mRNA_H-paniculata_contig1490.2919.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1490.2919.1
Unique NamemRNA_H-paniculata_contig1490.2919.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: D7G4R6_ECTSI (Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R6_ECTSI)

HSP 1 Score: 446 bits (1146), Expect = 2.170e-149
Identity = 224/290 (77.24%), Postives = 256/290 (88.28%), Query Frame = 3
Query:  498 RSLRLSSIPMPVMA--------SPLAASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343
            +SL++S+   PV+A        S +A++PS+KPPP MYQNAV IG+KKA+   AK+F MGIISGCHI  GALLAV++GG+CPGL +TNPGLQKI+FGAFGLPFGLFMTVVGGGELFTGNTAVVTAA IEGKAS GGLLKNW+FSY+GNF+GSLL+V+LA+  G V NP +AMGIA+ KTSLTF+QAF RG+LCNWLVCMAVWMS+SASDA GKF AIFLPISAFVA+GLDHSVANMFLIPLGMALGAGV+W QFL+ANLLPVTLGNIVGGAVAVCGLYS AFGSLFGK+K
Sbjct:   55 KSLKMSTAAAPVVAGGSTTAPVSAVASAPSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKKK 344          
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A6U5HVT6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HVT6_9STRA)

HSP 1 Score: 326 bits (836), Expect = 5.200e-103
Identity = 164/264 (62.12%), Postives = 200/264 (75.76%), Query Frame = 3
Query:  549 AASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQ 1340
            A  P++KPP  +YQ AV  G  KA+ P  KIF +GI+SG HIA GA LAVTVGG+CPGLAS+NPGLQKI+FG+FGLPFGL MT++ GGELFTGNTA+VTAA  EGK S   L+KNW  SY+GNF+GSLL+ YLA T G + +   +  IA+ K S+ FL AF RG+LCNWLVCMAV+M+   S   GK  A++ PISAFVA+GLDHS+ANMFLIPLGM  GA V+  Q  M NL+PVTLGNIVGGA+ V G + +AFG+ F K+
Sbjct:   69 APPPALKPPASLYQGAVAAGAAKASAPFGKIFKLGIVSGAHIAFGAFLAVTVGGACPGLASSNPGLQKIIFGSFGLPFGLIMTLITGGELFTGNTALVTAAYAEGKTSMSDLIKNWSASYLGNFVGSLLLAYLAYTGGTLGSAPASAAIATAKCSMPFLTAFVRGILCNWLVCMAVYMASGISTMGGKMVAVYFPISAFVALGLDHSIANMFLIPLGMMRGAEVTIAQMFMKNLIPVTLGNIVGGALCVAGGFGSAFGNWFEKK 332          
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A835YP49_9STRA (Nitrite transporter NAR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP49_9STRA)

HSP 1 Score: 319 bits (818), Expect = 2.590e-100
Identity = 167/257 (64.98%), Postives = 199/257 (77.43%), Query Frame = 3
Query:  576 PDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQKA 1346
            P +YQNAV +G KKAAMP  KI T+GI+SGCHI  GALLAVTVGG+ P +A+ NPG QK L GA GLPFGLFMT+VGGGELFTGNTA+VTAA +E +AS  GLLK+W  SY+GNFLGSLL+  +A+ AG ++ PA   G+A  K ++  +Q+F RG+LCNWLVCMAV+MS  ASDA GK  AIFLPISAFVA+G DH VANMFL+P  M +GA +   +FL  +LLPVTLGNIVGGA AV G+YS AFGS  G  KA
Sbjct:   77 PALYQNAVELGAKKAAMPINKILTLGILSGCHIGFGALLAVTVGGNVPEMAAANPGAQKFLLGAVGLPFGLFMTLVGGGELFTGNTALVTAALLEKRASLKGLLKSWSISYLGNFLGSLLLAAIAVNAGIIAVPAL-KGVACAKAAVYPVQSFFRGLLCNWLVCMAVYMSAGASDAGGKLAAIFLPISAFVALGTDHCVANMFLLPAAMMVGADIGLGRFLFGHLLPVTLGNIVGGAAAVAGMYSLAFGS--GGAKA 330          
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A7S0GAY3_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAY3_9STRA)

HSP 1 Score: 314 bits (804), Expect = 1.380e-98
Identity = 160/264 (60.61%), Postives = 192/264 (72.73%), Query Frame = 3
Query:  552 ASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343
            A P +K PP +Y  AV  G  KA  PA KIFT+GI+SG HIA GA LA+ VGG+CP +A+ NPGLQKI+FGAFGLPFGL MT+V G ELFTGNTA+VTAA +EGK +T  L+K+W+ SY+GNF+GSLL+ YLA   G + N   A  IA+ K SL F  AF RG+LCNWLVCMAV M+   S   GK  A++ PISAFVA+GLDHSVANMFLIPLGM  GA ++     + NL+PVTLGNIVGGAV V   Y   FGS F K++
Sbjct:   47 AVPELKAPPALYAGAVAAGTAKALAPAEKIFTLGIVSGAHIAFGAFLALAVGGACPEIAAANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAARMEGKITTKDLIKSWVSSYLGNFVGSLLLAYLAFNGGTLGNGPAAAAIATAKCSLPFKVAFIRGILCNWLVCMAVLMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFLIPLGMMRGAEITIADMFIKNLIPVTLGNIVGGAVCVMAPYGKTFGSWFSKKE 310          
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A7S2UWW2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWW2_9STRA)

HSP 1 Score: 309 bits (792), Expect = 8.720e-97
Identity = 163/311 (52.41%), Postives = 211/311 (67.85%), Query Frame = 3
Query:  411 ISSKTFSFGNSIGVHATDFASPRAGYAPQRSLRLSSIPMPVMASPLAASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343
            IS   F FG  +      FASP A        R S++ M  +      +P +KPPP +Y+ AV  G  KA+   AKIF +GI+SGCHI  GA LA+++GG+CP +A+ NPG+QK++ GAFGLPFGL MT+  GGELFTGNTA+VTAA +EGK +   L KNWI SY+GNF+GSL++ YLA  +G + +   A+ IA+ K SL F  AF RG+LCNWLVCMAV+M+   S   GK  A++ PISAFVA+GLDHSVANMF+IPLGM  GA ++  Q  + NL+PVTLGNIVGGA+ V   +   FG  F K++
Sbjct:    2 ISKLIFIFGL-LASSVAAFASPAAPAPSLARQRHSTLLMNALDVRGGQAPELKPPPALYEGAVAAGAAKASGSWAKIFKLGIVSGCHIGFGAYLAISIGGACPQIAAANPGVQKMILGAFGLPFGLIMTLATGGELFTGNTALVTAAVLEGKTTKKDLAKNWISSYLGNFVGSLILAYLAFKSGTLGDLPGAVNIATAKVSLPFTVAFVRGILCNWLVCMAVYMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFIIPLGMLRGADITIGQMFLKNLIPVTLGNIVGGALCVMAPFGTTFGKWFQKKE 311          
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: B8BXN4_THAPS (Formate/nitrite transporter family member n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXN4_THAPS)

HSP 1 Score: 307 bits (787), Expect = 1.270e-96
Identity = 154/270 (57.04%), Postives = 196/270 (72.59%), Query Frame = 3
Query:  534 MASPLAASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343
            M+   +  P +K PP +Y+ AV  G  KA+    KIF +GI +GCHI  G+ LA+TVGG+CP +A  NPGLQKI+FGAFGLPFGL MT+V G ELFTGNTA+VTAA +EGK +T  L+KNW+ SY GN +GSL++ YLA  +G + N   ++ IA+ K SL F  AF RG+LCNWLVCMAV+M+   +   GK  A++ PISAFVA+GLDHSVANMF+IPLGM  GA ++   F+  NL+PVTLGNIVGGA+ V G+Y +AFG  F K K
Sbjct:    1 MSGGASVVPDLKAPPAIYEGAVAAGAAKASASWEKIFKLGIAAGCHIGFGSYLAITVGGACPQIAEANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAAVMEGKTTTKDLIKNWVASYAGNVVGSLILAYLAFKSGTLGNAPASVAIATAKCSLPFETAFVRGILCNWLVCMAVYMASGCASLAGKMVAVWFPISAFVALGLDHSVANMFIIPLGMMRGAQITVGDFITKNLIPVTLGNIVGGALCVMGIYGSAFGKWF-KSK 269          
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A8J9ST54_9CHLO (Probable formate transporter 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9ST54_9CHLO)

HSP 1 Score: 307 bits (787), Expect = 1.030e-95
Identity = 154/257 (59.92%), Postives = 197/257 (76.65%), Query Frame = 3
Query:  558 PSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSL 1328
            P + PPP  +  A+  G+ KAA+  +K F MGI+ G  I  G+ LA++VGG+CPGLASTNPGLQKI++GAFGLPFGL + ++ G ELFTGNTA+VTA+ +EGKAS   L KNW FSY+GNF GSLL+V L ++ G ++  A  + +A  KTSLTF QAF+RG+LCNWLV  AV+M+ +AS A GK  A++ PISAFVA+GL+HSVANMF++PLG+ALGA VS+  FL ANLLPVTLGNIVGGAV +   Y+A FG +
Sbjct:   73 PELSPPPAAFAKAIAAGQSKAALSISKTFFMGILGGAFIGFGSFLALSVGGACPGLASTNPGLQKIVYGAFGLPFGLLLVLMCGAELFTGNTALVTASVLEGKASLEQLAKNWFFSYLGNFAGSLLMVTLVVSTGLLATAAAPLNVAVAKTSLTFAQAFSRGILCNWLVSAAVYMANAASSAPGKAVAVWFPISAFVALGLEHSVANMFMVPLGIALGAKVSFATFLTANLLPVTLGNIVGGAVCIALAYAACFGKM 329          
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A0M0J4X1_9EUKA (Nitrite transporter nar1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J4X1_9EUKA)

HSP 1 Score: 305 bits (781), Expect = 3.420e-95
Identity = 161/297 (54.21%), Postives = 207/297 (69.70%), Query Frame = 3
Query:  450 VHATDFASPRAGYAPQRSLRLSSIPMPVMASPLAASPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQ 1340
            +HA D +S      PQ     +S+ +   A  +AA P +  P D +  AV  GEKKA MPA KIF +GI+SG HI  GA L +++GG+CPGLA+TNPGLQKI+ GAFGLPFGL MT++ GGELFTGNTA+VT A +EGKA+ G L+K+W  S+ GNF+GS+L+  L      +S    ++ +++ KTSLTF QAF RGVLCNWLV MAV+++  A D  GK   I+  ISAFVA+GL+HS+ANMF+IPLG+  GA VSWP FL+ NLLPVTLGN  GGAV V   +  A+G L  K+
Sbjct:   13 MHALDMSSAPFLQRPQLGAHRASM-LIAQAGAVAAPPLLALPLDGFNGAVAAGEKKANMPADKIFHLGILSGAHIGFGAFLMLSIGGACPGLAATNPGLQKIVLGAFGLPFGLMMTLLSGGELFTGNTALVTMALLEGKATMGQLIKSWSASFAGNFVGSVLLAVLVFYGNTLSGGGASIAVSAAKTSLTFTQAFVRGVLCNWLVTMAVYLASFAKDTAGKMVPIWFCISAFVALGLEHSIANMFIIPLGIFSGASVSWPTFLLKNLLPVTLGNTFGGAVCVALAFCMAYGKLSKKE 308          
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A448ZQ46_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ46_9STRA)

HSP 1 Score: 305 bits (781), Expect = 4.030e-95
Identity = 155/263 (58.94%), Postives = 195/263 (74.14%), Query Frame = 3
Query:  555 SPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343
            +P +KPPP +YQ AV  G  KA+     IF +GI+SGCHIA GA LA+TVGG+C G+A+ NPGLQKI+FG+FGLPFGL MT+V GGELFTGNTA+VTAA  EGK S   L+KNW+ SY GN +GSLL+ YLA  +G ++    +  IA+ K SL +  AF RG+LCNWLVCMAV+M+   +   GK  A++ PISAFVA+GLDHSVANMF+IPLGM  GA ++   FLM NL+PVTLGNIVGGA+ V   + + FGS +GK+ 
Sbjct:   51 APELKPPPSLYQGAVAAGVGKASKTWGDIFKLGIVSGCHIAFGAYLAITVGGACSGIAAENPGLQKIIFGSFGLPFGLIMTLVTGGELFTGNTALVTAAYKEGKISGKDLIKNWVSSYTGNLVGSLLLAYLAYKSGTLAASPASAAIATAKCSLPWDVAFVRGILCNWLVCMAVYMASGCASMAGKMTAVYFPISAFVALGLDHSVANMFIIPLGMLRGADITIKAFLMKNLIPVTLGNIVGGALCVMAPFGSVFGS-WGKKS 312          
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Match: A0A1E7F978_9STRA (Form_Nir_trans-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F978_9STRA)

HSP 1 Score: 305 bits (781), Expect = 4.920e-95
Identity = 154/263 (58.56%), Postives = 195/263 (74.14%), Query Frame = 3
Query:  555 SPSIKPPPDMYQNAVTIGEKKAAMPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFLGSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMAVWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVSWPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQK 1343
            +P +KPP  +YQ AV  G  KA+     IF +GI+SGCHIA GA LA+TVGG+CPG+A+ NPGLQKI+FG+FGLPFGL MT+V GGELFTGNTA+VTAA  EGK     L+KNW+ SY GNF+GSLL+ YLA  +G +++   +  IA+ K SL +  AF RG+LCNWLVCMAV+M+   +   GK  A++ PISAFVA+GLDHSVANMF+IPLGM  GA ++   FL  NL+PVTLGNIVGGA+ V   +   FG+ +GK+K
Sbjct:   56 TPELKPPAALYQGAVAAGVAKASKSWIDIFKLGIVSGCHIAFGAYLAITVGGACPGIAAENPGLQKIIFGSFGLPFGLIMTLVTGGELFTGNTALVTAAYKEGKIEGKALIKNWVASYAGNFVGSLLLAYLAFKSGTLASGPASAAIATAKCSLPWDVAFVRGILCNWLVCMAVYMASGCTSMIGKMTAVYFPISAFVALGLDHSVANMFIIPLGMLRGAEITTQAFLFKNLIPVTLGNIVGGALCVMAPFGDVFGT-WGKKK 317          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1490.2919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4R6_ECTSI2.170e-14977.24Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=... [more]
A0A6U5HVT6_9STRA5.200e-10362.12Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A835YP49_9STRA2.590e-10064.98Nitrite transporter NAR1 n=1 Tax=Tribonema minus T... [more]
A0A7S0GAY3_9STRA1.380e-9860.61Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A7S2UWW2_9STRA8.720e-9752.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
B8BXN4_THAPS1.270e-9657.04Formate/nitrite transporter family member n=1 Tax=... [more]
A0A8J9ST54_9CHLO1.030e-9559.92Probable formate transporter 1 n=1 Tax=Coccomyxa s... [more]
A0A0M0J4X1_9EUKA3.420e-9554.21Nitrite transporter nar1 n=1 Tax=Chrysochromulina ... [more]
A0A448ZQ46_9STRA4.030e-9558.94Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7F978_9STRA4.920e-9558.56Form_Nir_trans-domain-containing protein n=1 Tax=F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1490contigH-paniculata_contig1490:1295..5535 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score447.2
Seed ortholog evalue6.9e-123
Seed eggNOG ortholog2880.D7G4R6
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Formate/nitrite transporter
EggNOG OGs2QUGF@2759,COG2116@1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2019
Cds size1026
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1490.2919.1prot_H-paniculata_contig1490.2919.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1490 1618..4865 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929192.7401493-UTR-H-paniculata_contig1490:1294..16171622929192.7401493-UTR-H-paniculata_contig1490:1294..1617Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1490 1295..1617 +
1691480764.637389-UTR-H-paniculata_contig1490:1294..16171691480764.637389-UTR-H-paniculata_contig1490:1294..1617Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1490 1295..1617 +
1622929192.8559563-UTR-H-paniculata_contig1490:4865..55351622929192.8559563-UTR-H-paniculata_contig1490:4865..5535Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1490 4866..5535 +
1691480764.7152927-UTR-H-paniculata_contig1490:4865..55351691480764.7152927-UTR-H-paniculata_contig1490:4865..5535Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1490 4866..5535 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929192.7605758-CDS-H-paniculata_contig1490:1617..18841622929192.7605758-CDS-H-paniculata_contig1490:1617..1884Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 1618..1884 +
1691480764.6495538-CDS-H-paniculata_contig1490:1617..18841691480764.6495538-CDS-H-paniculata_contig1490:1617..1884Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 1618..1884 +
1622929192.7741694-CDS-H-paniculata_contig1490:2420..26011622929192.7741694-CDS-H-paniculata_contig1490:2420..2601Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 2421..2601 +
1691480764.658848-CDS-H-paniculata_contig1490:2420..26011691480764.658848-CDS-H-paniculata_contig1490:2420..2601Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 2421..2601 +
1622929192.7857993-CDS-H-paniculata_contig1490:3248..34021622929192.7857993-CDS-H-paniculata_contig1490:3248..3402Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 3249..3402 +
1691480764.667824-CDS-H-paniculata_contig1490:3248..34021691480764.667824-CDS-H-paniculata_contig1490:3248..3402Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 3249..3402 +
1622929192.8050787-CDS-H-paniculata_contig1490:3717..38661622929192.8050787-CDS-H-paniculata_contig1490:3717..3866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 3718..3866 +
1691480764.6773179-CDS-H-paniculata_contig1490:3717..38661691480764.6773179-CDS-H-paniculata_contig1490:3717..3866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 3718..3866 +
1622929192.8204792-CDS-H-paniculata_contig1490:4262..43681622929192.8204792-CDS-H-paniculata_contig1490:4262..4368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 4263..4368 +
1691480764.687152-CDS-H-paniculata_contig1490:4262..43681691480764.687152-CDS-H-paniculata_contig1490:4262..4368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 4263..4368 +
1622929192.8376932-CDS-H-paniculata_contig1490:4696..48651622929192.8376932-CDS-H-paniculata_contig1490:4696..4865Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 4697..4865 +
1691480764.7000668-CDS-H-paniculata_contig1490:4696..48651691480764.7000668-CDS-H-paniculata_contig1490:4696..4865Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1490 4697..4865 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1490.2919.1

>prot_H-paniculata_contig1490.2919.1 ID=prot_H-paniculata_contig1490.2919.1|Name=mRNA_H-paniculata_contig1490.2919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=342bp
MSEAMARVIVPLVLAVACLTQGTDGFVRPISSKTFSFGNSIGVHATDFAS
PRAGYAPQRSLRLSSIPMPVMASPLAASPSIKPPPDMYQNAVTIGEKKAA
MPAAKIFTMGIISGCHIAMGALLAVTVGGSCPGLASTNPGLQKILFGAFG
LPFGLFMTVVGGGELFTGNTAVVTAAAIEGKASTGGLLKNWIFSYVGNFL
GSLLIVYLAITAGAVSNPATAMGIASTKTSLTFLQAFTRGVLCNWLVCMA
VWMSISASDAFGKFCAIFLPISAFVAMGLDHSVANMFLIPLGMALGAGVS
WPQFLMANLLPVTLGNIVGGAVAVCGLYSAAFGSLFGKQKA*
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mRNA from alignment at H-paniculata_contig1490:1295..5535+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1490.2919.1 ID=mRNA_H-paniculata_contig1490.2919.1|Name=mRNA_H-paniculata_contig1490.2919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4241bp|location=Sequence derived from alignment at H-paniculata_contig1490:1295..5535+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCAAGGCTACCCTATGTATGACAAATGTCCTCACCCTGTTTCAGAAACC GTCACATTCACACTGACAGTTTCACCTAGATGATGACATTTCATAGTCAT AATATATTGCGCATGATGAGTCTATTCTCTAACCAACGGGATTGGTCAAG TTGGTTCGAATTAATGTGATGATAAAAAATATACAGCTGTGTTTGGTGAC ATCATCGCCTCGAAATAGAACTGCTGATAGACCGCCGTTTGCTTTTCCAG TGTGATTGTGTTCCTCTCTCCACGCGGTTTGTCCACAGTACCGTATTTCA CTCAGTCAAACTTACACTAAAAAATGAGCGAAGCAATGGCTCGTGTCATC GTCCCTCTTGTGTTGGCGGTGGCCTGCCTGACGCAAGGCACGGATGGGTT TGTTCGACCTATTTCCTCCAAAACCTTCTCTTTTGGTAACTCTATCGGAG TACACGCTACAGACTTCGCATCGCCGCGCGCTGGGTACGCTCCGCAGCGC TCGCTCAGGCTGTCATCTATACCTATGCCGGTGATGGCTTCCCCTTTGGC CGCATCGCCATCGATCAAGCCGCCTCCTGACATGTATCAGGTGAAAAAGG CTGTCCAGAATATCCAAAAAACTGTCACCGGTCACGTGTTCGATCGTCGC ATTAGATACTGTTAGCATGTAGTAGGTCGTGTGCCCTTGAAACAGACGGT ATGATCTTGTTTCTCTACAGAGAGTAGTCCAGTACAACATTATTATGTAC GAAGTACGGGGAACAGACAGTAAGAGTAATCATGTGGGAACTCTCTGTGC CGCAATGGAGTTTCGCGTCATGAGTGTCTCCCATATCGTCGACATCATTT GACCTCATATGACTCGTGTACTTTCTTCATGTGTTAACCTTAGAAATACG AGACCCCGCGTGTGCGCTGACACAACGTCAGCGTCTGCTTTCGCCGTAGA AGAACTGTTCTTGAGTCTCAAAGTACAGTATATACTTCGAAGTATGAATG TGTGGTGCTCTTTTGTTACAATTACATCCATGAATACTTCTGTATATTTA TATGATCATGAGTACTTGGGTATTTGGCATAAGTGAGTGCACAAGGGTTC TCGTGTGACCATGCAAACACCATCAGAATGCCGTTACCATCGGAGAGAAG AAGGCTGCAATGCCTGCGGCCAAGATTTTCACGATGGGGATCATCTCAGG GTGCCATATCGCAATGGGGGCACTTTTGGCTGTAACGGTAGGCGGCAGCT GCCCTGGGCTCGCCTCCACAAACCCTGGCCTTCAGAAGATCTTGTTCGGG GCGTTCGGTAAGCGGGAATATGTGTTGAATCTGGTTCTACTGTTCACTTG GTCTACTACAGTACATATATACAACATGTTGAGGAAATTATCCGTGCGAC TTGTCTGAATGTATGTCCTGTTTGTCTTGCCGAACACCCCCCAAAACGAC CAAAACGACAAAACCAAGACGTTTCTAATTGAAAAATTAAAACTGCTCTT GAGAGCGTCTCGTTCGAACAATCAGCTGCAGGTTGCTCTTTTACGGGAAA GTTCGACTACAGGGTTACAAAGTGCAAATAGTTATTTGTGATTCGCAGTA GTACCACAGGCGATCCCATATTCGAATCCAAGAATTTCTGTCGACGCCAC CGCATCTCTCGATTGAAGGTATGCGTTCCAATAGCAGGCCGAAGCAAAGC AATAGTCACTGTATGCACTGATACCTTGAAGTTTTTTCAAGCCTTTCCAC AGAACTAACAGCGAACCCGGGCGGCAACATAAAAATTCCCACATGATGAC CATATGCGAACCGGGTGGCAACGTGAAACTTCTCACATGGCCATACGCGA ACTAGTTCAATGATTAAGACGTGTATAGTGCCCGGCCTGTGAGAAGACTA TAAATTTTCTCGGGTTGTGAGTTTGCCTGCTGATCGTCATTTCTCGGCTC ATAGGTTTGCCGTTTGGTCTCTTCATGACGGTCGTCGGGGGTGGCGAGCT GTTCACTGGAAACACAGCTGTTGTCACCGCCGCGGCGATCGAAGGCAAGG CATCTACGGGCGGTCTCCTCAAGAACTGGATTTTCTCCTATGTAGGCAAC TTCCTAGGGTACGTGTTACGTTACCAACAGTAGAAGGGCAATCACGATCG GTAACACTGAGATTGGTTGACGTCCCGCTGTTGAGTAGTTTGATGGTCTC ACCGCAGAACGTATAGCCATATGGACCGTGTATGAATTAAGGGTGTTCAG ATCTAGACTGACCAATCCAGGTGCCTATGGGTTGACGTGCGCGTGGCAAA ATAAACAAAAATCGGCGGTCGACTATGAAATATAGTGCATAAGATCGTAA GCGGAACTCAGGTCACTGGGTATTTGAAACTCATCACAGCGAAAAACGAG AACATTGTCTACATTCGTTGCAGGTCACTTTTGATCGTGTACTTGGCCAT AACCGCCGGCGCCGTCTCCAATCCGGCGACTGCAATGGGCATTGCCTCCA CCAAGACATCTCTCACTTTCCTCCAAGCCTTCACGAGGGGTGTGTTGTGC AACTGGCTCGTGTGTATGGCCGGTACGTACTACGAAGTAGCCTCATAACA GGGACGTGCTTGTTTTTTTACTCTCCAACGTTTATCTCTGTGGAGTAAGT AAGCTACGGCAGCGTGGCAAGCACCGCCCGCACTTATGCGATAAAACCAC ATATTTCTTTGTACGGATCGTGAGTGTGAAGCTGCGTTCGCGATTCCTTC AAGAAAAATCGATGTCGCTCCGTCCAATGGAACTGGAATATATAGCTTGT ATAAGTGGTCATCTTGCATGAATTTCGCCTAGTACCGTAAACCGGGCGCC GTCCTATTCTCGTATTACAATCCCCCGTGTGTGTGTTGACCTCGCGGAAT GCACTTGTAACCGAATGCTTATTCGTATAAACAAAAACCGGACTGGTGCG CTTTTTCTTCTCCCTCAGTATGGATGTCCATCAGCGCAAGTGATGCGTTT GGAAAGTTCTGCGCCATCTTCCTTCCTATCTCTGCGTTCGTCGCCATGGG CTTGGATCATTCAGTGGCAAATATGTAAGATCAATGCGTTCCTTTGTATG CAGGGATCGCTCGCAAACAACCCTGCCTTTTATATATTAACATGTCGATT CCCATTTCGTCCCATCTTCTCTTGCCATCTCCCGGTCAAATTATTCGCTG CTCTAGTGAGCATTTTGTAGCGGTTATTCACGGTGAACTGGCAAAATTGT AGTCAAGTTGACTGAGTGTTAGCCACATGTTGTCAACTCCTGTACATCGC CGTCGTGGATACGTTCGCAACTCATTTGTACGACCTCGAACTGCTCTGCT GAAACTCACGGATCCCCACGCTGCTGACTTGAAACACCCAAATGCTTTCT AGGTTCCTTATCCCTCTGGGAATGGCACTCGGTGCCGGTGTGTCCTGGCC CCAATTCCTCATGGCCAACCTCCTGCCGGTAACTCTAGGCAACATCGTCG GCGGCGCTGTCGCTGTGTGCGGTCTATACTCGGCCGCTTTCGGCTCGCTG TTCGGCAAGCAAAAGGCTTGAGCTCCATATTTTGGGGTTTCATAAGACAA TGTTGTCGTCATTTCGCCTTGGAAAAGACTTGTTTATTTAACGTGCTCAC TAGCCGTGTGGTAACTCTGAGTATTTATTGTTCGGAAATTTCAGTGTTGT ACTTCAGTTGATCGCGACGAAAAACGAAGCTATTCTTCATGTTTGATTTC TAGAGCAGAGAGCTAGCTAGCTTGTGGACATACAACGGAATACGGGGGGG GGGTGTAGTGCCAATCGATTCATTGTACACACCCTAGGTGCGTTGATTCA TAGAGCACGACAGTGTTAAGATGTTAATAAGCAAGGTCTACGCTTTAAAA AATATACCTCCGACGCTGGCATATCCCTGTACCAGATAAAAAAGAGTTGA GTCCAGTTGGGGTTGGTGATTGGCACGTTATGTTGGGGTGTGGCACGAAG TTGCAGACGAATTGTTACTATTGGACCGCGTACGGACTTTATGGGTAGAG GAAAAGTACATCTCAGGTGGAAAGAGCGTGTACATGGGTGTGTTTGCAGT TCTTCCCGATAATCGTGACGAAAGATGGAGGGGTGTTACAGATGATCAAC GGTCACTTGCATAGTTTTTGGTCTTCAGTGGGCAATCTGTCGCGAGGATC CTGCACAACGCAGTTGTAGGTATAAATCAACACAATTAAAT
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Coding sequence (CDS) from alignment at H-paniculata_contig1490:1295..5535+

>mRNA_H-paniculata_contig1490.2919.1 ID=mRNA_H-paniculata_contig1490.2919.1|Name=mRNA_H-paniculata_contig1490.2919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2052bp|location=Sequence derived from alignment at H-paniculata_contig1490:1295..5535+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCGAAGCAATGGCTCGTGTCATCGTCCCTCTTGTGTTGGCGGTGGC
CTGCCTGACGCAAGGCACGGATGGGTTTGTTCGACCTATTTCCTCCAAAA
CCTTCTCTTTTGGTAACTCTATCGGAGTACACGCTACAGACTTCGCATCG
CCGCGCGCTGGGTACGCTCCGCAGCGCTCGCTCAGGCTGTCATCTATACC
TATGCCGGTGATGGCTTCCCCTTTGGCCGCATCGCCATCGATCAAGCCGC
CTCCTGACATGTATCAGATGAGCGAAGCAATGGCTCGTGTCATCGTCCCT
CTTGTGTTGGCGGTGGCCTGCCTGACGCAAGGCACGGATGGGTTTGTTCG
ACCTATTTCCTCCAAAACCTTCTCTTTTGGTAACTCTATCGGAGTACACG
CTACAGACTTCGCATCGCCGCGCGCTGGGTACGCTCCGCAGCGCTCGCTC
AGGCTGTCATCTATACCTATGCCGGTGATGGCTTCCCCTTTGGCCGCATC
GCCATCGATCAAGCCGCCTCCTGACATGTATCAGAATGCCGTTACCATCG
GAGAGAAGAAGGCTGCAATGCCTGCGGCCAAGATTTTCACGATGGGGATC
ATCTCAGGGTGCCATATCGCAATGGGGGCACTTTTGGCTGTAACGGTAGG
CGGCAGCTGCCCTGGGCTCGCCTCCACAAACCCTGGCCTTCAGAAGATCT
TGTTCGGGGCGTTCGAATGCCGTTACCATCGGAGAGAAGAAGGCTGCAAT
GCCTGCGGCCAAGATTTTCACGATGGGGATCATCTCAGGGTGCCATATCG
CAATGGGGGCACTTTTGGCTGTAACGGTAGGCGGCAGCTGCCCTGGGCTC
GCCTCCACAAACCCTGGCCTTCAGAAGATCTTGTTCGGGGCGTTCGGTTT
GCCGTTTGGTCTCTTCATGACGGTCGTCGGGGGTGGCGAGCTGTTCACTG
GAAACACAGCTGTTGTCACCGCCGCGGCGATCGAAGGCAAGGCATCTACG
GGCGGTCTCCTCAAGAACTGGATTTTCTCCTATGTAGGCAACTTCCTAGG
GTTTGCCGTTTGGTCTCTTCATGACGGTCGTCGGGGGTGGCGAGCTGTTC
ACTGGAAACACAGCTGTTGTCACCGCCGCGGCGATCGAAGGCAAGGCATC
TACGGGCGGTCTCCTCAAGAACTGGATTTTCTCCTATGTAGGCAACTTCC
TAGGGTCACTTTTGATCGTGTACTTGGCCATAACCGCCGGCGCCGTCTCC
AATCCGGCGACTGCAATGGGCATTGCCTCCACCAAGACATCTCTCACTTT
CCTCCAAGCCTTCACGAGGGGTGTGTTGTGCAACTGGCTCGTGTGTATGG
CCGGTCACTTTTGATCGTGTACTTGGCCATAACCGCCGGCGCCGTCTCCA
ATCCGGCGACTGCAATGGGCATTGCCTCCACCAAGACATCTCTCACTTTC
CTCCAAGCCTTCACGAGGGGTGTGTTGTGCAACTGGCTCGTGTGTATGGC
CGTATGGATGTCCATCAGCGCAAGTGATGCGTTTGGAAAGTTCTGCGCCA
TCTTCCTTCCTATCTCTGCGTTCGTCGCCATGGGCTTGGATCATTCAGTG
GCAAATATTATGGATGTCCATCAGCGCAAGTGATGCGTTTGGAAAGTTCT
GCGCCATCTTCCTTCCTATCTCTGCGTTCGTCGCCATGGGCTTGGATCAT
TCAGTGGCAAATATGTTCCTTATCCCTCTGGGAATGGCACTCGGTGCCGG
TGTGTCCTGGCCCCAATTCCTCATGGCCAACCTCCTGCCGGTAACTCTAG
GCAACATCGTCGGCGGCGCTGTCGCTGTGTGCGGTCTATACTCGGCCGCT
TTCGGCTCGCTGTTCGGCAAGCAAAAGGCTTGAGTTCCTTATCCCTCTGG
GAATGGCACTCGGTGCCGGTGTGTCCTGGCCCCAATTCCTCATGGCCAAC
CTCCTGCCGGTAACTCTAGGCAACATCGTCGGCGGCGCTGTCGCTGTGTG
CGGTCTATACTCGGCCGCTTTCGGCTCGCTGTTCGGCAAGCAAAAGGCTT
GA
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