mRNA_H-paniculata_contig14816.2868.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14816.2868.1 vs. uniprot
Match: A0A6H5J855_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J855_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 2.610e-18 Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 ATSALDARSEALVQEALNRLMKDRTVLIIAHRLSTVVDADKICVLSQGKV 150 ATSALDA SEALVQEAL+RL K RTVL+IAHRLSTVV+ADKICVLSQGKV Sbjct: 132 ATSALDAHSEALVQEALSRLTKGRTVLVIAHRLSTVVNADKICVLSQGKV 181
BLAST of mRNA_H-paniculata_contig14816.2868.1 vs. uniprot
Match: D8LLV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV9_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 3.000e-17 Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 1 ATSALDARSEALVQEALNRLMKDRTVLIIAHRLSTVVDADKICVLSQGKV 150 ATSALDA SEALVQEAL+RL K RTVL+IAHRLSTVV+ADKICVLSQGKV Sbjct: 405 ATSALDAHSEALVQEALSRLTKGRTVLVIAHRLSTVVNADKICVLSQGKV 454
BLAST of mRNA_H-paniculata_contig14816.2868.1 vs. uniprot
Match: A0A0B1S4Q8_OESDE (Putative antigen peptide transporter-like 2 (Fragment) n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1S4Q8_OESDE) HSP 1 Score: 79.0 bits (193), Expect = 1.860e-15 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 1 ATSALDARSEALVQEALNRLMKDRTVLIIAHRLSTVVDADKICVLSQGKVTI--CFYHIFLSLYLRSMYF 204 ATSALDA SEALVQEALNR ++RTVLI+AHRLST+ AD+I V+ +G + CFYH+FLS ++ F Sbjct: 522 ATSALDAESEALVQEALNRCARERTVLIVAHRLSTIEKADRIAVIHKGSLVQVQCFYHLFLSFLFQATNF 591
BLAST of mRNA_H-paniculata_contig14816.2868.1 vs. uniprot
Match: A0A353BI11_9BACT (Sugar ABC transporter ATP-binding protein (Fragment) n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A353BI11_9BACT) HSP 1 Score: 73.2 bits (178), Expect = 2.080e-15 Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 1 Query: 1 ATSALDARSEALVQEALNRLMKDRTVLIIAHRLSTVVDADKICVLSQGKVTICFYH 168 ATS+LDA SEA+VQEA++RLMK RT L+IAHRLSTV AD+I V+ QG +T C H Sbjct: 9 ATSSLDAESEAMVQEAIDRLMKGRTTLVIAHRLSTVKRADRIVVMEQGMITECGKH 64
BLAST of mRNA_H-paniculata_contig14816.2868.1 vs. uniprot
Match: A0A835ZKR2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKR2_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 4.730e-15 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 1 Query: 1 ATSALDARSEALVQEALNRLMKDRTVLIIAHRLSTVVDADKICVLSQGKV 150 ATSALDA+SEALVQEAL RLM+ RTVL+IAHRLSTVV ADKICV+ G V Sbjct: 502 ATSALDAQSEALVQEALERLMQGRTVLVIAHRLSTVVSADKICVIGSGMV 551
BLAST of mRNA_H-paniculata_contig14816.2868.1 vs. uniprot
Match: K9YVI8_DACSA (ABC-type multidrug transport system, ATPase and permease component n=2 Tax=Cyanobacteria TaxID=1117 RepID=K9YVI8_DACSA) HSP 1 Score: 76.3 bits (186), Expect = 1.650e-14 Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 1 Query: 1 ATSALDARSEALVQEALNRLMKDRTVLIIAHRLSTVVDADKICVLSQGKV 150 ATSALD+ SEALVQEAL+RL+KDRTVLIIAHRL+TV +AD+I VL QGK+ Sbjct: 501 ATSALDSESEALVQEALDRLLKDRTVLIIAHRLTTVRNADRILVLEQGKI 550
BLAST of mRNA_H-paniculata_contig14816.2868.1 vs. uniprot
Match: A0A383VR86_TETOB (ABC transporter domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VR86_TETOB) HSP 1 Score: 73.9 bits (180), Expect = 2.110e-14 Identity = 36/50 (72.00%), Postives = 44/50 (88.00%), Query Frame = 1 Query: 1 ATSALDARSEALVQEALNRLMKDRTVLIIAHRLSTVVDADKICVLSQGKV 150 ATSALD SEA+VQEALNRLM RTV+++AHRLST+ DA +ICV+SQG+V Sbjct: 76 ATSALDTESEAVVQEALNRLMAGRTVVVVAHRLSTIRDAHRICVVSQGQV 125
BLAST of mRNA_H-paniculata_contig14816.2868.1 vs. uniprot
Match: Q7NI55_GLOVI (HlyB/MsbA family ABC transporter n=2 Tax=Gloeobacter TaxID=33071 RepID=Q7NI55_GLOVI) HSP 1 Score: 75.5 bits (184), Expect = 3.080e-14 Identity = 37/50 (74.00%), Postives = 45/50 (90.00%), Query Frame = 1 Query: 1 ATSALDARSEALVQEALNRLMKDRTVLIIAHRLSTVVDADKICVLSQGKV 150 ATSALD SEALVQEALNRLM+DRTV+I+AHRLST+ DAD+I VL +G++ Sbjct: 505 ATSALDNESEALVQEALNRLMQDRTVIIVAHRLSTIRDADRILVLERGRI 554
BLAST of mRNA_H-paniculata_contig14816.2868.1 vs. uniprot
Match: A0A352HT70_9PORP (Antibiotic ABC transporter ATP-binding protein n=1 Tax=Porphyromonadaceae bacterium TaxID=2049046 RepID=A0A352HT70_9PORP) HSP 1 Score: 75.5 bits (184), Expect = 3.080e-14 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 1 ATSALDARSEALVQEALNRLMKDRTVLIIAHRLSTVVDADKICVLSQGKVTICFYH 168 ATSALD SE LVQEAL RLM+DRT ++IAHRLST+V AD ICV+ +G++ C H Sbjct: 538 ATSALDTESERLVQEALERLMRDRTTIVIAHRLSTIVGADMICVMDRGRIVECGTH 593
BLAST of mRNA_H-paniculata_contig14816.2868.1 vs. uniprot
Match: A0A1G1BZ25_9BACT (Uncharacterized protein n=1 Tax=Lentisphaerae bacterium RIFOXYB12_FULL_65_16 TaxID=1798581 RepID=A0A1G1BZ25_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 3.090e-14 Identity = 35/50 (70.00%), Postives = 45/50 (90.00%), Query Frame = 1 Query: 1 ATSALDARSEALVQEALNRLMKDRTVLIIAHRLSTVVDADKICVLSQGKV 150 ATS+LD+ SEAL+QEAL R++KDRT L+IAHRLSTV+DADKI V+ QG++ Sbjct: 555 ATSSLDSESEALIQEALKRILKDRTTLVIAHRLSTVMDADKIIVIDQGRI 604 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14816.2868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14816.2868.1 >prot_H-paniculata_contig14816.2868.1 ID=prot_H-paniculata_contig14816.2868.1|Name=mRNA_H-paniculata_contig14816.2868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp ATSALDARSEALVQEALNRLMKDRTVLIIAHRLSTVVDADKICVLSQGKVback to top mRNA from alignment at H-paniculata_contig14816:324..545- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14816.2868.1 ID=mRNA_H-paniculata_contig14816.2868.1|Name=mRNA_H-paniculata_contig14816.2868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=222bp|location=Sequence derived from alignment at H-paniculata_contig14816:324..545- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14816:324..545- >mRNA_H-paniculata_contig14816.2868.1 ID=mRNA_H-paniculata_contig14816.2868.1|Name=mRNA_H-paniculata_contig14816.2868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=444bp|location=Sequence derived from alignment at H-paniculata_contig14816:324..545- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |