CDS-H-paniculata_contig1498:21716..219131691480766.6918948-CDS-H-paniculata_contig1498:21716..21913Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 21717..21913 +
1622929197.5323508-CDS-H-paniculata_contig1498:22417..225231622929197.5323508-CDS-H-paniculata_contig1498:22417..22523Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 22418..22523 +
1691480766.7025793-CDS-H-paniculata_contig1498:22417..225231691480766.7025793-CDS-H-paniculata_contig1498:22417..22523Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 22418..22523 +
1622929197.5493212-CDS-H-paniculata_contig1498:23054..231591622929197.5493212-CDS-H-paniculata_contig1498:23054..23159Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 23055..23159 +
1691480766.712468-CDS-H-paniculata_contig1498:23054..231591691480766.712468-CDS-H-paniculata_contig1498:23054..23159Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 23055..23159 +
1622929197.5622554-CDS-H-paniculata_contig1498:23543..236921622929197.5622554-CDS-H-paniculata_contig1498:23543..23692Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 23544..23692 +
1691480766.723489-CDS-H-paniculata_contig1498:23543..236921691480766.723489-CDS-H-paniculata_contig1498:23543..23692Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 23544..23692 +
1622929197.5778186-CDS-H-paniculata_contig1498:24179..242821622929197.5778186-CDS-H-paniculata_contig1498:24179..24282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 24180..24282 +
1691480766.731695-CDS-H-paniculata_contig1498:24179..242821691480766.731695-CDS-H-paniculata_contig1498:24179..24282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1498 24180..24282 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1498.2957.1

>prot_H-paniculata_contig1498.2957.1 ID=prot_H-paniculata_contig1498.2957.1|Name=mRNA_H-paniculata_contig1498.2957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=575bp
MSDGYRLTMVRRCRLVLTYAALSFVVLSRWLQSNAQTVQPGLPLQGLDIA
EDSTGSTLARMRADMSVNFMEAALLEVTISTNEDGEDDVDGVGCQKPGEG
GCSWPTYSMTDVDGIVHVCTVRQETPDKDKKRGSSSSHRGKKSGVDISKA
LEPLNGKCATLTHDYWSYTWCHRGTIVQTHLHEDGSKTEINLGKHTRTEV
KRVKPVADVESSAKVHGASGLDDKEVSGEGEGGGGGLGVTESSGGDGGDE
ANADDMTKTGGWIPFFIKAKMKEHKERKAREETIRKEIRRDENLYDGIDD
FSQVLAVHDYYGGGDKCDETGGPRETRTSITCCASKLVGADAVATTPMAL
LVSIQEVSLCSYLVKVCSRLLCPSLADETGGKAGAIGGASEDGNALVPSK
GVTAGSALDVLDALEACFPTKHESWWAYELCLSTGIRQFRKEQSRKPDGS
VGAVVSAEFSLGKFDRSSVEGTGEELFRPGMEGEEGAIVLEFTGGTECDL
TNELRSTTVYLKCGNMESISEVVEEYTCHYRLVAVSPLLCRHPALMPKLA
PVRTVECVPKQGHKKKRGSYWPIS*
back to top

mRNA from alignment at H-paniculata_contig1498:16927..25609+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1498.2957.1 ID=mRNA_H-paniculata_contig1498.2957.1|Name=mRNA_H-paniculata_contig1498.2957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8683bp|location=Sequence derived from alignment at H-paniculata_contig1498:16927..25609+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGACCCCCAGACGTGGGGAGAGGTACTGAGAACAAGAAAGAGCGCCATC
GGCGTGTCGAGGGTACCCATGTCAGATGGATATCGGTTAACCATGGTTCG
TCGGTGTCGTCTGGTTTTAACCTACGCAGCGTTATCTTTTGTTGTCCTGT
CGCGGTGGTTGCAATCGAACGCACAGACTGTTCAACCTGGTTTGCCTTTG
CAAGGGCTTGACATCGCTGAAGACAGTACTGGCAGTACTTTGGCGAGAAT
GAGAGCTGACATGGTGAGTCATAAATTTAACTGATCTCATAGTTTGGGCT
TGGATGCGTTGTGCTGTGTCTTGTTTGCTTGCTTGGCAGTATTTGCAGTA
CAACGTAGGAGCAGGCAATCAACACAAGCACACAACAAACAGACGATATT
ATCAGCAGGACAGAGAGTGGAACATTTGTCCTTCTCGAGAGAGTGTCACA
TGACTTGAACAGAGACGTACCTCAAAACATCTATACTGTATAGAGACAGA
GATAGACAAGACAATAAAGCTCTGCTCTTGTACTTCCACCGTATAGTGTA
CTGTAGTGTACTGACTGTACTGTACAGCTTGCTACCACTTACTGCTTTTT
CCAGGACTGCGTTATTCAAAACCATCTCCGACCCCCTTTGTTCTTTTGTT
CCAATCTTGACCAATTTCTATCAAACTGAACCGTTGATCTTGACCTGGTG
GAAATATAGAGCGTGAACTTTATGGAAGCAGCTCTGCTGGAGGTGACGAT
ATCAACAAACGAGGATGGCGAGGACGATGTAGATGGTGTGGGTTGTCAAA
AGCCCGGGGAGGGGGGATGTTCGTGGCCGACGTACTCCATGACCGACGTA
GACGGAATTGTCCATGTTTGCACGGTGAGGGCTAGAGTACGTACTAGTGT
GCGAAATGACTGATAACGGACTGTCGACGGGCAGAGTTTAGACAAGCGTT
CACAATTGCATGGGAACATACTGTTTGCTATTTTAGCGGACGAAATGGAG
AAAATCGGTACAGGTAATTGTTACACGTTAGACGTGTATACATTTGACTT
GTTACGCCAGGAGCAAGGACTTGTTGAACGTTTGCGGATATAACCGCATT
TGCATAATACGCCGGAGTACAGTACAGTAACATGTTTTACTTCTCTGGCA
CAAAGCAAAAAGCACTGTGCATGGATGCCGGTACTTTTCCACATATACAT
CATGTTTATGTCTGATATCTATCGTTGGACGGGTTGCGTCGATGTATTGC
TCCGTTTCCACTGCCGATTTCGGCCCTTCACAAGTTCCCCACCTACTACT
CTACTTGGATGCCCTGATTGACATGGGATTGACATGGGTTGAAACAGGTC
CGACAGGAGACGCCAGACAAAGACAAGAAACGAGGCAGCAGCTCGTCTCA
TAGGGGCAAGAAGAGTGGCGTGGATATCTCCAAAGCTCTGGAGCCTCTGA
ATGGAAAATGCGCGACGCTGACTCACGATTACTGGAGCTACACATGGTGC
CACAGAGGGACTATCGTGCAGGCGAGTTGTAGTCCACTTGTGCATGTTAG
GAACTATATTTTGCGCGTGGGCAAGGGTGAGTTGAGACTGTACTGGGACG
CAGCTCACGCTGCTATTTCATGCTGCCGGAGACTTGATCTCAATCCCCTT
TTCGAAGTACTGTACAGTACGACTCGTGCTCGACTGCTAAGTTGAGTCGA
CTATTGTTCCGCGATAACTTTGGACCGACTATTGATAGCTCTTTATCTGT
AGATTTAACCTTGAATCTCTGCTTTCCTTACAAAACAGACGCACCTCCAC
GAGGATGGCTCCAAGACGGAGATCAATTTGGGGAAGCACACTAGAACAGA
GGTCAAGCGCGTCAAACCCGTTGCAGACGTCGAAAGCTCTGCAAAAGGTA
CGTCGACGTCTATGCCTTCGTTTGTTTCAAAGCGCCGCACTGCGCAATAT
TGCACTAGTAGTAAAAGGACACCACAATGTTTTTTGAGAGGGAAGCTACA
TACTTCACACATCACTGTTATCGTAGCGGAGAGTAGGCCATGCATGTGAA
GGTGAAGTATCGACTTGAACAAAACGAAACGTTGTAAAGGAAAGGGGCGA
AAGAGCTCCTCCGACTTGGTAAGGGTGCCCTTCCATCTTTCTTGACTTGA
CATTACGATTTTCCTGGGATCGTTGTCCACGGACTAAAGTAAATATTTTT
CCTTTAGCTCAGCAACCCTGAGTCCCCCCATCATGACCTCAGATACAAAA
CCTACTGCCCTCTTTCTCTTTGTTTACTTGACCTTGCCTATGTCGCTGCC
GTTCTCCATCTCCGAACCTACGTCTACGGTACTATGGTATTGCAGTACAC
GGTGCCAGCGGCTTGGACGACAAGGAAGTCAGCGGCGAGGGAGAGGGCGG
AGGCGGAGGCCTCGGCGTCACTGAAAGTAGCGGTGGTGATGGAGGCGACG
AAGCAAACGCTGACGACATGACAAAAACGGGTGATAATGATCTCGATGAC
GCTGATAGTGAATTTCTCCAGAAACGTGTCAAAACCTCGGTGCCTGCTTT
CTGTGCGTGCTTGTTTTGTTTGGTATTTTGAAAACTGATTGCCTACCGTG
ATGGTACCGCGTTTACGTTTATTTCTAGTTTCAAAGTCTAGCTTTAGGCC
TACCTTTATTTTTACAGTGCTTTTACGCTTGATTCTAGTAAAAAGTGCTC
AGAGGTGCTGTCCACATGCCTGTTTGAAAAGTATGGGCAGGGCCTACATC
TTGGTGGCTATGCTGCTTAAGATCGACTGCAGCACAAGCCTCGTCGGTGG
CGGGCAATCCCTCTGATAGTGTTACTCAACAAACGTTGTACAGGTGTAAT
GCCTCGTATGGGGCGGGTTTCCCCAGAGCTTGTGCGGCGGAGAAGGTTGA
CCCCCCCCTGTCGTCGCCACCAAGAAAACACACACGCCTGCATGTTACAA
GTGTAGGCAGCCAAACCTGCAGCAATAATACTTTAAAGTCATTTTGCTTA
CGTCTGGATGTTCATCGACGGTGCGCTGAAAGCGTCGTAGTTCCCCGTCA
CAATCAATATGGAAGGGACACACACACACACACACACACACACACACACA
CAAATATCTGTATTACTGTCAGCGGTGCGATGAGCCCACCTCAGCAAAGA
GAAATAGTTGCGTTTCTTTTTTCGCTCTCTGCCAGTGGTACAAGATACCG
TCTACTAGCTACCAGTAACTTTCATGTGCTATCGTTGACGAGGTAGCCTC
TACACCTCATTGTTTTGGGTTGATCGATAAACCACCTGTCAATCGCTCCA
ACTCTTCGCAGGGGGATGGATTCCTTTTTTTATTAAGGCGAAAATGAAGG
AGCACAAGGAAAGGAAGGCGCGAGAAGAAACGATAAGGAAAGAGATACGG
AGGGACGAGAACCTTTACGACGGCATAGACGACTTTTCGCAGGTGTTGGC
AGTTCATGACTACTATGGGGTAAGTGACGTTTGTGCTAGTTACCCGAACA
AGAATGATATCCATCCTTTAACGCCTCTGTTGCTCCTTTGGGAAGGGCAG
GAGAGGGGGGCAAAAGTCCATGAGGCGATCGATGTACAAAGTCGGACAAA
AAGTTGTGTTTATTGTTCGTAGAAAAAAGACAAGTCCACCAAGGTGTGTA
CCCTCTAGACCAGGAGCCTACTGCGGTTGTCCCTGCTTTGGTGTATGCGC
TTACTTACTGTAAATATGAAACTTCATATACTACGACAGGAAAGTGCAGC
ATGCCGATCGTAGCCGGTAACAACATGGGATCCTCTTCTGAAATATATTC
TTTCATATTTTTCGTACATTTATTCATCTTTGTCTCCCGGTTGGATTGCT
TCAGGGAGGCGACAAGTGCGACGAAACTGGAGGGCCTCGAGAAACGCGAA
CATCTATTACCTGCTGCGCTAGCAAATTAGTGGGAGCTGACGCCGTCGCC
ACTACTCCCATGGCGCTGCTTGTGTCCATTCAGGTAAATTCCTAACCTGA
CATATTGTCAGTTTTTTTCCGGTGCGGTTCTTTTGACTCCTGAGGAGAGG
TAGCGTGAATTATTCGCAGTGCTCGTTGCCATGTCGAAACGCTTTCAGAG
CCTTTCAGAGCCCTCTAGAACGTTACGTGTTTACCTGGTATGTGTACCTG
GTACAAATGATAAATTATCTTCCTGTGTACCATGGTTTAAGTAGGTACCC
TTGAGAACGTGCAGTCAGTCTAAGAACTAACTAAATAGCGAACAGGGCCA
GCGGTCGCCGTGCTCGGTTACCGTCTAGGGCTACCAGATGTCGTTTCAAA
GAACAATTTGATTAGATTCTATCTCAGAACTTGATTGTCCGGCCCTCGTT
TAAGTGTTTCGTTAAAGTGCCTTTCATGACTAACTAGCATTATTCATAAC
ATTATTGAGAAGACGATGCTCCCGGGAGAGACTGGCTCTCGAGGGAACAC
CACCTGCTCTATGCGGGTCGGTTCTACGTCTTGGGATGTAGTGCGGAGCA
AGCACTTGGGTTTTGTTCTGTCGTAGATGGAGTGACCATCGAGGGTCGGA
CTCAGCTAGAAAGCTGTTCCGAGTAAGGTTCAAATATGCCATTGGTCGTT
GTGTAGAGGGTCGGTGTTCAGGAACGTCAGGAACGTCAGGAACGTGCTCT
CCACATTATTAATAGCATTGTTAATAACATTATTAATAGATCATTACAAA
TTTCTGAATGCACCTCAAAATAAATTATGAATGATCGGATGTCTTGGTAA
ACTCCCCCTCTGTTGTGGTTCACGCATCTACGTTCCGTAGGAAGTATCAC
TCTGCTCGTACCTGGTCAAGGTCTGTTCTCGATTGCTTTGTCCATCTCTG
GCGGACGAGACCGGGGGGAAAGCGGGTGCGATTGGCGGTGCATCAGAGGA
TGGCAACGCGCTAGTGCCAAGCAAGGGAGTCACGGCCGGTAGTGCGCTAG
ATGTTTTGGACGCATTGGAGGCGTGCTTTCCAACAAAGTAAGAACGAAAC
AGACATGTTCAGTCCTTCTTTTTATTTTTTCTCAAATCGAAGAACGTCCT
CTTGAGTCGTCCTCTTGAGTCGTCCTCTTGAGTCGCACGAGTCATGCTTC
GCATTTTTGTTCGTTTCTCAAGGGTGTTGCTACTTTGCTGGAAATATATG
TCCACTAATGACCGTCGCGCGATACATGGGTTCCCTGGGGAAGCTTATCC
GCCGCACTCCAATTAAGGCGTTTCGTATGTGGTATTATCGTACACGACCA
AGCGAGAGCAACCGCGAAGTACCCCAAGTATGTCACACATATATGCACAC
GTAGTATGCTGGGATTACCAAGGATGAGCGCTTGGAATGATAAAGCGATG
TACCGCGTGTGAGATGTAAACGTTTGCCCTCGGGAACTATTTATCACATG
CACTACCGCCCGAAACGTTTTTATTGAGGAGGGTACACAGTTAAATAACG
ATTTTTTTTTGTGTTGTTCCGTTTTTTACGCACGCGCGCAGGCATGAGTC
GTGGTGGGCATACGAGCTGTGCTTGTCCACCGGAATCCGCCAGTTTCGCA
AGGAGCAGAGTCGGAAACCCGACGGGAGCGTGGGTGCCGTAGTGTCGGTA
AGAATATATAATCTATACCTTTAGAACATGGTGAAGTGATAGACACGAGA
TTATTGCTAGGTTTATCTGCAACCAATACCCCCCCGCCACATACATACTT
ACATAGAAAAAAAAAGGACGGCAATTCTGAACGTAGCGGATTTGACAAGA
TCGGCGAGAAGATGTCATATTTGCTGTCTTGAGAACTTTAGCCTCTTTTA
TGGGAGAGGAAATCCAGGGGGATATATGGGGGGCAGGCGAGGCAACCTTG
GCATTGCGATTTACCGGACTGCTATGATGCGGGATTCCTAATGTGTACGT
CGATTTTTTTGTCGAGTCGCTGCTTTTGGAAGCATGTATAACCGTTTTTG
CTTCTGCCCTCTCTGGAAAACATCACTATTCGCGTTGGACTCAGATCTTC
GGGACGTGGGAACAATAGCGACACTAACGTCACAATGCGCCCTGTTTTAT
GTTCCATTTTAGTCGGAAGACATTTTTTTTCTGCATACTCTCCCTCAGCT
CGTGTTGCCGTTTTGTCCTGTTTTTCAGGCGGAATTTTCCCTAGGAAAAT
TCGATCGGTCGAGCGTAGAGGGCACAGGAGAGGAGCTGTTTCGTCCGGGG
ATGGAAGGAGAGGAAGGCGCCATAGTTTTAGAGGTGAGGTGTACTCCGCG
GGGGCTAGTTAGTATTATTGTCTTGACGGATGAGCATCAATACCACAGCT
TGATGAGTAAAGCAACATGATCTTCTCAAAGGTATCGATTATTTATAACA
GTTATGCCGCTGTAATGTAGCTTGATCATCAGCAAATGTCCCCCTCCCCC
CTACTCCCCATCGGAAGTCGTTCTCTCTTTCTCTGATAAGAACAGAGCCT
CCTCTTCCGGAAGACGCGTAGTTAATAGTGTAAAAACATGAGTACGTCTC
CCCCCCCCCCACTCCCAGAGAAATGCAGCAATGTGACTGTATTCGTGTGT
TGTTTTCAATTTTTTCCGCCACCGCCGGTTGTTGCCGTCTTCCATGTCGC
ATGTCATGTCTTTTCAGTTCACGGGGGGCACCGAGTGTGACCTTACGAAC
GAGCTTCGATCAACTACGGTATATCTCAAGTGCGGTAACATGGAGTCAAT
CTCGGAAGTGGTTGAAGAGTATACGTGCCACTATAGACTTGTCGCTGTGT
CACCTCTCCTCTGCAGGTGAACATATGAGATATGAGACGTGAGGCATGAG
ATATATCAGTACTGACTGGTGCTTTTCAAGGGTTTATCAGTAGTACATAA
CGCGATGACCTTCATTAAGGATGGGTTTATACAGTAGTCATGTCGCGCTC
CCGTGTAGCAACCCAGATACCGACCAAGTTGTTGGCAAGTCTCGAATTTT
TCTGTATTTCACCGAGAATCAAACCATTCAAGTAGGAAGTATTTCCGGGA
ATATATATTTTTTGTGCCTGACTGTCTGTGTCCTGTAAAGGACATGGTCC
AACAATCACCTTGCTCAAGCTTGTGTGCCACCTGGTTAGCTTTCATCTAT
GACCCGAATGAAGGCTCGCCTGTCTTGCCATTGTTTTTGATGACGTTGGA
TATATATATCGTGGCCCCATTGGTTCCCTGCCCCAACCGACACTGCCTTC
TGTCTCTGTCTGTCCATGGTCTTCAATAATACGTGCTCTTGTGTTAATAA
CAGGCACCCGGCGCTGATGCCCAAACTAGCTCCTGTACGCACTGTGGAAT
GCGTCCCTAAGCAAGGACACAAAAAGAAACGTGGCTCATATTGGCCGATT
AGTTAGAGAGAGACCCTATTTTGGTGTGAGGCAGTCCTCAAGGGAAGGGG
TCCAAGCTATCCAACACCTCAACACGTGCAGTTAGTGTCGAGTATGCCCA
ACTTGGATCACTCTCCTTAACTTGAAGGGCAGTGGGCACGGGCGTAAGGA
TCCCTGATGATGTCGACTTGTCATCTTGCTTGGATGTGTATTGGGAGGAT
ATGGTGATCAACGACCAACGAGGAGGGTATACAGTATGTGGAGCCTGGTT
TTCCTTGGAGCTTTCCGTCGCCTTGAGTACCATTCTCGCTCTTGAGTGCG
ATGCACTTTTGTAGGCACTGTTTGGCCCAAGCCTAGTCTGCCCTACAGTG
TAGTGACAACCACAGACGTCCATGCCATATGTAGGTACGGTGGTGAGCGT
GACGTGTCGCTCGTTTGTGTATGTGCTGCTGGGCTTCGCTCGGACAGCTT
GGTTTTCGGAAATATTGTATTGCGCGTACCGTGGAAAGGGCGACGGCGAA
TAGCGAGGCAGCCCTTGACGGAGATGGCGATGAACCTCGGCTGGAGCGGG
CGGTCCGGATGGCGGGTGAAAGGAGGGGGGAGGTCGGATTACGTCCAATA
TTGAATTCATGAGATGCCTGTCGACACTGTAGTATCGCAGCTGTAAAATA
TTGGTGCTTTGCGGGGATGGCTTCCATATTTTTTATGTCGCTGTAGAAGC
ACGAATTTGCAGAATTTTTGTGTCTGATTTCGGTGGGTACAACAGTCAGT
AGCTCTAGATCGTGGGTTTCTGAGAAGTGAAAAGGTTTTTCCTTAGAACA
GTTATGTTTCGAAGACAAGCGGTGTTGTGTGCGGTGGAGTGATACCTTCA
GTAAACCGTAAATGGTGCAAATAGCGATGCTGTAAGAAACATGTACGACC
TTCGTGCGTGACGGTGCACAAACTGGGGACGCGATTGCAAAAACTACGAG
GAGGGTCAGGTGCTGATCTCTGTCGAGTTGCGTACAGTGATTGAGGGAGC
GTGGCCTACCCGTTGCCTCAGAGCAATACAGGAACAATGTCGAGTACAAG
GTTCAATCGCCGAGTTTTTCCGAGTCTGAAGGCGATTATACTATTTGATA
CTCCTTAGACTAATGCAGTTTCGGTGCGGCTCAAGACAGGCAGTTCTGTA
AAAGGAAATGTAGACGCACTTCGGTATGGAAGCATCGGATAGAGGTTATT
GCCCTAGCCTTCCGAGGGTTAAAAAAAAAGAAAAAGACAGGCAACTATGT
TTATAGCTTGTATATTATCCTTCAGCATGTGAAAACCACAGAGGGTCGCA
GACCAAATAATTCGTTGAGATGAGAAAGAGAGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1498:16927..25609+

>mRNA_H-paniculata_contig1498.2957.1 ID=mRNA_H-paniculata_contig1498.2957.1|Name=mRNA_H-paniculata_contig1498.2957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3450bp|location=Sequence derived from alignment at H-paniculata_contig1498:16927..25609+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCAGATGGATATCGGTTAACCATGGTTCGTCGGTGTCGTCTGGTTTT
AACCTACGCAGCGTTATCTTTTGTTGTCCTGTCGCGGTGGTTGCAATCGA
ACGCACAGACTGTTCAACCTGGTTTGCCTTTGCAAGGGCTTGACATCGCT
GAAGACAGTACTGGCAGTACTTTGGCGAGAATGAGAGCTGACATGATGTC
AGATGGATATCGGTTAACCATGGTTCGTCGGTGTCGTCTGGTTTTAACCT
ACGCAGCGTTATCTTTTGTTGTCCTGTCGCGGTGGTTGCAATCGAACGCA
CAGACTGTTCAACCTGGTTTGCCTTTGCAAGGGCTTGACATCGCTGAAGA
CAGTACTGGCAGTACTTTGGCGAGAATGAGAGCTGACATGAGCGTGAACT
TTATGGAAGCAGCTCTGCTGGAGGTGACGATATCAACAAACGAGGATGGC
GAGGACGATGTAGATGGTGTGGGTTGTCAAAAGCCCGGGGAGGGGGGATG
TTCGTGGCCGACGTACTCCATGACCGACGTAGACGGAATTGTCCATGTTT
GCACGAGCGTGAACTTTATGGAAGCAGCTCTGCTGGAGGTGACGATATCA
ACAAACGAGGATGGCGAGGACGATGTAGATGGTGTGGGTTGTCAAAAGCC
CGGGGAGGGGGGATGTTCGTGGCCGACGTACTCCATGACCGACGTAGACG
GAATTGTCCATGTTTGCACGGTCCGACAGGAGACGCCAGACAAAGACAAG
AAACGAGGCAGCAGCTCGTCTCATAGGGGCAAGAAGAGTGGCGTGGATAT
CTCCAAAGCTCTGGAGCCTCTGAATGGAAAATGCGCGACGCTGACTCACG
ATTACTGGAGCTACACATGGTGCCACAGAGGGACTATCGTGCAGGTCCGA
CAGGAGACGCCAGACAAAGACAAGAAACGAGGCAGCAGCTCGTCTCATAG
GGGCAAGAAGAGTGGCGTGGATATCTCCAAAGCTCTGGAGCCTCTGAATG
GAAAATGCGCGACGCTGACTCACGATTACTGGAGCTACACATGGTGCCAC
AGAGGGACTATCGTGCAGACGCACCTCCACGAGGATGGCTCCAAGACGGA
GATCAATTTGGGGAAGCACACTAGAACAGAGGTCAAGCGCGTCAAACCCG
TTGCAGACGTCGAAAGCTCTGCAAAAGACGCACCTCCACGAGGATGGCTC
CAAGACGGAGATCAATTTGGGGAAGCACACTAGAACAGAGGTCAAGCGCG
TCAAACCCGTTGCAGACGTCGAAAGCTCTGCAAAAGTACACGGTGCCAGC
GGCTTGGACGACAAGGAAGTCAGCGGCGAGGGAGAGGGCGGAGGCGGAGG
CCTCGGCGTCACTGAAAGTAGCGGTGGTGATGGAGGCGACGAAGCAAACG
CTGACGACATGACAAAAACGGTACACGGTGCCAGCGGCTTGGACGACAAG
GAAGTCAGCGGCGAGGGAGAGGGCGGAGGCGGAGGCCTCGGCGTCACTGA
AAGTAGCGGTGGTGATGGAGGCGACGAAGCAAACGCTGACGACATGACAA
AAACGGGGGGATGGATTCCTTTTTTTATTAAGGCGAAAATGAAGGAGCAC
AAGGAAAGGAAGGCGCGAGAAGAAACGATAAGGAAAGAGATACGGAGGGA
CGAGAACCTTTACGACGGCATAGACGACTTTTCGCAGGTGTTGGCAGTTC
ATGACTACTATGGGGGGGATGGATTCCTTTTTTTATTAAGGCGAAAATGA
AGGAGCACAAGGAAAGGAAGGCGCGAGAAGAAACGATAAGGAAAGAGATA
CGGAGGGACGAGAACCTTTACGACGGCATAGACGACTTTTCGCAGGTGTT
GGCAGTTCATGACTACTATGGGGGAGGCGACAAGTGCGACGAAACTGGAG
GGCCTCGAGAAACGCGAACATCTATTACCTGCTGCGCTAGCAAATTAGTG
GGAGCTGACGCCGTCGCCACTACTCCCATGGCGCTGCTTGTGTCCATTCA
GGGAGGCGACAAGTGCGACGAAACTGGAGGGCCTCGAGAAACGCGAACAT
CTATTACCTGCTGCGCTAGCAAATTAGTGGGAGCTGACGCCGTCGCCACT
ACTCCCATGGCGCTGCTTGTGTCCATTCAGGAAGTATCACTCTGCTCGTA
CCTGGTCAAGGTCTGTTCTCGATTGCTTTGTCCATCTCTGGCGGACGAGA
CCGGGGGGAAAGCGGGTGCGATTGGCGGTGCATCAGAGGATGGCAACGCG
CTAGTGCCAAGCAAGGGAGTCACGGCCGGTAGTGCGCTAGATGTTTTGGA
CGCATTGGAGGCGTGCTTTCCAACAAAGAAGTATCACTCTGCTCGTACCT
GGTCAAGGTCTGTTCTCGATTGCTTTGTCCATCTCTGGCGGACGAGACCG
GGGGGAAAGCGGGTGCGATTGGCGGTGCATCAGAGGATGGCAACGCGCTA
GTGCCAAGCAAGGGAGTCACGGCCGGTAGTGCGCTAGATGTTTTGGACGC
ATTGGAGGCGTGCTTTCCAACAAAGCATGAGTCGTGGTGGGCATACGAGC
TGTGCTTGTCCACCGGAATCCGCCAGTTTCGCAAGGAGCAGAGTCGGAAA
CCCGACGGGAGCGTGGGTGCCGTAGTGTCGGCATGAGTCGTGGTGGGCAT
ACGAGCTGTGCTTGTCCACCGGAATCCGCCAGTTTCGCAAGGAGCAGAGT
CGGAAACCCGACGGGAGCGTGGGTGCCGTAGTGTCGGCGGAATTTTCCCT
AGGAAAATTCGATCGGTCGAGCGTAGAGGGCACAGGAGAGGAGCTGTTTC
GTCCGGGGATGGAAGGAGAGGAAGGCGCCATAGTTTTAGAGGCGGAATTT
TCCCTAGGAAAATTCGATCGGTCGAGCGTAGAGGGCACAGGAGAGGAGCT
GTTTCGTCCGGGGATGGAAGGAGAGGAAGGCGCCATAGTTTTAGAGTTCA
CGGGGGGCACCGAGTGTGACCTTACGAACGAGCTTCGATCAACTACGGTA
TATCTCAAGTGCGGTAACATGGAGTCAATCTCGGAAGTGGTTGAAGAGTA
TACGTGCCACTATAGACTTGTCGCTGTGTCACCTCTCCTCTGCAGTTCAC
GGGGGGCACCGAGTGTGACCTTACGAACGAGCTTCGATCAACTACGGTAT
ATCTCAAGTGCGGTAACATGGAGTCAATCTCGGAAGTGGTTGAAGAGTAT
ACGTGCCACTATAGACTTGTCGCTGTGTCACCTCTCCTCTGCAGGCACCC
GGCGCTGATGCCCAAACTAGCTCCTGTACGCACTGTGGAATGCGTCCCTA
AGCAAGGACACAAAAAGAAACGTGGCTCATATTGGCCGATTAGTTAGGCA
CCCGGCGCTGATGCCCAAACTAGCTCCTGTACGCACTGTGGAATGCGTCC
CTAAGCAAGGACACAAAAAGAAACGTGGCTCATATTGGCCGATTAGTTAG
back to top