mRNA_H-paniculata_contig14788.2857.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14788.2857.1
Unique NamemRNA_H-paniculata_contig14788.2857.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig14788.2857.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 4.350e-104
Identity = 173/188 (92.02%), Postives = 176/188 (93.62%), Query Frame = 1 
Query:    1 AGCPKKGRGGNGGGSTQVGLSLRSRLCEDLSRFLHLVTERERRTFDAKWVAYQRCKSVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKLTTQGYIFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQ 564
            AG  K+GR   GGG  Q GLSLRSRLCEDLSRFLHLVTERERRTFDAKWVAYQRC++VVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKLTT    FEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQ
Sbjct: 1645 AGGHKRGRSAGGGG--QGGLSLRSRLCEDLSRFLHLVTERERRTFDAKWVAYQRCRAVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKLTT----FEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQ 1826
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BLAST of mRNA_H-paniculata_contig14788.2857.1 vs. uniprot
Match: A0A835ZHQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ3_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.300e-68
Identity = 110/150 (73.33%), Postives = 125/150 (83.33%), Query Frame = 1 
Query:  133 FDAKWVAYQRCKSVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKLTTQ------GYIFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQ 564
            FDAKW+AY RC++VVR LWPRAQ   YGSFVTGL LPWSDLDLVI LPKVR+DAPA TPGALEGRNAIKETWQQELARSL  + WV+ +S+KIISHTAVPVIKLTTQ         FEGQ HNGQA+N+LV  L++ +PALRPLA++LKQ
Sbjct:   19 FDAKWIAYHRCRAVVRSLWPRAQANLYGSFVTGLGLPWSDLDLVIWLPKVRKDAPAVTPGALEGRNAIKETWQQELARSLSAQPWVERDSIKIISHTAVPVIKLTTQFPPVHVDVSFEGQWHNGQASNRLVLGLIEEYPALRPLAIVLKQ 168
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BLAST of mRNA_H-paniculata_contig14788.2857.1 vs. uniprot
Match: A0A7S3XJC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJC8_HETAK)

HSP 1 Score: 177 bits (448), Expect = 1.150e-51
Identity = 93/140 (66.43%), Postives = 103/140 (73.57%), Query Frame = 1 
Query:   34 GGGSTQVGLSLRSRLCEDLSRFLHLVTERERRTFDAKWVAYQRCKSVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKLTTQ 453
            GGG+     +LRSRLCEDL R L  +T  E+R  + K  A+ +CKSVVR LWPRAQV  YGSF TGLSLP SDLDLVICLPKV  DAPA  PG LEGRNAIKETWQQ LA     E WV N S+KIISHTA+PVIKL T+
Sbjct:   62 GGGAA---TALRSRLCEDLFRLLSTITAEEQRLLEYKVAAFHKCKSVVRRLWPRAQVHTYGSFSTGLSLPASDLDLVICLPKVMSDAPAVAPGDLEGRNAIKETWQQNLAGYFRLENWVMNKSIKIISHTAIPVIKLATE 198
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BLAST of mRNA_H-paniculata_contig14788.2857.1 vs. uniprot
Match: A0A2D4C177_PYTIN (NTP_transf_2 domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C177_PYTIN)

HSP 1 Score: 177 bits (448), Expect = 3.340e-48
Identity = 92/175 (52.57%), Postives = 115/175 (65.71%), Query Frame = 1 
Query:   58 LSLRSRLCEDLSRFLHLVTERERRTFDAKWVAYQRCKSVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKLTTQ-------GYIFEGQGHNGQAANQLVKDLVDGFPALRPLALLLK 561
            L  RS+L  D+  F+  +         A+  A + C + V+ LWPRAQV+PYGSFVT L+LP SD+DLVICLPKVRRDAPAD  G LEGRNAIKE+WQQ LAR L  E+WV  +S+K I H A+P+I L T+          FEG GHNG A N +V  ++  FPAL P+ L+LK
Sbjct:  191 LPPRSKLHWDMCEFVSQLQTESNARLSAQMAAIRYCTAAVQSLWPRAQVRPYGSFVTRLALPTSDVDLVICLPKVRRDAPADAAGVLEGRNAIKESWQQNLARKLCQEQWVVQDSVKTIPHAAIPIITLVTKLPFNIRLDISFEGPGHNGLATNNVVFSMIHEFPALAPIMLVLK 365
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BLAST of mRNA_H-paniculata_contig14788.2857.1 vs. uniprot
Match: A0A8K1CMZ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMZ5_PYTOL)

HSP 1 Score: 177 bits (449), Expect = 4.980e-48
Identity = 93/175 (53.14%), Postives = 113/175 (64.57%), Query Frame = 1 
Query:   58 LSLRSRLCEDLSRFLHLVTERERRTFDAKWVAYQRCKSVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKLTTQG-------YIFEGQGHNGQAANQLVKDLVDGFPALRPLALLLK 561
            L  RS+L  D+  F+  +         A+  A + C + V+ LWPRAQV+PYGSFVT L+LP SD+DLVICLPKVRRDAPAD  G LEGRNAIKE+WQQ LAR L  E WV  +S+K I H A+P+I L T           FEG GHNG A N +V  L+  FPAL P+ L+LK
Sbjct:  971 LPPRSKLHWDMCEFVSQLQTESNARLSAQMAAIRLCTAAVQSLWPRAQVRPYGSFVTRLALPTSDVDLVICLPKVRRDAPADAAGVLEGRNAIKESWQQNLARKLRQEPWVQPDSVKTIPHAAIPIITLITSSPYSVRLDISFEGPGHNGLATNDVVLSLIHEFPALAPIMLVLK 1145
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BLAST of mRNA_H-paniculata_contig14788.2857.1 vs. uniprot
Match: A0A1V9ZDK5_9STRA (NTP_transf_2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDK5_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.670e-47
Identity = 98/175 (56.00%), Postives = 114/175 (65.14%), Query Frame = 1 
Query:   58 LSLRSRLCEDLSRFLHLVTERERRTFDAKWVAYQRCKSVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKL-TTQGY------IFEGQGHNGQAANQLVKDLVDGFPALRPLALLLK 561
            L  RS+L  D+  F+  +    ++   A     + C S V+ LWPRAQV+PYGSFVTGLSLP SDLDLVICLPKVRRD PA+ PG LEGRNAIKETWQQ LAR L  E WV   S+K I + ++P+I L TT  Y       FEG GHNG A N LV  LV   PAL PL L+LK
Sbjct:  691 LPPRSKLHWDICEFVSQLQAETQQRMAAHTAVSRFCVSAVQALWPRAQVRPYGSFVTGLSLPSSDLDLVICLPKVRRDEPAEAPGVLEGRNAIKETWQQHLARKLRSEPWVLPESVKTIPNASIPIITLLTTAPYHVRLDISFEGPGHNGLATNDLVLSLVHELPALTPLMLVLK 865
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BLAST of mRNA_H-paniculata_contig14788.2857.1 vs. uniprot
Match: A0A1V9YTG9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTG9_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.670e-47
Identity = 98/175 (56.00%), Postives = 113/175 (64.57%), Query Frame = 1 
Query:   58 LSLRSRLCEDLSRFLHLVTERERRTFDAKWVAYQRCKSVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKL-TTQGY------IFEGQGHNGQAANQLVKDLVDGFPALRPLALLLK 561
            L  RS+L  D+  F+  +    +    A     + C S V+ LWPRAQV+PYGSFVTGLSLP SDLDLVICLPKVRRD PA+ PG LEGRNAIKETWQQ LAR L  E WV   S+K I + ++P+I L TT  Y       FEG GHNG A N LV  LV   PAL PL L+LK
Sbjct:  695 LPPRSKLHWDICEFVSQLQAETQHRLAAHTAVSRFCVSAVQALWPRAQVRPYGSFVTGLSLPSSDLDLVICLPKVRRDEPAEAPGVLEGRNAIKETWQQHLARRLRTESWVVPESVKTIPNASIPIITLLTTSPYNVRLDISFEGPGHNGLATNDLVHSLVHELPALTPLMLVLK 869
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BLAST of mRNA_H-paniculata_contig14788.2857.1 vs. uniprot
Match: T0QGK9_SAPDV (NTP_transf_2 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QGK9_SAPDV)

HSP 1 Score: 172 bits (435), Expect = 3.670e-46
Identity = 98/180 (54.44%), Postives = 115/180 (63.89%), Query Frame = 1 
Query:   52 VGLSL---RSRLCEDLSRFLHLVTERERRTFDAKWVAYQRCKSVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKL-TTQGY------IFEGQGHNGQAANQLVKDLVDGFPALRPLALLLK 561
            V LSL   RS+L  D+  F+  +    +    A     + C S V+ LWPRAQV+PYGSFVTGLSLP SDLDLVICLPKVRRD PA+ PG LEGRNAIKETWQQ LAR L  E WV   S+K I + ++P+I L TT  Y       FEG GHNG + N LV   V   PAL PL ++LK
Sbjct:  676 VPLSLLPPRSKLHWDICEFVSQLQAETQHRLAAHTAVSRFCVSAVQALWPRAQVRPYGSFVTGLSLPSSDLDLVICLPKVRRDEPAEAPGVLEGRNAIKETWQQHLARKLRTEPWVVPESVKTIPNASIPIITLLTTSPYNVRLDISFEGPGHNGLSTNDLVHSFVHELPALTPLMVVLK 855
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BLAST of mRNA_H-paniculata_contig14788.2857.1 vs. uniprot
Match: M4BGH7_HYAAE (NTP_transf_2 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BGH7_HYAAE)

HSP 1 Score: 171 bits (434), Expect = 5.190e-46
Identity = 94/175 (53.71%), Postives = 112/175 (64.00%), Query Frame = 1 
Query:   58 LSLRSRLCEDLSRFLHLVTERERRTFDAKWVAYQRCKSVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKLTTQ-------GYIFEGQGHNGQAANQLVKDLVDGFPALRPLALLLK 561
            L  RS+L  DL  F   +         A+  A+Q C + V+ LWPRAQV+PYGS VT L LP SD+DLVICLPKVRRDAPAD  G LEGRNAIKETWQQ LAR L  E WV ++S+K + H AVP+I L T           FEG GHNG A N +V+ L+  FP L P+ L+LK
Sbjct: 1005 LPPRSKLHWDLCEFAAQLQADSDSRLPAQLAAHQLCTATVQSLWPRAQVRPYGSHVTRLVLPSSDVDLVICLPKVRRDAPADAAGMLEGRNAIKETWQQNLARKLKQEPWVVSDSVKTLPHAAVPIITLLTAPPYNVRLDISFEGPGHNGLATNDVVRALLHEFPPLAPMMLILK 1179
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BLAST of mRNA_H-paniculata_contig14788.2857.1 vs. uniprot
Match: A0A6G0XSV9_9STRA (NTP_transf_2 domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XSV9_9STRA)

HSP 1 Score: 171 bits (433), Expect = 6.790e-46
Identity = 100/177 (56.50%), Postives = 115/177 (64.97%), Query Frame = 1 
Query:   58 LSLRSRLCEDLSRFL-HLVTERERRTFDAKWVAYQR-CKSVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPADTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKL-TTQGY------IFEGQGHNGQAANQLVKDLVDGFPALRPLALLLK 561
            L  +++L  D+  F  HL  E + R   A   A  R C S V+ LWPRAQV+PYGSFVTGLSLP SDLDLVICLPKVRRD PA+ PG LEGRNAIKETWQQ LAR L  E WV   S+K I + ++P+I L TT  Y       FEG GHNG A N LV   +   PAL PL L+LK
Sbjct:  638 LPPKTKLHWDICEFASHLQAETQARL--AAHTAVSRFCVSAVQALWPRAQVRPYGSFVTGLSLPSSDLDLVICLPKVRRDEPAEAPGVLEGRNAIKETWQQNLARKLRSESWVVPESVKTIPNASIPIIALQTTAPYHVRLDISFEGPGHNGLATNDLVHSFLHELPALAPLMLVLK 812
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14788.2857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHG7_ECTSI4.350e-10492.02LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZHQ3_9STRA2.300e-6873.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XJC8_HETAK1.150e-5166.43Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2D4C177_PYTIN3.340e-4852.57NTP_transf_2 domain-containing protein (Fragment) ... [more]
A0A8K1CMZ5_PYTOL4.980e-4853.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9ZDK5_9STRA1.670e-4756.00NTP_transf_2 domain-containing protein n=1 Tax=Ach... [more]
A0A1V9YTG9_9STRA1.670e-4756.00Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
T0QGK9_SAPDV3.670e-4654.44NTP_transf_2 domain-containing protein n=1 Tax=Sap... [more]
M4BGH7_HYAAE5.190e-4653.71NTP_transf_2 domain-containing protein n=1 Tax=Hya... [more]
A0A6G0XSV9_9STRA6.790e-4656.50NTP_transf_2 domain-containing protein n=2 Tax=Aph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14788contigH-paniculata_contig14788:336..5634 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score337.8
Seed ortholog evalue3.2e-90
Seed eggNOG ortholog2880.D7FHG7
KEGG koko:K03514,ko:K11700
KEGG Pathwayko03018,map03018
KEGG ModuleM00393
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000819,GO:0003674,GO:0003824,GO:0004652,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005844,GO:0006139,GO:0006325,GO:0006342,GO:0006355,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007080,GO:0008150,GO:0008152,GO:0008608,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016740,GO:0016772,GO:0016779,GO:0019219,GO:0019222,GO:0022402,GO:0030702,GO:0030880,GO:0031047,GO:0031048,GO:0031123,GO:0031124,GO:0031134,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031379,GO:0031380,GO:0032991,GO:0034641,GO:0035770,GO:0036464,GO:0040029,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045495,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050000,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051276,GO:0051303,GO:0051310,GO:0051315,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0060255,GO:0060293,GO:0061695,GO:0065007,GO:0070566,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0098813,GO:0140014,GO:1901360,GO:1902494,GO:1902679,GO:1903047,GO:1903506,GO:1903507,GO:1990141,GO:1990234,GO:1990758,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.RNA uridylyltransferase activity
EggNOG OGsCOG5260@1,KOG1906@2759
EC2.7.7.19
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03016,ko03019,ko03036
Exons5
Model size564
Cds size564
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14788.2857.1prot_H-paniculata_contig14788.2857.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14788 336..5634 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929177.5921834-CDS-H-paniculata_contig14788:335..4381622929177.5921834-CDS-H-paniculata_contig14788:335..438Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14788 336..438 -
1691480761.1984975-CDS-H-paniculata_contig14788:335..4381691480761.1984975-CDS-H-paniculata_contig14788:335..438Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14788 336..438 -
1622929177.6040387-CDS-H-paniculata_contig14788:2031..21121622929177.6040387-CDS-H-paniculata_contig14788:2031..2112Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14788 2032..2112 -
1691480761.2118516-CDS-H-paniculata_contig14788:2031..21121691480761.2118516-CDS-H-paniculata_contig14788:2031..2112Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14788 2032..2112 -
1622929177.6230633-CDS-H-paniculata_contig14788:2970..30711622929177.6230633-CDS-H-paniculata_contig14788:2970..3071Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14788 2971..3071 -
1691480761.2208726-CDS-H-paniculata_contig14788:2970..30711691480761.2208726-CDS-H-paniculata_contig14788:2970..3071Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14788 2971..3071 -
1622929177.6352108-CDS-H-paniculata_contig14788:3974..40521622929177.6352108-CDS-H-paniculata_contig14788:3974..4052Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14788 3975..4052 -
1691480761.2296445-CDS-H-paniculata_contig14788:3974..40521691480761.2296445-CDS-H-paniculata_contig14788:3974..4052Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14788 3975..4052 -
1622929177.6498392-CDS-H-paniculata_contig14788:5433..56341622929177.6498392-CDS-H-paniculata_contig14788:5433..5634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14788 5434..5634 -
1691480761.2381063-CDS-H-paniculata_contig14788:5433..56341691480761.2381063-CDS-H-paniculata_contig14788:5433..5634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14788 5434..5634 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14788.2857.1

>prot_H-paniculata_contig14788.2857.1 ID=prot_H-paniculata_contig14788.2857.1|Name=mRNA_H-paniculata_contig14788.2857.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp
AGCPKKGRGGNGGGSTQVGLSLRSRLCEDLSRFLHLVTERERRTFDAKWV
AYQRCKSVVRGLWPRAQVKPYGSFVTGLSLPWSDLDLVICLPKVRRDAPA
DTPGALEGRNAIKETWQQELARSLGGERWVDNNSLKIISHTAVPVIKLTT
QGYIFEGQGHNGQAANQLVKDLVDGFPALRPLALLLKQ
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mRNA from alignment at H-paniculata_contig14788:336..5634-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14788.2857.1 ID=mRNA_H-paniculata_contig14788.2857.1|Name=mRNA_H-paniculata_contig14788.2857.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5299bp|location=Sequence derived from alignment at H-paniculata_contig14788:336..5634- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAGGATGCCCGAAGAAAGGAAGAGGGGGCAACGGCGGCGGCAGTACTCA
GGTCGGACTGTCGCTCCGATCCAGGCTCTGCGAAGACCTCTCACGATTCT
TGCACCTTGTGACGGAAAGAGAACGACGGACGTTCGACGCTAAGTGGGTT
GCATACCAACGCTGCAAGTCCGTGGTACGCGGACTGTGGCCTCGAGCACA
GGTGAAAGAAGAGAAACACAAAAAAATAGTGTTGGCCACTTTTTTTTTTT
TTGCGCGGGCGAGATTTTTTTTTTTTTTACTAATATTTATGGTACTACAT
TTTCAAAGACTGTGGTTGATCACCTTTGGTTGATATGTTTACAATTGTAG
ATTGAAGTCAGTTACATAACCGTATAATGGGTAAAATGCACTTATTACAT
GATGCGCGTCAGAGCTATAGTTTAACTGTGTGTGGCAAGGGGTTGACTTA
CAGATTTGAGAGCTTGAGTCAGTGATTTTTTTATTTTTTTTCGGGGTGTC
GGTCGTTCGTTTGTAAACTATTTCATGTTTTACCTACAGTACACATGCGA
GTGATACAGTGATACCCCCCCTCCCTTGTGAGGATTGCTGTAGTCCATGT
CGTGCGTGTTGGAAGAGGCGCGAGAGGTTCCAGTACTTGGGGTCATGATG
GGTGTGTCAGAGTGTCGGTCATGTGAACTAGGCCCTGCCAATCTACCAAG
CAGCAAACCCACACATTCTTCAAGTCCATAATTATTACTTCGTCCCCCCC
CCCCGAGTACCACCCTTTGTCAAAACGAACGTACAGTTGTGTTGTTGTTA
ATGGGTACGGAGTGTGCTACTTATGTGTTGTTGCGTTTCTTTAAGTAAAG
GATATCCCCCCCCCCCGCCGCCGCCGCCTTCGTCTTCCGAAGAGGTGCTT
CGAGGGAATCGTAACAATGTCTCGAACGTTACCGTACGGGGGTGTTATCC
CCTATGAATAACAGTACCACCCACCGGTTTCTCGAAAAGTACATGCTGGT
GCTTACACCGACATTTGCTGTGTATCGTTGGAAATATCGAATCCCGTCGG
GATGTAGTAGTATCTGTCATTAGATAGACGAGTTCATTCGATGGTCAGTG
TAGGGTCTCTTGCTTCATGAGAAAGTAGGGGTTCGAAGAGAGTCATCATC
CAGGGTGATTGCTATATTGTGTGATTAACTACCGTACACTCCCCCCCTAT
TATGTCATGATCCAGTCTGATTCGGTGAAAGTTAGCTGCACACGTGAAAG
GGAGTCCCCCCCCCCGTCAAAACGTCAAACGTTTCGTGTTTTCCCTGCTT
GTACTAGGCAACCTAAGAAGTTGTACTGGGGCCTCCACGGTGATCATGTG
CATATCTTTGTCGGTGTTACTTTCTATTAGGTCATTGTACAGTACGTATA
TTCACGTTACACGCGCGATTTAGATGCTGTAAATATAGTCATGAACCATG
TGTACTTGCTCGTGAACGGCGTAAGTAACACGCTTTTATCATGGCAGATT
GTGACTATTTCTCTCTATCTCTCCCTTCTCCCCTTGCTATATCTCCGGGC
GTTGACTGATGTATTGTGTCATGATCCATCAGGTGAAGCCGTACGGTTCT
TTCGTGACTGGCCTATCTCTACCGTGGAGCGACCTTGATTTGGTCATATG
CCTGCCGAAGGTGTGCACGTGGAGTTTTACCAAAAGCTTCTAGGACGTGG
GTGTTCCCCTCTAACTGTCAGATACATTAGTTCGAATCCCCTTGTGTATT
TCTTTTTTTTGGAAATCGCTTCTCCTTTTGTTGGAACCCGCGTCTCAAAT
TGTGCGTATGCTTAGATACTGATCTCTCTGCCTGTGCTTAAGCTGTTGTT
GTTGTTATTGTTGTTGTTGTTGTTGTTGCGCACACATGGAATACCAATGG
TCTTTCCAGAATGTTGTTCGGTGTGTATGATATGGTTCAGAACGAGCTTC
CCCGAAAACGCTTTGTCAAGAGCGTGGAATAAATTGTCAAGACGTGATCA
TCAATTCTAATGAAAGATCCATTCAGAGAATCTGTGCTGTGTCTGTGTCT
GTGTCGTTCGTGTGTGGGTTGTCGTTAAAGTTGCTTGTACAGGTGAAGTT
GTAGGGTCATGATTCAGAGAGTCTGCTCTCTCGCGTCTACCGATAACCTC
ATATAACTCTGTCATTCTCTACGCAAAGGGCCAAATCCAACGCAGAATAC
ATACGTATGCAATGTTTGTGACCTCCTTCTGATGCATTTAATTTTTTTTT
CCACACACATGGTTGATTGGTTCCAAGTACCCCTCCATCTCCCCCCCCCC
CGAGGCGATAGGCTAGCTTGCGGGTCAATCAAATGTCCATTTGATCAAAG
TACAGTACACATGCGGGGAGCGAAGATCATCACTCACCTTGTGAACGCGC
TGGCCAACACGTATGTATGCCTTGTTCAGATTAAAATACTTGCCAAGCAT
TGTGTAAATAACATCGCGGGGCAATAAACATCAAGTATTGTGTAAACAGT
ACTGCGGGACAATGGCAAGTATATATATATATATATATGAAATACACGTG
CGGGACAATACAGGTTCGAAGGGACGCTCCCGCTGACACTCCCGGTGCCC
TGGAGGGAAGGAACGCTATCAAGGAAACATGGCAGCAGGAGCTCGCACGT
AGCTTGGGCGGAGAGTGAGTTATTTTCGTGGTGCTTGTGCGTGCTTGCTT
GTCTTGAGTCTCGGTCGTAGCAAGTATCAAATGTCACAGAGAACGGGCAT
ATATGAGGTATGACCTCATAGAGCTACACCATTTGAGCTATGACGTGAAG
AGTAGCGGTATTTTTTATTAAGGGGGGGGGGGGGGGGGGATACTCATGTA
TTGCGTGTCGTAGGCGATGGAACATTGTCCATGCGCCCTCGGGAGGACAA
GGCTTTGTTGCTGTCAGAGCGATATCTGATGGCCAATCGCTCTGAGGCGG
CGTGGGGGGCATGAACGACTGACACCCCCGAAAAATGAGGGCTCTTGACG
TCACAAAACGTTATTAGTGAGAAATCGTGAAGTAATATAGACAGGGGGCC
ACCGTTGTTTGGCCGCGAAACATTCGGGATCTTCAGCTCAGGAGAGCAAT
CGCGGTATGTTTTTTGGCAAAATGTGTTTTTTTTGTATCACATACCAGCA
ATGATGGCGGGCTTTCCCGGAAGTGACAGGCGATTTTTGAAAGGACCAGC
CGCTGTCGACGCGTAAAATCCTCTCGTGTTGTTGTTGGGTTATATATATA
TATATATATTTAAATTTCAGGGGCATTTTGTGTTCGTTGTTACTCGCTCT
CTCTTTTGTCAGCTGCTTTCGATCCTAGTGTCTTTTTTTTCGACGCACCA
ACCCCCCGCTCCCCCTTCGACTAAACATCTATTAAATGCGTATCAACAAC
CTCTTGTCTCGCAGGTCAATACTAAGTTTTAATTCGTACCCCCCCCGCGC
CCCCCTCATCGATCCCACGCGCTAATTACCATGGACACATCCTCCTCGTT
CCAAACACACGTGAACCTGCAGGCGTTGGGTAGATAACAACTCGCTCAAG
ATTATCAGTCACACTGCTGTGCCAGTCATCAAGCTCACAACGCAAGGCTA
CATGTCAGGCTTCACGCGGTCCGTCCCTCCACCCGGCTTCACCGGCGGGG
GGGGGGCGGCGGGTAGCGGGCGCAGCAGAAGCCCTAACGCCAATGCTAGC
ACCAACCCAAACACGAGCGACATGGGCCCGCCGCGGCACAGTAGCCCCAG
CCTGCGGCCGACGCTCTCCGCTTCGCTCCCCGGCACTCCCAAGATACCCC
CGCGCCCGCCGCGGACTAGCGCCCCGCTGACACCCCCTGCGCCGGTGCTG
CCGCTGCCGCCGGTTCTACCGTCGACCTTACCCACAATGGTGTCTGGCGA
TCAGCCGCTGGGTAACCACGGTGGCAGGGTCGAGGAAGGCGGGACTATAA
CTGCGGGGTTTGCGGCAGGCGAGGTGGGAAAAGCGACGAGCGAGCGTGTG
CGAGGGGTGTTTGGAGATCATCATCGTCGTTCTGCGAGCTACGACAGAGG
GAGCAGTAGTGCGGCCGCTGCGGCGGGTAGTGGCAGCGGCGGCGGCGGTG
GTGGTGGCCGGGCGTCCGGGTTTATTCGGGGTGCTCTTCCTCCTTCTCCT
GCTGCTGCTGGTGAAGAAGGCCAGACTCGAGCGGTGTGGAAAGGTGGCAG
TGATACCGGAGGTTATACACGGAAAGTCGAGGGAACAGGTCCACAGGAAG
ATGGAGACGGTCATGTGGTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGC
GGCGGTGTTGGGCAGAAAGCGGGGCAGCGGTCGGACGTGAGCTCGAGCGT
CAAGGGCGAGGTTTCTGCGGCGCCTACAGGACCTGCTGTGCCTGCCGTTG
TGAATGTAGATGTGGTGCCGCCGCCGCCACCGGCTGCCCCTCCGGGGCTG
AGTGAAACACCCCGTGTGGTTTCAGAAAGCGTGGACGCCTATGCGGCCAG
TGATGTCAATGATGGTAGCTGGCCGGTACCGTCATCATCCAAAGACTCAG
ACGAAGGACAAGGCGAGGTGGGGATGGCTATGCACGTGGGCGAGACGACG
CCAGCACACAGCAACACCACTACCAACAACAACAATGAAAATGACAACGA
CGGTGGCGATCACAATGATGAACACCACAACAACGATGCCGAAAATGCAT
CAGATGGACCATCATTATTACCAAGTAACTTAAACATGACGCCAAAAACA
AGACCAACTACAACCGTTGTTGTTTCAGCAAATACGCCGGCTGCGGAACA
GCAGGAGATGCCCAACACCACCGACAATACCAATGCCAACACCAACAACC
CCTCTGCCAACATTGCCAATAGCCAACCTCTTGTCAACAACTCTCTTCCT
GCCGCCACGGAGCCGGCTTCAACAGACATGCCGCCGCCACCGCCGCCACC
GCCGCCACCGCCACCACTGCCCCTCGGAAGCGAAACCATGGAGAACAACA
ATAACAATAACGCCTTCCTGGATGATGACAAAGATGGCACACCAACCGGT
GGCGGACAGGGTGCAAGCGAGAGGGCTGGAGAGGGACCTGTGGCCCCGAA
TGGCGTCGGCGGCGGTGGTGGTGGTGGGGTAGGCGTCAGCGTAGGTGTAG
GGGTTGATGGCGGCGGCAGCTATCCGCGCGTGCTGGTCGATGTGAGCTTC
GAGGGACAGGGACACAATGGGCAGGCAGCGAATCAACTGGTGAAGGACCT
GGTCGATGGCTTCCCCGCGCTCAGGCCGTTGGCGTTGTTGCTCAAGCAG
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Coding sequence (CDS) from alignment at H-paniculata_contig14788:336..5634-

>mRNA_H-paniculata_contig14788.2857.1 ID=mRNA_H-paniculata_contig14788.2857.1|Name=mRNA_H-paniculata_contig14788.2857.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1128bp|location=Sequence derived from alignment at H-paniculata_contig14788:336..5634- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAGGATGCCCGAAGAAAGGAAGAGGGGGCAACGGCGGCGGCAGTACTCA
GGTCGGACTGTCGCTCCGATCCAGGCTCTGCGAAGACCTCTCACGATTCT
TGCACCTTGTGACGGAAAGAGAACGACGGACGTTCGACGCTAAGTGGGTT
GCATACCAACGCTGCAAGTCCGTGGTACGCGGACTGTGGCCTCGAGCACA
GGCAGGATGCCCGAAGAAAGGAAGAGGGGGCAACGGCGGCGGCAGTACTC
AGGTCGGACTGTCGCTCCGATCCAGGCTCTGCGAAGACCTCTCACGATTC
TTGCACCTTGTGACGGAAAGAGAACGACGGACGTTCGACGCTAAGTGGGT
TGCATACCAACGCTGCAAGTCCGTGGTACGCGGACTGTGGCCTCGAGCAC
AGGTGAAGCCGTACGGTTCTTTCGTGACTGGCCTATCTCTACCGTGGAGC
GACCTTGATTTGGTCATATGCCTGCCGAAGGTGAAGCCGTACGGTTCTTT
CGTGACTGGCCTATCTCTACCGTGGAGCGACCTTGATTTGGTCATATGCC
TGCCGAAGGTTCGAAGGGACGCTCCCGCTGACACTCCCGGTGCCCTGGAG
GGAAGGAACGCTATCAAGGAAACATGGCAGCAGGAGCTCGCACGTAGCTT
GGGCGGAGAGTTCGAAGGGACGCTCCCGCTGACACTCCCGGTGCCCTGGA
GGGAAGGAACGCTATCAAGGAAACATGGCAGCAGGAGCTCGCACGTAGCT
TGGGCGGAGAGCGTTGGGTAGATAACAACTCGCTCAAGATTATCAGTCAC
ACTGCTGTGCCAGTCATCAAGCTCACAACGCAAGGCTACATGCGTTGGGT
AGATAACAACTCGCTCAAGATTATCAGTCACACTGCTGTGCCAGTCATCA
AGCTCACAACGCAAGGCTACATCTTCGAGGGACAGGGACACAATGGGCAG
GCAGCGAATCAACTGGTGAAGGACCTGGTCGATGGCTTCCCCGCGCTCAG
GCCGTTGGCGTTGTTGCTCAAGCAGCTTCGAGGGACAGGGACACAATGGG
CAGGCAGCGAATCAACTGGTGAAGGACCTGGTCGATGGCTTCCCCGCGCT
CAGGCCGTTGGCGTTGTTGCTCAAGCAG
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