mRNA_H-paniculata_contig14856.2891.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14856.2891.1
Unique NamemRNA_H-paniculata_contig14856.2891.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA)

HSP 1 Score: 214 bits (546), Expect = 7.540e-61
Identity = 122/306 (39.87%), Postives = 182/306 (59.48%), Query Frame = 1
Query:  142 LAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPF-SRDIPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGH-SLEGFVDADWAKDVEDRKSTTRYVWS*TMVQSVDAL 1050
            LA   D EL+ MDV+ AYL + +EE+++VK PP +  + S     V RL +SLYGLKQSGRNW+  +  +  G G   S+ D CLY      GE  L++ +YVDDL+I    RE V +FKH IS+ F MKDL  L  +LG+ ++RDR   ++ ISQ +YI  +L ++   +C+ VLTP+EG +     +   KP        NEY  +VGSLL+A+  T PDIA AV    + ++    E +   KR+ RYL   R++G+ + G S G  +L G+ DAD+A D ++R+ST+ Y ++ +  + V+ +
Sbjct:   73 LACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDV-KPD-------NEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTI 369          
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA)

HSP 1 Score: 216 bits (549), Expect = 3.980e-59
Identity = 122/306 (39.87%), Postives = 181/306 (59.15%), Query Frame = 1
Query:  142 LAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRDI-PFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGH-SLEGFVDADWAKDVEDRKSTTRYVWS*TMVQSVDAL 1050
            LA   D EL+ MDVD AYL + +EE++++K PP +  +  +    V RL +SLYGLKQSGRNW+  +  +  G GL  S  D CLY      GE  L++ +YVDDL+I    R   D+FK +IS+ F MKDL  L  +LG+ ++R+R N  + ISQ  YI  +L ++G  +C+ VLTP+EG +     +   KP        NEY  +VGSLL+A+  T PDIA AV    + ++   +E +   KR+ RYL   RD+G+ + G S G  +L G+ DAD+A D ++R+ST+ Y ++ +    V+ +
Sbjct:  293 LACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTLTKMDGKDV-KPD-------NEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDVNTI 589          
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 217 bits (553), Expect = 4.250e-58
Identity = 137/326 (42.02%), Postives = 183/326 (56.13%), Query Frame = 1
Query:  142 LAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRDIP--FVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPV--EGKVKISTPESTDKPSEQKSGNSN-EYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGK--SNGHSLEGFVDADWAKDVEDRKSTTRYVWS*TMVQSVDALGSNS*SRGPVQRQST 1095
            LAA+HD EL+ MDV  AYLN  + E+L++ PP        DIP     +L +SLYGLKQ+GR WN T    L  +G  R   ++CLY  R EGG+   LV VYVDDL++A   R  +DE K  ++  F+M+DLG  S VLGI++RRDR   II +SQ  YI  VLKR G ++C+ V TP+  + ++    P + D  +E    N    Y  +VGSL++A  GT PDIA A     R   +P R  +   KR+ RYL   RDL + F G   S   S  G+ DADW+ D E  KST+ YV+    + S  A+G  S  +  V   ST
Sbjct: 1102 LAAKHDLELDQMDVQTAYLNGKLTEDLYLLPPDGV-----DIPKGHCWKLKKSLYGLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYATGLLGRFSTNPKRCHWEAAKRVLRYLKGTRDLELQFDGNDVSMDMSFHGYSDADWSGDPETSKSTSGYVF----LSSRGAIGWASKRQSLVALSST 1417          
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT)

HSP 1 Score: 211 bits (536), Expect = 6.030e-58
Identity = 132/391 (33.76%), Postives = 201/391 (51.41%), Query Frame = 1
Query:   10 EALKGPEAEKWRAAMEEEWEALVDNGTWES---------------------------------------------EDPGSPHIDVT----YCNLAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRD-IPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVK-ISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHSLEGFVDADWAKDVEDRKSTTRYVWS*T 1026
            EA++ PEA  W  AM+ E EAL +N T+E                                              E+  SP  ++T       LAA+++  +  MDV  A+L+ P++ E+F++ P  F   S + +  V RL +SLYGLKQSGRNWN  L ++L+  G  R+  D C+Y  +   GE  ++V ++VDDL+IA    +K+ +FK N+  +FRMKDLG +S  LGI  ++   NG+I ++Q  YI+++L R+G  +C+   TP E + + +S  E  D            YR IVGSL++  T T PDI+  V + ++++  P  ED  T K + RYL    +  + F       +L  + DADWA  ++DR STT Y +S T
Sbjct:  175 EAMESPEASGWEKAMKGEMEALKENDTFELTSLPEGKNLVGGSWVYTIKEDANGLETLKARYVAKGYNQVHGIDYEETFSPTANITSIRILMQLAAQYNLTVHQMDVKTAFLHVPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVYQKQT--GEDIIIVVIWVDDLIIASSNTDKISQFKENMKSKFRMKDLGEISYFLGISFKQG--NGVIKMNQKRYIQKILDRFGMSDCKPRTTPCEQRFEGMSDSEQVDP---------RRYREIVGSLIYLMTCTRPDISWVVSKLSQKLSCPRLEDLVTAKHVLRYLKGSMEHELCFRKCDGELNLIAYTDADWASSLDDRHSTTGYCFSLT 552          
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: W7TIM1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIM1_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.570e-57
Identity = 120/301 (39.87%), Postives = 180/301 (59.80%), Query Frame = 1
Query:  157 DFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRD-IPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGH-SLEGFVDADWAKDVEDRKSTTRYVWS*TMVQSVDAL 1050
            D EL+ MDV+ AYL + +EE+++VK P  +  +  +    V RL +SLYGLKQSGRNW+  +  +  G G   S+ D CLY      GE  L++ +YVDDL+I    RE VD+FK  IS+ F MKDL  L  +LG+ ++R+R   ++ ISQ +YI  VL ++G  +CR VLTP+EG   ++  +  D   +      NEY  +VGSLL+A+  T PDIA AV    + ++    E +   KR+ RYL   RD+GI + G + G  +L GF DAD+A D ++R+ST+ Y ++ +    ++ +
Sbjct:  307 DLELDNMDVETAYLQSDLEEKVYVKQPIGYEQYGLNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVIVLYVDDLIITSNSREMVDKFKQAISREFSMKDLKELDWILGMAIKRNREKRVMEISQTAYIDMVLNKFGMADCRPVLTPMEGT--LTKMDGKDAKPD------NEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRYTGNTTGSFTLVGFADADYAGDKDNRRSTSGYAFTLSHGDDINTI 598          
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: UPI001C91A683 (hypothetical protein n=1 Tax=Modestobacter lapidis TaxID=1608613 RepID=UPI001C91A683)

HSP 1 Score: 202 bits (515), Expect = 1.920e-57
Identity = 113/300 (37.67%), Postives = 178/300 (59.33%), Query Frame = 1
Query:  130 TYCNLAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRDIPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGRREK-VDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHSLE--GFVDADWAKDVEDRKSTTRYVWS 1020
            T  + AA +D E+E MDV  A+L+  +EEE+++K P  F    ++   V +L +SLYGLKQS R W      +   IG  RS  D C+Y  R+  GE  +++ +YVDD+++ G   K +   K  ++++F MKDLG+ + +LG+ +RRDR    + + Q  YI  +LK++   +C+ V TP+   VK+S  +S     E++   S  Y   VGSL++A   T PDIA AV   +R M +P +E +   KR+FRYL    +  + F GK +G++LE  G VDA+W  D+++R+ST+ YV++
Sbjct:   56 TVLSAAAAYDLEIEQMDVKTAFLHGDLEEEIYMKQPEGFVARGKEN-LVCKLEKSLYGLKQSPRMWYQKFDSYAQQIGFTRSHADHCVYVKRE--GEMFVILTLYVDDMLLIGNSTKMIRTVKDLLAKQFEMKDLGAANFILGMHIRRDRARRRLWLGQERYIEGILKKFNMTDCKPVGTPMSVGVKLSAEQSPQNEEEKEQMASIPYASAVGSLMYAMVCTRPDIAQAVGVLSRYMSNPGKEHWIAVKRVFRYLRGTSNYALCFEGKGDGNTLEFMGSVDANWEGDLDNRRSTSGYVFN 352          
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID)

HSP 1 Score: 211 bits (538), Expect = 3.770e-56
Identity = 131/391 (33.50%), Postives = 203/391 (51.92%), Query Frame = 1
Query:   10 EALKGPEAEKWRAAMEEEWEALVDNGTWE---------------------------------------SEDPGSPHIDV-----------TYCNLAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRDIPFVR-RLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETN--LLVAVYVDDLVIAGRREKV-DEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHSL-EGFVDADWAKDVEDRKSTTRYVW 1017
            EAL  P AE W+ A++ E+++L++N TW+                                       S+  G  + DV           +   +  E D EL  MDV  A+LN  +EE++F+K P  F   +RD P +  +L +S+YGLKQS R WN  + +FL   G  R+  D C+Y  +   G+ +  L+VAVYVDDL+IA    ++  E K  + +RF M+D   +  +LG++V+RDR N  +TI Q +++  VL R+  +EC+ V TP+E  +K       ++  + K     +Y+  +G L +AS GT PDI+ AV   ++ M  P ++ +   KR+ RYL    D G+ + G  +G  L  GF DADWA D++ RKST+ YV+
Sbjct:  781 EALSSPNAELWKDAIQNEYDSLIENETWKLVEMPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGF--INRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKLK-----DYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVF 1164          
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA)

HSP 1 Score: 211 bits (536), Expect = 3.990e-56
Identity = 120/306 (39.22%), Postives = 177/306 (57.84%), Query Frame = 1
Query:  142 LAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRDI-PFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGH-SLEGFVDADWAKDVEDRKSTTRYVWS*TMVQSVDAL 1050
            LA   D EL+ MDVD AYL + +EE++++K P  +  +  +    V RL +SLYGLKQSGRNW+  +  +  G G   S+ D CLY      GE  L+V +YVDDL+IA   R   D+FK  IS+ F MKDL  L  +LG+ ++R+R   I+ ISQ  YI  +L ++G  +C+ VLTP+EG +     +     SE        Y  +VGSLL+A+  T PDIA AV    + ++    E +   KR+ RYL   RD+GI + G + G  +L GF DAD+A D ++R+ST+ Y ++ +    ++ +
Sbjct:  591 LACILDLELDNMDVDTAYLQSDLEEKVYIKQPHGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVVVLYVDDLIIASNSRTMADKFKQAISREFSMKDLKELDWILGMAIKRNREKRIMEISQTGYIDMMLNKFGMTDCKPVLTPMEGTLTKMDGKDVKPDSE--------YMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRYTGNTTGSFTLVGFADADYAGDKDNRRSTSGYAFTLSHGDDINTI 887          
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: A0A2N9HGZ8_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HGZ8_FAGSY)

HSP 1 Score: 201 bits (511), Expect = 5.720e-56
Identity = 122/333 (36.64%), Postives = 193/333 (57.96%), Query Frame = 1
Query:   49 AMEEEWEALVDNGTWE------SEDPGSPHIDV-TYCNLAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFS-PFSRDIPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHSLEGFVDADWAKDVEDRKSTTRYVWS 1020
            AM EE E+L  N TWE       + P   H  +     L A+ D ELE +DV  A+L+  +EEE+F++ P  F  P + ++  V RL +SLYGLKQS R W      +++ IG  R   D C+Y    E G + + + +YVDD++IA +   +V+  K  + + F MKDLG+  ++LG+E+RRDR    + +SQ +YIR+VL+++   + + V TP+    ++S+ +  +   E ++ +   Y   VG L++    T PD+A AV   +R M +P RE ++  K IFRYL    + GI F  +   +S+ G+VDAD+A +V+DR+STT YV++
Sbjct:    3 AMVEENESLSKNKTWELTELPKGKKPIVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENL--VCRLKKSLYGLKQSPRQWYKRFDSYMIPIGYTRCEYDCCVYVRILEDG-SYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGATKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPNNEEEIENMSKVPYASAVGCLMYEMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFT 332          
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: A0A2N9IB36_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IB36_FAGSY)

HSP 1 Score: 211 bits (536), Expect = 7.760e-56
Identity = 128/349 (36.68%), Postives = 201/349 (57.59%), Query Frame = 1
Query:    1 SAAEALKGPEAEKWRAAMEEEWEALVDNGTWE------SEDPGSPHIDV-TYCNLAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFS-PFSRDIPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHSLEGFVDADWAKDVEDRKSTTRYVWS 1020
            S  EA++  E +KW  AM EE E+L  N TWE       + P   H  +     L A+ D ELE +DV  A+L+  +EEE+F+  P  F  P + ++  V RL +SLYGLKQS R W      +++ IG  R   D C+Y    E G + + + +YVDD++IA +   +V+  K  + + F MKDLGS  ++LG+E+RRDR    + +SQ +YIR+VL+++   + + V TP+    ++S+ +      E ++ +   Y  +VG L++A   T PD+A AV   +R M +P RE ++  K IFRYL    +  I F  +   +S+ G++DAD+A +V+DR+STT YV++
Sbjct:  306 SGQEAIESSEKDKWMEAMVEENESLSKNKTWELTELPKGKKPIVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMVQPEGFKQPGTENL--VCRLKKSLYGLKQSPRQWYKRFDSYMIQIGYTRCEYDCCVYVRILEDG-SYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGSAKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPKNEEEIENMSKVPYASVVGCLMYAMVCTRPDLAHAVSTVSRYMVNPGREHWNAVKWIFRYLKGTAEHEILFSRQLGTNSIVGYLDADYAGEVDDRRSTTSYVFT 651          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TCB8_9STRA7.540e-6139.87Gag-pol polyprotein n=3 Tax=Nannochloropsis gadita... [more]
W7TJ26_9STRA3.980e-5939.87Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
A0A409WVI7_9AGAR4.250e-5842.02Integrase catalytic domain-containing protein (Fra... [more]
A0A6S7HLY2_PARCT6.030e-5833.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
W7TIM1_9STRA1.570e-5739.87Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
UPI001C91A6831.920e-5737.67hypothetical protein n=1 Tax=Modestobacter lapidis... [more]
A0A7M6DPI8_9CNID3.770e-5633.50Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
W7T174_9STRA3.990e-5639.22Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
A0A2N9HGZ8_FAGSY5.720e-5636.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9IB36_FAGSY7.760e-5636.68CCHC-type domain-containing protein n=1 Tax=Fagus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14856contigH-paniculata_contig14856:4582..6189 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score195.3
Seed ortholog evalue4.5e-47
Seed eggNOG ortholog164328.Phyra85518
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs3QH4V@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons3
Model size1393
Cds size972
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14856.2891.1prot_H-paniculata_contig14856.2891.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14856 4633..5819 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929182.3178542-UTR-H-paniculata_contig14856:4581..46321622929182.3178542-UTR-H-paniculata_contig14856:4581..4632Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14856 4582..4632 +
1691480763.1555188-UTR-H-paniculata_contig14856:4581..46321691480763.1555188-UTR-H-paniculata_contig14856:4581..4632Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14856 4582..4632 +
1622929182.3755305-UTR-H-paniculata_contig14856:5819..61891622929182.3755305-UTR-H-paniculata_contig14856:5819..6189Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14856 5820..6189 +
1691480763.2039006-UTR-H-paniculata_contig14856:5819..61891691480763.2039006-UTR-H-paniculata_contig14856:5819..6189Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14856 5820..6189 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929182.3294342-CDS-H-paniculata_contig14856:4632..46941622929182.3294342-CDS-H-paniculata_contig14856:4632..4694Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14856 4633..4694 +
1691480763.173159-CDS-H-paniculata_contig14856:4632..46941691480763.173159-CDS-H-paniculata_contig14856:4632..4694Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14856 4633..4694 +
1622929182.3462224-CDS-H-paniculata_contig14856:4849..54641622929182.3462224-CDS-H-paniculata_contig14856:4849..5464Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14856 4850..5464 +
1691480763.1850424-CDS-H-paniculata_contig14856:4849..54641691480763.1850424-CDS-H-paniculata_contig14856:4849..5464Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14856 4850..5464 +
1622929182.3631268-CDS-H-paniculata_contig14856:5524..58191622929182.3631268-CDS-H-paniculata_contig14856:5524..5819Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14856 5525..5819 +
1691480763.193249-CDS-H-paniculata_contig14856:5524..58191691480763.193249-CDS-H-paniculata_contig14856:5524..5819Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14856 5525..5819 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14856.2891.1

>prot_H-paniculata_contig14856.2891.1 ID=prot_H-paniculata_contig14856.2891.1|Name=mRNA_H-paniculata_contig14856.2891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp
MEEEWEALVDNGTWESEDPGSPHIDVTYCNLAAEHDFELEGMDVDAAYLN
APVEEELFVKPPPEFSPFSRDIPFVRRLHRSLYGLKQSGRNWNNTLYDFL
VGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGRREKVDEFKHN
ISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDEC
REVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPD
IACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHSLE
GFVDADWAKDVEDRKSTTRYVWS*
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mRNA from alignment at H-paniculata_contig14856:4582..6189+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14856.2891.1 ID=mRNA_H-paniculata_contig14856.2891.1|Name=mRNA_H-paniculata_contig14856.2891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1608bp|location=Sequence derived from alignment at H-paniculata_contig14856:4582..6189+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCGCAGCAGAAGCATTAAAGGGTCCAGAGGCGGAAAAATGGCGCGCGGC AATGGAGGAAGAATGGGAGGCGTTGGTCGACAATGGAACATGGGAAAGCG AAGACCCGGGGAGGTTACCGGCAGGGCGCAAGGCGATTCGTACGAAATGG ATATTCAAGCGGAAACTGAAGGAGGACGGCAGCGTGGCACGCTACAAAGC GCGACTGGTGGCTCAAGATTTTTCCCAGGTGGAGGGTGAAGATTTCTTTG AAATCAGTGCCCCCGTAGCCCGCATATCGACGTTACTTACTGTAACCTGG CCGCCGAACATGATTTCGAATTAGAAGGCATGGACGTGGATGCGGCGTAT TTGAACGCCCCAGTAGAAGAAGAGCTGTTTGTTAAGCCACCCCCCGAGTT TTCCCCTTTCTCCCGAGACATACCGTTTGTGCGCCGCCTGCATAGAAGCC TGTACGGCCTCAAGCAGAGCGGCCGAAACTGGAATAACACTCTTTACGAT TTTCTTGTTGGGATAGGACTCGACCGTTCCACTACCGATTCATGCTTGTA CTCTTCCCGCGACGAAGGGGGAGAGACAAACCTTCTGGTGGCCGTGTATG TTGACGACCTGGTCATTGCTGGCCGTCGCGAGAAAGTAGACGAGTTCAAG CATAACATAAGCCAGCGTTTTAGGATGAAAGACTTGGGCTCTCTCTCGCG CGTGTTGGGAATAGAAGTACGACGTGACCGCCCGAATGGTATCATAACCA TTTCGCAGGGTAGCTACATCCGCGAGGTACTAAAAAGATACGGTTTTGAC GAGTGTCGAGAAGTACTCACCCCTGTAGAGGGAAAAGTGAAGATTTCCAC ACCCGAGTCGACCGACAAGCCCTCCGAACAGAAGTCGCTTGGAGCTGTTC TGCCCGATATAGGCACAGGAGTACAAGAAGGCAGCAGAGGGAGGAGTGGC AATTCAAATGAATACAGAGGCATTGTAGGATCACTCCTGCACGCCTCGAC AGGAACTACACCTGATATAGCATGTGCGGTACACCAAGCAGCACGTCGTA TGGAGGACCCGTGCCGGGAAGACTTCAGTACATGCAAGCGCATTTTTCGT TATCTCAGTACTGTGCGTGACCTCGGCATTACGTTTGGCGGTAAGAGTAA TGGTCACAGTCTGGAAGGATTCGTTGATGCCGATTGGGCGAAGGATGTCG AGGACCGAAAGTCCACAACAAGATACGTTTGGAGCTGAACGATGGTGCAA TCAGTTGATGCTCTAGGAAGCAACAGTTAGTCACGTGGTCCAGTACAGAG GCAGAGTACGCTGCTGCAGGAGAAGCGGGAAAGGAGACGGTATATCTTGG GAGTTACTAGGATCGATAGATTTCGGATGCAGGGGGAGCACGACATTGTT TGTGGACAATAAATCAGCTATTAATCTCAGTAAGGGGTCTGGCGCACACT GCAGGACAAAGCAGATCGAAGTGCGCTGGCACGGAAGTCGAGAGTGTATT CGGGAAGGAATATTGGCATTTGAATACGTGCAGACCGGCGATCAACTTGC TGACATTTTAATGAAAGGACTAAGCAGAGTACAGTTTCAGAGACTGAGAA ATTTACTC
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Coding sequence (CDS) from alignment at H-paniculata_contig14856:4582..6189+

>mRNA_H-paniculata_contig14856.2891.1 ID=mRNA_H-paniculata_contig14856.2891.1|Name=mRNA_H-paniculata_contig14856.2891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1944bp|location=Sequence derived from alignment at H-paniculata_contig14856:4582..6189+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGAAGAATGGGAGGCGTTGGTCGACAATGGAACATGGGAAAGCGA
AGACCCGGGGAGATGGAGGAAGAATGGGAGGCGTTGGTCGACAATGGAAC
ATGGGAAAGCGAAGACCCGGGGAGCCCGCATATCGACGTTACTTACTGTA
ACCTGGCCGCCGAACATGATTTCGAATTAGAAGGCATGGACGTGGATGCG
GCGTATTTGAACGCCCCAGTAGAAGAAGAGCTGTTTGTTAAGCCACCCCC
CGAGTTTTCCCCTTTCTCCCGAGACATACCGTTTGTGCGCCGCCTGCATA
GAAGCCTGTACGGCCTCAAGCAGAGCGGCCGAAACTGGAATAACACTCTT
TACGATTTTCTTGTTGGGATAGGACTCGACCGTTCCACTACCGATTCATG
CTTGTACTCTTCCCGCGACGAAGGGGGAGAGACAAACCTTCTGGTGGCCG
TGTATGTTGACGACCTGGTCATTGCTGGCCGTCGCGAGAAAGTAGACGAG
TTCAAGCATAACATAAGCCAGCGTTTTAGGATGAAAGACTTGGGCTCTCT
CTCGCGCGTGTTGGGAATAGAAGTACGACGTGACCGCCCGAATGGTATCA
TAACCATTTCGCAGGGTAGCTACATCCGCGAGGTACTAAAAAGATACGGT
TTTGACGAGTGTCGAGAAGTACTCACCCCTGTAGAGGGAAAAGTGAAGAT
TTCCACACCCGAGTCGACCGACAAGCCCTCCGAACAGAACCCGCATATCG
ACGTTACTTACTGTAACCTGGCCGCCGAACATGATTTCGAATTAGAAGGC
ATGGACGTGGATGCGGCGTATTTGAACGCCCCAGTAGAAGAAGAGCTGTT
TGTTAAGCCACCCCCCGAGTTTTCCCCTTTCTCCCGAGACATACCGTTTG
TGCGCCGCCTGCATAGAAGCCTGTACGGCCTCAAGCAGAGCGGCCGAAAC
TGGAATAACACTCTTTACGATTTTCTTGTTGGGATAGGACTCGACCGTTC
CACTACCGATTCATGCTTGTACTCTTCCCGCGACGAAGGGGGAGAGACAA
ACCTTCTGGTGGCCGTGTATGTTGACGACCTGGTCATTGCTGGCCGTCGC
GAGAAAGTAGACGAGTTCAAGCATAACATAAGCCAGCGTTTTAGGATGAA
AGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGACGTGACC
GCCCGAATGGTATCATAACCATTTCGCAGGGTAGCTACATCCGCGAGGTA
CTAAAAAGATACGGTTTTGACGAGTGTCGAGAAGTACTCACCCCTGTAGA
GGGAAAAGTGAAGATTTCCACACCCGAGTCGACCGACAAGCCCTCCGAAC
AGAAGAGTGGCAATTCAAATGAATACAGAGGCATTGTAGGATCACTCCTG
CACGCCTCGACAGGAACTACACCTGATATAGCATGTGCGGTACACCAAGC
AGCACGTCGTATGGAGGACCCGTGCCGGGAAGACTTCAGTACATGCAAGC
GCATTTTTCGTTATCTCAGTACTGTGCGTGACCTCGGCATTACGTTTGGC
GGTAAGAGTAATGGTCACAGTCTGGAAGGATTCGTTGATGCCGATTGGGC
GAAGGATGTCGAGGACCGAAAGTCCACAACAAGATACGTTTGGAGCTGAG
AGTGGCAATTCAAATGAATACAGAGGCATTGTAGGATCACTCCTGCACGC
CTCGACAGGAACTACACCTGATATAGCATGTGCGGTACACCAAGCAGCAC
GTCGTATGGAGGACCCGTGCCGGGAAGACTTCAGTACATGCAAGCGCATT
TTTCGTTATCTCAGTACTGTGCGTGACCTCGGCATTACGTTTGGCGGTAA
GAGTAATGGTCACAGTCTGGAAGGATTCGTTGATGCCGATTGGGCGAAGG
ATGTCGAGGACCGAAAGTCCACAACAAGATACGTTTGGAGCTGA
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