mRNA_H-paniculata_contig14403.2650.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14403.2650.1
Unique NamemRNA_H-paniculata_contig14403.2650.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14403.2650.1 vs. uniprot
Match: D7FR49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR49_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 1.520e-91
Identity = 131/207 (63.29%), Postives = 163/207 (78.74%), Query Frame = 2
Query:  404 RVLVPLCGKTLDMPFLADKGHEVVGVEGCETAAWQLQRDAWLKFQVSQHASQGVASDGQKRFIAAPTFGKKRTGYVFKTDEQGTGYYLDAKPLKWFRDTRKRVSVVIQDFMHVGPRDIGTFDRIWDRGSLVAIRPQDRMDYVAVCDSLLEPGGRILLATYNYDQDRMEGPPHSIPLAEVKRLYG-RHGYTVELLGSEDVCNDHKVSQ 1021
            RVLVPLCGKT+DMP+LA KGHEVVGV+G E A WQLQRD+WLKF+  Q      +S  +  FI APTF K+R+GYVFKTD  GTGYYLD K +KWFRDTRKR+SVV+ DF+ + P DIG FDR+WDRG+LVA+RP+DR +YV+ CDS+LEPGG+ILLAT  YDQ+  +GPP+SIPLAEV+RLYG + GY +E L S D   +++  +
Sbjct:   14 RVLVPLCGKTVDMPYLAQKGHEVVGVDGVEAAVWQLQRDSWLKFETFQAEPSAESSGRRPGFIPAPTFEKRRSGYVFKTDTLGTGYYLDKKAVKWFRDTRKRISVVVSDFLFLAPGDIGMFDRVWDRGALVALRPEDREEYVSTCDSVLEPGGKILLATLVYDQNAKKGPPYSIPLAEVQRLYGGKLGYAIETLSSVDAREEYQTKR 220          
BLAST of mRNA_H-paniculata_contig14403.2650.1 vs. uniprot
Match: A0A835ZBL3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL3_9STRA)

HSP 1 Score: 179 bits (455), Expect = 8.980e-51
Identity = 95/205 (46.34%), Postives = 119/205 (58.05%), Query Frame = 2
Query:  413 VPLCGKTLDMPFLADKGHEVVGVEGCETAAWQLQRDAWLKFQVSQHASQGVASDGQKR-----FIAAPTFGKKRTGYVFKTDEQGTGYYLDAKPLKWFRDTRKRVSVVIQDFMHVGPRDIGTFDRIWDRGSLVAIRPQDRMDYVAVCDSLLEPGGRILLATYNYDQDRMEGPPHSIPLAEVKRLYGRHGYTVELLGSEDVCNDHK 1012
            VPLCGK++D+P+LA +GHE VGVEG E A W LQR+ WL F        G       +     F+ A  FG  R GYVF     G GYY DA PL    + R  + VV+ DF+ V P +IGTFD  WDRGSLVA+ P  R  Y A   +LL  G R+LL T ++DQ    GPP  +  AE++ LYG  G+TVELL S D   ++K
Sbjct:   50 VPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQHDSGDFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLAAVERRLPLRVVVGDFLEVTPAEIGTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRPGPPFVVSHAELEALYGPLGFTVELLSSRDASAEYK 254          
BLAST of mRNA_H-paniculata_contig14403.2650.1 vs. uniprot
Match: A0A8J6CB01_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CB01_DIALT)

HSP 1 Score: 149 bits (377), Expect = 1.220e-38
Identity = 102/289 (35.29%), Postives = 140/289 (48.44%), Query Frame = 2
Query:  257 RMDRWNDRWQRGNISWHRSQPYGILVKHYDQFIGVSGSQAKSDGAHQRYRVLVPLCGKTLDMPFLADKGHEVVGVEGCETAAWQLQRDA--WLKFQVSQHASQGVASDGQKRFIAAPTFGKKRTGYVFKTDEQGTGYYLD--------------AKPLK---------WF------------RDTRKRVSVVIQDFMHVGPRDIGTFDRIWDRGSLVAIRPQDRMDYVAVCDSLLEPGGRILLATYNYDQDRMEGPPHSIPLAEVKRLYGRHGYTVELLGSEDVCNDHK 1012
            R+ RW D+W+  +I +H+   +  LV H    IG     A    A   +RVLVPLCGKT+DMPFLA  GHEVVGVEG   AA    +D       + +  A  G A+     FIAA  F   R GYVF T +   GY+ D              A P +         W             +  R  V + I D+  V   +IG+F R WDRG LVA+ P  R  Y +  D+LLEP  R+LL+ ++YDQ    GPP ++ + +V+ L+ R  Y+V +L   D   + +
Sbjct:   36 RLARWADKWEANDIKFHKRDVHPTLVAH----IG-----ALFPDAPAAHRVLVPLCGKTVDMPFLARAGHEVVGVEGVPLAAEAFSKDQPHLRMVRCAPGAPAGAAAPAD--FIAADAFAGPRAGYVFTTRDGKLGYHRDRPQPTPAAAATQPAAAPAQRAALGERADWLSTGGTAAARADQQAQRGTVWLAIADWFDVRRDEIGSFGRAWDRGGLVAVPPAARPAYASALDALLEPRARVLLSCFDYDQQVAPGPPFALAVDDVRALFPR--YSVRVLARTDASAEFR 311          
BLAST of mRNA_H-paniculata_contig14403.2650.1 vs. uniprot
Match: A0A1Y1I6T1_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I6T1_KLENI)

HSP 1 Score: 140 bits (353), Expect = 6.540e-36
Identity = 90/258 (34.88%), Postives = 130/258 (50.39%), Query Frame = 2
Query:  251 ENRMDRWNDRWQR-----GNISWHRSQPYGILVKHYDQFIGVSGSQAKSDGAHQRYRVLVPLCGKTLDMPFLADKGHEVVGVEGCETAAWQLQRDAWLKFQVSQHASQGVASDGQKRFIAAPTFGKKRTGYVFKTDEQGTGYYLDAKPLKWFRDTRKRVSVVIQDFMHVGPRDIGTFDRIWDRGSLVAIRPQDRMDYVAVCDSLLEPGGRILLATYNYDQDRMEGPPHSIPLAEVKRLYGRHGYTVELLGSEDVCNDH 1009
            + R+ RW   W +     G I++H++ P   L+K+ ++F+G          A +  RVLVPLCGKT+DMPFL+ KG +VVGVEG +TA  + + +                          P    +R   + +T E G   Y               +S++  DF  +     GTFD   DR +LVA+ P  R  YVA  D +L+PG RILL   NY+Q+ M GPP+SI + EV RL+G +GY  +LL + DV  D+
Sbjct:   40 QERLTRWVAGWAKPRDAPGRIAFHKADPNPNLLKNLEKFLG------PEQEAGENRRVLVPLCGKTVDMPFLSSKGLDVVGVEGIQTAIDEFREEH-------------------------PDIPLER---LDRTSEGGFEVYAGPG-----------LSILRGDFFELTSASAGTFDLCLDRAALVAVHPSLRGKYVAALDGVLKPGARILLVGMNYNQEEMSGPPYSIDIKEVDRLFG-NGYDAQLLTANDVLKDY 251          
BLAST of mRNA_H-paniculata_contig14403.2650.1 vs. uniprot
Match: A0A7M7GGJ0_STRPU (Thiopurine S-methyltransferase n=3 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7GGJ0_STRPU)

HSP 1 Score: 132 bits (331), Expect = 7.850e-33
Identity = 85/274 (31.02%), Postives = 130/274 (47.45%), Query Frame = 2
Query:  197 ITACSVATAACVAVALSEENRMDRWNDRWQRGNISWHRSQPYGILVKHYDQFIGVSGSQAKSDGAHQRYRVLVPLCGKTLDMPFLADKGHEVVGVEGCETAAWQLQRDAWLKFQVSQHASQGVASDGQKRFIAAPTFGKKRTGYVFKTDEQGTGYYLDAKPLKWFRDTRKRVSVVIQDFMHVGPRDIGTFDRIWDRGSLVAIRPQDRMDYVAVCDSLLEPGGRILLATYNYDQD--RMEGPPHSIPLAEVKRLYGRHGYTVELLGSEDVCNDHK 1012
            +T C +++ +CV ++     R+  W + W  G  S+H +  +  L++   + +    S           RVLVPLCGKTLDM +LA++GHEVVGVEG   A  +   +  L ++ S                                D  G       K  K F +  K++ + + DF        G FD IWDR SLVAI P  R  Y  V  S+L PGGRIL+  Y Y+ +  + +G PH +P   +++LYG   ++++LL +ED+   +K
Sbjct:   21 LTVCDISSFSCVKMS-----RIQTWTEGWAEGRTSFHGTNVHKSLLEFQSKLLVKKPS-----------RVLVPLCGKTLDMRWLAEEGHEVVGVEGVIQAVMEFFEEQELPYKES--------------------------------DVPGI------KGAKLFENEDKKIKIYLCDFFQFSKDIAGQFDAIWDRASLVAIDPPLRQQYTDVLLSVLSPGGRILIEVYEYNPEERKQKGTPHFVPEEVIQKLYGER-FSIQLLATEDILEQNK 239          
BLAST of mRNA_H-paniculata_contig14403.2650.1 vs. uniprot
Match: UPI001BB0EF63 (probable thiopurine S-methyltransferase n=3 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB0EF63)

HSP 1 Score: 130 bits (328), Expect = 8.560e-33
Identity = 82/256 (32.03%), Postives = 126/256 (49.22%), Query Frame = 2
Query:  257 RMDRWNDRWQRGNISWHRSQPYGILVKHYDQFIGVSGSQAKSDGAHQRYRVLVPLCGKTLDMPFLADKGHEVVGVEGCETAAWQLQRDAWLKFQVSQHASQGVASDGQKRFIAAPTFGKKRTGYVFKTDEQGTGYYLDAKPLKWFRDTRKRVSVVIQDFMHVGPRDIGTFDRIWDRGSLVAIRPQDRMDYVAVCDSLLEPGGRILLATYNYD-QDRMEGPPHSIPLAEVKRLYGRHGYTVELLGSEDVCNDHKVSQ 1021
            +++ W++ W +G  S+HR+  +  L++   +F+    S           RVLVPLCGKTLDM +LA++GHEVVGVEG   A  +  ++  L ++ S     G+  DG                                   K F +  K++ + + DF        G FD IWDRGSLVA+ P  +  Y  V  S+L PGGRIL   + Y  +++ +GPP+S+P   +++LYG   +++ELL   +  N H   Q
Sbjct:    3 KLEEWSEGWSKGRTSFHRTFVHKSLLEFQSKFLVKKPS-----------RVLVPLCGKTLDMRWLAEEGHEVVGVEGVLQAVMEFFQEQDLSYKESDIP--GI-KDG-----------------------------------KLFENEDKKIKIYLCDFFKFSKDFAGQFDAIWDRGSLVAVDPSSQQQYTDVLLSVLSPGGRILNEVFEYSLEEKPKGPPNSLPDEVIQKLYGEK-FSIELLADNNHMNQHFKDQ 208          
BLAST of mRNA_H-paniculata_contig14403.2650.1 vs. uniprot
Match: A0A7M7PA33_STRPU (Thiopurine S-methyltransferase n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PA33_STRPU)

HSP 1 Score: 128 bits (322), Expect = 7.010e-32
Identity = 80/255 (31.37%), Postives = 123/255 (48.24%), Query Frame = 2
Query:  254 NRMDRWNDRWQRGNISWHRSQPYGILVKHYDQFIGVSGSQAKSDGAHQRYRVLVPLCGKTLDMPFLADKGHEVVGVEGCETAAWQLQRDAWLKFQVSQHASQGVASDGQKRFIAAPTFGKKRTGYVFKTDEQGTGYYLDAKPLKWFRDTRKRVSVVIQDFMHVGPRDIGTFDRIWDRGSLVAIRPQDRMDYVAVCDSLLEPGGRILLATYNYDQDRME--GPPHSIPLAEVKRLYGRHGYTVELLGSEDVCNDHK 1012
            +R++RW++ W  G  S+HR+  +  L++   + +    S           RVLVPLCGKTLDM + A++GHEVVGVEG   A  +  ++  L ++ S                                D  G       K  K F +  K++ + + DF        G FD IWDRGSLVAI P  R  Y  +  S+L PGGRIL   + Y+ +  E  GPPH +P   +++L+G   ++++LL + D+   ++
Sbjct:    2 SRLERWSEGWAEGRTSFHRTYVHKSLLEFQSKLLVKKPS-----------RVLVPLCGKTLDMRWFAEEGHEVVGVEGVLQAVMEFFQEQELPYKES--------------------------------DVPGL------KGAKLFENEDKKIKIYLCDFFQFSKDFAGQFDAIWDRGSLVAIDPSLRQQYTDLLLSVLSPGGRILNEVFEYNPEEREPKGPPHCVPEEVIQKLFGER-FSIQLLANVDILEHNQ 206          
BLAST of mRNA_H-paniculata_contig14403.2650.1 vs. uniprot
Match: A0A813IMN0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IMN0_POLGL)

HSP 1 Score: 125 bits (315), Expect = 7.540e-30
Identity = 84/259 (32.43%), Postives = 126/259 (48.65%), Query Frame = 2
Query:  233 AVALSEENRMDRWNDRWQRGNISWHRSQPYGILVKHYDQFIGVSGSQAKSDGAHQRYRVLVPLCGKTLDMPFLADKGHEVVGVEGCETAAWQLQRDAWLKFQVSQHASQGVASDGQKRFIAAPTFGKKRTGYVFKTDEQGTGYYLDAKPLKWFRDTRKRVSVVIQDFMHVGP---RDIGTFDRIWDRGSLVAIRPQDRMDYVAVCDSLLEPGGRILLATYNYDQ--DRMEGPPHSIPLAEVKRLYGRHGYTVELLGSED 994
            AVA++E +RM+RW DRW  G  +WH       +VK++ + +      +   G     RVLVPLCGK +DM FLA  G+ VVGVEG   A  Q  +   +   +++ A+  V    +      P   +     +   +E                     V +V  DF+ +GP   + +  FD  +DRGSLVA++P +R+ Y  V  +L+ PGG++LL    +D   D   GPP  +  AEV  L+G   + V+LL  ED
Sbjct:   59 AVAVAEPDRMNRWRDRWAAGLATWHLEDVNPYIVKYWGEVMPAPAPASNGMGV----RVLVPLCGKCVDMAFLARLGYRVVGVEGVGEAIEQFAKQYGMPIPMAEGATMHVNFPPE----VDPARFRGHAAIISAGEEXXXXXXXXXX-----------VILVEGDFLELGPEAAKALVPFDAAFDRGSLVAVQPSERVRYAEVLSNLMAPGGKVLLVAVEHDAFADGRLGPPFEVTEAEVASLFGST-FAVKLLQRED 297          
BLAST of mRNA_H-paniculata_contig14403.2650.1 vs. uniprot
Match: UPI000359AE63 (thiopurine S-methyltransferase n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359AE63)

HSP 1 Score: 122 bits (307), Expect = 1.210e-29
Identity = 76/228 (33.33%), Postives = 106/228 (46.49%), Query Frame = 2
Query:  245 SEENRMDRWNDRWQRGNISWHRSQPYGILVKHYDQFIGVSGSQAKSDGAHQRYRVLVPLCGKTLDMPFLADKGHEVVGVEGCETAAWQLQRDAWLKFQVSQHASQGVASDGQKRFIAAPTFGKKRTGYVFKTDEQGTGYYLDAKPLKWFRDTRKRVSVVIQDFMHVGPRDIGTFDRIWDRGSLVAIRPQDRMDYVAVCDSLLEPGGRILLATYNYDQDRMEGPPHSIP 928
            S+ NR+D W  RW  G +++H+ +   +L KH+D+ + + G            R+ VPLCGKTLDM +LADKG EVVG++G   +  Q   D  L++                                 K  + G    L       F   + R+ +   D M+  P   GTFD IWDR SLVA+   D   YV +  SLL+PGGR LL   ++D +  E   HSIP
Sbjct:    3 SQRNRVDYWQKRWDAGIVTFHKQEVNPLLEKHFDKLL-LGGKNE---------RIFVPLCGKTLDMKWLADKGVEVVGLDGVPLSLEQFFSDQNLEYTSK------------------------------KIPQLGDNCQL-------FESAQDRIRLYCGDMMNFSPSVAGTFDAIWDRASLVALNRNDVPKYVEIIKSLLKPGGRCLLEVVDFDVNNKEDAAHSIP 183          
BLAST of mRNA_H-paniculata_contig14403.2650.1 vs. uniprot
Match: UPI0003F08D4A (thiopurine S-methyltransferase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F08D4A)

HSP 1 Score: 124 bits (310), Expect = 1.710e-29
Identity = 80/245 (32.65%), Postives = 115/245 (46.94%), Query Frame = 2
Query:  260 MDRWNDRWQRGNISWHRSQPYGILVKHYDQFIGVSGSQAKSDGAHQRYRVLVPLCGKTLDMPFLADKGHEVVGVEGCETAAWQLQRDAWLKFQVSQHASQGVASDGQKRFIAAPTFGKKRTGYVFKTDEQGTGYYLDAKPLKWFRDTRKRVSVVIQDFMHVGPRDIGTFDRIWDRGSLVAIRPQDRMDYVAVCDSLLEPGGRILLATYNYDQDRMEGPPHSIPLAEVKRLYGRHGYTVELLGSED 994
            ++ W  RW++G   +H  + + IL KHY           K +   ++ R  +PLCGK+LD+ +L DKGH VVG E                           +++G K+F     F +    Y  +  E  +G    AK L         V++   DF  + P  IGTFD +WDRGSL AI P+DR  Y  V   LL+  GR LL  +  D +   GPPH+ P  E++ L G+H   VEL+ + D
Sbjct:   57 VETWRKRWRKGQTKFHLEKVHPILQKHYSWL-------TKEE---EKQRFFLPLCGKSLDLKWLVDKGHVVVGNE--------------------------CSAEGVKQF-----FDEHDLEYTVEPIEDISGDIHQAKNLD--------VTIYCCDFFLITPEIIGTFDAVWDRGSLAAIHPEDRKKYADVFFPLLKKDGRCLLDLFQVDHEHFAGPPHTFPPEELQTLLGKH-LQVELVNTRD 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14403.2650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR49_ECTSI1.520e-9163.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZBL3_9STRA8.980e-5146.34S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A8J6CB01_DIALT1.220e-3835.29Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A1Y1I6T1_KLENI6.540e-3634.88Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A7M7GGJ0_STRPU7.850e-3331.02Thiopurine S-methyltransferase n=3 Tax=Strongyloce... [more]
UPI001BB0EF638.560e-3332.03probable thiopurine S-methyltransferase n=3 Tax=Ly... [more]
A0A7M7PA33_STRPU7.010e-3231.37Thiopurine S-methyltransferase n=1 Tax=Strongyloce... [more]
A0A813IMN0_POLGL7.540e-3032.43Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
UPI000359AE631.210e-2933.33thiopurine S-methyltransferase n=1 Tax=Aplysia cal... [more]
UPI0003F08D4A1.710e-2932.65thiopurine S-methyltransferase-like n=1 Tax=Saccog... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14403contigH-paniculata_contig14403:1307..4740 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score125.6
Seed ortholog evalue4.4e-26
Seed eggNOG ortholog10224.XP_006825177.1
KEGG rclassRC00003,RC00980,RC02277
KEGG koko:K00569
KEGG ReactionR08236,R08239,R08246
KEGG Pathwayko00983,map00983
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.Thiopurine S-methyltransferase
EggNOG OGs2CMWS@1,2QSF5@2759,38HDT@33154,3B9J5@33208,3CVW2@33213
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-09_003500.1
EC2.1.1.67
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons5
Model size1021
Cds size990
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14403.2650.1prot_H-paniculata_contig14403.2650.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14403 1307..4709 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929146.9019632-CDS-H-paniculata_contig14403:1306..14191622929146.9019632-CDS-H-paniculata_contig14403:1306..1419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14403 1307..1419 -
1691480749.2893891-CDS-H-paniculata_contig14403:1306..14191691480749.2893891-CDS-H-paniculata_contig14403:1306..1419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14403 1307..1419 -
1622929146.9199076-CDS-H-paniculata_contig14403:1697..18341622929146.9199076-CDS-H-paniculata_contig14403:1697..1834Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14403 1698..1834 -
1691480749.3012946-CDS-H-paniculata_contig14403:1697..18341691480749.3012946-CDS-H-paniculata_contig14403:1697..1834Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14403 1698..1834 -
1622929146.9352503-CDS-H-paniculata_contig14403:2552..26381622929146.9352503-CDS-H-paniculata_contig14403:2552..2638Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14403 2553..2638 -
1691480749.3114078-CDS-H-paniculata_contig14403:2552..26381691480749.3114078-CDS-H-paniculata_contig14403:2552..2638Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14403 2553..2638 -
1622929146.951612-CDS-H-paniculata_contig14403:3060..34471622929146.951612-CDS-H-paniculata_contig14403:3060..3447Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14403 3061..3447 -
1691480749.320565-CDS-H-paniculata_contig14403:3060..34471691480749.320565-CDS-H-paniculata_contig14403:3060..3447Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14403 3061..3447 -
1622929146.9685884-CDS-H-paniculata_contig14403:4442..47091622929146.9685884-CDS-H-paniculata_contig14403:4442..4709Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14403 4443..4709 -
1691480749.3289576-CDS-H-paniculata_contig14403:4442..47091691480749.3289576-CDS-H-paniculata_contig14403:4442..4709Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14403 4443..4709 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929146.9799817-UTR-H-paniculata_contig14403:4709..47401622929146.9799817-UTR-H-paniculata_contig14403:4709..4740Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14403 4710..4740 -
1691480749.3451097-UTR-H-paniculata_contig14403:4709..47401691480749.3451097-UTR-H-paniculata_contig14403:4709..4740Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14403 4710..4740 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14403.2650.1

>prot_H-paniculata_contig14403.2650.1 ID=prot_H-paniculata_contig14403.2650.1|Name=mRNA_H-paniculata_contig14403.2650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=330bp
MLLNTPCRILKPCTPMLPHRLLSRFSQTSSRLRSVAAAAPENSTTNCPMV
LAVTTITACSVATAACVAVALSEENRMDRWNDRWQRGNISWHRSQPYGIL
VKHYDQFIGVSGSQAKSDGAHQRYRVLVPLCGKTLDMPFLADKGHEVVGV
EGCETAAWQLQRDAWLKFQVSQHASQGVASDGQKRFIAAPTFGKKRTGYV
FKTDEQGTGYYLDAKPLKWFRDTRKRVSVVIQDFMHVGPRDIGTFDRIWD
RGSLVAIRPQDRMDYVAVCDSLLEPGGRILLATYNYDQDRMEGPPHSIPL
AEVKRLYGRHGYTVELLGSEDVCNDHKVSQ
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mRNA from alignment at H-paniculata_contig14403:1307..4740-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14403.2650.1 ID=mRNA_H-paniculata_contig14403.2650.1|Name=mRNA_H-paniculata_contig14403.2650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3434bp|location=Sequence derived from alignment at H-paniculata_contig14403:1307..4740- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACGTAAGATATCAGAGCGCAGCTGTCGACGATGCTCTTGAATACCCCAT GCCGGATTTTGAAGCCATGTACTCCGATGTTACCACATCGCTTGCTCTCA AGGTTCTCCCAAACATCTTCCCGGTTGAGAAGCGTTGCTGCTGCTGCACC TGAGAATTCCACAACAAATTGCCCGATGGTGCTAGCAGTGACAACAATCA CGGCATGCTCGGTCGCCACTGCTGCATGTGTTGCTGTCGCGCTGAGCGAA GAAAACAGGATGGACAGATGGAATGACAGGTGGCAAAGAGGCAACATCGT GAGTCTAGTTGTTCTAAAGAAAGAAAGAAGTTATTGCTCGAACGGACTTG AGGAAGATAGACGGTAGGGTGACTACTGTAGACTATTGACTGATGTTTGG AGCTGACTCGGCATCAGTAATTAGAGTATTTGTCTCTGTGTATGGTACTG ACTGTCCGCCTGCTACAAGTAGTGTACTCGACTGACTCTTGCGTGTGTAC TAACGGTGCTGAGGCTCGTTTGTGCTAGGGCCGGCAGTTGTACCATGTTG TCTGGGACCATTCCTTACTAGAATTTATGGTCTGGGGTGTAGAGCTCTCG TATTTGGGCGACAAGCATGATTCTCATAGATTAAGGGTCGGGTCGTTCGA GCGCGCGACCTTGTCGTGTTGCTGGCATGCAACAGCTGATTTGTTTTTAT TGTCACAGTTTGTCAGGTTTAAAACTTTGAAATTCAAAATCGCGCCCAGA ACGTGATCCCTTCGCCAGTTAGATTGGTTCCCCCATCGATCATCACGACA ACAAATTATGAGCTCTATCGGTCACTAGTTGGAAAGATAGCCTGCCCGAC GAGGAAATCCATAGTAATATTGCTGTAGACTTTGTAGCAATAGGCAGGAT GATGCTCACCTGTGTTGATCAACAGGGGGATGTTATTCGGGGCGGTCGCG TGCAATGCCATCTGTACAGCGTGAGGCGCTGGTTAATATTGCCTGGCTAA GAGCTGAGGCCTCCCGCATTTTTCCTGGTCTTTGTATACTGTCTGCTTTG GAGCCCCAAGCAACGCTCAGCTCTCCGTTCCGTCCCTCTGTATCGACTTA TACCTGGCCTATTCGTGGGACCCTATCCGCAAAAGTAAGTTAAATGGGGG GAGGTTGCTTCGCATTGCCCACACCGATCGCACACCATAGCGACGCCTGG GCAACATTTGAAAAAAATGCACACCTTATTTCGTATGCTGGCGCTTTTCT GATTCATGTTCCGTCTGCTCCACCGTCCTTCACCTCTCCACAGTCGTGGC ATCGTTCGCAGCCATACGGCATCCTGGTGAAGCACTACGATCAGTTCATA GGTGTTTCGGGCAGCCAAGCAAAATCGGACGGGGCTCACCAACGTTATCG GGTGCTCGTTCCTCTATGCGGTAAAACGTTGGATATGCCTTTCCTAGCCG ACAAAGGACACGAGGTCGTCGGAGTAGAAGGATGCGAAACGGCTGCCTGG CAATTGCAGAGAGATGCTTGGCTCAAGTTTCAGGTTTCCCAGCATGCTTC TCAAGGCGTTGCGTCAGACGGCCAGAAAAGGTTCATCGCGGCACCCACCT TTGGCAAAAAACGAACGGGTTATGTTTTCAAAACGGATGAACAAGGGACC GGATACTACCTGGATGCCAAGCCGCTCAAGGTGACGCCGGTTGAGGAGTA CTCTCAAGTATACATTACAAGAAATAGAAGTGGTACATACGGCTGTCGTC TGATCATTGCAAGTTAATGTTGGGCATTGCCCTAAGAAACGTTTTATCCT TTGTGATCGCCCTGGGTGCGACGTGAAATTCGCGGTGCGACAACAACGTG AGGGGTGCCAAGCAAAACACTCTCTCGTGACAGTCCGCACTGTGCGATAT CAATGAGGGGGGCGGTAACGAAGGATATTATTATATGCCGTTGGCCGTAG CATGGAGACTCGACGCCCGTTTCGCGCGTCTGAGCATACTGGTACTGTAC TAAAAAAACAAGGAATGTGCCAACGCGTGTCTATTATAGATAATCGGGTA TGCACCTTACAAAGCCAACGCCATTTTCTCCAACGTCCCCTCGTGCGTGT AGTGGTTCCGAGACACGCGCAAGCGTGTGTCAGTGGTTATCCAAGACTTT ATGCACGTGGGCCCGCGGGACATTGGGACATTTGACAGGTGAGAGTCCCC CATGACTCCGCCGTTGAAAAAGTACAGCCGAAAGAGTGTTCAGAATTACC AAGGAACAGTGTGTACTAGAAGTTTAGGATGTCTTTTTTTCTTTAGGATA AAACGTGTTATGATATTTCCCGATATTACGTGCCGCATCAAGCATGACCC CAACAAAGTCGGTAAAAAAAGTACATGGCATCAGCATTCGTTGGGTGTTG ATGTCTTTCATGTTGGATTCTCTGCTCCCGAGATATGAGCATTCAAAGCA ACAATCTAGTAGCCGTTCACGCTTCTCCTTGGTTTTGCTGTTTTGCCCTC TAGCTTGAGATTCCCTGATCCCAATTTTATCGAAAATAAACACCTTCTAT TACTAAAAGATAATAATATTTCTAGCTCATTTGGATTTGTGGGTGGGATA TATTGCGTAAATTATAACGAAACTGTTTTCATCCTGAAGAAAAAACTCAT CCTGAACTTATGGTACAGGCTGTCAAGTCCAGGTTCAAACTGCGGCTTTC AGATGAAATACCGGGCTCTGCGTGCGCGATAGATACCGCGCTTGGATAAC AAGTTCACAAAGCAGTCAAAGCTGGTGTGGAGTGGGATTTTTTGCGAAGG GTACATACAAACAGATGGGCGTCACAGACAGATGAATGCCATTCTCAAGC GGGCATTACTGTATTCGCGTTTGCTCCAACCGTCTCGTTGCTGTTCAAAC TGGCAGAATTTGGGACCGTGGGAGCCTCGTAGCAATACGCCCGCAAGATC GGATGGATTATGTGGCTGTCTGTGACAGCTTGCTGGAACCTGGTGGGCGA ATCCTCCTCGCAACATATAATTACGACCAAGATAGAATGGAGGGTGGGTC ATCCGAAAGACATGGATCGATGTAGGCACTTACGGTCAAGATTATTCAAT ATCATTGTTCCAGTGCAATAGTCTAATGCAAGAAGCCGTTAATGAGCATG TTCGCGTAATGTGGTCGAGTTCGGAGGTGTGATGGAAAACATATCTTCTC AAGGCGCGGTACTGTCACCTCGTTTGTCTTTCTCGGTACACACCGAACTT GAGACGTACACTGAAACTTGCACATTGCCACCTCTAAAAATACTACTCAA CATTTTTCACCTCCCGAACAGGTCCGCCGCACTCGATTCCCTTAGCTGAA GTAAAGCGGTTATACGGCAGGCACGGATACACTGTCGAACTACTGGGCTC TGAGGATGTCTGCAACGACCACAAGGTCAGTCAA
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Coding sequence (CDS) from alignment at H-paniculata_contig14403:1307..4740-

>mRNA_H-paniculata_contig14403.2650.1 ID=mRNA_H-paniculata_contig14403.2650.1|Name=mRNA_H-paniculata_contig14403.2650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1980bp|location=Sequence derived from alignment at H-paniculata_contig14403:1307..4740- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCTTGAATACCCCATGCCGGATTTTGAAGCCATGTACTCCGATGTT
ACCACATCGCTTGCTCTCAAGGTTCTCCCAAACATCTTCCCGGTTGAGAA
GCGTTGCTGCTGCTGCACCTGAGAATTCCACAACAAATTGCCCGATGGTG
CTAGCAGTGACAACAATCACGGCATGCTCGGTCGCCACTGCTGCATGTGT
TGCTGTCGCGCTGAGCGAAGAAAACAGGATGGACAGATGGAATGACAGGT
GGCAAAGAGGCAACATCATGCTCTTGAATACCCCATGCCGGATTTTGAAG
CCATGTACTCCGATGTTACCACATCGCTTGCTCTCAAGGTTCTCCCAAAC
ATCTTCCCGGTTGAGAAGCGTTGCTGCTGCTGCACCTGAGAATTCCACAA
CAAATTGCCCGATGGTGCTAGCAGTGACAACAATCACGGCATGCTCGGTC
GCCACTGCTGCATGTGTTGCTGTCGCGCTGAGCGAAGAAAACAGGATGGA
CAGATGGAATGACAGGTGGCAAAGAGGCAACATCTCGTGGCATCGTTCGC
AGCCATACGGCATCCTGGTGAAGCACTACGATCAGTTCATAGGTGTTTCG
GGCAGCCAAGCAAAATCGGACGGGGCTCACCAACGTTATCGGGTGCTCGT
TCCTCTATGCGGTAAAACGTTGGATATGCCTTTCCTAGCCGACAAAGGAC
ACGAGGTCGTCGGAGTAGAAGGATGCGAAACGGCTGCCTGGCAATTGCAG
AGAGATGCTTGGCTCAAGTTTCAGGTTTCCCAGCATGCTTCTCAAGGCGT
TGCGTCAGACGGCCAGAAAAGGTTCATCGCGGCACCCACCTTTGGCAAAA
AACGAACGGGTTATGTTTTCAAAACGGATGAACAAGGGACCGGATACTAC
CTGGATGCCAAGCCGCTCAAGTCGTGGCATCGTTCGCAGCCATACGGCAT
CCTGGTGAAGCACTACGATCAGTTCATAGGTGTTTCGGGCAGCCAAGCAA
AATCGGACGGGGCTCACCAACGTTATCGGGTGCTCGTTCCTCTATGCGGT
AAAACGTTGGATATGCCTTTCCTAGCCGACAAAGGACACGAGGTCGTCGG
AGTAGAAGGATGCGAAACGGCTGCCTGGCAATTGCAGAGAGATGCTTGGC
TCAAGTTTCAGGTTTCCCAGCATGCTTCTCAAGGCGTTGCGTCAGACGGC
CAGAAAAGGTTCATCGCGGCACCCACCTTTGGCAAAAAACGAACGGGTTA
TGTTTTCAAAACGGATGAACAAGGGACCGGATACTACCTGGATGCCAAGC
CGCTCAAGTGGTTCCGAGACACGCGCAAGCGTGTGTCAGTGGTTATCCAA
GACTTTATGCACGTGGGCCCGCGGGACATTGGGACATTTGACAGTGGTTC
CGAGACACGCGCAAGCGTGTGTCAGTGGTTATCCAAGACTTTATGCACGT
GGGCCCGCGGGACATTGGGACATTTGACAGAATTTGGGACCGTGGGAGCC
TCGTAGCAATACGCCCGCAAGATCGGATGGATTATGTGGCTGTCTGTGAC
AGCTTGCTGGAACCTGGTGGGCGAATCCTCCTCGCAACATATAATTACGA
CCAAGATAGAATGGAGGAATTTGGGACCGTGGGAGCCTCGTAGCAATACG
CCCGCAAGATCGGATGGATTATGTGGCTGTCTGTGACAGCTTGCTGGAAC
CTGGTGGGCGAATCCTCCTCGCAACATATAATTACGACCAAGATAGAATG
GAGGGTCCGCCGCACTCGATTCCCTTAGCTGAAGTAAAGCGGTTATACGG
CAGGCACGGATACACTGTCGAACTACTGGGCTCTGAGGATGTCTGCAACG
ACCACAAGGTCAGTCAAGTCCGCCGCACTCGATTCCCTTAGCTGAAGTAA
AGCGGTTATACGGCAGGCACGGATACACTGTCGAACTACTGGGCTCTGAG
GATGTCTGCAACGACCACAAGGTCAGTCAA
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