mRNA_H-paniculata_contig14561.2733.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14561.2733.1
Unique NamemRNA_H-paniculata_contig14561.2733.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14561.2733.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 1.300e-76
Identity = 164/401 (40.90%), Postives = 223/401 (55.61%), Query Frame = 1
Query:    1 IEDTFLWVAHRKLGVGRAELMEGVRVLYNDHRKVPWDREKDPGCK*PDFFFARHPRLSERRSCIYEANRITADAEPR-----REHSTPAGRKR*PT-YSWRRTMC*VPTKFEPHGFRCHCPRSKVIARRGQKVVGMKRSNSRKNITVDAPVTVAGAVMPPVVIFKGQRVQVAWLVTGDNRFPGATYIATDSSDVQGMVFVCFFKEFDRYLGASGFKERKYHILVLDGHASHLNLQI-----SLNIELFQLPSNSPHMIQPLDVAAFDTPKKAITSVLQPLSKPWQRNAG----ESGYVGVIGQAWAGRFTVP*MKASFQGAGLWPVNMQRVLDKLIGVGKRKSRTDDYPFLADIPVAISENELERYLGLGLVRQLKFTSYTLTGIRVGTVFFVEFLKTQER 1158
            +ED  L+ A   +G+ R  L E VR L ND R +PWD    PG    D FF RHP LSER + IYEANRI +D E R     ++      +++ P  + W        T     G +      K IA  GQKVVG  RSNSR+ +TV   ++ AGA + P +I+KGQR+Q  W V G N  P A    TDSS +QG VFV + ++F R L   G      H+LVLDGHASH+  ++      LNI L+Q+PS+S H++QPLDV +F + K+ IT VL        RN G    +S  +G++G AW   F+     +SF GAGLWPV+ +R + +L GVGKRK R+   P + DI VAIS+  L   LG   VR+L+     + GI + TV    F+K +++
Sbjct:   67 VEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDE----TGSTSQGTKT----MKAIAESGQKVVGAMRSNSRETVTVVVTISAAGATLAPWIIYKGQRLQADW-VKGRNGPPNARLAVTDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPA---RNGGRVPAKSDMLGILGDAWLRSFSEQQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKNLADNLGPRTVRELQQKGQCVKGILINTVMLGAFVKAKKK 455          
BLAST of mRNA_H-paniculata_contig14561.2733.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 5.420e-76
Identity = 166/408 (40.69%), Postives = 222/408 (54.41%), Query Frame = 1
Query:    1 IEDTFLWVAHRKLGVGRAELMEGVRVLYNDHRKVPWDREKDPGCK*PDFFFARHPRLSERRSCIYEANRITADAEP-----RREHSTPAGRKR*PTYSWRRTMC*VPTKFEPHGFRCHCPRS--------KVIARRGQKVVGMKRSNSRKNITVDAPVTVAGAVMPPVVIFKGQRVQVAWLVTGDNRFPGATYIATDSSDVQGMVFVCFFKEFDRYLGASGFKERKYHILVLDGHASHLNLQI-----SLNIELFQLPSNSPHMIQPLDVAAFDTPKKAITSVLQPLSKPWQRNAG----ESGYVGVIGQAWAGRFTVP*MKASFQGAGLWPVNMQRVLDKLIGVGKRKSRTDDYPFLADIPVAISENELERYLGLGLVRQLKFTSYTLTGIRVGTVFFVEFLKTQER 1158
            +ED  L+ A   +G+ R  L E VR L ND R + WD    PG    D FF RHP LSER + IYEANRI +D E       ++      ++  PT       C    + E        P S        KVIA  GQKVVG  RSNSR N+TV   ++ AGA + P +I+KGQR+Q  W V G N  P A    TDSS +QG VFV + ++F R L   G      H+LVLDGHASH+  ++      LNI L+Q+PS+S H++QPLDV +F + K  IT VL        RN G    +S  +G++G AW   F+     +SF GAGLWPV+ +R + +L GVGKRK R+   P + DI VAIS+ +L   LG   VR+L+     + GI + TV    F+K +++
Sbjct:   67 VEDALLYAARHFIGIDRTALQEHVRQLCNDGRDISWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETCLQTFYKDFGEFVDKENIPT-------CGTQMRQEYTDLERAVPGSTPQGTKTMKVIAESGQKVVGAMRSNSRDNVTVVVTISAAGATLAPWIIYKGQRMQADW-VKGRNGPPNARLAVTDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKWEITKVLSAFPA---RNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKDLADNLGPRTVRELQQKGQCVKGILINTVMLGAFVKAKKK 463          
BLAST of mRNA_H-paniculata_contig14561.2733.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 6.090e-74
Identity = 156/376 (41.49%), Postives = 209/376 (55.59%), Query Frame = 1
Query:    1 IEDTFLWVAHRKLGVGRAELMEGVRVLYNDHRKVPWDREKDPGCK*PDFFFARHPRLSERRSCIYEANRITADAEPR-----REHSTPAGRKR*PT-YSWRRTMC*VPTKFEPHGFRCHCPRSKVIARRGQKVVGMKRSNSRKNITVDAPVTVAGAVMPPVVIFKGQRVQVAWLVTGDNRFPGATYIATDSSDVQGMVFVCFFKEFDRYLGASGFKERKYHILVLDGHASHLNLQI-----SLNIELFQLPSNSPHMIQPLDVAAFDTPKKAITSVLQPLSKPWQRNAG----ESGYVGVIGQAWAGRFTVP*MKASFQGAGLWPVNMQRVLDKLIGVGKRKSRTDDYPFLADIPVAISENELERYLGLGLVRQLK 1083
            +ED  L+ A   +G+ R  L E VR L ND R +PWD    PG    D FF RHP LSER + IYEANRI +D E R     ++      +++ P  + W        T     G +      KVI   GQKV G  RSNSR+N+TV   ++ AGA + P +I+KGQR+Q  W V G N  P A     DSS +QG VFV + ++F R L   G      H+LVLDGHASH+  ++      LNI L+Q+PS+S H++QPLDV +F + K+ IT VL        RN G    +S  +G++G AW   F+     +SF GAGLWPV+ +R + +L GVGKRK R+   P + DI  AIS+  L   LG   VR+L+
Sbjct:   67 VEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDE----TGSTSQGTKT----MKVITESGQKVGGAMRSNSRENVTVVVTISAAGATLAPWIIYKGQRLQADW-VKGRNGPPNARLAVIDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPA---RNGGRVPAKSDMLGILGDAWLRSFSEERNTSSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITGAISDKHLADNLGPRTVRELQ 430          
BLAST of mRNA_H-paniculata_contig14561.2733.1 vs. uniprot
Match: A0A6H5L1T0_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T0_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 2.500e-73
Identity = 162/385 (42.08%), Postives = 219/385 (56.88%), Query Frame = 1
Query:    1 IEDTFLWVAHRKLGVGRAELMEGVRVLYNDHRKVPWDREKDPGCK*PDFFFARHPRLSERRSCIYEANRITADAEPRRE--HSTPAGRKR*PTYSWRRTMC*VPTKFEPHGFRCHCPRSKVIARRGQKVVGMKRSNSRKNITVDAPVTVAGAVMPPVVIFKGQRVQVAWLVTGDNRFPGATYIATDSSDVQGMVFVCFFKEFDRYLGASGFKERKYHILVLDGHASH-----LNLQISLNIELFQLPSNSPHMIQPLDVAAFDTPKKAITSVLQ--PLSKPWQRNAGESGYVGVIGQAWAGRFTVP*MKASFQGAGLWPVNMQRVLDKLIGVGKRKSRTDDYPFLADIPVAISENELERYLGLGLVRQLKFTSYTLTGIRVGTVF 1128
            +ED  ++ +   L +GR EL + VR +  D RKVPWD +K PG    + F ARHP LSER + IYEANRI  D EPR +  +   A           R +    T   P G +      K I  RG KV G +RSNSR+N TV A +   G    P +IFKGQR+Q AW +  +N  P A Y  T+SS +Q  VF+ + ++  + L A G   +    LVLDGHASH     ++L ISL+++LFQLPS++ H+ QPLDV  F T K  IT VL   PL K   R+  +    GVI +AWAG FT    KA+F+G+GLWPV+M++ +++L    KRK R  D P   D+ V  S+++LER LG   + +LK     + G+RV TVF
Sbjct:   81 VEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETSSTPQGTKS----GKAIVARGTKVPGARRSNSRENTTVVATIGADGHTFHPTIIFKGQRMQPAW-IQDNNGVPDAKYTVTESSFIQSHVFLDYLRDLRKQLDARGLLGKA--ALVLDGHASHTTFDAISLGISLDMDLFQLPSHTSHITQPLDVGTFGTFKMEITKVLTAYPL-KNGGRSPVKRDMAGVIAEAWAGSFTPENNKAAFKGSGLWPVSMEKAINRLHS--KRKQRDHDRPIREDLAVVASKDQLERDLGRAALLELKRHGLMIEGLRVNTVF 455          
BLAST of mRNA_H-paniculata_contig14561.2733.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 1.220e-72
Identity = 157/408 (38.48%), Postives = 216/408 (52.94%), Query Frame = 1
Query:    1 IEDTFLWVAHRKLGVGRAELMEGVRVLYNDHRKVPWDREKDPGCK*PDFFFARHPRLSERRSCIYEANRITADAEPRREHSTPAGRKR*PTYSWRRTMC*VPTKFEPHGFRCH-------CPRS----KVIARRGQKVVGMKRSNSRKNITVDAPVTVAGAVMPPVVIFKGQRVQVAWLVTGDNRFPGATYIATDSSDVQGMVFVCFFKEFDRYLGASGFKERKYHILVLDGHASHLNLQI-----SLNIELFQLPSNSPHMIQPLDVAAFDTPKKAITSVLQPLSK------PWQRNAGESGYVGVIGQAWAGRFTVP*MKASFQGAGLWPVNMQRVLDKLIGVGKRKSRTDDYPFLADIPVAISENELERYLGLGLVRQLKFTSYTLTGIRVGTVFFVEFLKTQER 1158
            IED  L+     L V R  L+E VR+L  D RK PWD EK PG      F  RHPR+ ER + IYEANR+T ++EPR                + R    +    +P     H        P+     K   + GQKVV   R+NSR+N T+   ++  G+   P +IFKGQR+Q  W     N  P A Y  TDSS +QG VF+ + K+F + L   G  + K HIL+LDGHASH+++++      LNI LFQLPS++ H+ QPLDV AF   K+ +T VL    +      P +R+       GVI  AW   FT    ++SF GAGLWPVNM+R + +L G  KR       P L D+P+A+   +LE+ +G   +RQLK   +  TG+RV TV     ++ ++R
Sbjct:   66 IEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPR-------------IVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAE-KNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVP-----GVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKR 453          
BLAST of mRNA_H-paniculata_contig14561.2733.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 1.880e-71
Identity = 161/407 (39.56%), Postives = 211/407 (51.84%), Query Frame = 1
Query:    1 IEDTFLWVAHRKLGVGRAELMEGVRVLYNDHRKVPWDREKDPGCK*PDFFFARHPRLSERRSCIYEANRITADAEPRREHS------------TPAGRKR*PTYSWRRTMC*VPTKFEPHGFRCHCPRSKVIARRGQKVVGMKRSNSRKNITVDAPVTVAGAVMPPVVIFKGQRVQVAWLVTGDNRFPGATYIATDSSDVQGMVFVCFFKEFDRYLGASGFKERKYHILVLDGHASHLNLQ-----ISLNIELFQLPSNSPHMIQPLDVAAFDTPKKAITSVLQPLSKPWQRNAG----ESGYVGVIGQAWAGRFTVP*MKASFQGAGLWPVNMQRVLDKLIGVGKRKSRTDDYPFLADIPVAISENELERYLGLGLVRQLKFTSYTLTGIRVGTVFFVEFLKTQER 1158
            +ED  L+     + +  A+L E VR L ND R +PW  +K PG    + F  RH R+S R + IYE+NR+T+ AE  R H              PA       + W           E  G        +V+A RGQ VV   RS SR+N T+   +  AGAV+ P +IFKGQR    W V   N  PGA Y  T+SS + G VF+ + K F + LG     + K H+LVLDGHASH+ L      ISLNI L QLPS+  H+ QPLDVA F   KK +  V+Q       RN G    +    G+IG AW   FT    KASF GAGLWPV+ +R L +L+   KRK    D P L D+P+A++   LE  +G   VR L+   +T+TG+RV TV    FL  + +
Sbjct:   81 LEDVLLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTS-AEDERLHKFYDFWGQFIDEHQPAA-----DHVW--------NTDESGGTVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFNGDW-VADLNGPPGAYYDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPA---RNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWPVDRERALSRLLRP-KRKVTETDRPPLEDVPIAVTNERLEELIGDRGVRALRAKGHTITGLRVSTVVLGNFLPNKNK 468          
BLAST of mRNA_H-paniculata_contig14561.2733.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 5.820e-71
Identity = 157/408 (38.48%), Postives = 216/408 (52.94%), Query Frame = 1
Query:    1 IEDTFLWVAHRKLGVGRAELMEGVRVLYNDHRKVPWDREKDPGCK*PDFFFARHPRLSERRSCIYEANRITADAEPRREHSTPAGRKR*PTYSWRRTMC*VPTKFEPHGFRCH-------CPRS----KVIARRGQKVVGMKRSNSRKNITVDAPVTVAGAVMPPVVIFKGQRVQVAWLVTGDNRFPGATYIATDSSDVQGMVFVCFFKEFDRYLGASGFKERKYHILVLDGHASHLNLQI-----SLNIELFQLPSNSPHMIQPLDVAAFDTPKKAITSVLQPLSK------PWQRNAGESGYVGVIGQAWAGRFTVP*MKASFQGAGLWPVNMQRVLDKLIGVGKRKSRTDDYPFLADIPVAISENELERYLGLGLVRQLKFTSYTLTGIRVGTVFFVEFLKTQER 1158
            IED  L+     L V R  L+E VR+L  D RK PWD EK PG      F  RHPR+ ER + IYEANR+T ++EPR                + R    +    +P     H        P+     K   + GQKVV   R+NSR+N T+   ++  G+   P +IFKGQR+Q  W     N  P A Y  TDSS +QG VF+ + K+F + L   G  + K HIL+LDGHASH+++++      LNI LFQLPS++ H+ QPLDV AF   K+ +T VL    +      P +R+       GVI  AW   FT    ++SF GAGLWPVNM+R + +L G  KR       P L D+P+A+   +LE+ +G   +RQLK   +  TG+RV TV     ++ ++R
Sbjct:  307 IEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPR-------------IVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAE-KNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVP-----GVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQLEQDIGERGMRQLKAAGHLTTGLRVSTVMLGSVIRQRKR 694          
BLAST of mRNA_H-paniculata_contig14561.2733.1 vs. uniprot
Match: A0A6H5JGP6_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP6_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 1.280e-68
Identity = 162/455 (35.60%), Postives = 224/455 (49.23%), Query Frame = 1
Query:    1 IEDTFLWVAHRKLGVGRAELMEGVRVLYNDHRKVPWDREKDPGCK*PDFFFARHPRLSERRSCIYEANRITADAEPR-----REHSTPAGRKR*PT-YSWRRTMC*VPTKFEPHGFRCHCPRSKVIARRGQKVVGMKRSNSRKNITVDAPVTVAGAVMPPVVIFKGQRVQVAWLVTGDNRFPGATYIATDSSDVQGMVFVCFFKEFDRYLGASGFKERKYHILVLDGHASHLNLQI-----SLNIELFQLPSNSPHMIQPLDVAAFDTPKKAITSVLQP------------------LSKPWQRNAGE----------------------------------------SGYVGVIGQAWAGRFTVP*MKASFQGAGLWPVNMQRVLDKLIGVGKRKSRTDDYPFLADIPVAISENELERYLGLGLVRQLKFTSYTLTGIRVGTVFFVEFLKTQER 1158
            +ED  L+ A   +G+ RA L E VR L ND R +PWD    PG    D FF RHP LSE  + IYEANRI +D E R     ++      +++ P  + W        T   P G +      KVIA  GQKVVG   S SR+N+TV   ++  GA + P +I+KGQR+Q  W   G N  P A    T+SS +QG+VFV + ++F R L   G      H+LVLDGHASH+  ++      LNI L+Q+PS+S H++QPLDV +F + K+ I  VL                    L   W R+  E                                        S  +G++G AW   F+     +SF GAGLWPV+ +R + +L GVGKRK R+   P + DI VAIS+ +L   LG   VR+L+     + GI + TV    F+K +++
Sbjct:   26 VEDALLYAARHFIGIDRAALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSECSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDE----TGSTPQGTKT----MKVIAESGQKVVGAIHSKSRENVTVVVTISTVGATLAPWIIYKGQRLQADW-AKGRNAPPNARLAVTNSSFMQGIVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREIPKVLSAFQARNGGRVPAKSDMLGLLGDAWLRSFSEEQNISSFAGAGLWLVDGERAMGQLQGWRFPTRILPTVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGERAMGRLQGVGKRKERSGARPPVEDITVAISDKDLADNLGPRTVRELQQKGQCVKGILINTVMVGAFVKAKKK 471          
BLAST of mRNA_H-paniculata_contig14561.2733.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 7.430e-67
Identity = 147/387 (37.98%), Postives = 199/387 (51.42%), Query Frame = 1
Query:    1 IEDTFLWVAHRKLGVGRAELMEGVRVLYNDHRKVPWDREKDPGCK*PDFFFARHPRLSERRSCIYEANRITADAEPRREHSTPAGRKR*PTYSWRRTMC*VPTKFEPHGFRCH-----------CPRSKVIARRGQKVVGMKRSNSRKNITVDAPVTVAGAVMPPVVIFKGQRVQVAWLVTGDNRFPGATYIATDSSDVQGMVFVCFFKEFDRYLGASGFKERKYHILVLDGHASHLNLQI-----SLNIELFQLPSNSPHMIQPLDVAAFDTPKKAITSVLQPLSKPWQRNAGESGYVGVIGQAWAGRFTVP*MKASFQGAGLWPVNMQRVLDKLIGVGKRKSRTDDYPFLADIPVAISENELERYLGLGLVRQLKFTSYTLTGIR 1113
            +ED  L+ A   L VGR  L + VR L ND R++PWD EK PG      F  RHPR++ER + IYEANRIT D EPR                +      +  +F+P     H              +K  A  GQKVVG  R+NSR+N TV A ++  G    P +IFKGQR+Q    V   N   GA +  TDSS +QG VF+ + K+F + LG  G  + K HIL+LDGHASH+++++     +L I LFQLPS++ H+ QPLDV AF + KK+I                                     K+ F GA LWPVN +R L +L G  K+K R D+   L DIP+A    + E+ +G+  +R L+   +T+TGIR
Sbjct:   66 LEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPR-------------MVQFYERWAALLDEFKPEANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFKGQRLQADCFVER-NGPEGARHTCTDSSFMQGDVFMNYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSIN------------------------------------KSLFAGASLWPVNKERALGRLKGTAKKKERRDERTPLQDIPIAAHNEQPEKDIGVRALRVLRGQGHTVTGIR 402          
BLAST of mRNA_H-paniculata_contig14561.2733.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.050e-65
Identity = 154/382 (40.31%), Postives = 202/382 (52.88%), Query Frame = 1
Query:    1 IEDTFLWVAHRKLGVGRAELMEGVRVLYNDHRKVPWDREKDPGCK*PDFFFARHPRLSERRSCIYEANRITADAEPR--------------------REHSTPAGRKR*PTYSWRRTMC*VPTKFEPHGFRCHCPRSKVIARRGQ--KVVGMKRSNSRKNITVDAPVTVAGAVMPPVVIFKGQRVQVAWLVTGDNRFPGATYIATDSSDVQGMVFVCFFKEFDRYLGASGFKERKYHILVLDGHASHLNLQI-----SLNIELFQLPSNSPHMIQPLDVAAFDTPKKAITSVLQPLSKPWQRNAG-----ESGYVGVIGQAWAGRFTVP*MKASFQGAGLWPVNMQRVLDKLIGVGKRKSRTDDYPFLADIPVAISENELER 1050
            +E   L+ A   L V R  L + VR L ND R++PWD EK PG      F  RH R++ER + I+EAN IT D EPR                      H+T       P    RR     P   E  G R H  R    +R G   KVVG  RSNSR+N TV A ++  G    P +IFKGQR+Q  W V   N   GA Y  TD S +QG +F+ + K+F + L   G  + K HIL+LDGHASH+++++     +L I LFQLPS++ H+ QPLDV AF + KK++T VL      + RN+G     +    GVI  AW   FT    K+SF GAGLWPVN +R L +L G   +K R D+ P L D+P+A    +LE+
Sbjct:   66 LEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERWAALLDEVKPEANHVHNTDETE---PPRXHRRKG---PEAAE--GARAH--RHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVER-NGLEGAKYTCTDYSFMQGDLFIAYLKDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLA----SFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTATKKERRDERPPLQDVPIAALNEQLEK 432          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14561.2733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B2KWI5_ECTSI1.300e-7640.90Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5JK80_9PHAE5.420e-7640.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5E2_9PHAE6.090e-7441.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1T0_9PHAE2.500e-7342.08Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV04_9PHAE1.220e-7238.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYX7_9PHAE1.880e-7139.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ12_9PHAE5.820e-7138.48Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JGP6_9PHAE1.280e-6835.60DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JFM5_9PHAE7.430e-6737.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRA3_9PHAE1.050e-6540.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14561contigH-paniculata_contig14561:177..1349 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score73.6
Seed ortholog evalue1e-10
Seed eggNOG ortholog2880.D8LN28
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DDE superfamily endonuclease
EggNOG OGs2CZS4@1,2SBGG@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1158
Cds size507
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14561.2733.1prot_H-paniculata_contig14561.2733.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14561 441..962 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929158.919861-UTR-H-paniculata_contig14561:176..4401622929158.919861-UTR-H-paniculata_contig14561:176..440Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14561 177..440 -
1691480753.6511447-UTR-H-paniculata_contig14561:176..4401691480753.6511447-UTR-H-paniculata_contig14561:176..440Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14561 177..440 -
1622929158.9927528-UTR-H-paniculata_contig14561:962..13491622929158.9927528-UTR-H-paniculata_contig14561:962..1349Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14561 963..1349 -
1691480753.6773548-UTR-H-paniculata_contig14561:962..13491691480753.6773548-UTR-H-paniculata_contig14561:962..1349Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14561 963..1349 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929158.9436116-CDS-H-paniculata_contig14561:440..6471622929158.9436116-CDS-H-paniculata_contig14561:440..647Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14561 441..647 -
1691480753.6614823-CDS-H-paniculata_contig14561:440..6471691480753.6614823-CDS-H-paniculata_contig14561:440..647Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14561 441..647 -
1622929158.9778702-CDS-H-paniculata_contig14561:662..9621622929158.9778702-CDS-H-paniculata_contig14561:662..962Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14561 663..962 -
1691480753.6694071-CDS-H-paniculata_contig14561:662..9621691480753.6694071-CDS-H-paniculata_contig14561:662..962Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14561 663..962 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14561.2733.1

>prot_H-paniculata_contig14561.2733.1 ID=prot_H-paniculata_contig14561.2733.1|Name=mRNA_H-paniculata_contig14561.2733.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp
MKRSNSRKNITVDAPVTVAGAVMPPVVIFKGQRVQVAWLVTGDNRFPGAT
YIATDSSDVQGMVFVCFFKEFDRYLGASGFKERKYHILVLDGHASHLNLQ
ISLNIELFQLPSNSPHMIQPLDVAAFDTPKKAITSVLQPLSKPWQRNAGE
SGYVGVIGQAWAGRFTVP*
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mRNA from alignment at H-paniculata_contig14561:177..1349-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14561.2733.1 ID=mRNA_H-paniculata_contig14561.2733.1|Name=mRNA_H-paniculata_contig14561.2733.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1173bp|location=Sequence derived from alignment at H-paniculata_contig14561:177..1349- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCGAAGACACCTTCTTGTGGGTCGCGCATCGGAAGTTGGGGGTGGGTAG AGCGGAGCTGATGGAAGGTGTTCGTGTGCTCTACAACGATCATCGTAAGG TGCCATGGGACAGAGAGAAAGACCCCGGCTGCAAGTGACCAGATTTCTTC TTCGCGAGGCACCCTCGTCTGTCGGAGCGCCGCAGCTGCATCTACGAAGC GAACAGGATCACAGCTGACGCTGAACCCCGCCGAGAGCATTCTACACCAG CTGGGCGGAAACGTTGACCAACCTACAGCTGGCGGCGGACCATGTGTTGA GTACCGACAAAATTTGAACCCCATGGTTTCAGATGTCACTGCCCGAGGTC GAAGGTAATTGCACGGAGGGGGCAGAAGGTGGTCGGCATGAAGCGCTCCA ACTCCCGGAAGAACATCACGGTGGACGCCCCTGTGACCGTAGCCGGGGCC GTCATGCCACCCGTCGTCATCTTCAAAGGGCAAAGGGTGCAAGTGGCGTG GCTCGTTACCGGTGACAATCGGTTTCCGGGCGCAACGTACATCGCGACCG ATTCGTCTGATGTGCAGGGAATGGTCTTCGTTTGTTTTTTCAAAGAGTTT GACCGCTACCTCGGTGCTAGTGGCTTCAAGGAGAGAAAGTATCATATTCT TGTCCTTGATGGTCATGCCTCGCACTTGAACCTCCAAGTCGTCGAGTTGT AGATTTCTCTGAATATTGAGCTGTTCCAGCTTCCTTCTAATTCCCCCCAC ATGATCCAGCCATTGGACGTCGCTGCTTTTGACACCCCCAAGAAGGCAAT CACCTCAGTCTTACAACCTTTGAGCAAACCATGGCAGCGGAATGCCGGTG AAAGCGGATATGTCGGGGTTATCGGGCAAGCATGGGCAGGGAGGTTTACA GTACCATAGATGAAGGCGTCGTTCCAGGGGGCAGGGCTGTGGCCAGTGAA TATGCAGCGCGTTCTGGACAAGCTAATAGGCGTCGGGAAGAGGAAGTCCC GAACTGACGACTACCCATTCCTGGCCGACATCCCCGTGGCGATCAGCGAG AATGAGCTCGAACGGTATCTCGGCCTCGGTTTAGTGCGGCAGCTGAAATT TACAAGCTACACGCTTACCGGCATCAGGGTCGGCACAGTCTTCTTCGTCG AATTCCTAAAGACTCAGGAGCGG
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Coding sequence (CDS) from alignment at H-paniculata_contig14561:177..1349-

>mRNA_H-paniculata_contig14561.2733.1 ID=mRNA_H-paniculata_contig14561.2733.1|Name=mRNA_H-paniculata_contig14561.2733.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1014bp|location=Sequence derived from alignment at H-paniculata_contig14561:177..1349- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCGCTCCAACTCCCGGAAGAACATCACGGTGGACGCCCCTGTGAC
CGTAGCCGGGGCCGTCATGCCACCCGTCGTCATCTTCAAAGGGCAAAGGG
TGCAAGTGGCGTGGCTCGTTACCGGTGACAATCGGTTTCCGGGCGCAACG
TACATCGCGACCGATTCGTCTGATGTGCAGGGAATGGTCTTCGTTTGTTT
TTTCAAAGAGTTTGACCGCTACCTCGGTGCTAGTGGCTTCAAGGAGAGAA
AGTATCATATTCTTGTCCTTGATGGTCATGCCTCGCACTTGAACCTCCAA
ATGAAGCGCTCCAACTCCCGGAAGAACATCACGGTGGACGCCCCTGTGAC
CGTAGCCGGGGCCGTCATGCCACCCGTCGTCATCTTCAAAGGGCAAAGGG
TGCAAGTGGCGTGGCTCGTTACCGGTGACAATCGGTTTCCGGGCGCAACG
TACATCGCGACCGATTCGTCTGATGTGCAGGGAATGGTCTTCGTTTGTTT
TTTCAAAGAGTTTGACCGCTACCTCGGTGCTAGTGGCTTCAAGGAGAGAA
AGTATCATATTCTTGTCCTTGATGGTCATGCCTCGCACTTGAACCTCCAA
ATTTCTCTGAATATTGAGCTGTTCCAGCTTCCTTCTAATTCCCCCCACAT
GATCCAGCCATTGGACGTCGCTGCTTTTGACACCCCCAAGAAGGCAATCA
CCTCAGTCTTACAACCTTTGAGCAAACCATGGCAGCGGAATGCCGGTGAA
AGCGGATATGTCGGGGTTATCGGGCAAGCATGGGCAGGGAGGTTTACAGT
ACCATAGATTTCTCTGAATATTGAGCTGTTCCAGCTTCCTTCTAATTCCC
CCCACATGATCCAGCCATTGGACGTCGCTGCTTTTGACACCCCCAAGAAG
GCAATCACCTCAGTCTTACAACCTTTGAGCAAACCATGGCAGCGGAATGC
CGGTGAAAGCGGATATGTCGGGGTTATCGGGCAAGCATGGGCAGGGAGGT
TTACAGTACCATAG
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