mRNA_H-paniculata_contig14761.2844.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14761.2844.1 vs. uniprot
Match: A0A7N2MM16_QUELO (Uncharacterized protein n=4 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2MM16_QUELO) HSP 1 Score: 171 bits (434), Expect = 2.310e-42 Identity = 148/511 (28.96%), Postives = 240/511 (46.97%), Query Frame = 1 Query: 13 CKGCSKAKAHRLPVPKATDTTATEKLERLYVGLMRAFREPSFGNKNYAMIFVDDYTRMIFNRFLRNKNDKAEAFKRFIADVATPAEVKISIIHTDEGGEFEGR-FQELLDELAITHEHTPRRNPQYNGVVNRTLGLLKEETIIMLEDLREGHNGKLWAEVLSMAKEITNICTTTVNEDKISPYEMSNGKVFSMDNIQPFGTMGY-NCTTTRKHKLEPGKMHHAWTGRQPPERHVRSARPQKRRILFRREVT--------WHPEMTQDRE----SSXEHENKGEGAHLPDGRREGPPSTNLTSLRSGDIMAMQVALVLPEG--LASFLPP--------------------EPTTIKEAQASPEWTHRKGVTEVEINDLAANGV*DQVERP--KLVVGTKMLFKRTIDQNGEVEQNKKCRMVAQRFRQVKGLHFQETFSPRLAAASIRMILATAAMENLQLPHLDVEQALIRADVDEKIYIELPEEYQPFA--GAMGKLIKAIYGLEQAGRCW 1425 C+GC K H LP PK T A LE ++ + R PS NK Y ++FVDDYTRM++ FL K++ F +F A V + ++ I+ TD GGEF + F + E I + T RR PQ NGV R ++E ML+ +G LWAE ++ A I N T DK +P+E + + ++ ++ FG + Y + + + K + + + G + R P+ +++ R+V W + + + +S + ++K LP E P + RS + VLP S PP EP T ++A W K + E EI + N + V+ P + V+G K ++K +++G ++++K R+VA+ + Q G+ F ETF+P + +IR LA AA L++ LDV+ A + D++E++Y+E P+ Y + +L KA+YGL+QA R W Sbjct: 519 CEGCIYGKMHCLPFPK-TAWRARAPLELVHADICGPTRTPSLSNKRYFLLFVDDYTRMMWIYFLDQKSEAFSFFLQFKALVERQSGHQMKILRTDRGGEFIYKPFMQYCKENGIQRQLTVRRTPQQNGVAERKNRTIEEMARSMLKG--KGLPNMLWAEAVNTAAYILNRSPTKAIRDK-TPFEAWHKQKPMVNQLKVFGCIAYAHIPSQEREKFDEKGEKYIFIGYSDESKGFRLLNPKTNKLVIARDVIFDELAAWQWEENVQESKNLEVPASLDFQDKSNS--LPSMNSEEAPRATSSPTRSS-------STVLPNADTYDSDSPPRKFRSLLDIYQSCEFALFASEPQTFEDAAKENVWA--KAMDE-EIASIEKNQTWELVDLPNGRDVIGLKWIYKTKYNEDGSIQKHK-ARLVAKGYSQQPGVDFHETFAPVVRMETIRTFLALAAQMELEVFQLDVKSAFLNGDLEEEVYVEQPKGYMKKGKEDKVYRLCKALYGLKQAPRAW 1012
BLAST of mRNA_H-paniculata_contig14761.2844.1 vs. uniprot
Match: A0A4Y1RZ63_PRUDU (Transposable element protein n=2 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RZ63_PRUDU) HSP 1 Score: 169 bits (427), Expect = 3.230e-42 Identity = 151/517 (29.21%), Postives = 238/517 (46.03%), Query Frame = 1 Query: 13 CKGCSKAKAHRLPVPKATDTTATEKLERLYVGLMRAFREPSFGNKNYAMIFVDDYTRMIFNRFLRNKNDKAEAFKRFIADVATPAEVKISIIHTDEGGEFEGR-FQELLDELAITHEHTPRRNPQYNGVVNRTLGLLKEETIIMLEDLREGHNGKLWAEVLSMAKEITNICTTTVNEDKISPYEMSNGKVFSMDNIQPFGTMGY-NCTTTRKHKLEPGKMHHAWTGRQPPERHVRSARPQKRRILFRREVT------WH---------------PEMTQDRESSXEHENKGEGAHLPDGRREGPPST----NLTSLRSGDIMAMQVAL---------------VLPEGLASFLPPEPTTIKEAQASPEWTHRKGVTEVEINDLAANGV*DQVERP--KLVVGTKMLFKRTIDQNGEVEQNKKCRMVAQRFRQVKGLHFQETFSPRLAAASIRMILATAAMENLQLPHLDVEQALIRADVDEKIYIELPEEY--QPFAGAMGKLIKAIYGLEQAGRCW 1425 C+GC K HR PK A++ LE ++V L R S Y M+ +DD+TRMI+ FLRNK++ FK+F + K+ I +D GGEF F E + I + T PQ NGVV R + E ML + +G LW E + A + N C T + I+P+E +G+ + +++ FG++ Y + T +HKLEP + G E+ R P ++L R+VT WH ++ D +S +EN G P T TS GDI + + VL + + PE K A A+ + + K + E E+ + N + V+RP K V+G K ++K ++ +G V++NK R+VA+ + Q GL + ET++P +IR ++A AA + +L LDV+ A + + E++Y+ PE + + + +L KA+YGL+QA R W Sbjct: 110 CEGCQFGKQHRNVFPKDQAQRASKVLELVHVDLCGPMRNESVARNRYFMLIIDDFTRMIWVYFLRNKSEAFYCFKKFKSMTELQTGHKVQCIRSDRGGEFLSTDFLEFCEANGIQRQLTMAYTPQQNGVVERKNRTVIEMAKSMLHE--KGMPYFLWTEAVHTAVYLLNRCPTKALNN-ITPFEAYSGRKPGIAHLKVFGSLCYVHVPTELRHKLEPKSTKGVFVGYATCEKGYRVFDPVSNKLLLSRDVTFDEENAWHWTDKDGSVMTSYSIEDQVDLDLKSDSSNENST-----------GTPQTLDMQESTSSTPGDISSEERRTQAYDHTPLKWRRLDDVLAQCNLCIMEPE----KYADAAQDESWLKAM-EDELQMIEKNETWELVDRPTEKPVIGVKWVYKTKLNLDGSVQKNK-ARLVAKGYAQKPGLDYNETYAPVARLDTIRTLIALAAKKGWKLFQLDVKSAFLNGVLQEEVYVNQPEGFVIKGKEDKVYRLHKALYGLKQAPRAW 606
BLAST of mRNA_H-paniculata_contig14761.2844.1 vs. uniprot
Match: Q9LH44_ARATH (Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9LH44_ARATH) HSP 1 Score: 166 bits (421), Expect = 1.190e-40 Identity = 143/519 (27.55%), Postives = 233/519 (44.89%), Query Frame = 1 Query: 13 CKGCSKAKAHRLPVPKATDTTATEKLERLYVGLMRAFREPSFGNKNYAMIFVDDYTRMIFNRFLRNKNDKAEAFKRFIADVATPAEVKISIIHTDEGGEFEGR-FQELLDELAITHEHTPRRNPQYNGVVNRTLGLLKEETIIMLEDLREGHNGKLWAEVLSMAKEITNICTTTVNEDKISPYEMSNGKVFSMDNIQPFGTMGY-NCTTTRKHKLEPGKMHHAWTGRQPPERHVRSARPQKRRILFRREVTWHPEMTQDRESSXEHENKGE---------------------GAHLP-----------------DGRREGPPSTNLTSLRSGDIMAMQVALVLPEGLAS----FLPPEPTTIKEAQASPEWTHRKGVTEVEINDLAANGV*DQVERPK--LVVGTKMLFKRTIDQNGEVEQNKKCRMVAQRFRQVKGLHFQETFSPRLAAASIRMILATAAMENLQLPHLDVEQALIRADVDEKIYIELPEEY--QPFAGAMGKLIKAIYGLEQAGRCW 1425 C C K R PK + + + LE ++ + + S Y + F+DD++RM + FL+NK++ FK F V +E +I + TD GGEF R F +L E I HE T +PQ NGV R L E M+E+ + + K WAE ++ + + N + E ++P E+ +GK S+D+++ FG + Y + ++ KL+ + G + R + +I ++VT+ D + + H+ KGE AH+ + EG S RS + + Q V E L + EP ++EA +W E+ + N + V RPK V+ K +F+ D +GE + +K R+VA+ F Q G+ + ETF+P +IR I+A AA + +L +DV+ A + D++E++YIE P + + G + KL KA+YGL+QA R W Sbjct: 491 CAACEMGKQSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYVENQSESRIKRLRTDGGGEFLSREFIKLCQESGIHHEITTPYSPQQNGVAERRNRTLVEMARSMIEEKKLSN--KFWAEAIATSTYLQNRLPSKSLEKGVTPMEIWSGKKPSVDHLKVFGCVCYIHIPDEKRRKLDTKAKQGIFVGYSNESKGYRVFLLNEEKIEVSKDVTF------DEKKTWSHDEKGERKAILSLVKINSQEQGGGNDLNAHIDQVSNAFNQLHISSRGVQNSHEEGEESVGPRGFRSINNLMDQTNEVEGEALIHEMCLMMAEEPQALEEAMKDEKWIE---AMREELRMIEKNKTWEVVARPKDKNVISVKWIFRLKTDASGEAIK-RKARLVARGFTQEYGVDYLETFAPVSRYDTIRTIMAIAAQQGWKLFQMDVKSAFLNGDLEEEVYIEQPPGFIEEKEEGKVLKLHKALYGLKQAPRAW 997
BLAST of mRNA_H-paniculata_contig14761.2844.1 vs. uniprot
Match: A0A0N1ICY1_PAPMA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Papilio machaon TaxID=76193 RepID=A0A0N1ICY1_PAPMA) HSP 1 Score: 166 bits (420), Expect = 1.530e-40 Identity = 146/524 (27.86%), Postives = 227/524 (43.32%), Query Frame = 1 Query: 4 WRPCKGCSKAKAHRLPVPKATDTTATEKLERLYVGLMRAFREPSFGNKNYAMIFVDDYTRMIFNRFLRNKNDKAEAFKRFIADVATPAEVKISIIHTDEGGEFEGR-FQELLDELAITHEHTPRRNPQYNGVVNRTLGLLKEETIIMLEDLREGHNGKLWAEVLSMAKEITNICTTTVNEDKISPYEMSNGKVFSMDNIQPFGTMGYNCTTTRKHK-LEPGKMHHAWTGRQPPERHVRSARPQK-RRILFRREVTW----------------------------------------HPEMTQDRESSXEHENKGEGAHL---PDGRREGPPSTNLTSLRSGDIMAMQVALVLPEGLASFLPPEPTTIKEAQASPEWTHRKGVTEVEINDLAANGV*DQVERP--KLVVGTKMLFKRTIDQNGEVEQNKKCRMVAQRFRQVKGLHFQETFSPRLAAASIRMILATAAMENLQLPHLDVEQALIRADVDEKIYIELPEEYQPFA--GAMGKLIKAIYGLEQAGRCW 1425 + PC C K K RLP PK + T ATEKL ++ L SF Y + F+DDYTRM F F+RNK++ FK F V +KI ++ TD G E+ + FQ L E I H+ T +PQ NGV R + E ML++ G + + WAE L+ A I N + +P E +G ++ N++ FG + Y K K L+ + + G + R P+ + + R+V + +P + S + G PD P T S S D +++ VA+ EP TI++A + P+ H + E N + P K V K +FK+ + GE+ + K R+VA+ F Q G+ ++ET+SP + ++IR ++A A +L + H+DV+ A + D+ E +Y+ P+ Y+ + KL KAIYGL+QA + W Sbjct: 459 YTPCVACLKGKQSRLPFPKQSYTRATEKLGLIHSDLCGPMSVNSFSGAKYLLTFIDDYTRMTFGYFIRNKSEVLPVFKIFKKFVENQTNLKIKMLRTDNGREYVNKDFQLFLQEHGIKHQTTVPYSPQQNGVAERANRTIIEAGRCMLQEA--GLDRRFWAEALNTAIYIKNKSPSKAVRGT-TPEEKWSGNKVNLSNLRTFGCVAYAMIPNEKRKKLDAKCKQYIFVGYCSESKGYRLIDPENPSKCIKSRDVQFLEGKMYKNLVLNKGNKTSDCELNISSNEDDLNSNDINDQVNPTSVIESSDSNSADTSASGCSFIDDPDDVTWNPDMTLQQSSDSDDTVSIAVAMTACHN------GEPQTIQDALSGPDAEHWRKAIADEYKSFEKNKAWNLTLLPAGKKAVKCKWVFKKKLGSEGELL-HYKARLVAKGFTQEYGIDYKETYSPVVRYSTIRTLIALAVNLDLYIDHMDVKTAFLNGDLRETVYMVQPDGYKVKGKENYVFKLNKAIYGLKQASKAW 972
BLAST of mRNA_H-paniculata_contig14761.2844.1 vs. uniprot
Match: A0A4Y1R3A1_PRUDU (BURP domain-containing protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R3A1_PRUDU) HSP 1 Score: 166 bits (419), Expect = 1.650e-40 Identity = 146/510 (28.63%), Postives = 230/510 (45.10%), Query Frame = 1 Query: 13 CKGCSKAKAHRLPVPKATDTTATEKLERLYVGLMRAFREPSFGNKNYAMIFVDDYTRMIFNRFLRNKNDKAEAFKRFIADVATPAEVKISIIHTDEGGEFEGR-FQELLDELAITHEHTPRRNPQYNGVVNRTLGLLKEETIIMLEDLREGHNGKLWAEVLSMAKEITNICTTTVNEDKISPYEMSNGKVFSMDNIQPFGTMGYN-CTTTRKHKLEPGKMHHAWTGRQPPERHVRSARPQKRRILFRREV------TWHPEMTQDR--ESSXEHENKGEGAHLPDG---RREGPPSTNLTSLRSGDIMAMQVALVLPEGLASFLPP----------------------EPTTIKEAQASPEWTHRKGVTEVEINDLAANGV*DQVERP--KLVVGTKMLFKRTIDQNGEVEQNKKCRMVAQRFRQVKGLHFQETFSPRLAAASIRMILATAAMENLQLPHLDVEQALIRADVDEKIYIELPE--EYQPFAGAMGKLIKAIYGLEQAGRCW 1425 C+GC K+HR P A LE ++ + + S G Y + F+DDY+RM + FLRNK+ FK+F V + + + +D GGE+ F E +L + + T +PQ NG+ R + E M+ + + K WAE + A + N C TT DK +P+E G+ + +++ FG++ Y+ + + K + + G E+ R Q +I+ R V +W+ E QD + EN G P+G S NL L S D V+ G + P EP T EA W K + EI + NG + VERP K V+G K +FK ++ +G V+++K R+VA+ + Q G+ + ETF+P +IR ++A AA + +L LDV+ A + ++E++Y E PE E + + + KL KA+YGL+QA R W Sbjct: 100 CEGCVYGKSHREPFENEKPWRAKNPLELIHTDVCGPMQNESIGGNKYFITFIDDYSRMCWVYFLRNKSSVISVFKKFKVFVELQSGFNLKKLRSDRGGEYTSHEFLEYCSDLGMERQLTIAYSPQQNGIAERRNRTICEMARSMMTEKKIPV--KFWAEAVGTAVYLQNRCYTTSVTDK-TPFEAFTGRKPGVKHLRVFGSICYSHIPSNLRQKFDDKASKGIFMGYGSCEKGYRIYNLQTEKIILSRSVVFDENKSWNWESKQDETVHVTPIFENGGSEITEPEGTFHETHSIASPNLNQLISDD---EHVSESNGSGTSQGSTPSNTPVKLKSLEDIYARCHMTIIEPETYYEAVEDKAW---KEAMDAEIETIEKNGTWELVERPTDKPVIGVKWVFKTKLNLDGTVQKHK-ARLVAKGYAQKPGIDYNETFAPVARLDTIRTLIALAAQKGWKLFQLDVKSAFLNGVLEEEVYTEQPEGFEVKTASHKVYKLKKALYGLKQAPRAW 599
BLAST of mRNA_H-paniculata_contig14761.2844.1 vs. uniprot
Match: A0A4Y1QWW3_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QWW3_PRUDU) HSP 1 Score: 165 bits (418), Expect = 2.040e-40 Identity = 136/491 (27.70%), Postives = 231/491 (47.05%), Query Frame = 1 Query: 13 CKGCSKAKAHRLPVPKATDTTATEKLERLYVGLMRAFREPSFGNKNYAMIFVDDYTRMIFNRFLRNKNDKAEAFKRFIADVATPAEVKISIIHTDEGGEF-EGRFQELLDELAITHEHTPRRNPQYNGVVNRTLGLLKEETIIMLEDLREGHNGKLWAEVLSMAKEITNICTTTVNEDKISPYEMSNGKVFSMDNIQPFGTMGY-NCTTTRKHKLEPGKMHHAWTGRQPPERHVRSARPQKRRILFRREVT--------WH------PEMTQDRESSXEHENKGEGAHLPDGRREGPPSTNLTSLRSGDIMAMQVALVLPEGLASFLPPEPTTIKEAQASPEWTHRKGVTEVEINDLAANGV*DQVERPKL--VVGTKMLFKRTIDQNGEVEQNKKCRMVAQRFRQVKGLHFQETFSPRLAAASIRMILATAAMENLQLPHLDVEQALIRADVDEKIYIELPEEY--QPFAGAMGKLIKAIYGLEQAGRCW 1425 C+GC K HRLP +++ A LE ++ + R PSF NK Y ++FVDD++RM++ FL K++ FK+F A + + ++ TD GGEF F E I E T R PQ NGV R + E ML+ + WAE + A I N T +DK +P+E + +D + FG Y + + ++ K + + + G + R P+ + ++ R+V W P ++ +SS E + + +P P S + T + ++ + S L EP +EA W + + EI + N + V+RPK ++G K ++K +++G ++++K R+VA+ + Q G+ F ETF+P + +IR +LA AA ++ LDV+ A + +++E++Y+E P+ Y + + +L KA+YGL+QA R W Sbjct: 159 CEGCIFGKFHRLPFSQSS-WRAKAPLELVHADICGPTRTPSFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLK--AKSLPNTFWAEAIHTAVFILNRSPTKAVKDK-TPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDELKAWKWENYDIEVPRFFEEPDSSHSEETQFLQSPIPSAGTADPSSPDSTPRLNARTRSLADIYESCDLALSAL--EPQKFEEAVKENIW---QDAMDEEIRVIKKNRTWELVDRPKSKDIIGLKWVYKTKFNEDGSIQKHK-ARLVAKGYSQQPGIDFNETFAPVVRMETIRTVLALAAQLKTKVYQLDVKSAFLNGELEEEVYVEQPQGYVEKGREDKVYRLRKALYGLKQAPRAW 639
BLAST of mRNA_H-paniculata_contig14761.2844.1 vs. uniprot
Match: A0A4Y1R9H3_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R9H3_PRUDU) HSP 1 Score: 165 bits (418), Expect = 2.700e-40 Identity = 136/491 (27.70%), Postives = 231/491 (47.05%), Query Frame = 1 Query: 13 CKGCSKAKAHRLPVPKATDTTATEKLERLYVGLMRAFREPSFGNKNYAMIFVDDYTRMIFNRFLRNKNDKAEAFKRFIADVATPAEVKISIIHTDEGGEF-EGRFQELLDELAITHEHTPRRNPQYNGVVNRTLGLLKEETIIMLEDLREGHNGKLWAEVLSMAKEITNICTTTVNEDKISPYEMSNGKVFSMDNIQPFGTMGY-NCTTTRKHKLEPGKMHHAWTGRQPPERHVRSARPQKRRILFRREVT--------WH------PEMTQDRESSXEHENKGEGAHLPDGRREGPPSTNLTSLRSGDIMAMQVALVLPEGLASFLPPEPTTIKEAQASPEWTHRKGVTEVEINDLAANGV*DQVERPKL--VVGTKMLFKRTIDQNGEVEQNKKCRMVAQRFRQVKGLHFQETFSPRLAAASIRMILATAAMENLQLPHLDVEQALIRADVDEKIYIELPEEY--QPFAGAMGKLIKAIYGLEQAGRCW 1425 C+GC K HRLP +++ A LE ++ + R PSF NK Y ++FVDD++RM++ FL K++ FK+F A + + ++ TD GGEF F E I E T R PQ NGV R + E ML+ + WAE + A I N T +DK +P+E + +D + FG Y + + ++ K + + + G + R P+ + ++ R+V W P ++ +SS E + + +P P S + T + ++ + S L EP +EA W + + EI + N + V+RPK ++G K ++K +++G ++++K R+VA+ + Q G+ F ETF+P + +IR +LA AA ++ LDV+ A + +++E++Y+E P+ Y + + +L KA+YGL+QA R W Sbjct: 396 CEGCIFGKFHRLPFSQSS-WRAKAPLELVHADICGPTRTPSFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLK--AKSLPNTFWAEAIHTAVFILNRSPTKAVKDK-TPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDELKAWKWENYDIEVPRFFEEPDSSHSEETQFLQSPIPSAGTADPSSPDSTPRLNARTRSLADIYESCDLALSAL--EPQKFEEAVKENIW---QDAMDEEIRVIKKNRTWELVDRPKSKDIIGLKWVYKTKFNEDGSIQKHK-ARLVAKGYSQQPGIDFNETFAPVVRMETIRTVLALAAQLKTKVYQLDVKSAFLNGELEEEVYVEQPQGYVEKGREDKVYRLRKALYGLKQAPRAW 876
BLAST of mRNA_H-paniculata_contig14761.2844.1 vs. uniprot
Match: A0A4Y1REW6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1REW6_PRUDU) HSP 1 Score: 162 bits (410), Expect = 2.350e-39 Identity = 143/508 (28.15%), Postives = 229/508 (45.08%), Query Frame = 1 Query: 13 CKGCSKAKAHRLPVPKATDTTATEKLERLYVGLMRAFREPSFGNKNYAMIFVDDYTRMIFNRFLRNKNDKAEAFKRFIADVATPAEVKISIIHTDEGGEFEGR-FQELLDELAITHEHTPRRNPQYNGVVNRTLGLLKEETIIMLEDLREGHNGKLWAEVLSMAKEITNICTTTVNEDKISPYEMSNGKVFSMDNIQPFGTMGYN-CTTTRKHKLEPGKMHHAWTGRQPPERHVRSARPQKRRILFRREVTWHPEMTQDRESSXEH--------ENKGEGAHLPDG---RREGPPSTNLTSLRSGDIMAMQVALVLPEGLASFLPP----------------------EPTTIKEAQASPEWTHRKGVTEVEINDLAANGV*DQVERP--KLVVGTKMLFKRTIDQNGEVEQNKKCRMVAQRFRQVKGLHFQETFSPRLAAASIRMILATAAMENLQLPHLDVEQALIRADVDEKIYIELPE--EYQPFAGAMGKLIKAIYGLEQAGR 1419 C+GC K+HR P A LE ++ + + S G Y + F+DDY+RM + FLRNK+ FK+F V + + + +D GGE+ F E +L + + T +PQ NG+ R + E M+ + + K WAE + A + N C TT DK +P+E G+ + +++ FG++ Y+ + + K + + G E+ R Q +I+ R V ++ + + ES + EN G P+G S NL L S D V+ G + P EP T EA W K + EI + NG + VERP K V+G K +FK ++ +G V+++K R+VA+ + Q G+ + ETF+P +IR ++A AA + +L LDV+ A + ++E++Y E PE E + + + KL KA+YGL+QA R Sbjct: 408 CEGCVYGKSHREPFENEKPWRAKNPLELIHTDVCGPMQNESIGGNKYFITFIDDYSRMCWVYFLRNKSSVISVFKKFKVFVELQSGFNLKKLRSDRGGEYTSHEFLEYCSDLGMERQLTIAYSPQQNGIAERRNRTICEMARSMMTEKKIPV--KFWAEAVGTAVYLQNRCYTTSVTDK-TPFEAFTGRKPGVKHLRVFGSICYSHIPSNLRQKFDDKASKGIFMGYGSCEKGYRIYNLQTEKIILSRSVVFYENKSWNWESKQDETVHVTPIFENGGSEITEPEGTFHETHSIASPNLNQLISDD---EHVSESNGSGTSQGSTPSNTPVKLKSLEDIYARCHMTIIEPETYYEAVEDKAW---KEAMDAEIETIEKNGTWELVERPTDKPVIGVKWVFKTKLNLDGTVQKHK-ARLVAKGYAQKPGIDYNETFAPVARLDTIRTLIALAAQKGWKLFQLDVKSAFLNGVLEEEVYTEQPEGFEVKTASHKVYKLKKALYGLKQAPR 905
BLAST of mRNA_H-paniculata_contig14761.2844.1 vs. uniprot
Match: A0A540NPV2_MALBA (Integrase catalytic domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NPV2_MALBA) HSP 1 Score: 158 bits (400), Expect = 4.280e-38 Identity = 134/492 (27.24%), Postives = 234/492 (47.56%), Query Frame = 1 Query: 13 CKGCSKAKAHRLPVPKATDTTATEKLERLYVGLMRAFREPSFGNKNYAMIFVDDYTRMIFNRFLRNKNDKAEAFKRFIADVATPAEVKISIIHTDEGGEFEG-RFQELLDELAITHEHTPRRNPQYNGVVNRTLGLLKEETIIMLEDLREGHNGKLWAEVLSMAKEITNICTTTVNEDKISPYEMSNGKVFSMDNIQPFGTMGYNCTTTR-KHKLEPGKMHHAWTGRQPPERHVRSARPQKRRILFRREVTWHPEMTQD------RESSX----EHENKGE----GAHLPDGRREGPPSTNLTSLRSGDIMAMQV-ALVLPEGLASFLPPEPTTIKEAQASPEWTHRKGVTEVEINDLAANGV*DQVERP--KLVVGTKMLFKRTIDQNGEVEQNKKCRMVAQRFRQVKGLHFQETFSPRLAAASIRMILATAAMENLQLPHLDVEQALIRADVDEKIYIELPEEY--QPFAGAMGKLIKAIYGLEQAGRCW 1425 C+GC+ K HR P A LE ++ + + + Y +I VDDY+RM + FLR K++ FK+F A V + I ++ +D GGE+ F + ++ + + T PQ NGV R + E ML D +G LW E ++ A + N T EDK +P+E +G+ S+++++ FG++ + + KL+ + G + R ++++++ R+V + + + D RE S E EN+ +P E P + +L S +++ +L +F EP +A W K + EIN + N + V+RP V+G K ++K ++Q+G V++NK R+VA+ + Q G+ FQETF+P +IR +++ AA + L LDV+ A + + E+++++ P+ + + + KL KA+YGL+QA R W Sbjct: 15 CEGCALGKHHRDSFPHGKAWRAKVPLELIHTDVCGPMKTSTQVGNKYFLILVDDYSRMTWVYFLRQKSEVFSIFKKFQAMVERQSGYLIKVLRSDRGGEYTSTEFDKFCQDIGLERQLTVSYTPQQNGVAERKNRTIVEMAKAMLHD--KGIPQYLWGEAVNTAVYLMNRHPTVAVEDK-TPFEAWSGRKPSVNHLRVFGSICFAYVPKELRQKLDESSERCIFVGYASYTKGYRLYNLKRKKVVVCRDVLFSEKSSWDWNQATIREESAQIRIEEENQPNEEEIXXEIPQLSPENSPQAHSPTLSSPSSTPVRLRSLNEVYESCNFCVEEPENFDDAVKEETW---KAAMQEEINVIVKNKTWELVDRPCDNSVIGVKWIYKTKLNQDGSVQRNK-ARLVAKGYSQKPGIDFQETFAPVARHETIRGLISVAAQKGWFLHQLDVKSAFLNGVLKEEVFVDQPQGFVLKGQEHKVYKLKKALYGLKQAPRAW 499
BLAST of mRNA_H-paniculata_contig14761.2844.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT) HSP 1 Score: 156 bits (394), Expect = 3.620e-37 Identity = 136/514 (26.46%), Postives = 231/514 (44.94%), Query Frame = 1 Query: 13 CKGCSKAKAHRLPVPKATDTTATEKLERLYVGLMRAFREPSFGNKNYAMIFVDDYTRMIFNRFLRNKNDKAEAFKRFIADVATPAEVKISIIHTDEGGEFEGR-FQELLDELAITHEHTPRRNPQYNGVVNRTLGLLKEETIIMLEDLREGHNGKLWAEVLSMAKEITNICTTTVNEDKISPYEMSNGKVFSMDNIQPFGTMGY-NCTTTRKHKLEPGKMHHAWTGRQPPERHVRSARPQKRRILFRREVTWHPEMTQD----------RESSXEHENKGEGAHLPDGRREGPPST--------NLTSLRSG--DIMAMQVALVLPE----GLASFLPPE-------------PTTIKEAQASPEWTHRKGVTEVEINDLAANGV*DQVERPK--LVVGTKMLFKRTIDQNGEVEQNKKCRMVAQRFRQVKGLHFQETFSPRLAAASIRMILATAAMENLQLPHLDVEQALIRADVDEKIYIELPEEY--QPFAGAMGKLIKAIYGLEQAGRCW 1425 C+ C++AK HR+PVPK + T+ LE ++ + S G Y + F DDYTR + FL+NK++ E F+ +++ V +K+ + TD GGE+ F + I H+++ PQ NGV R L E M+ N WAE ++ A + N TT K +PYE+ K + N++ FG++ + + + + KL+P + G + + + + + ++V ++ D RE E + + D + P T NL ++ + QV + + F P E P +I EA + K + E N L +N + V P+ V+G+K + K D +G V+++K R+VAQ + Q G+ ++E FSP +SIR +LA A NL++ +DV+ A + ++ IY+ P+ + Q + KL K++YGL+Q+ RCW Sbjct: 409 CEACTRAKMHRIPVPKQSSNRTTQPLELIHSDVCGPMNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEYVSNDFSKYCVNKGIVHQYSNPYTPQQNGVSERLNRTLMESAKSMIFHANMPIN--FWAEAVNTAVYLHNRSPTTSLNMK-TPYELWFSKKPDVSNLKVFGSVCFIHIPSNLRRKLDPRSRKAVFIGYPLDTKGYKLYDIESKNFVRSKDVVFYENKFHDFKVVTKELIIREDVPEEKLSVDHEQHHDAEDQVPVPTVPDIEDEENLPAVGESYEESFMKQVENLETKRQRKAPKKFSPDECNITESLTAENEEPQSISEALNGANASKWKQALKEEYNSLISNETWELVPPPEGCNVIGSKWVMKIKRDADGNVDRHK-ARLVAQGYSQTPGIDYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGFVDQEHPEYVCKLKKSLYGLKQSARCW 918 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14761.2844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14761.2844.1 >prot_H-paniculata_contig14761.2844.1 ID=prot_H-paniculata_contig14761.2844.1|Name=mRNA_H-paniculata_contig14761.2844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=314bp MRAFREPSFGNKNYAMIFVDDYTRMIFNRFLRNKNDKAEAFKRFIADVATback to top mRNA from alignment at H-paniculata_contig14761:1219..3006- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14761.2844.1 ID=mRNA_H-paniculata_contig14761.2844.1|Name=mRNA_H-paniculata_contig14761.2844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1788bp|location=Sequence derived from alignment at H-paniculata_contig14761:1219..3006- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14761:1219..3006- >mRNA_H-paniculata_contig14761.2844.1 ID=mRNA_H-paniculata_contig14761.2844.1|Name=mRNA_H-paniculata_contig14761.2844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1884bp|location=Sequence derived from alignment at H-paniculata_contig14761:1219..3006- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |