mRNA_H-paniculata_contig1490.2920.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1490.2920.1 vs. uniprot
Match: A0A6H5KXI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI0_9PHAE) HSP 1 Score: 619 bits (1597), Expect = 1.030e-208 Identity = 436/811 (53.76%), Postives = 491/811 (60.54%), Query Frame = 2 Query: 209 RHCSKIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMSTASVDAALLVDQHIVDNXXXXXXXXXXXXXXXXXXS--SSLTASPLLQPSQGGWDGGLGMEGYALRGVPDQQRTRSNSTVSAGSMGGLAGLDGASVASKIFVGGLHYETRDASLQSYFEQYGPVTTAEVMFNRETHKSRGFGFVVFENEESANAVLQSTHHTVNGKVVEVKRAVPRSQSSTGGSNPSSPAMMGYPPSPSALGPGTAGSALLTKSSAAVAAAPKRTQRTRTV----------RDPMVTSNGGAGHVQPGASPQQRSAYPSTASYAAVLRFGAGRQQQANVGPSGGGKPPQHH------------GHAQGRDDIGNFRLHSSHETF-PPSATARAQAAAAHAFVQELKAWDVENPGGGLNFDDSFDYYAE-------------QRVASRDYSSHVDMGGA----DGSYSTG-QGSSTW-PGPXXXXGPTSSRAWTQSSGQGGANRQQGLRHT----------ADPTRVPTHTSRVEDISARYGGQYPTFQRPSEAGL-----GSESADHLYPS-GIAPNGED-YHNGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALSEAHSTRLLSPGEGGGTPALMGSSPLRADVSLLDTVFADLSLDGNQQMGLNPSLAEGGVPNGDGPSLLSGLGGG-PPSASSEVLPYGRAGGETAVDGGSGADGLVGSGSWRADAFGSALGVNVVSTASEARGRGTLNEGKD-MRVGGVGDQFLSGLGAAG 2452 R KIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYM++ASVDAAL V QHIVDN L SP +Q SQ WD ME YALRGV + RTRSNSTVSA SMGGL LDG +A+KIFVGGLHYETRDASLQ+YFEQ+GPV TAEVMFNRETHKSRGFGFVVFE+EESANAVLQS+HHTVNGKVVEVKRAVPR+QSSTGGSNPSSPAMMGYPPSPSALGPG G + +SAA RD MV N GA PG +P QR YP T SYAAVLRFGAGRQQQ G PQH G Q R+++ +FRLH SH +F PPSA ARA+AAAAHAFVQELKAWDVENPG GL+F++ DYY+E S ++++ + GA +GSY G GS TW PGP AW Q G RQ D TR+ H SRVED+S R+ + TF + G ++ HL S G A NG+ YHNGH XXXXXXXXXXXXXX AL+EA + ++ SPGE GGTPALMGSSPL LL+T FADL LDG NP+ NGDGPS+LSG+GGG PPSASSE LPYGRAGG TAVDGG G++GL S WRADAFGSALGV+V T E G ++E KD M V G+G++F+ G G Sbjct: 6 RRSVKIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMNSASVDAALSVKQHIVDNRRVEAKRAVPRSEVPPKVEPQQQLAQSPSIQ-SQNSWDPPFAMESYALRGVTAEGRTRSNSTVSASSMGGLITLDGVPMATKIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPAMMGYPPSPSALGPGMGGGPMNKPASAAXXXXXXXXXXXXXXXXXXXXXXXXRDNMVGPNNGA---VPG-TPPQRPRYPPTTSYAAVLRFGAGRQQQHQQHT---GSVPQHXXXXXXXXXXXXXGLMQAREEMASFRLHGSHSSFLPPSAAARAEAAAAHAFVQELKAWDVENPGQGLSFEEPLDYYSELPQXXXXXXXXXXXXXPSMEFNTRTETSGAGGSNNGSYGNGVTGSVTWRPGPGNGQPSAQRAAWAQHGQAGSTIRQXXXXXXXXXXXAHGPPGDATRLLAHNSRVEDVSPRHSDNFSTFSHHEDGTAAACPDGIDTHTHLSISTGAAQNGDGGYHNGHGQXXXXXXXXXXXXXXA------------------------------------------ALNEAPNGKMTSPGEAGGTPALMGSSPLLGSNGLLETAFADLKLDGP-----NPNQ------NGDGPSMLSGIGGGGPPSASSEALPYGRAGGGTAVDGGGGSEGLAASSVWRADAFGSALGVSVPRTVDEI-GSMPMSERKDIMGVEGLGERFMESFGTTG 754
BLAST of mRNA_H-paniculata_contig1490.2920.1 vs. uniprot
Match: D7G4R7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R7_ECTSI) HSP 1 Score: 392 bits (1007), Expect = 3.630e-126 Identity = 230/335 (68.66%), Postives = 246/335 (73.43%), Query Frame = 2 Query: 209 RHCSKIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMSTASVDAALLVDQHIVDNXXXXXXXXXXXXXXXXXXS--SSLTASPLLQPSQGGWDGGLGMEGYALRGVPDQQRTRSNSTVSAGSMGGLAGLDGASVASKIFVGGLHYETRDASLQSYFEQYGPVTTAEVMFNRETHKSRGFGFVVFENEESANAVLQSTHHTVNGKVVEVKRAVPRSQSSTGGSNPSSPAMMGYPPSPSALGPGTAGSALLTKSSAAVAAAPKRTQRTRTV-------RDPMVTSNGGAGHVQPGASPQQRSAYPSTASYAAVLRFGAGRQ 1186 R KIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYM++ASVDAAL V QHIVDN L SP LQ SQ WD ME YALRGV + RTRSNSTVSA SMGGL LDG +A+KIFVGGLHYETRDASLQ+YFEQ+GPV TAEVMFNRETHKSRGFGFVVFE+EESANAVLQS+HHTVNGKVVEVKRAVPR+QSSTGGSNPSSPA+MGYPPSPSALGPG G ++ ++AA RD MV N GA PG +P QR YP T SYAAVLRFGAGRQ Sbjct: 6 RRSVKIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMNSASVDAALSVKQHIVDNRRVEAKRAVPRSEVPPKVEPQQQLAQSPSLQ-SQNSWDTPFAMESYALRGVTPEGRTRSNSTVSASSMGGLITLDGVPMATKIFVGGLHYETRDASLQAYFEQFGPVQTAEVMFNRETHKSRGFGFVVFESEESANAVLQSSHHTVNGKVVEVKRAVPRAQSSTGGSNPSSPALMGYPPSPSALGPGMGGGPMIKPTAAAXXXXXXXXXXXXXXXXXXXXPRDTMVGPNNGA---VPG-TPPQRPRYPPTTSYAAVLRFGAGRQ 335
BLAST of mRNA_H-paniculata_contig1490.2920.1 vs. uniprot
Match: A0A835ZB24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB24_9STRA) HSP 1 Score: 193 bits (491), Expect = 4.660e-52 Identity = 115/241 (47.72%), Postives = 141/241 (58.51%), Query Frame = 2 Query: 221 KIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMSTASVDAALLVDQHIVDNXXXXXXXXXXXXXXXXXXSSSLTASPLLQPSQGGWDGGLGMEGYALRGVPDQQ--------RTRSNSTVSAGSMGGLAGL--------DGASVA-SKIFVGGLHYETRDASLQSYFEQYGPVTTAEVMFNRETHKSRGFGFVVFENEESANAVLQSTHHTVNGKVVEVKRAVPR 892 K+FIGGLSFET+D+ L+ YF Q+G V DA+VMKD VSRRSRGFGFITY SV+ AL +HI+D + + A+ L GVP R R+ S S S DGA+ +K+FVGGLHYETRD + ++YFEQ+G V A+VMFNRETHKSRGFGFVVFE+ +SA VLQ++HHT+NGKVVEVKRAVPR Sbjct: 6 KLFIGGLSFETSDDTLRNYFRQWGMVTDAVVMKDGVSRRSRGFGFITYADPHSVEYALAQPEHIIDGRRVEAKRAVPRTDMVLASAQAAAANT-----------------QDLYGVPHDADRLDMTTLRNRAPSNASCSSXXXXXXXXXXXALPQDGAAHGGTKVFVGGLHYETRDNAFRTYFEQFGKVLAADVMFNRETHKSRGFGFVVFESADSAARVLQTSHHTINGKVVEVKRAVPR 229
BLAST of mRNA_H-paniculata_contig1490.2920.1 vs. uniprot
Match: A0A836CPN2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPN2_9STRA) HSP 1 Score: 187 bits (476), Expect = 4.160e-51 Identity = 107/234 (45.73%), Postives = 140/234 (59.83%), Query Frame = 2 Query: 221 KIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMSTASVDAALLVDQHIVDNXXXXXXXXXXXXXXXXXXSSSLTASPLLQPSQGGWDGGLGMEGYALRGV----------PDQQRTRSNSTVSAGSMGGLAGLDGASVASKIFVGGLHYETRDASLQSYFEQYGPVTTAEVMFNRETHKSRGFGFVVFENEESANAVLQSTHHTVNGKVVEVKRAVPR 892 ++F+GGL+F T+D+ LK +F+QFG V DAIVM+D VSRRSRGFGF+TY + V+ AL +HI+D + A P +G G + Y L G+ P+ T + + LA A+K+FVGGLHYETRD++ ++YFEQ+GPV A+VMFNRETHKSRGFGFV FE+ ES VL+ +HHT+ GKVVEVKRAVPR Sbjct: 4 RLFVGGLAFATSDDTLKAHFDQFGLVTDAIVMRDGVSRRSRGFGFVTYADLSCVEYALAQPEHIIDGRRV----------------EAKRAVPRTD-REGNHGPGNPHDSYRLHGMDAGQAAGMFPPEALLTTPSGSPGVAEFSPLA-------ANKLFVGGLHYETRDSTFRAYFEQFGPVLAADVMFNRETHKSRGFGFVTFEHPESVGHVLRVSHHTIGGKVVEVKRAVPR 213
BLAST of mRNA_H-paniculata_contig1490.2920.1 vs. uniprot
Match: W2RJD1_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2RJD1_PHYPN) HSP 1 Score: 187 bits (475), Expect = 2.130e-50 Identity = 109/224 (48.66%), Postives = 130/224 (58.04%), Query Frame = 2 Query: 221 KIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMSTASVDAALLVDQHIVDNXXXXXXXXXXXXXXXXXXSSSLTASPLLQPSQGGWDGGLGMEGYALRGVPDQQRTRSNSTVSAGSMGGLAGLDGASVASKIFVGGLHYETRDASLQSYFEQYGPVTTAEVMFNRETHKSRGFGFVVFENEESANAVLQSTHHTVNGKVVEVKRAVPR 892 KIFIGGLS+ETTDE L+ YF +G V DA+VMKD +SRRSRGFGFITY + VD AL HI+D S + A + ++ D G G G +NSTV A KIFVGGLHYET+DA + YF QYG V +AEVMFNRET+KSRGFGFV+FE+E S VLQ +H ++GK VEVKRAVPR Sbjct: 9 KIFIGGLSYETTDEKLRSYFGAYGTVTDAVVMKDPISRRSRGFGFITYADPSCVDRALAQPNHILD-------------------SRRVEAKRAVPRAESMRDIGSGSSSSRGNGSSSISSISANSTVGA--------------TKKIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEASVELVLQDKNHVIDGKSVEVKRAVPR 199
BLAST of mRNA_H-paniculata_contig1490.2920.1 vs. uniprot
Match: A0A8K1FFW7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFW7_PYTOL) HSP 1 Score: 195 bits (495), Expect = 4.070e-50 Identity = 112/224 (50.00%), Postives = 129/224 (57.59%), Query Frame = 2 Query: 221 KIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMSTASVDAALLVDQHIVDNXXXXXXXXXXXXXXXXXXSSSLTASPLLQPSQGGWDGGLGMEGYALRGVPDQQRTRSNSTVSAGSMGGLAGLDGASVASKIFVGGLHYETRDASLQSYFEQYGPVTTAEVMFNRETHKSRGFGFVVFENEESANAVLQSTHHTVNGKVVEVKRAVPR 892 KIFIGGLS+ETTDE L+ YF FGPV DA+VMKD +SRRSRGFGFITY + VD AL HI+DN S S T S +R+ S +S SM G KIFVGGLHYET+DA + YF+QYG V +AEVMFNRET+KSRGFGFV+FENE S VLQ H ++GK VEVKRAVPR Sbjct: 10 KIFIGGLSYETTDEKLRSYFSAFGPVTDAVVMKDPISRRSRGFGFITYADSIYVDRALAQPSHILDNRRVEAKRAVPRAESTSRDSFSSTTS-----------------------------SRNGSVISNSSMCSNVGS-----TKKIFVGGLHYETKDAEFRRYFQQYGKVVSAEVMFNRETNKSRGFGFVIFENESSVENVLQENDHVIDGKSVEVKRAVPR 199
BLAST of mRNA_H-paniculata_contig1490.2920.1 vs. uniprot
Match: A0A8J4W8W6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A8J4W8W6_9STRA) HSP 1 Score: 187 bits (476), Expect = 7.140e-50 Identity = 120/250 (48.00%), Postives = 145/250 (58.00%), Query Frame = 2 Query: 221 KIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMSTASVDAALLVDQHIVDNXXXXXXXXXXXXXXXXXXSSSLTASPLLQPSQGGWDGGLGMEGYALRGVPDQQRTRSNSTVSAGSMGGLAGLDGASVASKIFVGGLHYETRDASLQSYFEQYGPVTTAEVMFNRETHKSRGFGFVVFENEESANAVLQSTHHTVNGKVVEVKRAVPR-------SQSSTGGS--NPSSPAMMG 943 KIFIGGLS+ETTDE L+ YF +G V DA+VMKD +SRRSRGFGFITY VD AL HI+D S + A + ++ D G G P + +NS +S+ SM G KIFVGGLHYET+DA + YF QYG V +AEVMFNRET+KSRGFGFV+FE+E+S VLQ +H ++GK VEVKRAVPR S SS GGS PS P +G Sbjct: 9 KIFIGGLSYETTDEKLRAYFGAYGTVTDAVVMKDPISRRSRGFGFITYADPVCVDRALTQPNHILD-------------------SRRVEAKRAVPRAESLRDIG--------NGAPSNRGNGTNS-ISSLSMNSAVGA-----TKKIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEDSVELVLQDKNHIIDGKSVEVKRAVPRTDVPPPRSVSSRGGSFSGPSGPGSVG 225
BLAST of mRNA_H-paniculata_contig1490.2920.1 vs. uniprot
Match: A0A067BU65_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BU65_SAPPC) HSP 1 Score: 188 bits (478), Expect = 2.130e-49 Identity = 108/228 (47.37%), Postives = 134/228 (58.77%), Query Frame = 2 Query: 221 KIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMSTASVDAALLVDQHIVDNXXXXXXXXXXXXXXXXXXSSSLTASPLLQPSQGGWDGGLGMEGYALRGVPDQQRTRSNSTVSA-GSMGGLAGLDGASVAS---KIFVGGLHYETRDASLQSYFEQYGPVTTAEVMFNRETHKSRGFGFVVFENEESANAVLQSTHHTVNGKVVEVKRAVPR 892 KIFIGGLS+ETTD+ L+ YF +G V DA+VMKD +SRRSRGFGFITY A VD AL H++DN A R VP + +R S++SA G++ + + AS KIFVGGLHYET+DA ++YF+Q+G V +AEVMFNRET+KSRGFGFV+FE E S VLQ H ++GK VEVKRAVPR Sbjct: 10 KIFIGGLSYETTDDKLRAYFGAYGAVTDAVVMKDPISRRSRGFGFITYADPACVDRALAQPNHVLDNRRVE----------------------------------------AKRAVPRAESSRDTSSISARGNVSAGSSVSSASAVGATKKIFVGGLHYETKDAEFKTYFQQFGKVVSAEVMFNRETNKSRGFGFVIFETEASVELVLQDKTHVIDGKSVEVKRAVPR 197
BLAST of mRNA_H-paniculata_contig1490.2920.1 vs. uniprot
Match: A0A421GV64_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GV64_9STRA) HSP 1 Score: 187 bits (476), Expect = 6.470e-49 Identity = 120/250 (48.00%), Postives = 145/250 (58.00%), Query Frame = 2 Query: 221 KIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMSTASVDAALLVDQHIVDNXXXXXXXXXXXXXXXXXXSSSLTASPLLQPSQGGWDGGLGMEGYALRGVPDQQRTRSNSTVSAGSMGGLAGLDGASVASKIFVGGLHYETRDASLQSYFEQYGPVTTAEVMFNRETHKSRGFGFVVFENEESANAVLQSTHHTVNGKVVEVKRAVPR-------SQSSTGGS--NPSSPAMMG 943 KIFIGGLS+ETTDE L+ YF +G V DA+VMKD +SRRSRGFGFITY VD AL HI+D S + A + ++ D G G P + +NS +S+ SM G KIFVGGLHYET+DA + YF QYG V +AEVMFNRET+KSRGFGFV+FE+E+S VLQ +H ++GK VEVKRAVPR S SS GGS PS P +G Sbjct: 9 KIFIGGLSYETTDEKLRAYFGAYGTVTDAVVMKDPISRRSRGFGFITYADPVCVDRALTQPNHILD-------------------SRRVEAKRAVPRAESLRDIG--------NGAPSNRGNGTNS-ISSLSMNSAVGA-----TKKIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEDSVELVLQDKNHIIDGKSVEVKRAVPRTDVPPPRSVSSRGGSFSGPSGPGSVG 225
BLAST of mRNA_H-paniculata_contig1490.2920.1 vs. uniprot
Match: A0A1V9YG10_9STRA (Heterogeneous nuclear ribonucleoprotein A1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YG10_9STRA) HSP 1 Score: 187 bits (476), Expect = 3.390e-48 Identity = 111/230 (48.26%), Postives = 131/230 (56.96%), Query Frame = 2 Query: 221 KIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRRSRGFGFITYMSTASVDAALLVDQHIVDNXXXXXXXXXXXXXXXXXXSSSLTASPLLQPSQGGWDGGLGMEGYALRGVPDQQRTRSNST------VSAGSMGGLAGLDGASVASKIFVGGLHYETRDASLQSYFEQYGPVTTAEVMFNRETHKSRGFGFVVFENEESANAVLQSTHHTVNGKVVEVKRAVPR 892 KIFIGGLS+ETTD+ L+ YF +G V DA+VMKD +SRRSRGFGFITY A VD AL H++DN A R VP + R S+ VSAGS A GA+ KIFVGGLHYET+DA + YF+Q+G V +AEVMFNRET+KSRGFGFV+FE E S VLQ H ++GK VEVKRAVPR Sbjct: 10 KIFIGGLSYETTDDKLRSYFSAYGTVTDAVVMKDPISRRSRGFGFITYADPACVDRALAQPNHVLDNRRVE----------------------------------------AKRAVPRAESNRDTSSISTRGNVSAGSSVSSASAVGAT--KKIFVGGLHYETKDADFKKYFQQFGKVVSAEVMFNRETNKSRGFGFVIFETEASVELVLQDKTHVIDGKSVEVKRAVPR 197 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1490.2920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1490.2920.1 >prot_H-paniculata_contig1490.2920.1 ID=prot_H-paniculata_contig1490.2920.1|Name=mRNA_H-paniculata_contig1490.2920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=756bp MYNNVLRNRHCSKIFIGGLSFETTDEALKRYFEQFGPVADAIVMKDAVSRback to top mRNA from alignment at H-paniculata_contig1490:9744..14915- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1490.2920.1 ID=mRNA_H-paniculata_contig1490.2920.1|Name=mRNA_H-paniculata_contig1490.2920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5172bp|location=Sequence derived from alignment at H-paniculata_contig1490:9744..14915- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1490:9744..14915- >mRNA_H-paniculata_contig1490.2920.1 ID=mRNA_H-paniculata_contig1490.2920.1|Name=mRNA_H-paniculata_contig1490.2920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4536bp|location=Sequence derived from alignment at H-paniculata_contig1490:9744..14915- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |