mRNA_H-paniculata_contig14856.2891.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 214 bits (546), Expect = 7.540e-61 Identity = 122/306 (39.87%), Postives = 182/306 (59.48%), Query Frame = 1 Query: 142 LAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPF-SRDIPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGH-SLEGFVDADWAKDVEDRKSTTRYVWS*TMVQSVDAL 1050 LA D EL+ MDV+ AYL + +EE+++VK PP + + S V RL +SLYGLKQSGRNW+ + + G G S+ D CLY GE L++ +YVDDL+I RE V +FKH IS+ F MKDL L +LG+ ++RDR ++ ISQ +YI +L ++ +C+ VLTP+EG + + KP NEY +VGSLL+A+ T PDIA AV + ++ E + KR+ RYL R++G+ + G S G +L G+ DAD+A D ++R+ST+ Y ++ + + V+ + Sbjct: 73 LACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDV-KPD-------NEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEIVNTI 369
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 216 bits (549), Expect = 3.980e-59 Identity = 122/306 (39.87%), Postives = 181/306 (59.15%), Query Frame = 1 Query: 142 LAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRDI-PFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGH-SLEGFVDADWAKDVEDRKSTTRYVWS*TMVQSVDAL 1050 LA D EL+ MDVD AYL + +EE++++K PP + + + V RL +SLYGLKQSGRNW+ + + G GL S D CLY GE L++ +YVDDL+I R D+FK +IS+ F MKDL L +LG+ ++R+R N + ISQ YI +L ++G +C+ VLTP+EG + + KP NEY +VGSLL+A+ T PDIA AV + ++ +E + KR+ RYL RD+G+ + G S G +L G+ DAD+A D ++R+ST+ Y ++ + V+ + Sbjct: 293 LACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTLTKMDGKDV-KPD-------NEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDVNTI 589
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR) HSP 1 Score: 217 bits (553), Expect = 4.250e-58 Identity = 137/326 (42.02%), Postives = 183/326 (56.13%), Query Frame = 1 Query: 142 LAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRDIP--FVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPV--EGKVKISTPESTDKPSEQKSGNSN-EYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGK--SNGHSLEGFVDADWAKDVEDRKSTTRYVWS*TMVQSVDALGSNS*SRGPVQRQST 1095 LAA+HD EL+ MDV AYLN + E+L++ PP DIP +L +SLYGLKQ+GR WN T L +G R ++CLY R EGG+ LV VYVDDL++A R +DE K ++ F+M+DLG S VLGI++RRDR II +SQ YI VLKR G ++C+ V TP+ + ++ P + D +E N Y +VGSL++A GT PDIA A R +P R + KR+ RYL RDL + F G S S G+ DADW+ D E KST+ YV+ + S A+G S + V ST Sbjct: 1102 LAAKHDLELDQMDVQTAYLNGKLTEDLYLLPPDGV-----DIPKGHCWKLKKSLYGLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYATGLLGRFSTNPKRCHWEAAKRVLRYLKGTRDLELQFDGNDVSMDMSFHGYSDADWSGDPETSKSTSGYVF----LSSRGAIGWASKRQSLVALSST 1417
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT) HSP 1 Score: 211 bits (536), Expect = 6.030e-58 Identity = 132/391 (33.76%), Postives = 201/391 (51.41%), Query Frame = 1 Query: 10 EALKGPEAEKWRAAMEEEWEALVDNGTWES---------------------------------------------EDPGSPHIDVT----YCNLAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRD-IPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGRR-EKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVK-ISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHSLEGFVDADWAKDVEDRKSTTRYVWS*T 1026 EA++ PEA W AM+ E EAL +N T+E E+ SP ++T LAA+++ + MDV A+L+ P++ E+F++ P F S + + V RL +SLYGLKQSGRNWN L ++L+ G R+ D C+Y + GE ++V ++VDDL+IA +K+ +FK N+ +FRMKDLG +S LGI ++ NG+I ++Q YI+++L R+G +C+ TP E + + +S E D YR IVGSL++ T T PDI+ V + ++++ P ED T K + RYL + + F +L + DADWA ++DR STT Y +S T Sbjct: 175 EAMESPEASGWEKAMKGEMEALKENDTFELTSLPEGKNLVGGSWVYTIKEDANGLETLKARYVAKGYNQVHGIDYEETFSPTANITSIRILMQLAAQYNLTVHQMDVKTAFLHVPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVYQKQT--GEDIIIVVIWVDDLIIASSNTDKISQFKENMKSKFRMKDLGEISYFLGISFKQG--NGVIKMNQKRYIQKILDRFGMSDCKPRTTPCEQRFEGMSDSEQVDP---------RRYREIVGSLIYLMTCTRPDISWVVSKLSQKLSCPRLEDLVTAKHVLRYLKGSMEHELCFRKCDGELNLIAYTDADWASSLDDRHSTTGYCFSLT 552
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: W7TIM1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIM1_9STRA) HSP 1 Score: 214 bits (546), Expect = 1.570e-57 Identity = 120/301 (39.87%), Postives = 180/301 (59.80%), Query Frame = 1 Query: 157 DFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRD-IPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGH-SLEGFVDADWAKDVEDRKSTTRYVWS*TMVQSVDAL 1050 D EL+ MDV+ AYL + +EE+++VK P + + + V RL +SLYGLKQSGRNW+ + + G G S+ D CLY GE L++ +YVDDL+I RE VD+FK IS+ F MKDL L +LG+ ++R+R ++ ISQ +YI VL ++G +CR VLTP+EG ++ + D + NEY +VGSLL+A+ T PDIA AV + ++ E + KR+ RYL RD+GI + G + G +L GF DAD+A D ++R+ST+ Y ++ + ++ + Sbjct: 307 DLELDNMDVETAYLQSDLEEKVYVKQPIGYEQYGLNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVIVLYVDDLIITSNSREMVDKFKQAISREFSMKDLKELDWILGMAIKRNREKRVMEISQTAYIDMVLNKFGMADCRPVLTPMEGT--LTKMDGKDAKPD------NEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRYTGNTTGSFTLVGFADADYAGDKDNRRSTSGYAFTLSHGDDINTI 598
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: UPI001C91A683 (hypothetical protein n=1 Tax=Modestobacter lapidis TaxID=1608613 RepID=UPI001C91A683) HSP 1 Score: 202 bits (515), Expect = 1.920e-57 Identity = 113/300 (37.67%), Postives = 178/300 (59.33%), Query Frame = 1 Query: 130 TYCNLAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRDIPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGRREK-VDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHSLE--GFVDADWAKDVEDRKSTTRYVWS 1020 T + AA +D E+E MDV A+L+ +EEE+++K P F ++ V +L +SLYGLKQS R W + IG RS D C+Y R+ GE +++ +YVDD+++ G K + K ++++F MKDLG+ + +LG+ +RRDR + + Q YI +LK++ +C+ V TP+ VK+S +S E++ S Y VGSL++A T PDIA AV +R M +P +E + KR+FRYL + + F GK +G++LE G VDA+W D+++R+ST+ YV++ Sbjct: 56 TVLSAAAAYDLEIEQMDVKTAFLHGDLEEEIYMKQPEGFVARGKEN-LVCKLEKSLYGLKQSPRMWYQKFDSYAQQIGFTRSHADHCVYVKRE--GEMFVILTLYVDDMLLIGNSTKMIRTVKDLLAKQFEMKDLGAANFILGMHIRRDRARRRLWLGQERYIEGILKKFNMTDCKPVGTPMSVGVKLSAEQSPQNEEEKEQMASIPYASAVGSLMYAMVCTRPDIAQAVGVLSRYMSNPGKEHWIAVKRVFRYLRGTSNYALCFEGKGDGNTLEFMGSVDANWEGDLDNRRSTSGYVFN 352
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 211 bits (538), Expect = 3.770e-56 Identity = 131/391 (33.50%), Postives = 203/391 (51.92%), Query Frame = 1 Query: 10 EALKGPEAEKWRAAMEEEWEALVDNGTWE---------------------------------------SEDPGSPHIDV-----------TYCNLAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRDIPFVR-RLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETN--LLVAVYVDDLVIAGRREKV-DEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHSL-EGFVDADWAKDVEDRKSTTRYVW 1017 EAL P AE W+ A++ E+++L++N TW+ S+ G + DV + + E D EL MDV A+LN +EE++F+K P F +RD P + +L +S+YGLKQS R WN + +FL G R+ D C+Y + G+ + L+VAVYVDDL+IA ++ E K + +RF M+D + +LG++V+RDR N +TI Q +++ VL R+ +EC+ V TP+E +K ++ + K +Y+ +G L +AS GT PDI+ AV ++ M P ++ + KR+ RYL D G+ + G +G L GF DADWA D++ RKST+ YV+ Sbjct: 781 EALSSPNAELWKDAIQNEYDSLIENETWKLVEMPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGF--INRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKLK-----DYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVF 1164
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA) HSP 1 Score: 211 bits (536), Expect = 3.990e-56 Identity = 120/306 (39.22%), Postives = 177/306 (57.84%), Query Frame = 1 Query: 142 LAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFSPFSRDI-PFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGH-SLEGFVDADWAKDVEDRKSTTRYVWS*TMVQSVDAL 1050 LA D EL+ MDVD AYL + +EE++++K P + + + V RL +SLYGLKQSGRNW+ + + G G S+ D CLY GE L+V +YVDDL+IA R D+FK IS+ F MKDL L +LG+ ++R+R I+ ISQ YI +L ++G +C+ VLTP+EG + + SE Y +VGSLL+A+ T PDIA AV + ++ E + KR+ RYL RD+GI + G + G +L GF DAD+A D ++R+ST+ Y ++ + ++ + Sbjct: 591 LACILDLELDNMDVDTAYLQSDLEEKVYIKQPHGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVVVLYVDDLIIASNSRTMADKFKQAISREFSMKDLKELDWILGMAIKRNREKRIMEISQTGYIDMMLNKFGMTDCKPVLTPMEGTLTKMDGKDVKPDSE--------YMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRYTGNTTGSFTLVGFADADYAGDKDNRRSTSGYAFTLSHGDDINTI 887
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: A0A2N9HGZ8_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HGZ8_FAGSY) HSP 1 Score: 201 bits (511), Expect = 5.720e-56 Identity = 122/333 (36.64%), Postives = 193/333 (57.96%), Query Frame = 1 Query: 49 AMEEEWEALVDNGTWE------SEDPGSPHIDV-TYCNLAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFS-PFSRDIPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHSLEGFVDADWAKDVEDRKSTTRYVWS 1020 AM EE E+L N TWE + P H + L A+ D ELE +DV A+L+ +EEE+F++ P F P + ++ V RL +SLYGLKQS R W +++ IG R D C+Y E G + + + +YVDD++IA + +V+ K + + F MKDLG+ ++LG+E+RRDR + +SQ +YIR+VL+++ + + V TP+ ++S+ + + E ++ + Y VG L++ T PD+A AV +R M +P RE ++ K IFRYL + GI F + +S+ G+VDAD+A +V+DR+STT YV++ Sbjct: 3 AMVEENESLSKNKTWELTELPKGKKPIVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENL--VCRLKKSLYGLKQSPRQWYKRFDSYMIPIGYTRCEYDCCVYVRILEDG-SYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGATKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPNNEEEIENMSKVPYASAVGCLMYEMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFT 332
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Match: A0A2N9IB36_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IB36_FAGSY) HSP 1 Score: 211 bits (536), Expect = 7.760e-56 Identity = 128/349 (36.68%), Postives = 201/349 (57.59%), Query Frame = 1 Query: 1 SAAEALKGPEAEKWRAAMEEEWEALVDNGTWE------SEDPGSPHIDV-TYCNLAAEHDFELEGMDVDAAYLNAPVEEELFVKPPPEFS-PFSRDIPFVRRLHRSLYGLKQSGRNWNNTLYDFLVGIGLDRSTTDSCLYSSRDEGGETNLLVAVYVDDLVIAGRRE-KVDEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGIITISQGSYIREVLKRYGFDECREVLTPVEGKVKISTPESTDKPSEQKSGNSNEYRGIVGSLLHASTGTTPDIACAVHQAARRMEDPCREDFSTCKRIFRYLSTVRDLGITFGGKSNGHSLEGFVDADWAKDVEDRKSTTRYVWS 1020 S EA++ E +KW AM EE E+L N TWE + P H + L A+ D ELE +DV A+L+ +EEE+F+ P F P + ++ V RL +SLYGLKQS R W +++ IG R D C+Y E G + + + +YVDD++IA + +V+ K + + F MKDLGS ++LG+E+RRDR + +SQ +YIR+VL+++ + + V TP+ ++S+ + E ++ + Y +VG L++A T PD+A AV +R M +P RE ++ K IFRYL + I F + +S+ G++DAD+A +V+DR+STT YV++ Sbjct: 306 SGQEAIESSEKDKWMEAMVEENESLSKNKTWELTELPKGKKPIVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMVQPEGFKQPGTENL--VCRLKKSLYGLKQSPRQWYKRFDSYMIQIGYTRCEYDCCVYVRILEDG-SYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGSAKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPKNEEEIENMSKVPYASVVGCLMYAMVCTRPDLAHAVSTVSRYMVNPGREHWNAVKWIFRYLKGTAEHEILFSRQLGTNSIVGYLDADYAGEVDDRRSTTSYVFT 651 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14856.2891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14856.2891.1 >prot_H-paniculata_contig14856.2891.1 ID=prot_H-paniculata_contig14856.2891.1|Name=mRNA_H-paniculata_contig14856.2891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp MEEEWEALVDNGTWESEDPGSPHIDVTYCNLAAEHDFELEGMDVDAAYLNback to top mRNA from alignment at H-paniculata_contig14856:4582..6189+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14856.2891.1 ID=mRNA_H-paniculata_contig14856.2891.1|Name=mRNA_H-paniculata_contig14856.2891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1608bp|location=Sequence derived from alignment at H-paniculata_contig14856:4582..6189+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14856:4582..6189+ >mRNA_H-paniculata_contig14856.2891.1 ID=mRNA_H-paniculata_contig14856.2891.1|Name=mRNA_H-paniculata_contig14856.2891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1944bp|location=Sequence derived from alignment at H-paniculata_contig14856:4582..6189+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |