mRNA_H-paniculata_contig14405.2652.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14405.2652.1 vs. uniprot
Match: D8LLB6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB6_ECTSI) HSP 1 Score: 199 bits (507), Expect = 4.470e-61 Identity = 92/107 (85.98%), Postives = 103/107 (96.26%), Query Frame = 1 Query: 4 FVFVLAGDVKKINDIAVRAPCTGMLIIGGGVVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGAKPDEAVSWGKIKLEASPVKVYAEATLVLPLLVAQTFAKSFHE 324 F+ ++GDVK+INDIAVRAPCTGM+I+GGGVVKHHVCNANLMRNGADFAVF+NTGQEYDGSDSGA+PDEAVSWGKIKL+A PVK+YAEATLVLPLLVAQTFAK FH+ Sbjct: 266 FILDISGDVKRINDIAVRAPCTGMIIVGGGVVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKIYAEATLVLPLLVAQTFAKDFHD 372
BLAST of mRNA_H-paniculata_contig14405.2652.1 vs. uniprot
Match: UPI0015AC8DD5 (probable deoxyhypusine synthase n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AC8DD5) HSP 1 Score: 167 bits (422), Expect = 1.850e-51 Identity = 76/103 (73.79%), Postives = 92/103 (89.32%), Query Frame = 1 Query: 16 LAGDVKKINDIAVRAPCTGMLIIGGGVVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGAKPDEAVSWGKIKLEASPVKVYAEATLVLPLLVAQTFAKSFHE 324 +A D+++IN +AV+A +GM+IIGGGVVKHH+CN+NLMRNGAD++VFINTG EYDGSDSGA+PDEAVSWGKIK A PVKVYA+ATLV P++VAQTFA FHE Sbjct: 16 IAQDIRRINSMAVKALNSGMIIIGGGVVKHHICNSNLMRNGADYSVFINTGNEYDGSDSGARPDEAVSWGKIKKTAKPVKVYADATLVFPVIVAQTFAAKFHE 118
BLAST of mRNA_H-paniculata_contig14405.2652.1 vs. uniprot
Match: A0A2R5G8G8_9STRA (Deoxyhypusine synthase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8G8_9STRA) HSP 1 Score: 171 bits (433), Expect = 4.350e-50 Identity = 76/107 (71.03%), Postives = 94/107 (87.85%), Query Frame = 1 Query: 4 FVFVLAGDVKKINDIAVRAPCTGMLIIGGGVVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGAKPDEAVSWGKIKLEASPVKVYAEATLVLPLLVAQTFAKSFHE 324 FV + GD++ +ND+A +AP TGM+I+GGG+VKHHVCNANLMRNGADF+VFINT E+DGSDSGA+PDEA+SWGKI+ EA+PVK+Y E TLV PL+VAQTFAK +HE Sbjct: 248 FVLDIVGDIRAVNDLACKAPKTGMVILGGGLVKHHVCNANLMRNGADFSVFINTASEFDGSDSGARPDEAISWGKIRREATPVKLYCEVTLVFPLIVAQTFAKYYHE 354
BLAST of mRNA_H-paniculata_contig14405.2652.1 vs. uniprot
Match: A0A7S4MVC8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MVC8_9EUKA) HSP 1 Score: 167 bits (422), Expect = 4.580e-50 Identity = 74/99 (74.75%), Postives = 93/99 (93.94%), Query Frame = 1 Query: 16 LAGDVKKINDIAVRAPCTGMLIIGGGVVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGAKPDEAVSWGKIKLEASPVKVYAEATLVLPLLVAQTFAK 312 +A D++ IND+AV+A TGMLI GGG+VKHH+CNANLMRNGA +AVF+NTGQE+DGSDSGAKPDEAVSWGK++L+++PVKVYAEAT+++PLLVAQTFA+ Sbjct: 128 IAQDIRYINDLAVKAARTGMLIFGGGLVKHHICNANLMRNGAHYAVFVNTGQEFDGSDSGAKPDEAVSWGKVRLDSTPVKVYAEATIIMPLLVAQTFAR 226
BLAST of mRNA_H-paniculata_contig14405.2652.1 vs. uniprot
Match: A0A087T4C9_STEMI (Putative deoxyhypusine synthase (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087T4C9_STEMI) HSP 1 Score: 165 bits (418), Expect = 4.930e-50 Identity = 75/103 (72.82%), Postives = 92/103 (89.32%), Query Frame = 1 Query: 16 LAGDVKKINDIAVRAPCTGMLIIGGGVVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGAKPDEAVSWGKIKLEASPVKVYAEATLVLPLLVAQTFAKSFHE 324 +A D+++IN +AV+A +GM+IIGGGVVKHH+CN+NLMRNGAD++VFINTG EYDGSDSGA+PDEAVSWGKIK A PVKVYA+ATLV P++VA+TFA FHE Sbjct: 76 IAQDIRRINSMAVKALNSGMIIIGGGVVKHHICNSNLMRNGADYSVFINTGNEYDGSDSGARPDEAVSWGKIKKTAKPVKVYADATLVFPVIVAKTFAAKFHE 178
BLAST of mRNA_H-paniculata_contig14405.2652.1 vs. uniprot
Match: A0A835YZK5_9STRA (DHS-like NAD/FAD-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZK5_9STRA) HSP 1 Score: 171 bits (434), Expect = 6.460e-50 Identity = 76/106 (71.70%), Postives = 94/106 (88.68%), Query Frame = 1 Query: 4 FVFVLAGDVKKINDIAVRAPCTGMLIIGGGVVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGAKPDEAVSWGKIKLEASPVKVYAEATLVLPLLVAQTFAKSFH 321 F+ + GD+K INDIAVRA TGM+++GGGVVKHH CNANLMRNGA+F+VFINTG ++DGSDSGAKPDEA+SWGK+K+++ PVK+ AEATLV PL+VA+TFAK FH Sbjct: 267 FMLDVTGDIKSINDIAVRAHATGMIVLGGGVVKHHTCNANLMRNGAEFSVFINTGSDFDGSDSGAKPDEAISWGKVKIDSRPVKLQAEATLVFPLIVAETFAKDFH 372
BLAST of mRNA_H-paniculata_contig14405.2652.1 vs. uniprot
Match: A0A7S3HQ73_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQ73_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.970e-49 Identity = 73/100 (73.00%), Postives = 89/100 (89.00%), Query Frame = 1 Query: 16 LAGDVKKINDIAVRAPCTGMLIIGGGVVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGAKPDEAVSWGKIKLEASPVKVYAEATLVLPLLVAQTFAKS 315 + D+KKINDIAVRA CTGM+I+GGGVVKHH CNANLMRNGA+++V+INTGQE+DGSDSGA PDEAVSWGKI +EA PVKV +AT++ PL+V+QTF K+ Sbjct: 42 IVHDIKKINDIAVRAHCTGMVILGGGVVKHHTCNANLMRNGAEYSVYINTGQEFDGSDSGASPDEAVSWGKIHIEAKPVKVSCDATVIFPLIVSQTFLKA 141
BLAST of mRNA_H-paniculata_contig14405.2652.1 vs. uniprot
Match: A0A7S3JQE7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQE7_9STRA) HSP 1 Score: 169 bits (427), Expect = 3.950e-49 Identity = 77/105 (73.33%), Postives = 91/105 (86.67%), Query Frame = 1 Query: 4 FVFVLAGDVKKINDIAVRAPCTGMLIIGGGVVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGAKPDEAVSWGKIKLEASPVKVYAEATLVLPLLVAQTFAKSF 318 F+ + DV+ IND+AV A TGM+I+GGG+VKHHVCNANLMRNGADFAVF+NTGQE+DGSDSGA+PDEA+SWGKIK+ A PVKVYA+A+L PLLVA TFAK F Sbjct: 260 FILDIVQDVRAINDLAVHAKATGMIILGGGLVKHHVCNANLMRNGADFAVFLNTGQEFDGSDSGARPDEAISWGKIKMHAKPVKVYADASLAFPLLVAMTFAKDF 364
BLAST of mRNA_H-paniculata_contig14405.2652.1 vs. uniprot
Match: A0A7R8WMB5_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WMB5_9CRUS) HSP 1 Score: 161 bits (407), Expect = 4.050e-49 Identity = 70/100 (70.00%), Postives = 91/100 (91.00%), Query Frame = 1 Query: 25 DVKKINDIAVRAPCTGMLIIGGGVVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGAKPDEAVSWGKIKLEASPVKVYAEATLVLPLLVAQTFAKSFHE 324 D++ +N +AVRA GM+I+GGGVVKHH+CNANLMRNGA+F+VF+NT E+DGSDSGA+PDEA+SWGKI+++A PVKVYAEA+L+ PLLVA+TFA++FHE Sbjct: 19 DLRLLNTMAVRAKNAGMIIVGGGVVKHHICNANLMRNGANFSVFLNTANEFDGSDSGARPDEAISWGKIRMDAQPVKVYAEASLIFPLLVAETFARAFHE 118
BLAST of mRNA_H-paniculata_contig14405.2652.1 vs. uniprot
Match: R7QI88_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI88_CHOCR) HSP 1 Score: 160 bits (405), Expect = 6.770e-49 Identity = 71/103 (68.93%), Postives = 88/103 (85.44%), Query Frame = 1 Query: 4 FVFVLAGDVKKINDIAVRAPCTGMLIIGGGVVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGAKPDEAVSWGKIKLEASPVKVYAEATLVLPLLVAQTFAK 312 F+ L D++++N A+RAPCTGM+I+GGGV+KHH+ NANLMRNGAD+AV++NTGQEYDGSDSGA PDEAVSWGKI++ KV AEATL+ P+LVAQTFAK Sbjct: 12 FIVDLVSDIRRMNQHAIRAPCTGMIILGGGVIKHHIANANLMRNGADYAVYMNTGQEYDGSDSGASPDEAVSWGKIRINGEKTKVMAEATLLFPILVAQTFAK 114 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14405.2652.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14405.2652.1 >prot_H-paniculata_contig14405.2652.1 ID=prot_H-paniculata_contig14405.2652.1|Name=mRNA_H-paniculata_contig14405.2652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp MFVFVLAGDVKKINDIAVRAPCTGMLIIGGGVVKHHVCNANLMRNGADFAback to top mRNA from alignment at H-paniculata_contig14405:3708..5316- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14405.2652.1 ID=mRNA_H-paniculata_contig14405.2652.1|Name=mRNA_H-paniculata_contig14405.2652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1609bp|location=Sequence derived from alignment at H-paniculata_contig14405:3708..5316- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14405:3708..5316- >mRNA_H-paniculata_contig14405.2652.1 ID=mRNA_H-paniculata_contig14405.2652.1|Name=mRNA_H-paniculata_contig14405.2652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at H-paniculata_contig14405:3708..5316- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |