mRNA_H-paniculata_contig14807.2864.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14807.2864.1 vs. uniprot
Match: D8LCW7_ECTSI (Zinc transporter zupT, Zinc transporter ZIP, metal ion transmembrane transporter activity n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCW7_ECTSI) HSP 1 Score: 354 bits (909), Expect = 2.820e-117 Identity = 219/353 (62.04%), Postives = 247/353 (69.97%), Query Frame = 1 Query: 1 QADSYTFATLSLFGGILFYKGIDLLVHRLDGS-AGDHNVDIDLFDLDEVSDSGVPCNNCPAGAKANNVDASKKGTRAVTGTGSNGGRDLPIPHPQFPHRHDVVVELNSGHNSVRPSADLHTLHLRMAGKVHQSAASPVSALTPDRNGSTAAVGANPGDLENGQPQQXXXXXXTS----------------NGDAAVTPPRDEKLVRMGLMTAVAIGIHNFPEGLATFVATLADPSVGFAXXXXXXXXXXXXXXCVAIPVYYATGNRWKSFGWALLSGVSEPIGAGLGWLILKDVMSELVYGILFGVVAGMMINITIHELIPTAVRYDPADKVTTNSIILGMAIMALSLTLFVY 1008 +ADSY +ATLSLFGG+L YKGIDL+VH L+G DH+VDI L+DLD S S + P A A D K+ A G+N G + FP H+VVVEL S ++VRPS DL+TL L MAGKV SPVS LTP G++ G +E G ++ G AV +EKLVRMGL+TAVAIGIHNFPEGLATFVA L+DPSV XXXXXXXXXXXXXXCVAIPVYYATGNRWK+FGWALLSGVSEPIGAGLGWLILKD+MSELVYG+LFGVVAGMM+NITIHELIPTAVRYDP DKVTTNSII GMAIMALSLTLF+Y Sbjct: 80 EADSYLYATLSLFGGVLLYKGIDLVVHLLEGGPVRDHHVDISLYDLDGSSGSSE---SSPRTAPAATADKKKRKKSAPQLGGANSGNNPNDGREPFPADHNVVVELASRGSAVRPSPDLNTLQLSMAGKVQAQQPSPVSELTPSGGGNSNNKTGVVGFMEEGSGVDQMEEAPSAXXXXXXXAPSGTVQSERGTPAVADGDNEKLVRMGLLTAVAIGIHNFPEGLATFVAALSDPSVXXXXXXXXXXXXXXXXXCVAIPVYYATGNRWKAFGWALLSGVSEPIGAGLGWLILKDIMSELVYGLLFGVVAGMMVNITIHELIPTAVRYDPTDKVTTNSIIAGMAIMALSLTLFLY 429
BLAST of mRNA_H-paniculata_contig14807.2864.1 vs. uniprot
Match: A0A6H5JKG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG5_9PHAE) HSP 1 Score: 207 bits (526), Expect = 5.970e-61 Identity = 125/181 (69.06%), Postives = 139/181 (76.80%), Query Frame = 1 Query: 463 PGDLENGQPQQXXXXXXTSNGDAAVTPPRDEKLVRMGLMTAVAIGIHNFPEGLATFVATLADPSVGFAXXXXXXXXXXXXXXCVAIPVYYATGNRWKSFGWALLSGVSEPIGAGLGWLILKDVMSELVYGILFGVVAGMMINITIHELIPTAVRYDPADKVTTNSIILGMAIMALSLTLFV 1005 P D+E QPQ+ +GD A KLV MGL+TAVAIGIHNFP+GLATFV++LADPSV XXXXXXXXXXXXX CVA+PVYY TG+R K+FGWALLSG +EPIGA LGWLILKDVMSELVYGIL + IH+LIPTAVR+DPADKVTTNSI GMAIMALSL LFV Sbjct: 150 PRDVEQPQPQETTGGANAVSGDEA-------KLVHMGLLTAVAIGIHNFPDGLATFVSSLADPSVXXXXXXXXXXXXXXXXMCVAMPVYYGTGSRCKAFGWALLSGATEPIGAALGWLILKDVMSELVYGILXXXXXXXXXXVVIHDLIPTAVRFDPADKVTTNSISAGMAIMALSLVLFV 323
BLAST of mRNA_H-paniculata_contig14807.2864.1 vs. uniprot
Match: A0A6V2QEW8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QEW8_HETAK) HSP 1 Score: 204 bits (520), Expect = 1.110e-59 Identity = 132/242 (54.55%), Postives = 160/242 (66.12%), Query Frame = 1 Query: 295 HDVVVELNSGHNSVRPSA----DLHTLHLRMAGKVHQSAASPVSALTPDRNGSTAAVGANPGDLENGQPQQXXXXXXTSNGDAAVTPPRDEKLVRMGLMTAVAIGIHNFPEGLATFVATLADPSVGFAXXXXXXXXXXXXXXCVAIPVYYATGNRWKSFGWALLSGVSEPIGAGLGWLILKDVMSELVYGILFGVVAGMMINITIHELIPTAVRYDPADKVTTNSIILGMAIMALSLTLFVY 1008 +D V+ S N+ P A DL TL+L AGK A GS A G+ G L T + P+D +LVRMG++TA+AIG+HNFPEGLATFVATL DPSVG A XXXXXXXXXXXXXCVAIP+YYATG+R K+FGWAL+SG+SEPIGAGLGWL+L V S+++YG AGMM+NI +HELIPTA R+DP D + +N ++ GMAIMALSL LF Y Sbjct: 130 YDQTVDKPSKTNATLPQAVTSPDLTTLNLDKAGKTVAGAGL----------GSPAGKGSRRGMLTTAGSATSLDTEATDGTHSK--EPKDARLVRMGVLTALAIGLHNFPEGLATFVATLDDPSVGGALXXXXXXXXXXXXXCVAIPIYYATGSRAKAFGWALISGISEPIGAGLGWLVLSAVFSDVLYGXXXXXXAGMMVNICLHELIPTAHRHDPKDTIVSNCLVAGMAIMALSLVLFQY 359
BLAST of mRNA_H-paniculata_contig14807.2864.1 vs. uniprot
Match: A0A7S2RNM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNM0_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.200e-58 Identity = 111/166 (66.87%), Postives = 133/166 (80.12%), Query Frame = 1 Query: 523 GDAAVTPPRD------EKLVRMGLMTAVAIGIHNFPEGLATFVATLADPSVGFAXXXXXXXXXXXXXXCVAIPVYYATGNRWKSFGWALLSGVSEPIGAGLGWLILKDVMSELVYGILFGVVAGMMINITIHELIPTAVRYDPADKVTTNSIILGMAIMALSLTLF 1002 G+ + TP D ++LVRMGLMTA+AIGIHN PEGLATFV TL DP+VG XXXXXXXXXXXXXCVAIP+YYAT +RW++F WA +SG+SEPIGAGLGW +L ++ + VYGI+FG+V GMM+NI IHEL+PTA RYDP D+ TT S I GMA+MALSL LF Sbjct: 203 GEESTTPEEDGRTEDSQRLVRMGLMTALAIGIHNLPEGLATFVGTLDDPAVGVGLXXXXXXXXXXXXXCVAIPIYYATHDRWQAFKWAFISGISEPIGAGLGWAVLHSIIDDRVYGIVFGLVGGMMVNICIHELLPTAFRYDPGDRFTTKSFIAGMALMALSLILF 368
BLAST of mRNA_H-paniculata_contig14807.2864.1 vs. uniprot
Match: A0A8J2SXP3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXP3_9STRA) HSP 1 Score: 197 bits (501), Expect = 2.650e-57 Identity = 111/154 (72.08%), Postives = 133/154 (86.36%), Query Frame = 1 Query: 547 RDEKLVRMGLMTAVAIGIHNFPEGLATFVATLADPSVGFAXXXXXXXXXXXXXXCVAIPVYYATGNRWKSFGWALLSGVSEPIGAGLGWLILKDVMSELVYGILFGVVAGMMINITIHELIPTAVRYDPADKVTTNSIILGMAIMALSLTLFVY 1008 +D++L MG+MTA+AIGIHNFPEGLATFVATL DP+VG +XXXXXXXXXXXXXXCV+IP+Y+ATG+RWK+F WALLSGVSE +GA LGW +LKD L+YGI+FG+VAGMMI I ++ELIPTA RYDP D+V T SI+ GMA+MA SL LFVY Sbjct: 167 KDKRLESMGMMTALAIGIHNFPEGLATFVATLDDPAVGASXXXXXXXXXXXXXXCVSIPIYFATGDRWKAFRWALLSGVSEIVGALLGWALLKDHFDNLLYGIVFGMVAGMMIMICLNELIPTAHRYDPRDRVVTKSIVAGMAVMAASLCLFVY 320
BLAST of mRNA_H-paniculata_contig14807.2864.1 vs. uniprot
Match: A0A7S2BFN7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BFN7_9STRA) HSP 1 Score: 198 bits (504), Expect = 4.900e-57 Identity = 106/152 (69.74%), Postives = 130/152 (85.53%), Query Frame = 1 Query: 547 RDEKLVRMGLMTAVAIGIHNFPEGLATFVATLADPSVGFAXXXXXXXXXXXXXXCVAIPVYYATGNRWKSFGWALLSGVSEPIGAGLGWLILKDVMSELVYGILFGVVAGMMINITIHELIPTAVRYDPADKVTTNSIILGMAIMALSLTLF 1002 R + LV+MG+MTA+AIG+HNFPEGLATFV TL DP+VG XXXXXXXXXXXXXXCV+IP+YYAT NRW++F WA +SG+SEPIGA LGW+ L + MS+ Y ++FG+V+GMM+NI IHELIPTAV+YDP DKVT+ S+I GM +MALSL LF Sbjct: 229 RQKALVKMGMMTALAIGLHNFPEGLATFVGTLDDPTVGXXXXXXXXXXXXXXXXCVSIPIYYATKNRWQAFKWAFISGISEPIGAALGWIFLANCMSDSAYAVIFGLVSGMMVNICIHELIPTAVKYDPEDKVTSKSVIAGMLVMALSLVLF 380
BLAST of mRNA_H-paniculata_contig14807.2864.1 vs. uniprot
Match: F0Y6B2_AURAN (Cilia- and flagella-associated protein 206 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6B2_AURAN) HSP 1 Score: 200 bits (508), Expect = 7.270e-54 Identity = 112/151 (74.17%), Postives = 131/151 (86.75%), Query Frame = 1 Query: 550 DEKLVRMGLMTAVAIGIHNFPEGLATFVATLADPSVGFAXXXXXXXXXXXXXXCVAIPVYYATGNRWKSFGWALLSGVSEPIGAGLGWLILKDVMSELVYGILFGVVAGMMINITIHELIPTAVRYDPADKVTTNSIILGMAIMALSLTLF 1002 D+ L RMG+MTA+AIGIHNFPEGLATFVATL DP+VG A XXXXXXXXXXXXXCV+IP+Y+ATG+RWK+F WALLSGVSEP+GA LGWL+LKD +EL+YGI+FG+VAGMM+ I ++ELIPTA RYDP DKV T SI GM +MA SL LF Sbjct: 193 DKPLERMGVMTALAIGIHNFPEGLATFVATLDDPAVGGALXXXXXXXXXXXXXCVSIPIYFATGDRWKAFRWALLSGVSEPVGALLGWLLLKDHFNELLYGIVFGMVAGMMVMICLNELIPTAHRYDPQDKVVTKSITAGMVVMAASLCLF 343
BLAST of mRNA_H-paniculata_contig14807.2864.1 vs. uniprot
Match: B7G5W7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5W7_PHATC) HSP 1 Score: 188 bits (478), Expect = 4.270e-53 Identity = 108/159 (67.92%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 532 AVTPPRDE--KLVRMGLMTAVAIGIHNFPEGLATFVATLADPSVGFAXXXXXXXXXXXXXXCVAIPVYYATGNRWKSFGWALLSGVSEPIGAGLGWLILKDVMSELVYGILFGVVAGMMINITIHELIPTAVRYDPADKVTTNSIILGMAIMALSLTLF 1002 A+ P DE KL+RM L TA+AIGIHNFPEGLATFVA L DP VG XXXXXXXXXXXXCVA+PVYYATGNRWK+FGWA+LSG+SEP+ A LGW +L S+ +YG+LFG+VAGMM+ I+ EL+PTA RYDP D V T + I GM IMALSL LF Sbjct: 230 ALAEPTDESKKLLRMSLNTALAIGIHNFPEGLATFVAALGDPKVGAVLAXXXXXXXXXXXXCVAMPVYYATGNRWKAFGWAMLSGMSEPVAALLGWAVLASSFSDTLYGLLFGMVAGMMVVISTRELLPTAHRYDPEDCVVTYAFISGMCIMALSLVLF 388
BLAST of mRNA_H-paniculata_contig14807.2864.1 vs. uniprot
Match: A0A7S3VFQ6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VFQ6_9STRA) HSP 1 Score: 186 bits (473), Expect = 7.690e-53 Identity = 100/151 (66.23%), Postives = 125/151 (82.78%), Query Frame = 1 Query: 550 DEKLVRMGLMTAVAIGIHNFPEGLATFVATLADPSVGFAXXXXXXXXXXXXXXCVAIPVYYATGNRWKSFGWALLSGVSEPIGAGLGWLILKDVMSELVYGILFGVVAGMMINITIHELIPTAVRYDPADKVTTNSIILGMAIMALSLTLF 1002 ++KLVRMG+ TAVAI +HNFPEGLATFVA L DP +G XXXXXXXXXXXX CVA+P+YYATGNR K+F W LSG+SEP+GA LGWL+L + S+ +YG++FG+VAGMM+ I++ EL+PTA RYDP D V TNSII GMA+++LSL L+ Sbjct: 194 NKKLVRMGMQTAVAIALHNFPEGLATFVAVLEDPKIGAILXXXXXXXXXXXXFCVALPIYYATGNRKKAFWWGALSGMSEPVGALLGWLVLANSFSDAIYGLMFGLVAGMMVMISLKELLPTAYRYDPGDTVVTNSIIAGMAVISLSLVLY 344
BLAST of mRNA_H-paniculata_contig14807.2864.1 vs. uniprot
Match: A0A7S3QH48_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QH48_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.030e-52 Identity = 100/151 (66.23%), Postives = 124/151 (82.12%), Query Frame = 1 Query: 550 DEKLVRMGLMTAVAIGIHNFPEGLATFVATLADPSVGFAXXXXXXXXXXXXXXCVAIPVYYATGNRWKSFGWALLSGVSEPIGAGLGWLILKDVMSELVYGILFGVVAGMMINITIHELIPTAVRYDPADKVTTNSIILGMAIMALSLTLF 1002 ++KLVRMG+ TAVAI +HNFPEGLATFVA L DP +G XXXXXXXXXXXX CVA+P+YYATGNR K+F W LSG+SEP+GA LGWL+L + S+ +YG++FG+VAGMM+ I++ EL+PTA RYDP D V TNSII GM ++ALSL L+ Sbjct: 192 NKKLVRMGMQTAVAIALHNFPEGLATFVAVLEDPKIGAILXXXXXXXXXXXXFCVALPIYYATGNRKKAFWWGALSGMSEPVGALLGWLVLANSFSDAIYGLMFGLVAGMMVMISLKELLPTAYRYDPGDTVVTNSIIAGMVVIALSLVLY 342 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14807.2864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14807.2864.1 >prot_H-paniculata_contig14807.2864.1 ID=prot_H-paniculata_contig14807.2864.1|Name=mRNA_H-paniculata_contig14807.2864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=337bp QADSYTFATLSLFGGILFYKGIDLLVHRLDGSAGDHNVDIDLFDLDEVSDback to top mRNA from alignment at H-paniculata_contig14807:621..1736+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14807.2864.1 ID=mRNA_H-paniculata_contig14807.2864.1|Name=mRNA_H-paniculata_contig14807.2864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1116bp|location=Sequence derived from alignment at H-paniculata_contig14807:621..1736+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14807:621..1736+ >mRNA_H-paniculata_contig14807.2864.1 ID=mRNA_H-paniculata_contig14807.2864.1|Name=mRNA_H-paniculata_contig14807.2864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2022bp|location=Sequence derived from alignment at H-paniculata_contig14807:621..1736+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |