mRNA_H-paniculata_contig1466.2785.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1466.2785.1
Unique NamemRNA_H-paniculata_contig1466.2785.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1466.2785.1 vs. uniprot
Match: A0A6H5JEL3_9PHAE (Pre-mRNA-processing factor 19 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEL3_9PHAE)

HSP 1 Score: 636 bits (1641), Expect = 4.250e-221
Identity = 377/509 (74.07%), Postives = 417/509 (81.93%), Query Frame = 3
Query:  162 MQCAISGQTPETPVVSKKSGHLYEKRLITKYIDAEGKCPATGEELTVDDLLELRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARSQMQSXXXXXXXXXXXXXXXXXPVEEMQMEDDGGEEGISEAVHKQMAVKCKELSKKRKKRAMPEDLATPEAISAWEVTANHTLHKTNPAGVTCLDLHPSRPNLVLTGGVDKTAIVFDSVTQAQVATLSAHTKRVTDVCFHPTKELLVTTSVDKTARVWQHQQDKDGGAGGYKVAHVLDDHEGEVVGATIHATGDFLATASKDKSWAFYDINRGRLLKQTGNPDYPGGFRCVRFHPDGLILATGTTDSFVRIWDMKQSHNVANFEHEDGGAVNALAXXXXXXXXXXXXXXXXXXXXXXXXLNNFQKLAIGAAPGAASSVAFDYSGSYLAVGGKDCAKVFAVKTWDELASHDDYKGSVTGVKFGASANFLATSSMDRTVRVYGSA 1688
            MQCAISGQTPETPVVSKKSGH+YEKRLI KYIDAEGKCPATGEELT DDLL++RS+ AVKPRP EAASIPGLL+ +QNEWDDLMLET+TLKQHL+QTRQELSQ+LYQNDAACRVIARL RERDEA +Q+Q+XXXXXXXXXXXXXXXXX VEEMQ EDDG EEGIS +VH QM  K KELSKKRKKRAMP+DLA+ E +SAW   + +TLHKT+P G+TCLDLHPS+PNLVLTGGVDKTAIVFD  TQAQVATLS HTKR+TD CFHPT+ELL+T+S DKTARVWQ Q + DGG  GYK  HVLDDH+GEVVGAT+HATGDF+ATASKDKSWAFYDINRGRLLK   N +Y  G+ CVRFHPDGLIL TGT D+ VRIWDMKQ+ NVANF+  +GG      XXXXXXXXXXXXXXXXXXXXXXXX                               GK   KVFAVKTW ELA++ DY GSVTGVKFG SA+FLATSSMDRT+R YG+A
Sbjct:    1 MQCAISGQTPETPVVSKKSGHIYEKRLIVKYIDAEGKCPATGEELTADDLLDVRSEGAVKPRPAEAASIPGLLSFLQNEWDDLMLETYTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERDEALAQVQAXXXXXXXXXXXXXXXXXXVEEMQTEDDG-EEGISPSVHAQMQAKWKELSKKRKKRAMPDDLASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSADKTARVWQAQAEGDGG--GYKAVHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GKKRTKVFAVKTWGELATYGDYGGSVTGVKFGKSASFLATSSMDRTLRFYGTA 503          
BLAST of mRNA_H-paniculata_contig1466.2785.1 vs. uniprot
Match: A0A6V1T7M8_HETAK (Pre-mRNA-processing factor 19 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T7M8_HETAK)

HSP 1 Score: 477 bits (1227), Expect = 1.660e-158
Identity = 278/516 (53.88%), Postives = 364/516 (70.54%), Query Frame = 3
Query:  162 MQCAISGQTPETPVVSKKSGHLYEKRLITKYIDAEGKCPATGEELTVDDLLELRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARSQMQSXXXXXXXXXXXXXXXXXP-VEEMQMEDDGGEEGISEAVHKQMAVKCKELSKKRKKRAMPEDLATPEAISAWEVTANHTLHKTNPAGVTCLDLHPSRPNLVLTGGVDKTAIVFDSVTQAQVATLSAHTKRVTDVCFHP--TKELLVTTSVDKTARVWQHQQDKDGGAGGYKVAHVLDDHEGEVVGATIHATGDFLATASKDKSWAFYDINRG---RLLKQTGNPDYPGGFRCVRFHPDGLILATGTTDSFVRIWDMKQSHNVANFEHEDGGAVNALAXXXXXXXXXXXXXXXXXXXXXXXXLNNFQKLAIGAAPGAA-SSVAFDYSGSYLAVGGKDCAKVFAVKTWDELASHDDYKGSVTGVKFGASANFLATSSMDRTVRVYGSA 1688
            M C+ISG+ P+ PV+S KSGHL+EK LI KY+ +E  CP TG+EL+++DL +++ +KAVKPRP+ A SIPGLL + QNEWDDLMLETHTLK HLD TRQ+LSQALYQ+DAACRVIARL+RERDE ++Q+                        ++++++  EEGIS+AV  +M  K K+LSK+RKKR +P+ LA+ E +S W   A+HT+HK++  G+ CLDLHP+  ++VLTGG+DK A++F+  ++  VA LS H K+VT   FHP   + LL TTS DKTA++W    D       Y+    L DH  EVVGA++HATGDFLATASKD++WAFYD+ +G     LK   +P   GGF CV FHPDGLIL TGT+D+ +RIWDMK   NVA+FE   G AV+A  XXXXXXXXXXXXXXXXXXXXXXX L NF  L  G   G    +VAFD +G+YLA GG D  +++AVK W+ELA+   ++  VTGV+FG  A FLA++SMDR+++++  A
Sbjct:    1 MHCSISGEVPKVPVISVKSGHLFEKHLIEKYLKSESTCPVTGDELSIEDLKDVKVNKAVKPRPLTATSIPGLLNLFQNEWDDLMLETHTLKSHLDSTRQQLSQALYQHDAACRVIARLIRERDELKTQLTMYKQQIAEAAAATPQIEVTSAPSLEVQEEKQEEGISDAVLSKMTRKWKQLSKERKKRGIPDSLASAETLSKWAAKASHTVHKSDKPGILCLDLHPTDQDMVLTGGMDKEAVLFNKTSEQVVAKLSGHGKKVTTCSFHPHADRNLLFTTSADKTAKIWGSSGDA------YECRMTLADHTAEVVGASVHATGDFLATASKDRTWAFYDVAQGGAATCLKIVQDPTVAGGFECVSFHPDGLILGTGTSDALIRIWDMKTQTNVASFEGHTG-AVHAXXXXXXXXXXXXXXXXXXXXXXXXXRLKNFHNLDAGGTGGVGVRTVAFDRAGAYLACGGADI-RLYAVKEWNELAALGAHEKPVTGVRFGPDAGFLASTSMDRSLKIFTEA 508          
BLAST of mRNA_H-paniculata_contig1466.2785.1 vs. uniprot
Match: A0A835YI40_9STRA (Pre-mRNA-processing factor 19 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI40_9STRA)

HSP 1 Score: 440 bits (1132), Expect = 2.630e-144
Identity = 264/513 (51.46%), Postives = 338/513 (65.89%), Query Frame = 3
Query:  162 MQCAISGQTPETPVVSKKSGHLYEKRLITKYIDAEGKCPATGEELTVDDLLELRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARSQMQSXXXXXXXXXXXXXXXXXP----VEEMQMEDDGGEEGISEAVHKQMAVKCKELSKKRKKRAMPEDLATPEAISAWEVTANHTLHKTNPAGVTCLDLHPSRPNLVLTGGVDKTAIVFDSVTQAQVATLSAHTKRVTDVCFHPTKELLVTTSVDKTARVWQHQQDKDGGAGGYKVAHVLDDHEGEVVGATIHATGDFLATASKDKSWAFYDINRGRLLKQTGNPDYPGGFRCVRFHPDGLILATGTTDSFVRIWDMKQSHNVANFEHEDGGAVNALAXXXXXXXXXXXXXXXXXXXXXXXXLNNFQKLAIGAAPGAASSVAFDYSGSYLAVGGKDCAKVFAVKTWDELASHDDYKGSVTGVKFGASANFLATSSMDRTVRVYGSA 1688
            M CAISG+ PE PVVS+K+GHL+E+RLI KYIDAEGKCP TGE L VDDL++++S+K V+PRP  A SIPGLLA+MQNEWDDLM+ET+TLKQHLD TRQELSQALYQ DA+ RVIARL+RERDEAR Q+Q+        XXXXXXXXX     VE   +ED   +  I++ V  ++    K L+K RKKR +P DL + + ++ W   ++ TLHKT PAG+TCL L P   +L LTGGVDKTAI+F+  +  Q A LS H+K+V DV F    E+L+T S D TA+ W    D +G      + H    H+GEV     H TG + ATA +DK+W F+++  G  L+      +  G+ C R+HPDGLIL TGT D+ VRIWDMK  +NVA+F+  +GG V ++A         XXXXXXXXXXXXX  L NF  L +G+A G    V FD+SG+YLAV      +V  VK W    +   +K  +TGV F  SA  LA +SMDRT+R + +A
Sbjct:    1 MNCAISGEVPEVPVVSRKTGHLFERRLIEKYIDAEGKCPITGEPLGVDDLMDVKSNKVVRPRPATATSIPGLLALMQNEWDDLMVETYTLKQHLDTTRQELSQALYQQDASARVIARLMRERDEARQQLQAQRAALAQAXXXXXXXXXXXXMEVEPAVVEDIPAK--IADTVMSELTNTWKALTKSRKKRVIPVDLVSADDMANWVEASSQTLHKTTPAGITCLALSPQDASLTLTGGVDKTAILFNRESGVQSALLSGHSKKVLDVAFGKGGEVLLTASADGTAKSW----DLEG-----MLLHTFQGHKGEVTAICGHPTGRYAATAGRDKAWGFHELESGSCLRLVKEEGFEAGYECARWHPDGLILGTGTGDAQVRIWDMKTQNNVASFKGHEGGVVGSIAFSENGYYMAXXXXXXXXXXXXXRKLKNFHTLTLGSAAGTPVVVTFDHSGTYLAVSANTTIQVHVVKEWALATTLGQFKKPITGVAFAPSAKSLAATSMDRTLRFFEAA 502          
BLAST of mRNA_H-paniculata_contig1466.2785.1 vs. uniprot
Match: A0A833V7Z2_9POAL (Pre-mRNA-processing factor 19 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833V7Z2_9POAL)

HSP 1 Score: 390 bits (1002), Expect = 1.280e-124
Identity = 223/515 (43.30%), Postives = 305/515 (59.22%), Query Frame = 3
Query:  162 MQCAISGQTPETPVVSKKSGHLYEKRLITKYIDAEGKCPATGEELTVDDLLELRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARSQMQSXXXXXXXXXXXXXXXXXPVEEMQMEDDGGE--EGISEAVHKQMAVKCKELSKKRKKRAMPEDLATPEAISAWEVTANHTLHKTNPAGVTCLDLHPSRPNLVLTGGVDKTAIVFDSVTQAQVATLSAHTKRVTDVCFHPTKELLVTTSVDKTARVWQHQQDKDGGAGGYKVAHVLDDHEGEVVGATIHATGDFLATASKDKSWAFYDINRGRLLKQTGNPDYPGGFRCVRFHPDGLILATGTTDSFVRIWDMKQSHNVANFEHEDGGAVNALAXXXXXXXXXXXXXXXXXXXXXXXXLNNFQKLAIGAAPGAASSVAFDYSGSYLAVGGKDCAKVFAVKT----WDELASHDDYKGS--VTGVKFGASANFLATSSMDRTVRVYG 1682
            M CAISG+ PE PVVSKKSGHL+E+RLI +YI   G+CP T EEL++DD+L ++++K VKPRP++AASIPGLL + QNEWD LML   +L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR  +                    V E ++  DG     GI  A   ++A   K LS +RK+R +P  LA  +A+ ++   ++H LHKTN  G+  +D+HPS+ +++ TGGVD  A++F+  +   ++TL+ H+K++T V F    EL++T S DKT R+WQ   D     G Y  AH+L DH  EV   T+ AT  +  +A  D +W FYD+  G  LKQ G P   GG+    FHPDGLIL TGT++S V+IWD+K    V NFE   G  V A++                        L NF+  +        +SV FD+SGSYLA+ G D  +V+ V      W+ + +  D  G+  VT VKFGA A ++A  SMDR +R++G
Sbjct:    1 MICAISGEVPEDPVVSKKSGHLFERRLIERYIQDHGRCPVTKEELSMDDILPVKTNKTVKPRPLQAASIPGLLGMFQNEWDALMLSNLSLEQQLHTARQELSHALYQHDAACRVIARLKKERDEARLLLSQAERQLPAATAPALSNGKRVAEDEVGPDGKRIRPGIDSATVDELAEYNKMLSAQRKQREIPATLAPIDALESYTQISSHPLHKTNKPGILSIDIHPSK-DIIATGGVDTNAVIFNRASGQILSTLTGHSKKITSVKFVGRDELVITGSADKTVRLWQGTDD-----GTYNCAHILKDHTAEVQAVTVQATKKYFVSAGMDNTWCFYDLPTGSCLKQVGEPSQEGGYTTAAFHPDGLILGTGTSESLVKIWDIKTQAFVTNFEGHSG-PVTAMSFSENGYFLATAASDGVRLWDLRK-LRNFRTFSPYDVNTPTNSVEFDFSGSYLAIAGSDI-RVYQVANVKLEWNLIKTFPDLSGTGKVTSVKFGADAKYMAVGSMDRNLRIFG 506          
BLAST of mRNA_H-paniculata_contig1466.2785.1 vs. uniprot
Match: A0A2R6W4B2_MARPO (Pre-mRNA-processing factor 19 n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W4B2_MARPO)

HSP 1 Score: 390 bits (1002), Expect = 1.500e-124
Identity = 231/521 (44.34%), Postives = 302/521 (57.97%), Query Frame = 3
Query:  162 MQCAISGQTPETPVVSKKSGHLYEKRLITKYIDAEGKCPATGEELTVDDLLELRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARSQMQSXXXXXXXXXXXXXXXXX------PVEEMQMEDDG--GEEGISEAVHKQMAVKCKELSKKRKKRAMPEDLATPEAISAWEVTANHTLHKTNPAGVTCLDLHPSRPNLVLTGGVDKTAIVFDSVTQAQVATLSAHTKRVTDVCFHPTKELLVTTSVDKTARVWQHQQDKDGGAGGYKVAHVLDDHEGEVVGATIHATGDFLATASKDKSWAFYDINRGRLLKQTGNPDYPGGFRCVRFHPDGLILATGTTDSFVRIWDMKQSHNVANFEHEDGGAVNALAXXXXXXXXXXXXXXXXXXXXXXXXLNNFQKLAIGAAPGAASSVAFDYSGSYLAVGGKDCA--KVFAVKT-WDELASHDDYKGS--VTGVKFGASANFLATSSMDRTVRVYGS 1685
            M CAISG TPE PVVS+++G LYE+RLI K++   G CP TGE L  DDL+ ++++KAVKPRP++AASIPG+L + QNEWD LML  + L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR ++                         P  E +    G    +GI+  + K++      LS +RKKR   + LAT EA   +   A+H LHKT   G+   D+HP++ + +LTGGVD TAIVF+  +   V+TL+ H+KRVT V F P  EL++T S DKT R+WQ Q+D     G Y   HVL DH  EV   T+HAT ++  TAS DK+W FYD++ G  L Q        GF    FHPDGLIL TGT +S VRIWD+K   NVA FE   G   +                           L NF+  A   A    ++V FDYSGSYLAVGG D    +V +VK  W+ +    D  G+  VT V+FG  A++LA ++MDR +R+ G+
Sbjct:    1 MFCAISGVTPEEPVVSRRTGLLYERRLIEKHLAENGTCPVTGESLPADDLISVKTNKAVKPRPLQAASIPGMLGLFQNEWDALMLSNYALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARQRLVQAARQVPSTELATPTAASANGKRAPEAEAEPAAPGKKARQGITPEIIKELTDCNARLSGQRKKRQNSQTLATAEAFEKYTQVASHPLHKTVKPGICSTDIHPTK-DFILTGGVDSTAIVFNKASGEIVSTLAGHSKRVTSVKFVPRDELVLTGSADKTVRIWQGQED-----GSYNCKHVLKDHSAEVRAVTLHATHNYFVTASLDKTWGFYDLSTGLCLTQVNEATVQDGFTSAAFHPDGLILGTGTAESLVRIWDVKTQANVAKFEGHTGPVTDI--SFSENGYFLATAASDGVKLWDLRKLKNFRSFAPYDAATPTNTVEFDYSGSYLAVGGSDIRIYQVASVKQEWNTVKVFPDLSGTGKVTSVRFGPDASYLAVATMDRQLRILGA 513          
BLAST of mRNA_H-paniculata_contig1466.2785.1 vs. uniprot
Match: A0A4Y7L8Z3_PAPSO (Pre-mRNA-processing factor 19 n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7L8Z3_PAPSO)

HSP 1 Score: 386 bits (992), Expect = 3.980e-123
Identity = 227/520 (43.65%), Postives = 307/520 (59.04%), Query Frame = 3
Query:  162 MQCAISGQTPETPVVSKKSGHLYEKRLITKYIDAEGKCPATGEELTVDDLLELRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARSQMQ------SXXXXXXXXXXXXXXXXXPVEEMQMEDDGGEE--GISEAVHKQMAVKCKELSKKRKKRAMPEDLATPEAISAWEVTANHTLHKTNPAGVTCLDLHPSRPNLVLTGGVDKTAIVFDSVTQAQVATLSAHTKRVTDVCFHPTKELLVTTSVDKTARVWQHQQDKDGGAGGYKVAHVLDDHEGEVVGATIHATGDFLATASKDKSWAFYDINRGRLLKQTGNPDYPGGFRCVRFHPDGLILATGTTDSFVRIWDMKQSHNVANFEHEDGGAVNALAXXXXXXXXXXXXXXXXXXXXXXXXLNNFQKLAIGAAPGAASSVAFDYSGSYLAVGGKDCA--KVFAVKT-WDELASHDDYKGS--VTGVKFGASANFLATSSMDRTVRVYG 1682
            M CAISG+ PE PVVSKK+GHL+EKRL+ ++++  GKCP TGE LT+DDL+ ++++KAVKPRP++AASIPGLL + Q EWD LML    L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR+ +                           E++ M+ DG     GIS  +   +      LS++RKKR +P  LA  +A+  +   ++H LHKTN  G+  +D+HPS+ +++ TGGVD  AIVFD  +   ++TLS H+K+VT V F P  +  VT S DKT RVWQ  +D     G Y   HVL DH  EV   T+HAT ++  +AS D +W FYD+  G  L Q G+     G+    FHPDGLIL TGT+ + VRIWD+K   NVA FE   G  V+A++                        L NF+  A   +  + +SV FD+SGSYLA+ G D    +V  VK+ W+ + +  D  G+   T VKFG +A +L   SMDR +R++G
Sbjct:    1 MICAISGEVPEEPVVSKKTGHLFEKRLVERHVEDFGKCPVTGEPLTMDDLMPVKTNKAVKPRPLQAASIPGLLGMFQIEWDQLMLSHFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARTLLTLAERHVPLPASTTANDSTFNNGKRAAEDVNMDHDGKRSLPGISADIIADLTDCNTLLSQQRKKRQIPSTLAPVDALERYTQLSSHPLHKTNRPGILSVDIHPSK-DIIATGGVDTNAIVFDRTSGQILSTLSGHSKKVTSVKFVPKDDFFVTASADKTVRVWQGSED-----GNYNCRHVLKDHIAEVQAVTVHATNNYFVSASLDSTWCFYDLTSGSCLTQVGDTSDGDGYTSAAFHPDGLILGTGTSQANVRIWDVKSQSNVAKFEGHSG-PVSAISFSENGYFLATAADDGVKLWDLRK-LRNFRTFAPYDSNTSTNSVDFDHSGSYLAIAGSDIRVYQVANVKSEWNCVKTFPDLSGTGKATSVKFGPNAQYLTVGSMDRNLRIFG 512          
BLAST of mRNA_H-paniculata_contig1466.2785.1 vs. uniprot
Match: A0A6A7GC01_9CRUS (Pre-mRNA-processing factor 19 (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GC01_9CRUS)

HSP 1 Score: 385 bits (990), Expect = 5.430e-123
Identity = 239/514 (46.50%), Postives = 322/514 (62.65%), Query Frame = 3
Query:  162 MQCAISGQTPETPVVSKKSGHLYEKRLITKYIDAEGKCPATGEELTVDDLLELRS-DKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARSQMQSXXXXXXXXXXXXXXXXXPVEEMQMEDDGGEEGISEAVHKQMAVKCKELSKKRKKR---AMPEDLATPEAISAWEVTANHTLHKTNPAGVTCLDLHPSRPNLVLTGGVDKTAIVFDSVTQAQVATLSAHTKRVTDVCFHPTKELLVTTSVDKTARVWQHQQDKDGGAGGYKVAHVLDDHEGEVVGATIHATGDFLATASKDKSWAFYDINRGRLLKQTGNPDYPGGFRCVRFHPDGLILATGTTDSFVRIWDMKQSHNVANFEHEDGGAVNALAXXXXXXXXXXXXXXXXXXXXXXXXLNNFQKL--AIGAAPGAASSVAFDYSGSYLAVGGKDCAKVFAVKTWDELASHDDYKGSVTGVKFGASANFLATSSMDRTVRVYGS 1685
            M CA+SG+  E PVVS+KSGH++E+RLI K+I   GKCP T E++ ++DL+ ++   + V+PRP  A S+  LL + QNEWD +MLET+TLKQ LD  RQELS ALYQ+DAA RVIARL++ERDEAR  +                     + M+++    E GI+  +  +M +  K+LSK RKKR   A P +L + E I  ++   +H LH  +  G+ CLDLHP   N V+TGGVD T I+F+  T+    TL  H K+++ V FHPT++++++ S D T  VW    DK      + V      H   V   ++HATGD+  T+S D +WAF+DI  G   ++  +P+   GF  ++FHPDGLI  TG  DS VRIWD+K   NVANFE  DG       XXXXXXXXXXXXXXXXXXXXXXX LNNF+ +       P    ++ FDYSG+YLAVGG   + V+  KTWD++   DD++  VTGV+FGA A F+ +SS+DRTV+ YGS
Sbjct:    8 MNCALSGELCEDPVVSQKSGHIFERRLIEKHIKETGKCPITNEDIVIEDLIPIKDVAQPVRPRPASATSLASLLKLFQNEWDSIMLETYTLKQSLDTARQELSHALYQHDAASRVIARLIKERDEARQALADTAANMQKALAGAG------DAMEIDTKETESGINAIIINEMQLHAKKLSKARKKRTKVAHP-NLPSVETIGTYDCVTSHPLHLASEPGILCLDLHPVDQNRVVTGGVDSTVIIFNRQTKKIEQTLKQHKKKISSVVFHPTQDVILSASYDNTTLVWASDGDK------FSVVRTSTAHTAAVTCVSLHATGDYFVTSSLDATWAFHDIETGVCRQKISSPEIDAGFTRIQFHPDGLIAGTGGMDSVVRIWDVKNQTNVANFEGHDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LNNFRTINPEDSEKPSPVQALQFDYSGTYLAVGGSGVS-VYNTKTWDQVKFFDDHRKDVTGVRFGADAKFIVSSSLDRTVKFYGS 506          
BLAST of mRNA_H-paniculata_contig1466.2785.1 vs. uniprot
Match: B6TRQ7_MAIZE (Pre-mRNA-processing factor 19 n=13 Tax=Panicoideae TaxID=147369 RepID=B6TRQ7_MAIZE)

HSP 1 Score: 385 bits (988), Expect = 1.890e-122
Identity = 226/519 (43.55%), Postives = 308/519 (59.34%), Query Frame = 3
Query:  162 MQCAISGQTPETPVVSKKSGHLYEKRLITKYIDAEGKCPATGEELTVDDLLELRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARSQM-QSXXXXXXXXXXXXXXXXXPVEEMQMEDDGGEEG--ISEAVHKQMAVKCKE----LSKKRKKRAMPEDLATPEAISAWEVTANHTLHKTNPAGVTCLDLHPSRPNLVLTGGVDKTAIVFDSVTQAQVATLSAHTKRVTDVCFHPTKELLVTTSVDKTARVWQHQQDKDGGAGGYKVAHVLDDHEGEVVGATIHATGDFLATASKDKSWAFYDINRGRLLKQTGNPDYPGGFRCVRFHPDGLILATGTTDSFVRIWDMKQSHNVANFEHEDGGAVNALAXXXXXXXXXXXXXXXXXXXXXXXXLNNFQKLAIGAAPGAASSVAFDYSGSYLAVGGKDCA--KVFAVKT-WDELASHDDYKGS--VTGVKFGASANFLATSSMDRTVRVYG 1682
            M CAISG+ P+ PVVSKKSG L+E+RLI +YI+  GKCP T +ELT+DD++ + ++K VKPRP++AASIPGLL I QNEWD LML    L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR+ + Q+                    +  MED+ G +G  I   ++  M  +  E    LS +RKKR +P  LA  +A+  +   ++H LHKTN  G+  +D+HPS+ ++V TGG+D  A++FD  +   + TL+ H+K++T + F P  +L VT S DKT R+WQ  ++     G Y   H L DH  EV   T+HAT  +  +ASKD SW FYDI+ G  L Q G      G+    FHPDGLIL TGTTD+ V+IWD+K   NVA FE   G  V A++                        L NF+  +   +    ++V FD+SG+YLA+GG D    +V  VK  W+ + +  D  G+  VT VKFGA A ++A  SMDR +R++G
Sbjct:    1 MICAISGEVPDEPVVSKKSGLLFERRLIERYIEDHGKCPITKDELTMDDIVPVNTNKVVKPRPLQAASIPGLLGIFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLAQAERQIPASVAGAAPAAVVSNGKRAMEDEIGPDGKKIRPGINPVMIDELTECNTMLSAQRKKRQVPPTLAPLDALERYTQISSHPLHKTNKPGILSMDVHPSK-DVVATGGIDTNAVIFDRSSGQILCTLTGHSKKITTLKFVPRDQLFVTGSADKTVRIWQENEN-----GNYNCVHTLKDHTAEVEAVTVHATQKYFVSASKDNSWCFYDISTGSCLTQVGEASGQEGYTSASFHPDGLILGTGTTDAVVKIWDVKTQSNVAKFEGHVG-PVTAMSFSENGYFLATAAHDGVKLWDLRK-LRNFRTFSPYDSDTPTNTVEFDFSGNYLAIGGSDIRVYQVANVKAEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFG 511          
BLAST of mRNA_H-paniculata_contig1466.2785.1 vs. uniprot
Match: D5A9Q1_PICSI (Pre-mRNA-processing factor 19 n=2 Tax=Picea sitchensis TaxID=3332 RepID=D5A9Q1_PICSI)

HSP 1 Score: 382 bits (980), Expect = 2.690e-121
Identity = 224/524 (42.75%), Postives = 300/524 (57.25%), Query Frame = 3
Query:  162 MQCAISGQTPETPVVSKKSGHLYEKRLITKYIDAEGKCPATGEELTVDDLLELRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARSQM-QSXXXXXXXXXXXXXXXXXPVEEMQMEDDGGEE----------GISEAVHKQMAVKCKELSKKRKKRAMPEDLATPEAISAWEVTANHTLHKTNPAGVTCLDLHPSRPNLVLTGGVDKTAIVFDSVTQAQVATLSAHTKRVTDVCFHPTKELLVTTSVDKTARVWQHQQDKDGGAGGYKVAHVLDDHEGEVVGATIHATGDFLATASKDKSWAFYDINRGRLLKQTGNPDYPGGFRCVRFHPDGLILATGTTDSFVRIWDMKQSHNVANFEHEDGGAVNALAXXXXXXXXXXXXXXXXXXXXXXXXLNNFQKLAIGAAPGAASSVAFDYSGSYLAVGGKDCA--KVFAVKT-WDELASHDDYKGS--VTGVKFGASANFLATSSMDRTVRVYGS 1685
            M CAISG TPE PVVSK+SG L+EKRL+ K+I   G CP TGE L+ DDL+ +++ KAVKPRP++AASIPG+L + QNEWD +ML  + L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR+ + Q+                  V   + + +  +E          GI+  + K++      LS +RKKR +   LA  EA+  +   ++H LHKTN  G+ C D+HPS+  L+ TGG D  A+VFD      ++TLS HTKRVT V F    +LL+T S DKT R+WQ  +D     G Y   HVL DH  EV   T+HAT ++  TAS DK+W FYD++ G  L Q  +P    G+    FHPDGLIL TGTT+S VRIWD+K   NVA F+   G   +                           L NF+      +    +SV FD+SGSYLA+ G D    +V +VK  W+ + +  D  G+   + V+FG  A +LA  + DR +R++GS
Sbjct:    1 MFCAISGSTPEEPVVSKRSGLLFEKRLVEKHIAEYGTCPVTGESLSTDDLVPVKTPKAVKPRPLQAASIPGMLGLFQNEWDAVMLSNYALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLAQADRQIPMLPSNLAAVNASAVSNGKRDLERDDELPPPSKRIRQGITPEIIKELTDCNAMLSSQRKKRQISSTLAPVEALERYTQLSSHPLHKTNKPGILCADIHPSK-GLISTGGADANAVVFDRSAGQIISTLSGHTKRVTSVKFVARDDLLLTGSADKTVRIWQANED-----GAYNCRHVLKDHTAEVHAVTVHATNNYFVTASMDKTWCFYDLSSGLCLTQVNDPGIEDGYTSAAFHPDGLILGTGTTESLVRIWDVKTQANVAKFDGHSGAVTDI--SFSENGYFLATAGYDGVKLWDLRKLKNFRTFTPYDSNTPTNSVQFDHSGSYLAIAGSDIRVYQVASVKQEWNSIKTFPDLSGTGKASCVRFGPDATYLAVGTGDRNLRIFGS 516          
BLAST of mRNA_H-paniculata_contig1466.2785.1 vs. uniprot
Match: A0A1B6QKE9_SORBI (Pre-mRNA-processing factor 19 n=7 Tax=Poaceae TaxID=4479 RepID=A0A1B6QKE9_SORBI)

HSP 1 Score: 382 bits (980), Expect = 2.950e-121
Identity = 222/519 (42.77%), Postives = 308/519 (59.34%), Query Frame = 3
Query:  162 MQCAISGQTPETPVVSKKSGHLYEKRLITKYIDAEGKCPATGEELTVDDLLELRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARSQMQ-SXXXXXXXXXXXXXXXXXPVEEMQMEDDGGEEG--ISEAVHKQMAVKCKE----LSKKRKKRAMPEDLATPEAISAWEVTANHTLHKTNPAGVTCLDLHPSRPNLVLTGGVDKTAIVFDSVTQAQVATLSAHTKRVTDVCFHPTKELLVTTSVDKTARVWQHQQDKDGGAGGYKVAHVLDDHEGEVVGATIHATGDFLATASKDKSWAFYDINRGRLLKQTGNPDYPGGFRCVRFHPDGLILATGTTDSFVRIWDMKQSHNVANFEHEDGGAVNALAXXXXXXXXXXXXXXXXXXXXXXXXLNNFQKLAIGAAPGAASSVAFDYSGSYLAVGGKDCA--KVFAVKT-WDELASHDDYKGS--VTGVKFGASANFLATSSMDRTVRVYG 1682
            M CAISG+ P+ PVVSKKSG L+E+RLI +Y++  GKCP T E+LT+DD++ ++++K VKPRP++AASIPGLL I QNEWD LML    L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR+ +  +                    +  MED+ G +G  I   ++  M  +  E    LS +RKKR +P  LA  +A+  +   ++H LHKTN  G+  +D+HPS+ ++V TGG+D  A++FD  +   + TL+ H+K++T + F P  +L VT S DKT R+WQ  ++     G Y   H L DH  EV   T+HAT  +  +ASKD SW FYD++ G  L Q G      G+    FHPDGLIL TGTTD+  +IWD+K   NVA FE   G  V A++                        L NF+  +   +    ++V FD+SG+YLA+GG D    +V  VK+ W+ + +  D  G+  VT VKFGA A ++A  SMDR +R++G
Sbjct:    1 MICAISGEVPDEPVVSKKSGLLFERRLIERYVEDHGKCPVTKEDLTMDDIVPVKTNKVVKPRPLQAASIPGLLGIFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLALAERQIPASVPGAAPVAVVSNGKRAMEDEIGPDGKKIRPGINPVMIDELTECNTMLSAQRKKRQVPPTLAPIDALERYTQISSHPLHKTNKPGILSMDIHPSK-DIVATGGIDTNAVLFDRASGQILCTLTGHSKKITTLKFVPRDQLFVTGSADKTVRIWQENEN-----GSYNCVHTLKDHTAEVEAVTVHATQKYFVSASKDNSWCFYDMSTGSCLTQVGEASGQEGYTSAAFHPDGLILGTGTTDAVAKIWDVKTQSNVAKFEGHVG-PVTAMSFSENGYFLATAAHDGVKLWDLRK-LRNFRTFSPYDSDTPTNTVEFDFSGNYLAIGGSDIRVYQVANVKSEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFG 511          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1466.2785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEL3_9PHAE4.250e-22174.07Pre-mRNA-processing factor 19 n=2 Tax=Ectocarpus T... [more]
A0A6V1T7M8_HETAK1.660e-15853.88Pre-mRNA-processing factor 19 n=1 Tax=Heterosigma ... [more]
A0A835YI40_9STRA2.630e-14451.46Pre-mRNA-processing factor 19 n=1 Tax=Tribonema mi... [more]
A0A833V7Z2_9POAL1.280e-12443.30Pre-mRNA-processing factor 19 n=1 Tax=Carex little... [more]
A0A2R6W4B2_MARPO1.500e-12444.34Pre-mRNA-processing factor 19 n=1 Tax=Marchantia p... [more]
A0A4Y7L8Z3_PAPSO3.980e-12343.65Pre-mRNA-processing factor 19 n=2 Tax=Papaver somn... [more]
A0A6A7GC01_9CRUS5.430e-12346.50Pre-mRNA-processing factor 19 (Fragment) n=2 Tax=H... [more]
B6TRQ7_MAIZE1.890e-12243.55Pre-mRNA-processing factor 19 n=13 Tax=Panicoideae... [more]
D5A9Q1_PICSI2.690e-12142.75Pre-mRNA-processing factor 19 n=2 Tax=Picea sitche... [more]
A0A1B6QKE9_SORBI2.950e-12142.77Pre-mRNA-processing factor 19 n=7 Tax=Poaceae TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1466contigH-paniculata_contig1466:12109..26093 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score637.1
Seed ortholog evalue7e-180
Seed eggNOG ortholog2880.D7G8G6
Preferred namePRPF19
KEGG koko:K10599,ko:K14808,ko:K20368
KEGG TC8.A.61
KEGG Pathwayko03040,ko04120,map03040,map04120
KEGG ModuleM00353,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000077,GO:0000151,GO:0000209,GO:0000244,GO:0000245,GO:0000349,GO:0000375,GO:0000377,GO:0000381,GO:0000387,GO:0000393,GO:0000398,GO:0000726,GO:0000974,GO:0001701,GO:0001824,GO:0001832,GO:0001833,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005694,GO:0005730,GO:0005737,GO:0005811,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006302,GO:0006303,GO:0006325,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006629,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008283,GO:0008380,GO:0008610,GO:0009056,GO:0009057,GO:0009058,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009792,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010498,GO:0010604,GO:0010628,GO:0010720,GO:0010721,GO:0014013,GO:0014015,GO:0016043,GO:0016070,GO:0016071,GO:0016567,GO:0016604,GO:0016607,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0023052,GO:0030154,GO:0030163,GO:0030312,GO:0031323,GO:0031325,GO:0031461,GO:0031570,GO:0031974,GO:0031981,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033120,GO:0033554,GO:0034450,GO:0034613,GO:0034622,GO:0034641,GO:0035556,GO:0035861,GO:0036211,GO:0040007,GO:0042221,GO:0042742,GO:0042770,GO:0042802,GO:0043009,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043484,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045685,GO:0045687,GO:0045786,GO:0045935,GO:0046483,GO:0046686,GO:0048024,GO:0048026,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048699,GO:0048710,GO:0048711,GO:0048731,GO:0048856,GO:0048869,GO:0050684,GO:0050685,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051171,GO:0051173,GO:0051179,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051254,GO:0051276,GO:0051603,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051960,GO:0051961,GO:0051962,GO:0060255,GO:0060284,GO:0061630,GO:0061659,GO:0065003,GO:0065007,GO:0070013,GO:0070534,GO:0070647,GO:0070727,GO:0071006,GO:0071007,GO:0071012,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0072395,GO:0072401,GO:0072422,GO:0080008,GO:0080090,GO:0090304,GO:0090734,GO:0098542,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902494,GO:1903311,GO:1903313,GO:1990234,GO:1990904,GO:2000026
EggNOG free text desc.generation of catalytic spliceosome for first transesterification step
EggNOG OGsKOG0289@1,KOG0289@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-14_002950.1
EC2.3.2.27,3.6.4.13
COG Functional cat.DK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03009,ko03041,ko03400,ko04121,ko04131
Exons13
Model size2157
Cds size1530
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929166.3164382-UTR-H-paniculata_contig1466:12108..121711622929166.3164382-UTR-H-paniculata_contig1466:12108..12171Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1466 12109..12171 +
1691480757.2027073-UTR-H-paniculata_contig1466:12108..121711691480757.2027073-UTR-H-paniculata_contig1466:12108..12171Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1466 12109..12171 +
1622929166.3274536-UTR-H-paniculata_contig1466:13545..136431622929166.3274536-UTR-H-paniculata_contig1466:13545..13643Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1466 13546..13643 +
1691480757.2157347-UTR-H-paniculata_contig1466:13545..136431691480757.2157347-UTR-H-paniculata_contig1466:13545..13643Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1466 13546..13643 +
1622929166.547436-UTR-H-paniculata_contig1466:25627..260931622929166.547436-UTR-H-paniculata_contig1466:25627..26093Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1466 25628..26093 +
1691480757.330315-UTR-H-paniculata_contig1466:25627..260931691480757.330315-UTR-H-paniculata_contig1466:25627..26093Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1466 25628..26093 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929166.3382201-CDS-H-paniculata_contig1466:13643..136561622929166.3382201-CDS-H-paniculata_contig1466:13643..13656Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 13644..13656 +
1691480757.2233436-CDS-H-paniculata_contig1466:13643..136561691480757.2233436-CDS-H-paniculata_contig1466:13643..13656Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 13644..13656 +
1622929166.3530643-CDS-H-paniculata_contig1466:14884..149821622929166.3530643-CDS-H-paniculata_contig1466:14884..14982Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 14885..14982 +
1691480757.2318122-CDS-H-paniculata_contig1466:14884..149821691480757.2318122-CDS-H-paniculata_contig1466:14884..14982Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 14885..14982 +
1622929166.3638353-CDS-H-paniculata_contig1466:15619..157391622929166.3638353-CDS-H-paniculata_contig1466:15619..15739Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 15620..15739 +
1691480757.2408922-CDS-H-paniculata_contig1466:15619..157391691480757.2408922-CDS-H-paniculata_contig1466:15619..15739Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 15620..15739 +
1622929166.3767076-CDS-H-paniculata_contig1466:17142..172321622929166.3767076-CDS-H-paniculata_contig1466:17142..17232Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 17143..17232 +
1691480757.2500806-CDS-H-paniculata_contig1466:17142..172321691480757.2500806-CDS-H-paniculata_contig1466:17142..17232Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 17143..17232 +
1622929166.3880248-CDS-H-paniculata_contig1466:17998..181311622929166.3880248-CDS-H-paniculata_contig1466:17998..18131Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 17999..18131 +
1691480757.2662215-CDS-H-paniculata_contig1466:17998..181311691480757.2662215-CDS-H-paniculata_contig1466:17998..18131Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 17999..18131 +
1622929166.4008873-CDS-H-paniculata_contig1466:18482..185761622929166.4008873-CDS-H-paniculata_contig1466:18482..18576Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 18483..18576 +
1691480757.2742388-CDS-H-paniculata_contig1466:18482..185761691480757.2742388-CDS-H-paniculata_contig1466:18482..18576Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 18483..18576 +
1622929166.457209-CDS-H-paniculata_contig1466:19597..197361622929166.457209-CDS-H-paniculata_contig1466:19597..19736Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 19598..19736 +
1691480757.2820609-CDS-H-paniculata_contig1466:19597..197361691480757.2820609-CDS-H-paniculata_contig1466:19597..19736Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 19598..19736 +
1622929166.4679658-CDS-H-paniculata_contig1466:21623..219491622929166.4679658-CDS-H-paniculata_contig1466:21623..21949Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 21624..21949 +
1691480757.2897685-CDS-H-paniculata_contig1466:21623..219491691480757.2897685-CDS-H-paniculata_contig1466:21623..21949Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 21624..21949 +
1622929166.4820542-CDS-H-paniculata_contig1466:23029..231651622929166.4820542-CDS-H-paniculata_contig1466:23029..23165Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 23030..23165 +
1691480757.2978253-CDS-H-paniculata_contig1466:23029..231651691480757.2978253-CDS-H-paniculata_contig1466:23029..23165Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 23030..23165 +
1622929166.493977-CDS-H-paniculata_contig1466:23868..241051622929166.493977-CDS-H-paniculata_contig1466:23868..24105Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 23869..24105 +
1691480757.3059254-CDS-H-paniculata_contig1466:23868..241051691480757.3059254-CDS-H-paniculata_contig1466:23868..24105Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 23869..24105 +
1622929166.5128393-CDS-H-paniculata_contig1466:24418..245141622929166.5128393-CDS-H-paniculata_contig1466:24418..24514Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 24419..24514 +
1691480757.3140616-CDS-H-paniculata_contig1466:24418..245141691480757.3140616-CDS-H-paniculata_contig1466:24418..24514Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 24419..24514 +
1622929166.5319135-CDS-H-paniculata_contig1466:25579..256271622929166.5319135-CDS-H-paniculata_contig1466:25579..25627Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 25580..25627 +
1691480757.3221765-CDS-H-paniculata_contig1466:25579..256271691480757.3221765-CDS-H-paniculata_contig1466:25579..25627Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1466 25580..25627 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1466.2785.1prot_H-paniculata_contig1466.2785.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1466 13644..25627 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1466.2785.1

>prot_H-paniculata_contig1466.2785.1 ID=prot_H-paniculata_contig1466.2785.1|Name=mRNA_H-paniculata_contig1466.2785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=510bp
MQCAISGQTPETPVVSKKSGHLYEKRLITKYIDAEGKCPATGEELTVDDL
LELRSDKAVKPRPVEAASIPGLLAIMQNEWDDLMLETHTLKQHLDQTRQE
LSQALYQNDAACRVIARLVRERDEARSQMQSQRIALAQAQAAAPAAAAPV
EEMQMEDDGGEEGISEAVHKQMAVKCKELSKKRKKRAMPEDLATPEAISA
WEVTANHTLHKTNPAGVTCLDLHPSRPNLVLTGGVDKTAIVFDSVTQAQV
ATLSAHTKRVTDVCFHPTKELLVTTSVDKTARVWQHQQDKDGGAGGYKVA
HVLDDHEGEVVGATIHATGDFLATASKDKSWAFYDINRGRLLKQTGNPDY
PGGFRCVRFHPDGLILATGTTDSFVRIWDMKQSHNVANFEHEDGGAVNAL
AFSENGYYMASAGDDGYARLWDLRKLNNFQKLAIGAAPGAASSVAFDYSG
SYLAVGGKDCAKVFAVKTWDELASHDDYKGSVTGVKFGASANFLATSSMD
RTVRVYGSA*
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mRNA from alignment at H-paniculata_contig1466:12109..26093+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1466.2785.1 ID=mRNA_H-paniculata_contig1466.2785.1|Name=mRNA_H-paniculata_contig1466.2785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13985bp|location=Sequence derived from alignment at H-paniculata_contig1466:12109..26093+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGAGTTGATCACCCGAGGAGTCAAGGAGCGACACAGGACAAAAGGAGC ACAGACTGGAGAGGTGAGCACAATCCAGTCGCCGAAATAAAGGTCTTTAT GTGTCCTTGTGTAGAAGATGCTGTAGATCCTGTTTGAGAAAACGCAGGGT GAAAAAAATAGCTGAAAAGATGGACGTATTATGTTTGGCGGTTGTGGTGT CTTGTCCTTGTGACACAGACCAGTGCCGGAGGGTGTGTGAGAGGAGGTGG TGGGCCTGGGGGTATCAGGCGTCCTAAGCAGTATCCTGATAATGTTGTTT GTTGTTGGGTACTCGGCGTTATGAACGTTCTCTTGTATGCGTTGGCCTAC TGATGGACACAAAGCACGTCGCAAAGCAGCCCTATGTTGGCGGCGAGTCC GTGCTTTTGAATTGTGATGTAATGACACCTCGAGAGTTTGGGTCTGCCAA CAACCCTCCTCATTCTACTATCTGTCTTGCTACTGACTGTACATACTAGG AGATTAAGGGTGACAAGTAGCAACTTCAACTGAGACACATGTGCCCTGTC CAACCCGACGTCATGATTTCAAATTACATGTGGACCTCCGTCGCTACCCA CATTATGTTCGAATATATCTAGTTTGCCGCCCTCTCCTCATTGATTATTG TTGTGAGCTTGGTATACTTGGGGTCTTACGTACGTCCTAGCTGCTAGCTG CAGTGGTCCAGACACTTACCCGAAAGTAGTGTGCTGAGTTTGTTCAAACG GACATCAAGCGTAATGCAGACAGTACAGCACCATGTATATCCTTCCACAC AATACATCGCCCTGACGTATATTTGGTTCTTGGACTGAATTTTCGCTTGC TCTTGACTGAACAAATGTTTCGTTTACTAGATGCAGTACAATATATCTCC AGTATATATTGAGGGAGAAAGAGAACATGGCAACAGGCGCTGTTGATGTT GGGTAGGGTTTATCGTACGCGCTGGAACGACTGTTGCATGCCGTCCGCGC CGACAGGCTTGCATTTTTTTTATTCTCTCGATAGGCAGGCGCTAATTTAT GGCTCAGCTTCAGTGTTTTGCCGCTTCGAGGCCTTTTGCAATAAAAACAA GCGAGCAGCTGCTCGAATACAACAGTTTTGTCACAACAGTACAGTACAGC GTCTCCATGTAGCACATGTTTTGGTCTAACATACCATGACATCCTTGCCT GTGTTTTTTTTGGTTTTCCGCTAGATGCCTTACTTTCCAGCAGTTTCGAT AGATAACTACATGTTGCTACAAACCTACATCGTACAATAATACAATGCGG TGAGAGAGTACCAATGTCCCTTCCGCGACCGCTGGTTCTAGGGCTGTGCT CCTCTTTCTAAAAGCGATGTCTTGGCCTGCACGCCACATGATACCGCGCC GCTTGTGTGCTACATTTCTCCTGTTTCGCCCTTGAAGCTGAAGGAGAGTC AGACGAAGACAGAGGAGAACAAGTCACGCGCAAGAGAAAAGTCGAACAGG ACAATCTCGCGCCTTCGACTAGAAGCAAGGGACCAATGCAGTGTGCAAGT GAGTCGCGAACCAAAAGTGAAGTATCAAGGTTGTACCCAATGGTTTTGGG CCAGTCAACTCAAGCGACAGTACTGTCGGCAATCCAACAGCACTGTTGCG CAGCCCCATTTTACTGTGTAGATATATGTTGTCTTGATGGTCCCCCCAAG ACGTGGGTTTACTGTGTCAAGAAGGTGTGAATTGTGAGCCGTGTGCTTTC GACGAGGTCGTTGGCATGGAACAGTTGTTCGCACGGAATCGCCAACCTAG GGGCGACCCACGATACCTCCAAGCGAGAGTTATGTTTGGCACGTGACTGC AGGACAGTCCTGTACAAGCGATGCACAGCTAGCTCGTGGACTTAGTTCCT GAGACTTGGGCGGCCCGTTGCAGGACACATCGTAAAACTCTATGGAGGTT TCGATATCACCGTGGTATGAACGCCTTTTCAAACGCGATTGATCATCTCG AGAACTACCGCGCTGCTGAAAGTGATTAGTGTGCTGTTGGAAAAATCTTG AAGAGGTCTGTCTGTCGATTGTCGGGTTGTTTCGACCGCCAAGTAAGGTC TCCGTTCTCGAAAGAGACGCGTTTGGGAAAATGTTCGCACCCCAGTGTGA TACCTCGATTGGGTTGTACGGTATGTACTCAAGACTATGTGTGGCTGTTA GACAGCTTAGTGTACGCTGATGGTGGATTGATAATAAATTTCGATGTTTT CATCTGTTAATTCCGTAGCTGCGTCGTTGAGGCTCTCACCCGTCTTCTCT GATTCACTCTCAGTAGTGTGCCTCTTTTATGTGTTAGAAAAGAAAATAAC AAAGATGGACCTTTCGTTATACAGTCCACCCTTTTTTGTATGTCTCCATG AAGTAAAACTACAACTGACATTGGGTCCCGGTCTGTTTTGTTGCTTTGTT CTTGCCCCCCCCCCGTCCTCTCCGCTCGCCCGTAATTTCTCTCCGCTCTC ACTGTCGCCGCCGCCGCTGCCGCGACGAAAACGTGGAATCGGAATCGGGG CATGGATGTGATTGTTCGCTGTTGTGGCGTGAACTGTCGTTCAACAAACA AATTCGCTTCCGACCCAACCTCCTTCGGTATATGTTACAACCCCCCCCCG ACGTGCATGTGTATGTACGTATGGGTTTACCTGTACCCGTACCCCGCTTT ATACCGTTTTTTTTTTTTTTTTTTTTTTTTTCTTGACCGTACTAAATAAA ATACATTGAATCATGAAAAAAAAAAGTATCGGGGCAGACGCCAGAGACCC CGGTGGTCTCAAAGAAGTCGGGCCACTTGTACGAGAAGAGGCTGATCACC AAGTACATCGATGCGGAGGGAAAAGTGTGTGGGATGGTGCAAAATAGAAT TTACCCAAATTTTACCAAAAGGCGTCAGTAGGAGCTGCCGCACTTTTTTA GGGCGTGGGCAGCAATAGCGCACTCACCACACACAGAAGCCACGTTTCGC GTTTTTTTTTTGCAGACGAGTCCACCATGGACCACTGGGTCATGCTCCAA GCCCTCCTATCTTGAGCTTGTAGATTGAGTGTGTAAACTGTGTAGTTGCA ATACTTGTGTGTGTGTTTATTGTCGATTTAACGTTTTGCCATATACGCAA TAACTATCTTCTCGTCCTCAACGCTTGGTGATTGGAATACTCCTTGAACG TCCAGAATGTGTGACGCCGTAAATAGAGGACCAATTGCGCACAGGCAAGC CGTTTGTTCTTCCGTTGGCTCTTCTGTCGGAACTAATGTCGCGCATAAAT TACCGTAGTGAGCCCCAACAGCCACCTCCATGATCAACCACGAGTTGTTT TTTCGTTTTTTGCGGTCGCCTTCTGCTGCTGAACGTTGTGTTTGTTTTTC AAGTACTAAATGTATAGTAATGTGCCAATCAATTATCTCCGAGTGTGTTT CTTGCATCGCCTCCCCCCCTTCCCCCCAACGATGGACAACGTACTGCGTA CGCGCCGGCAGTGCCCCGCGACTGGGGAGGAGCTAACGGTGGATGACTTG CTGGAATTGCGATCCGATAAGGCTGTCAAGCCGCGCCCCGTGGAAGCGGC GTCCATCCCTGGGCTGTTGGCCATCATGCAGGTGCGACCCATATATATAT ATATATTAACTTACGTGCCGTGAAACCCGGTAGCATCGTACCATGATGCG AACGTTCTTCTTCAAACGCGATGGACCATCTCGGGAATGGAAACTTTGCG CGATCGAAAGAATAACCCGTCAATCGACATCTCTCAGCAAGATATTTCCA ATGACACAGTATCCGTTGTCAGCAGCGCGGTAGTTCCCAAAATAGTCATG TTTAAAAAGCGTTTGCACCCTCGTGATGTCGATACGTCCCGGTTTTACGG CAGATAATCTCTCTGCGCCGTAACTAAAGTCGGCTGAGTTCATAGAGGCA CGAAACCATTTCATTTTTTTTTTTTTTTACTTGTAATCCTACACATTTTT GGCGTTGATTCCCCAAATTTCACGAAAATTGACGAAATCCATCGGGAGAG CGCGGCGCAAAAAATATGTATCGGCCGAAAAAACGCCAAATTTTGTCCCT TTCGTATTTCTCCACGGGAAAAACTCGAAGAATCGAAAAACCCCCCGTAA AAATGGTTAAAATCAGCTCAATCTTGAGCGCCCATTAAACGCGGTCCATA AATCGTTTTACGCTTCGGAACAGCTCATATGAGTCCATCAGATTTCAGCT TTTCAACGATTCCAACCGCAGCCTCCGAACAGTCTTGGATCTGGGCATAT AATCTGCTGAGCAGAACCAACCTTACTTATGACGCAGGAGAAGTTTTTTG TTTCTTCTGCAGCGGCCTACCGGTGACGCCCAAACGAGAAGACGATCCTT TCATGAGAGACTGGCTCTCAAGGGGGCACCGCCTTCTCAATACGGGTTGG TCCTAGACCTTGGGATATGGTGCGGAGCACGCGGTTGGGTTTTGTTCTGT AGATGAACTAGCCATCCAGTGTCGGATGCAGTTAGAAAAGCTGTCCAAAG AGAGGTACAAAATACCATTGATTGTTGCGTAGGGCCGAGGTTCCGGGACC CCAGGAGCTTGAAAACGTGCTCTCTACACCTATGTACTTATCTATTATCT GCGCTATAACGGCGACGCCAACGACAACATAATCCCCGCACAGACGAGAG ACAGACTCTCGATAAGAGTAACGCCTTCTCCGGTGAGACGTAAATGGTGC GGGGCACACACCTGGGCTTTTATTTTCGTTTTTGTTGAGTATGCTGCAGA TGAGAACTGGTCAGCATCCAGGGTCGAAAGCAGATACTGTACAACAACTA GTTCGAGACCGAGGTAGGGGTGTGTGCTTCGAGAAATCCGCAGAGGGTTT TCGGCGGTGGTGGCGTACTGGATATCATGCGGCCTGCTTGTGTGTGCTAT GTGGCCATGTCTTGTGAAAGACATTCCTTGTCAATTTTTTAATATTTAAC TGTGTTTGTGTACTGATTTTACCGTGATGCGCAGAATGAGTGGGATGACT TGATGCTGGAGACTCACACCCTGAAGCAGCACCTTGACCAGACGAGACAG GAACTCAGTCAGGCTCTTTACCAGGTGGGTCTGTAAGAACTCAAGTCTTG ATGGCGACACCGAAAACAACAACAACAACGAAATTTTGGTGTTCATCACT TTTTTTTCTTTTCATATAGATGTTATCAGGTGTTACTCCCCTGTAGTACG TGAAATATTTTTGTGAATTCTTACCCTTTTTTTTTTTTTACCAGCAATAC GTCGCACTCTGTCCGCCTCAATGTAGTGCTGAACTCTGCAATGTACCGCC AAAGAGGAATCAGACATGGATTAGATACAGAAGAAAAAAATATCCCCTTT CCCTCCCCCCCCCCAAAAAAAAATGCCAAACAAATTATAATGATCACATA CAAAAAAAATGAAAAGCGCATGAAATCACTTTTGAGGAAGGTTCGAAAAT CTGAAATATATATATTTTTTGAAAAATCGACCTGTAGAGAGGTTTGCCTT CTAATCTCAGCTCCCCCTACCCTCCTACCTCGTTATTGAGCTATATTTTA CGAGAAGTGTATGCAATTGAAGTTTGAGGTCAGCTGCAAAACTAATCGTA GCATGGGTACAATGGAGTTACCATATGAGCGTTAGAGCTTCGTTCTACCA GCGGTGGCGAGTGAATGGGCTGACCTTGGACCTCTTCTCCATTTTGTACG GCCCTTCGTCGTTGTATCCCGTTTGACTGTATTGCACCCTGCTGAGCCAT CTATCATCTGCCTCGTTAGCCCACCCCTCTTTCCCCTCTGCTGGTCGTTG CCGGAATCTGATTTACCCTCACTCCTGCTTTTTCCGTCAGAATGACGCGG CATGTCGCGTGATCGCGCGCTTGGTGCGCGAGCGGGATGAGGCTCGGTCG CAGATGCAATCCCAACGAATTGCTCTGGCGCAGGCGCAGGCGGCTGCCCC TGCCGCTGCGGCCCCGGTGGAAGGTGAATGAGAGTTGACGAAAAATCACC TGTGTTGTTGCTGTAGGCCTCCGAACGAAAATCCGATGCACTTTTGGAAT TGAAAAAAACGCAACGTGAAACCAAAATACAAAATTGTGAGAGCGCACTT GTGATGAGCATGTCTTCTGTTTGTACTTGTAGCACGTATTGTTAAGCCTC ATTAGTCTGTCCGATTGTTTGAGATATCCTGGGCAAGGGCCGCCCCCCTC CGCCTCCTCTAGGCTCTTTGTTCTCGGCCCTTCCCCTGACCTAGCGACAG CCACGTGCTCGTCTGCCGTTTGGTCGGTGGGTTTACCTGTTCTGCGCGAT ATCGTGACGTACGCGAAAAAATAGAGATGCAAATGGAGGATGACGGTGGA GAAGAGGGGATCTCGGAGGCTGTACATAAGCAGATGGCTGTCAAGTGCAA AGAACTGTCGAAAAAGAGGTGCGTGGCAGACGGTTAGCCTGTTTCTTTTC AAGGGGAAGGGGGGGGGGACAGTGATATGGCTGTACCGTGATCGGATCAG GCTGTTTCTTTCGCTCTCCCGTCATCGGGCTGTGATGAGCTGCTGTTGGC TACTTTATTTACTTGTAGCTTATGGTTGGTGGCGGGGTTTGTAGGTGTGG TGTTGTCGTTGCCGCGGCTAATCGAACTTGAATCGTACATCTAGGGTGAT CTATCGACAAATATTACACACTCAATACTGGAACATACTATGGTGAAACG GAGAGGAGTTGGCGGGTACTTCTGGGATTTTTTATGCATCGGTCACACGC GGGGGTCGATTTCGACGAACGGGGGTGGTTTCCGACTTGGTAGCGCTAGA TGATGGCACCACATTACCTAAGTAGTTTTTAGGTGACAGGATTCCTATAC AATCCATCCAAGTGGTCGAGAGGGTATGTGCACGTTTGTACATTTCGTTT TTGAGTTGCTGTGTTTTTTTAGCAGCTTCGTTCTTGGATGGTTGTCCTCT GTGGGCGCAACAGACGCGTAGTATCGACAGCAAGTAAGAGAGCGATGAGA ACAGTGAGTGCCTTGTGAGACAAATGTCTCTGTATTCCGCTGCCCTGTTT GTGTTGTCTTTTTGATTTAACGTTCTGGCGTGCGGCTTTCTGCAGCATAC ACACCCCGTACAGTCAGTCAGTCATGATGTGGTTTGTTCTCTGCATTTCA GTCATTTGCCGCTGTCGTGGAATTTAAAAACCATGGGTACTCCTGTAACT CCTCTCTGTGCCTCTGTAATACCCATCACAGGACGTTTGTAAGGTCTGTA GAGCTAGTTCCCTATCCCCCCTTAATAATGTCGTGGGTGTTTGTCACAAA TGAATTCCGAAGAGGGTTTCGCCTATTTATCTAGCAGGGATTGTGTAGGA ATTGTAGACGGCCGGGGTACTTGCTGTAGGAGTCAAAGTATCGCCCTACC TTGTGTCCCTCTCCTTATTTGTTTTTGCATTTTCTTCAGGAAGAAGAGGG CTATGCCAGAGGATCTTGCCACTCCCGAGGCTATCTCTGCCTGGGAGGTC ACAGCCAACCACACCCTGCACAAGACCAATCCCGCCGGAGTTACGTGCCT GGACCTTCACCCTTCCAGGCCGAACCTGGTATGTCCCCGTAGAGTGCTGC AAGAACGCCCTAGGCCAAGTGTTATGGGGATGGGAATTCGAGGTCTCCAG CAGGCCTATATTTTTCCCAGTGATGCGTTTGAAAAGATGTCGTATATGAC ATTAGTTCCCAGTTTAGATGAAAATTTCAGCCAAATTATGACGCAACAAA GGGTAGGCACTGCTTACGTTGCATTGCGCTGAAGAGAGCGCTGCGAACGA CAGGCTTCTTACCTTGACCGGAGACTGGGCACACTTGATCTCAGAGAGTT GGAGAGTGGGATGCAAAAGGGCTTGTCTCGATCGGTGTCTGCGTTGAGTC GAGCTAGCCATGTTGCCTCGCGAAATATCGAAAAGATGCAGCTTGCACCC GGTCACAACTTTCGAGCCCTAAGGACCCGCTTGTATATGGTAATTTTTTT AATAGGAGAAAGTAGCAAGTCCTATCCCCATAACAGTTGGTGTTAGGGTG CGAGTTTTTTTTCAGTCTCGACTTTTTCGAATCAAATATCCTTGCCCCTC CCCCCCCCCCGAGGAGGTCTGGTCAGCAGTCTACCAACGACAGCATGCAA GACATGAGTACGGCTTCTCCCCTATTTAGTTTGGTCGGTGGGTGGGTAAG TAATCCAGTAGGTTCAAAATGACCCCTTATTAGTGCAATTTGCTGATAAG TGCGTACACCTGAAGTTTGCAGCCAGTGGCACAACCTCAAAATGGATACA ATGCACTTGGCATATGAGCTCCCGAGCTTTAGTTCAAAGTAACTGGCAGG GTTGACTTACGGATGAGAATTACAGTTGGTCACATGGAGGGTTTGAAAAG AAATCTCGACGGTGTCTTAACATTCATCTGAAAGGCTATATTTTTTCATG TTTTACGTGGAGTCACATGCGAGTGATATCGTGAGACTCCCTTGTGAGGG TTGATGTAGTCCACGTCGTGCGTGGCCCAAGAGGTGCGAGAGGTCTTGGT ACTCGGTCATGATCGAGTCAGATTTTTGTGTAATGTAAACAGGTTCCTGT CGATTTATCGAGCAGCAACACCAATTATCTGTCGATTCCGTTCGAAGTTT AAATCACCTGGGAAAAGCATGCGGAGGGTAGGAAGGATGGTGAAGGAGTA AGCGCTTGTTCGTGCACAGCTCGTCCAGCGTCATGTTCTCGAAGCTCTGA CAATGGGGGTAGCCAGTTCCCAGGCTATGATTAGCTCTTTGAAAAAAATG GGTACACTTTGCGTATGATGAGTTGTGCTGTAGAAGTCGTTTTTTTTGTG GGGGGGGGTTGTCCAACAGTCATGTACCTCTGGAAATGTTAGCCCCGAAA GTCAGCCTTTCGGGTGTACCTCTTGGTGACAAAAAGTAATATTCGACATG TGAGAAATATACCTGGGAAATATAATAAGCTTTCCCAGGTTTTAGACGGG CATCGATTGATAGTGTCCACACGATATGAGTGTAAGTGTGGCAGCTATGA ATGCATATTGATGTGGCATCATGTGCGGTCATTCAAGAACCGGTTGTTTT CGTTGGTTTTCAAGTGCTTGGTAATTAGGCAACGGTGAATGGTGATTGCT ATGTTGTCGTAGTCTAATGTCCAGTAATGAAACTGTTTCATGATTATCTA CGAACGGGTAGCTCTGTATTTGCTAGACTCAGCGTAAGGCCATGTATTCC GACAAAACTGTGGTCAACGATCGTCCATCAATGATGGGTCTGCTCATCTG TCATATATAGGGCGAGAAACAAGGTCAGCAGAAAGAGGATCCTTAATTAA GTGACTGCTGCTGATGGTGAAACAAAAGTGTTGATGTATAAAAATTATAA TGTAGAAATATTAAAGCAAAAAGAAAATGATTCCCTCTCCCGCCCCACAC TACCACCTATCCCAGGTCCTCACCGGCGGCGTGGACAAGACAGCGATCGT GTTCGACAGCGTCACGCAGGCACAGGTGGCCACGCTCTCGGCACACACAA AGCGCGTGACCGACGTGTGTTTCCACCCCACCAAGGAGCTCTTGGTCACC ACCTCTGTGGACAAGACCGCACGCGTGTGGCAGCACCAGCAAGACAAGGA TGGTGGCGCGGGAGGTTACAAGGTGGCGCACGTGCTGGATGACCACGAGG GGGAGGTGGTGGGCGCGACGATACACGCCACGGGAGACTTCCTGGCCACC GCGTCCAAGGACAAGAGTTGGGCCTTCTACGATATCAACCGGTGAGATTG CAGAGGGAGGACTGAGAGCTGGTCAAGGAAATGATTTCTCAAGGATGGCG CGGCGGGGGCGATAGACATGATATAACATGACTTGACTTGACGGCTTACA GATGACCACCTGACAGAAATAAATACCCTATTTAGCCACGAAACCTAGTC AATCCACTTGCAACAGTTAGTAGCCCTTTAAAGCTGATATCATTACTCCA TTGTACCCTCTGTTTGAGGTCGGAGGGAGTGGAGGCGTAGGCGAATCAAA GTTGTAGGTGGGAGGACGCGCTCGGGTCGAGGTTTTCGCAGCTTTTGTCG AGCTTTTGTCGAGTGTGTACAATGGCTATGTTCACAATGCAGCTGGGCGA ATGTGTTTGCAGATCGTTGTCCATAGCCTTGTGACAGTAGTTGTCTTGAT GTGTATATTCAGCTGTCTGTCAACGACATAATGGGAGGCTTGCAGGTTCC TTGCCAATATAATCCGGCCTACTTGATTAAGCTGGTTTTGATACTCATCC TTATGTGTTTTAGAGAGGCTGAGGTTTCTGTCTAGGGAAGCTTGTCCTGG TCATGTTCTGTTATCTCATTATCCTGTTACTAGTAGCCGGGATCCCTTCC CTCCCCTTCGAAACCAGTAAAACACGAAACGTGACAGTATTTTGTACAAT GACCAGTATTCAAATAGCGCGTTCCTCACGGTAATGTCGCCACTTATATA TATATAGTTATATATATATATATACATAATTTTTGGTCCCAGTTCTTGAA AAAATTACTGCGGCAACGTTAGCGAATTTTTGCGATAACCCTCGAGGAAC GGTGATTTATCAGCCGCGCGTTTTTGAGAAACAAGTCTTTACTTAATCTG CATATATTTTGTCGGTCCCTCGTCCCATGTCGTTGTCCAATTGAGTGCGA GCTAATTCTGGATTTGGAGAGTGGGTCTCACGTAGTCCTGCTCGTTCACG CTTTGGCATCGTCCCTTTTTCAACTTTGTCTCTGTGCCTGTCTGTGTGTC TGTCTGTTTATCTTTCTCTCTGTACCTCTCTTTATCCTTGTTTGGTTTTG GTGATGACGTGATGCGCCCAGGGGGAGGTTGTTAAAGCAGACGGGAAACC CGGACTACCCCGGCGGTTTCCGCTGTGTGAGGTTCCACCCTGACGGGCTT ATTCTCGCTACCGGTACAACCGATTCTTTCGTGCGCATCTGGGATATGAA GCAGTCGGTCAGTGTTTTGGTACTACGCAGTATATATTTTCAACTGAATG TATATTGATCTATTTTTTTATTCCTGCATGTCCATTGCTTTCACTTGTTC ATCACTTACTCTCTGATGACACACACAAAAAAAAAAGCCAACGTCTAGCT GTAGGCGACGAATATACAAGCGTAGTGATATTTTTGGGTGTTTGATTTTG ATAGTCATTCTCGGCGGTCGAAGGGCTGGTACTGGCTGAGACGCTTGCGA GTCTAGCAGTACAATGAGCACTATGTACGTTGCAGTAAAGACGCCATATA ATACGACGGAAATATTTCAATTGTCATTATCCATTAGCCCCACACGAGTC GGTCGCGCGACGATTGCAATGTTGATGAGTCAGTGGGAAGGTCTCCCGTT CCCCCCCACGCAATGATACAAACAAGGCACGCAAGGTATCGAGACATGAA TCATTTACACTCGAAGATGCGGGCCAACGACGTATCCCCGATATATTGAT GATGCTTTTTATTCAAGTAAAAGTCTAAGAAGAAGGAAAAGAAAAAAACA CGTTTCCGCCCCTCCTCTCGTCCCCCGTCCCCCACCCAAGAGGTTTGCAT AAGAGATGATATTTTTTGCTTCGTATGTATTTATTTCGGCCAGCATTTGT GCGTGTATTATTATTATTATTATTATTATTATTATTTTGTACTGCTATTT TCACAAACAGCACAACGTGGCGAACTTCGAGCATGAAGACGGCGGAGCTG TGAACGCGCTGGCCTTCAGTGAAAACGGGTACTACATGGCCTCGGCGGGC GATGATGGCTACGCCAGGCTGTGGGATCTACGCAAGCTGAACAACTTTCA AAAGCTAGCCATCGGGGCGGCTCCCGGCGCGGCGTCCTCCGTGGCGTTCG ACTACTCGGGGTCGTACCTGGCTGTTGGCGGCAAGGATTGCGCCAAGGTT TGAAAAACGAAGAGTAATTAGAACGCCTTCATCGTTTGAAAAATGTGACA CTTGTCTATATATTGGGTTTTCAGTTGACATCGCTTTTGAAAGTACGGAG ATGGTTACTTATTTGTGAAAGCAGCACTGCTTTTTGTCAGTGTATTCGCC GTAACGTGCAGAAGAGATGAGAAAAACAATATTTCGGCTGTTGTTGTCGT GTTCGTTATCGTTGTAATTAAGGCTTTTTTACTCGCCTTAGAGTTGAAAG ACACTGCTTATTTGTTATCGCTGGTTTTATGGATTTGTTTCTTACCATTG AAATTCCCAGGTGTTCGCCGTAAAGACATGGGACGAGCTGGCATCTCACG ATGATTACAAGGGCTCCGTCACAGGGGTGAAATTCGGCGCAAGTGCCAAC TTCCTGGTGAGTATATGTGGTGTTGTGTCCCGATCACACTCGATATCGAG GCGTACCAAGACCCGTTGATCACAGTCAGTTGGAAAAAAATAGAACTCAT GTGTTACATTTATTATTATTGTGTTCGACACGTATTCCCTACAGTAAGCG TTTGAAAGGGGCTTGAACATCAATTGGTCGCAGCATAAGATGAGAGCAAC GTGGATGGTGATTATTAAAAGCATTTTCTTGCCCCCCTGTCAGCCACTCT CGAAATTTGCGCCCGCGAAGGCGAAACGACTTGACCTACACTCTACGACC CCTTGTAGATGTTGGGTAGCCTGTGTGCAGCCGGTTCGAGTACTGCCACC AACACTTGAAACATTTCCACCGGCATCACCGCCCCGCGAGGTGTGGTGAG GGGGAACCATTCTGCGGTGCCACAAATGTGCAGCCCGTGGACCCCCGCTA TTGCTCTGACAGACCTCGGTTGCTGTGTGTCCAATCTCGGGGGTGTATAA CGTGTACGGTCCCGTACAGTCGTCTTGTGCCGCTCGAGAGACAGATGATT GTCGTTTGCCCCCCGTTGTTTTCAATATGTCATACCCTACTCGGTGGTGG TACTGTCAAGTATTTCCTTGCAGTTGTTTTAATGCCCGGGCATATATGTA GTGATCCTTACCGAAGGCGTACACGGCTTCGGTTGTGATGATGAAAACCG TTATTCAATGCTGTTTGCAAAAAGGCGAGGTGTCGAGAACGACCTCCTTG CTTGTAAAAAATATTGAGTATCGCGGGGTTTTTTCCACTAGGCAGTCTCC TGTGTCAAAAACAAAACAAACATTTACGTATGTGGATATGTAGCGCACGG GGGTCTGGAGGTGATGCCGCTCTTGTGGTGCGCTTCAAAGCGTTTGTTAC GTTTTAGGGCTGTCAGTCGCGAACTCGTGTTTTCTGTCCTTTGTCTGTTG TCCGTTTGCATATTTGTCTCACTGTCTTGTCTCTGCCTCTTGCTCTTTTC AAAATGGCTGGCGACGGCCTTGTTTTCGTCCCTTATATGCGTGCGTTGCT TTACATGCTCCGCATTTACAGGCAACATCATCCATGGACAGGACGGTACG TGTCTATGGCAGTGCGTAATAGCGCATGTATGATGATTGATCTGTAATAC AATGGGAGGCACGTGCGCGCGGGTGAGCGCGGCGGGGGGTACGAGGCAAT CTCAAGGGTGCGGGGGGAGGCAATTCACTCGGTCCAAAGAACAATAGCAG ACCAGAGCGTCTTGCTTGCGAACTGTCAGCAACCACGTCGATGTCGTTGC GAGAAATGGTTCAGGGAGGGGGGGAAGGCAGGGGAGGCTGCTCTCCGCTG TTTATTGTATTGACCGAGCAAATGTGGATTTTTTCTAGTGAAGTGACGGG AAAGATCTACCTCACTGCTGCAGTATTTTTAATTTTGTTTATCCTGTGGA ATAGCGCAGCTAAGGTCGACACGTGGATATCTTGAATGAAAAGCTCTCTT TACCAACTTTCTAACGCAACTACAACGGGTTTGGGCAATTTTCGCTCTCT GCATTTATTTGAAACGGTAGTTTGACAAATTCCGG
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Coding sequence (CDS) from alignment at H-paniculata_contig1466:12109..26093+

>mRNA_H-paniculata_contig1466.2785.1 ID=mRNA_H-paniculata_contig1466.2785.1|Name=mRNA_H-paniculata_contig1466.2785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3060bp|location=Sequence derived from alignment at H-paniculata_contig1466:12109..26093+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGTGTGCAAATGCAGTGTGCAATATCGGGGCAGACGCCAGAGACCC
CGGTGGTCTCAAAGAAGTCGGGCCACTTGTACGAGAAGAGGCTGATCACC
AAGTACATCGATGCGGAGGGAAAATATCGGGGCAGACGCCAGAGACCCCG
GTGGTCTCAAAGAAGTCGGGCCACTTGTACGAGAAGAGGCTGATCACCAA
GTACATCGATGCGGAGGGAAAATGCCCCGCGACTGGGGAGGAGCTAACGG
TGGATGACTTGCTGGAATTGCGATCCGATAAGGCTGTCAAGCCGCGCCCC
GTGGAAGCGGCGTCCATCCCTGGGCTGTTGGCCATCATGCAGTGCCCCGC
GACTGGGGAGGAGCTAACGGTGGATGACTTGCTGGAATTGCGATCCGATA
AGGCTGTCAAGCCGCGCCCCGTGGAAGCGGCGTCCATCCCTGGGCTGTTG
GCCATCATGCAGAATGAGTGGGATGACTTGATGCTGGAGACTCACACCCT
GAAGCAGCACCTTGACCAGACGAGACAGGAACTCAGTCAGGCTCTTTACC
AGAATGAGTGGGATGACTTGATGCTGGAGACTCACACCCTGAAGCAGCAC
CTTGACCAGACGAGACAGGAACTCAGTCAGGCTCTTTACCAGAATGACGC
GGCATGTCGCGTGATCGCGCGCTTGGTGCGCGAGCGGGATGAGGCTCGGT
CGCAGATGCAATCCCAACGAATTGCTCTGGCGCAGGCGCAGGCGGCTGCC
CCTGCCGCTGCGGCCCCGGTGGAAGAATGACGCGGCATGTCGCGTGATCG
CGCGCTTGGTGCGCGAGCGGGATGAGGCTCGGTCGCAGATGCAATCCCAA
CGAATTGCTCTGGCGCAGGCGCAGGCGGCTGCCCCTGCCGCTGCGGCCCC
GGTGGAAGAGATGCAAATGGAGGATGACGGTGGAGAAGAGGGGATCTCGG
AGGCTGTACATAAGCAGATGGCTGTCAAGTGCAAAGAACTGTCGAAAAAG
AGAGATGCAAATGGAGGATGACGGTGGAGAAGAGGGGATCTCGGAGGCTG
TACATAAGCAGATGGCTGTCAAGTGCAAAGAACTGTCGAAAAAGAGGAAG
AAGAGGGCTATGCCAGAGGATCTTGCCACTCCCGAGGCTATCTCTGCCTG
GGAGGTCACAGCCAACCACACCCTGCACAAGACCAATCCCGCCGGAGTTA
CGTGCCTGGACCTTCACCCTTCCAGGCCGAACCTGGAAGAAGAGGGCTAT
GCCAGAGGATCTTGCCACTCCCGAGGCTATCTCTGCCTGGGAGGTCACAG
CCAACCACACCCTGCACAAGACCAATCCCGCCGGAGTTACGTGCCTGGAC
CTTCACCCTTCCAGGCCGAACCTGGTCCTCACCGGCGGCGTGGACAAGAC
AGCGATCGTGTTCGACAGCGTCACGCAGGCACAGGTGGCCACGCTCTCGG
CACACACAAAGCGCGTGACCGACGTGTGTTTCCACCCCACCAAGGAGCTC
TTGGTCACCACCTCTGTGGACAAGACCGCACGCGTGTGGCAGCACCAGCA
AGACAAGGATGGTGGCGCGGGAGGTTACAAGGTGGCGCACGTGCTGGATG
ACCACGAGGGGGAGGTGGTGGGCGCGACGATACACGCCACGGGAGACTTC
CTGGCCACCGCGTCCAAGGACAAGAGTTGGGCCTTCTACGATATCAACCG
GTCCTCACCGGCGGCGTGGACAAGACAGCGATCGTGTTCGACAGCGTCAC
GCAGGCACAGGTGGCCACGCTCTCGGCACACACAAAGCGCGTGACCGACG
TGTGTTTCCACCCCACCAAGGAGCTCTTGGTCACCACCTCTGTGGACAAG
ACCGCACGCGTGTGGCAGCACCAGCAAGACAAGGATGGTGGCGCGGGAGG
TTACAAGGTGGCGCACGTGCTGGATGACCACGAGGGGGAGGTGGTGGGCG
CGACGATACACGCCACGGGAGACTTCCTGGCCACCGCGTCCAAGGACAAG
AGTTGGGCCTTCTACGATATCAACCGGGGGAGGTTGTTAAAGCAGACGGG
AAACCCGGACTACCCCGGCGGTTTCCGCTGTGTGAGGTTCCACCCTGACG
GGCTTATTCTCGCTACCGGTACAACCGATTCTTTCGTGCGCATCTGGGAT
ATGAAGCAGTCGGGGGAGGTTGTTAAAGCAGACGGGAAACCCGGACTACC
CCGGCGGTTTCCGCTGTGTGAGGTTCCACCCTGACGGGCTTATTCTCGCT
ACCGGTACAACCGATTCTTTCGTGCGCATCTGGGATATGAAGCAGTCGCA
CAACGTGGCGAACTTCGAGCATGAAGACGGCGGAGCTGTGAACGCGCTGG
CCTTCAGTGAAAACGGGTACTACATGGCCTCGGCGGGCGATGATGGCTAC
GCCAGGCTGTGGGATCTACGCAAGCTGAACAACTTTCAAAAGCTAGCCAT
CGGGGCGGCTCCCGGCGCGGCGTCCTCCGTGGCGTTCGACTACTCGGGGT
CGTACCTGGCTGTTGGCGGCAAGGATTGCGCCAAGCACAACGTGGCGAAC
TTCGAGCATGAAGACGGCGGAGCTGTGAACGCGCTGGCCTTCAGTGAAAA
CGGGTACTACATGGCCTCGGCGGGCGATGATGGCTACGCCAGGCTGTGGG
ATCTACGCAAGCTGAACAACTTTCAAAAGCTAGCCATCGGGGCGGCTCCC
GGCGCGGCGTCCTCCGTGGCGTTCGACTACTCGGGGTCGTACCTGGCTGT
TGGCGGCAAGGATTGCGCCAAGGTGTTCGCCGTAAAGACATGGGACGAGC
TGGCATCTCACGATGATTACAAGGGCTCCGTCACAGGGGTGAAATTCGGC
GCAAGTGCCAACTTCCTGGTGTTCGCCGTAAAGACATGGGACGAGCTGGC
ATCTCACGATGATTACAAGGGCTCCGTCACAGGGGTGAAATTCGGCGCAA
GTGCCAACTTCCTGGCAACATCATCCATGGACAGGACGGTACGTGTCTAT
GGCAGTGCGTAAGCAACATCATCCATGGACAGGACGGTACGTGTCTATGG
CAGTGCGTAA
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