mRNA_H-paniculata_contig1490.2919.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: D7G4R6_ECTSI (Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R6_ECTSI) HSP 1 Score: 446 bits (1146), Expect = 2.170e-149 Identity = 224/290 (77.24%), Postives = 256/290 (88.28%), Query Frame = 3 Query: 498 RSLRLSSIPMPVMA--------SPLAASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343 +SL++S+ PV+A S +A++PS+KPPP MYQNAV IG+KKA+ AK+F MGIISGCHI GALLAV++GG+CPGL +TNPGLQKI+FGAFGLPFGLFMTVVGGGELFTGNTAVVTAA IEGKAS GGLLKNW+FSY+GNF+GSLL+V+LA+ G V NP +AMGIA+ KTSLTF+QAF RG+LCNWLVCMAVWMS+SASDA GKF AIFLPISAFVA+GLDHSVANMFLIPLGMALGAGV+W QFL+ANLLPVTLGNIVGGAVAVCGLYS AFGSLFGK+K Sbjct: 55 KSLKMSTAAAPVVAGGSTTAPVSAVASAPSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKKK 344
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A6U5HVT6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HVT6_9STRA) HSP 1 Score: 326 bits (836), Expect = 5.200e-103 Identity = 164/264 (62.12%), Postives = 200/264 (75.76%), Query Frame = 3 Query: 549 AASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQ 1340 A P++KPP +YQ AV G KA+ P KIF +GI+SG HIA GA LAVTVGG+CPGLAS+NPGLQKI+FG+FGLPFGL MT++ GGELFTGNTA+VTAA EGK S L+KNW SY+GNF+GSLL+ YLA T G + + + IA+ K S+ FL AF RG+LCNWLVCMAV+M+ S GK A++ PISAFVA+GLDHS+ANMFLIPLGM GA V+ Q M NL+PVTLGNIVGGA+ V G + +AFG+ F K+ Sbjct: 69 APPPALKPPASLYQGAVAAGAAKASAPFGKIFKLGIVSGAHIAFGAFLAVTVGGACPGLASSNPGLQKIIFGSFGLPFGLIMTLITGGELFTGNTALVTAAYAEGKTSMSDLIKNWSASYLGNFVGSLLLAYLAYTGGTLGSAPASAAIATAKCSMPFLTAFVRGILCNWLVCMAVYMASGISTMGGKMVAVYFPISAFVALGLDHSIANMFLIPLGMMRGAEVTIAQMFMKNLIPVTLGNIVGGALCVAGGFGSAFGNWFEKK 332
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A835YP49_9STRA (Nitrite transporter NAR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP49_9STRA) HSP 1 Score: 319 bits (818), Expect = 2.590e-100 Identity = 167/257 (64.98%), Postives = 199/257 (77.43%), Query Frame = 3 Query: 576 PDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQKA 1346 P +YQNAV +G KKAAMP KI T+GI+SGCHI GALLAVTVGG+ P +A+ NPG QK L GA GLPFGLFMT+VGGGELFTGNTA+VTAA +E +AS GLLK+W SY+GNFLGSLL+ +A+ AG ++ PA G+A K ++ +Q+F RG+LCNWLVCMAV+MS ASDA GK AIFLPISAFVA+G DH VANMFL+P M +GA + +FL +LLPVTLGNIVGGA AV G+YS AFGS G KA Sbjct: 77 PALYQNAVELGAKKAAMPINKILTLGILSGCHIGFGALLAVTVGGNVPEMAAANPGAQKFLLGAVGLPFGLFMTLVGGGELFTGNTALVTAALLEKRASLKGLLKSWSISYLGNFLGSLLLAAIAVNAGIIAVPAL-KGVACAKAAVYPVQSFFRGLLCNWLVCMAVYMSAGASDAGGKLAAIFLPISAFVALGTDHCVANMFLLPAAMMVGADIGLGRFLFGHLLPVTLGNIVGGAAAVAGMYSLAFGS--GGAKA 330
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A7S0GAY3_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAY3_9STRA) HSP 1 Score: 314 bits (804), Expect = 1.380e-98 Identity = 160/264 (60.61%), Postives = 192/264 (72.73%), Query Frame = 3 Query: 552 ASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343 A P +K PP +Y AV G KA PA KIFT+GI+SG HIA GA LA+ VGG+CP +A+ NPGLQKI+FGAFGLPFGL MT+V G ELFTGNTA+VTAA +EGK +T L+K+W+ SY+GNF+GSLL+ YLA G + N A IA+ K SL F AF RG+LCNWLVCMAV M+ S GK A++ PISAFVA+GLDHSVANMFLIPLGM GA ++ + NL+PVTLGNIVGGAV V Y FGS F K++ Sbjct: 47 AVPELKAPPALYAGAVAAGTAKALAPAEKIFTLGIVSGAHIAFGAFLALAVGGACPEIAAANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAARMEGKITTKDLIKSWVSSYLGNFVGSLLLAYLAFNGGTLGNGPAAAAIATAKCSLPFKVAFIRGILCNWLVCMAVLMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFLIPLGMMRGAEITIADMFIKNLIPVTLGNIVGGAVCVMAPYGKTFGSWFSKKE 310
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A7S2UWW2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWW2_9STRA) HSP 1 Score: 309 bits (792), Expect = 8.720e-97 Identity = 163/311 (52.41%), Postives = 211/311 (67.85%), Query Frame = 3 Query: 411 ISSKTFSFGNSIGVHATDFASPRAGYAPQRSLRLSSIPMPVMASPLAASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343 IS F FG + FASP A R S++ M + +P +KPPP +Y+ AV G KA+ AKIF +GI+SGCHI GA LA+++GG+CP +A+ NPG+QK++ GAFGLPFGL MT+ GGELFTGNTA+VTAA +EGK + L KNWI SY+GNF+GSL++ YLA +G + + A+ IA+ K SL F AF RG+LCNWLVCMAV+M+ S GK A++ PISAFVA+GLDHSVANMF+IPLGM GA ++ Q + NL+PVTLGNIVGGA+ V + FG F K++ Sbjct: 2 ISKLIFIFGL-LASSVAAFASPAAPAPSLARQRHSTLLMNALDVRGGQAPELKPPPALYEGAVAAGAAKASGSWAKIFKLGIVSGCHIGFGAYLAISIGGACPQIAAANPGVQKMILGAFGLPFGLIMTLATGGELFTGNTALVTAAVLEGKTTKKDLAKNWISSYLGNFVGSLILAYLAFKSGTLGDLPGAVNIATAKVSLPFTVAFVRGILCNWLVCMAVYMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFIIPLGMLRGADITIGQMFLKNLIPVTLGNIVGGALCVMAPFGTTFGKWFQKKE 311
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: B8BXN4_THAPS (Formate/nitrite transporter family member n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXN4_THAPS) HSP 1 Score: 307 bits (787), Expect = 1.270e-96 Identity = 154/270 (57.04%), Postives = 196/270 (72.59%), Query Frame = 3 Query: 534 MASPLAASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343 M+ + P +K PP +Y+ AV G KA+ KIF +GI +GCHI G+ LA+TVGG+CP +A NPGLQKI+FGAFGLPFGL MT+V G ELFTGNTA+VTAA +EGK +T L+KNW+ SY GN +GSL++ YLA +G + N ++ IA+ K SL F AF RG+LCNWLVCMAV+M+ + GK A++ PISAFVA+GLDHSVANMF+IPLGM GA ++ F+ NL+PVTLGNIVGGA+ V G+Y +AFG F K K Sbjct: 1 MSGGASVVPDLKAPPAIYEGAVAAGAAKASASWEKIFKLGIAAGCHIGFGSYLAITVGGACPQIAEANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAAVMEGKTTTKDLIKNWVASYAGNVVGSLILAYLAFKSGTLGNAPASVAIATAKCSLPFETAFVRGILCNWLVCMAVYMASGCASLAGKMVAVWFPISAFVALGLDHSVANMFIIPLGMMRGAQITVGDFITKNLIPVTLGNIVGGALCVMGIYGSAFGKWF-KSK 269
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A8J9ST54_9CHLO (Probable formate transporter 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9ST54_9CHLO) HSP 1 Score: 307 bits (787), Expect = 1.030e-95 Identity = 154/257 (59.92%), Postives = 197/257 (76.65%), Query Frame = 3 Query: 558 PSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSL 1328 P + PPP + A+ G+ KAA+ +K F MGI+ G I G+ LA++VGG+CPGLASTNPGLQKI++GAFGLPFGL + ++ G ELFTGNTA+VTA+ +EGKAS L KNW FSY+GNF GSLL+V L ++ G ++ A + +A KTSLTF QAF+RG+LCNWLV AV+M+ +AS A GK A++ PISAFVA+GL+HSVANMF++PLG+ALGA VS+ FL ANLLPVTLGNIVGGAV + Y+A FG + Sbjct: 73 PELSPPPAAFAKAIAAGQSKAALSISKTFFMGILGGAFIGFGSFLALSVGGACPGLASTNPGLQKIVYGAFGLPFGLLLVLMCGAELFTGNTALVTASVLEGKASLEQLAKNWFFSYLGNFAGSLLMVTLVVSTGLLATAAAPLNVAVAKTSLTFAQAFSRGILCNWLVSAAVYMANAASSAPGKAVAVWFPISAFVALGLEHSVANMFMVPLGIALGAKVSFATFLTANLLPVTLGNIVGGAVCIALAYAACFGKM 329
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A0M0J4X1_9EUKA (Nitrite transporter nar1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J4X1_9EUKA) HSP 1 Score: 305 bits (781), Expect = 3.420e-95 Identity = 161/297 (54.21%), Postives = 207/297 (69.70%), Query Frame = 3 Query: 450 VHATDFASPRAGYAPQRSLRLSSIPMPVMASPLAASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQ 1340 +HA D +S PQ +S+ + A +AA P + P D + AV GEKKA MPA KIF +GI+SG HI GA L +++GG+CPGLA+TNPGLQKI+ GAFGLPFGL MT++ GGELFTGNTA+VT A +EGKA+ G L+K+W S+ GNF+GS+L+ L +S ++ +++ KTSLTF QAF RGVLCNWLV MAV+++ A D GK I+ ISAFVA+GL+HS+ANMF+IPLG+ GA VSWP FL+ NLLPVTLGN GGAV V + A+G L K+ Sbjct: 13 MHALDMSSAPFLQRPQLGAHRASM-LIAQAGAVAAPPLLALPLDGFNGAVAAGEKKANMPADKIFHLGILSGAHIGFGAFLMLSIGGACPGLAATNPGLQKIVLGAFGLPFGLMMTLLSGGELFTGNTALVTMALLEGKATMGQLIKSWSASFAGNFVGSVLLAVLVFYGNTLSGGGASIAVSAAKTSLTFTQAFVRGVLCNWLVTMAVYLASFAKDTAGKMVPIWFCISAFVALGLEHSIANMFIIPLGIFSGASVSWPTFLLKNLLPVTLGNTFGGAVCVALAFCMAYGKLSKKE 308
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A448ZQ46_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ46_9STRA) HSP 1 Score: 305 bits (781), Expect = 4.030e-95 Identity = 155/263 (58.94%), Postives = 195/263 (74.14%), Query Frame = 3 Query: 555 SPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343 +P +KPPP +YQ AV G KA+ IF +GI+SGCHIA GA LA+TVGG+C G+A+ NPGLQKI+FG+FGLPFGL MT+V GGELFTGNTA+VTAA EGK S L+KNW+ SY GN +GSLL+ YLA +G ++ + IA+ K SL + AF RG+LCNWLVCMAV+M+ + GK A++ PISAFVA+GLDHSVANMF+IPLGM GA ++ FLM NL+PVTLGNIVGGA+ V + + FGS +GK+ Sbjct: 51 APELKPPPSLYQGAVAAGVGKASKTWGDIFKLGIVSGCHIAFGAYLAITVGGACSGIAAENPGLQKIIFGSFGLPFGLIMTLVTGGELFTGNTALVTAAYKEGKISGKDLIKNWVSSYTGNLVGSLLLAYLAYKSGTLAASPASAAIATAKCSLPWDVAFVRGILCNWLVCMAVYMASGCASMAGKMTAVYFPISAFVALGLDHSVANMFIIPLGMLRGADITIKAFLMKNLIPVTLGNIVGGALCVMAPFGSVFGS-WGKKS 312
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A1E7F978_9STRA (Form_Nir_trans-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F978_9STRA) HSP 1 Score: 305 bits (781), Expect = 4.920e-95 Identity = 154/263 (58.56%), Postives = 195/263 (74.14%), Query Frame = 3 Query: 555 SPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343 +P +KPP +YQ AV G KA+ IF +GI+SGCHIA GA LA+TVGG+CPG+A+ NPGLQKI+FG+FGLPFGL MT+V GGELFTGNTA+VTAA EGK L+KNW+ SY GNF+GSLL+ YLA +G +++ + IA+ K SL + AF RG+LCNWLVCMAV+M+ + GK A++ PISAFVA+GLDHSVANMF+IPLGM GA ++ FL NL+PVTLGNIVGGA+ V + FG+ +GK+K Sbjct: 56 TPELKPPAALYQGAVAAGVAKASKSWIDIFKLGIVSGCHIAFGAYLAITVGGACPGIAAENPGLQKIIFGSFGLPFGLIMTLVTGGELFTGNTALVTAAYKEGKIEGKALIKNWVASYAGNFVGSLLLAYLAFKSGTLASGPASAAIATAKCSLPWDVAFVRGILCNWLVCMAVYMASGCTSMIGKMTAVYFPISAFVALGLDHSVANMFIIPLGMLRGAEITTQAFLFKNLIPVTLGNIVGGALCVMAPFGDVFGT-WGKKK 317 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1490.2919.1 >prot_H-paniculata_contig1490.2919.1 ID=prot_H-paniculata_contig1490.2919.1|Name=mRNA_H-paniculata_contig1490.2919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=342bp MSEAMARVIVPLVLAVACLTQGTDGFVRPISSKTFSFGNSIGVHATDFASback to top mRNA from alignment at H-paniculata_contig1490:1295..5535+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1490.2919.1 ID=mRNA_H-paniculata_contig1490.2919.1|Name=mRNA_H-paniculata_contig1490.2919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4241bp|location=Sequence derived from alignment at H-paniculata_contig1490:1295..5535+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1490:1295..5535+ >mRNA_H-paniculata_contig1490.2919.1 ID=mRNA_H-paniculata_contig1490.2919.1|Name=mRNA_H-paniculata_contig1490.2919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2052bp|location=Sequence derived from alignment at H-paniculata_contig1490:1295..5535+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |