mRNA_H-paniculata_contig1439.2637.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1439.2637.1
Unique NamemRNA_H-paniculata_contig1439.2637.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: D7FKW1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW1_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 7.890e-128
Identity = 199/252 (78.97%), Postives = 232/252 (92.06%), Query Frame = 1
Query:   61 MSINTSASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVYV 816
            MS+N+ AS  DPFYAVRDE+SAKIEYIKVRLER+QDLLNNTNT +NRDFQ+LRKGL+KEVKGADAQL+DLRRTVEYV+NNR+SF HID+AEL ERKTFLS+SKQVLL A D+LDG+QT +K+A D++SE++KYRSKG L A+TE+ERDNTEHILD Q+RVRM LARQD+DLEELGTHV+RVGETA +INEELRSQNR+L ALDDD+DEATE MNFVMGRLGKLLKTKSKC IWT+L+LS +LIILV +L+YV
Sbjct:    1 MSLNSVAS-HDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIYV 251          
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S2S2M2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M2_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.280e-60
Identity = 117/245 (47.76%), Postives = 166/245 (67.76%), Query Frame = 1
Query:   79 ASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813
            A+ QDPFY V+DEL+AK+  I+ RL+ ++ LL  T+T  N+DF++ +K L +++K A+ QLKDL  TVE+V  +R  F HID  +L +R T+++E+KQ L + +    G    +KLADD + ++ K  +   L A +    +NT  I  QQA+ RM + +QD+DLEELG  VDRV + A+ IN EL++QNRML  L+ DLDEATE+MNFVMG+L KLLKTK  C IWTV++L       +FLL+Y
Sbjct:    2 AAAQDPFYVVKDELTAKVHTIQKRLQTFKRLLETTDTATNQDFKDSKKALGRDLKAAEKQLKDLTLTVEFVQKDRAQFAHIDDYDLQQRTTYIAETKQALGEIKAYYSGDDVKRKLADDMRKDIMKQPT-SNLGATSSDAMENTHFIQGQQAQQRMIMEQQDEDLEELGYAVDRVNDMAVGINTELKTQNRMLKDLESDLDEATEKMNFVMGKLAKLLKTKDTCQIWTVIILFFXXXXXIFLLIY 245          
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S3K6G0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6G0_9STRA)

HSP 1 Score: 192 bits (489), Expect = 2.150e-55
Identity = 111/230 (48.26%), Postives = 159/230 (69.13%), Query Frame = 1
Query:   76 SASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTV 765
            SA++ DPFY V+DEL  K+E I  RLERY++LL   NT  + +F+E++KGLS+EVK A+AQ+KDL  TVEYV+ +R +F HID  EL ERK F++ +K  L  ARD L G +   K+  DE+ +L+  R  G   AKT++E  NT+ I +Q A+ R  +  QD++LE L + VDRV   A  I+ EL++Q+R++  L++++DE TE+MNFVMG+L KLLKTK  C + T+
Sbjct:   14 SAASHDPFYVVKDELVNKLESISSRLERYENLLWKINTAASVEFKEVKKGLSREVKAAEAQIKDLALTVEYVEKDRNAFAHIDDRELDERKKFIATTKNKLSGARDVLTGPKARAKIEADEKQQLAATR--GNYGAKTDIEMANTDFIHNQHAQTRTIMQEQDENLEHLDSAVDRVHRMATEIHGELKTQSRLIGDLENEMDETTEKMNFVMGKLAKLLKTKDTCQLLTI 241          
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S2FMQ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMQ2_9STRA)

HSP 1 Score: 188 bits (478), Expect = 6.480e-54
Identity = 105/245 (42.86%), Postives = 168/245 (68.57%), Query Frame = 1
Query:   79 ASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813
            A++ DPFY V+DELS KI+ I  +  ++ +LL++TNT ++ +F++ R+ L K++K A+ QL+DL  TV+ V  +RE F HID  EL +R  ++ ++++ L + + +  G +  +K+  DE++E+   +   +L A    E +NT+ I +QQA+ +M + +QD++LEELG  VDRV + A+ INEEL+ QN+ML  L++D+DEA E+MNFVMG++ KLLKTK  C IWTV++L       VFL++Y
Sbjct:    2 AASVDPFYVVKDELSMKIDAITGKTVKFLELLDSTNTAKSPEFKDARRSLGKDLKSAEKQLRDLTFTVDMVQKDREQFAHIDDYELEQRDAYIKKARKNLNEMKSTYQGERVKRKMIADERAEIES-KPMSSLGATNSDEAENTQFIHEQQAQGQMIIRQQDEELEELGYAVDRVNDMAVGINEELKVQNQMLKTLEEDIDEAAEKMNFVMGKMAKLLKTKDTCQIWTVIILVXXXXXXVFLVIY 245          
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: F0XYP6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYP6_AURAN)

HSP 1 Score: 177 bits (448), Expect = 2.510e-49
Identity = 101/247 (40.89%), Postives = 166/247 (67.21%), Query Frame = 1
Query:   76 SASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVE-NRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813
            S    DPF+ V+DEL AK+E I++R+ ++  LL    T   ++ F++ RK L +E++GA+ QLKDL  TV+YV+ +R +F HID  EL ER+ F++ ++  + +ARD++ G +   K+  D+++ ++  +  G   A T+LE  NT+ I  Q+AR +  +  QD +LE+L   VDRV   A  I+ EL++Q+RM+  ++ +LDE TE+MNFVMG+L KLLKTK  C +WT++ L++VL+++V L+++
Sbjct:   12 SGGANDPFHVVKDELVAKLESIELRVGQFNGLLYGPGTTAGSKPFRDCRKALGREIRGAEGQLKDLGLTVDYVERDRGAFSHIDDRELSERRDFVAAARSRVANARDAVGGPRARAKMDADDKAAVAAQQ--GDYGASTDLEMANTDFIHGQRARTQATMREQDDNLEQLDGAVDRVHAMASEIHGELQTQSRMINDMESELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLVVMVMLVIW 256          
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A836CAK7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK7_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.180e-47
Identity = 104/245 (42.45%), Postives = 155/245 (63.27%), Query Frame = 1
Query:   79 ASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813
            AS+ DP++  RD+++AKI  ++ +  +    ++   T+ +RD +EL+  ++++++ A  QL+DL+RTV+YV+ +R SF HID AEL +RK FL+  K++L       +G +   KL  +  ++   YR KG L AK+  E DNTE I DQ++    ++ARQDQDLEELG HVDRVG  A  INEELR Q RML  L++D+    E M  VMG + K+LKTK +  IW ++ L +      FL+VY
Sbjct:    5 ASSGDPYFVARDQVAAKIAAVQAKHAQLNAAIDKARTLTDRDVKELKPVVARDLETAKGQLRDLKRTVDYVEKDRASFPHIDDAELRDRKAFLNAQKKILNAIVADTEGDKLAAKLEKETAAKRDSYR-KGDLGAKSNAEADNTEFIHDQRSNRMAHIARQDQDLEELGEHVDRVGMHAETINEELRDQGRMLDDLNEDIVTTHESMGMVMGAMAKILKTKDRAQIWLIVTLVVXXXXXXFLVVY 248          
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S3ZTE6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTE6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 3.060e-44
Identity = 102/242 (42.15%), Postives = 152/242 (62.81%), Query Frame = 1
Query:   91 DPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVE-NRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813
            DPF+ V+DEL  K+  I+ R+  +  LL  + T   N  F+E +K +++EV+ A+AQL+DL  TVEYV+ +R +F HI+ AEL +RK F+ ++K+ +  ARD++ G +   K+  DEQ+ L+  R  G   A  +LE  NT  I    ARV   +  QD+ LE+L                EL +Q RML  ++D+LDE TE+MNFVMG+L KLLKTK  C +WT++ L++VLI++VFL++Y
Sbjct:  100 DPFHVVKDELVVKLRSIEGRVATFTTLLYGSGTTHGNPRFREAKKAVAREVRAAEAQLRDLALTVEYVERDRGAFPHINDAELNQRKAFVDKAKRDVASARDAVAGPRARAKIEADEQAALASQR--GAYDASGDLEMQNTAFIHSSHARVAATIQEQDEGLEQLDGAXXXXXXXXXXXXXELSAQARMLDDMEDELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLIVMVFLVIY 339          
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A4D9DA67_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA67_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.150e-41
Identity = 90/243 (37.04%), Postives = 152/243 (62.55%), Query Frame = 1
Query:   88 QDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVYV 816
            QDPF+A R+EL ++++YI+ + E +  LL  TNT  +   ++LR  L ++++ A+ Q ++L + V  V+ NR+ F HID+ E+ +R+ F+++ KQ L+   ++L+      K++ D +     +             +   + I +Q++R  + L  QD+ LEELGT VDRVG  A  +N+EL +QNRML  L+ +++   E+M+FVMG+L KLLKTK K  +W ++VL++VLI+L+ L +YV
Sbjct:    3 QDPFFAAREELRSRVDYIQTQHENFLRLLQTTNTAPDLSCRDLRDSLCRDIEAAENQCRELEKVVAVVEKNRQRFRHIDNHEIGQRRAFVTKMKQSLVKIWNNLESDYVKNKMSGDRRDPSRSFDGGAEGHRTGRSGKRANDFIEEQRSRQHLMLCEQDEGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMSFVMGKLSKLLKTKDKYQLWLIIVLTVVLIVLILLTIYV 245          
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S0CB12_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CB12_9STRA)

HSP 1 Score: 150 bits (379), Expect = 8.120e-39
Identity = 91/249 (36.55%), Postives = 158/249 (63.45%), Query Frame = 1
Query:   61 MSINTSASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVEN-RDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFL 804
            + +N++    DPF+  RD+++ K+  +   L RY  ++  T+T  N  + ++ +K L + +K A++ LKDL+ TV  V+ N   F HI H EL  R+ F+ ++K  L + +D +      +K+ADDE++ LS  R  G  +  +  +R+ ++ + +++A+ ++ L +QD+ L+ LG  V RVG+ A  I++EL+ QNRML   ++DLD+A E++  VMG+L KLLKTK+K  + T+L+LSL++I+L FL
Sbjct:   40 LELNSNQGADDPFHVFRDDVTRKLNLVDESLNRYTRVVYETDTAVNTHELKDSKKQLKRHLKHAESTLKDLQSTVRAVERNPNQFHHISHEELRSRQIFVEDAKDRLANCKDKITSASVRKKIADDEKA-LS-LRRMGDASNVSRNQREESDMLQNERAQSQVMLKQQDETLDVLGEAVQRVGDIADNIHDELQVQNRMLSDFEEDLDDAEEKLGMVMGKLAKLLKTKNKWQLGTILILSLIVIVLFFL 286          
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S4J3Q8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3Q8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.540e-38
Identity = 89/247 (36.03%), Postives = 157/247 (63.56%), Query Frame = 1
Query:   76 SASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENR-DFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813
            +A   DPF+  R++L+ K++ +   L RY  ++++T+T  N  + ++ +K L +++K A++ LKDL+ TV  V++NR+ F HI+ AEL +R+ F++ S+  +  A+  ++      K+  DE+ + +  R  G   A+++ +R++   + DQ A+ ++ L +QD+ LE+L   V RVG+ A  I+EEL  QN+ML  ++D      E++  VMG+L K+LKTK+KC I T+L L+LV+ IL FL++Y
Sbjct:  102 TAVEDDPFHVFREDLTRKLDLVDEALARYLRVVDSTDTAVNTAEVKDAKKHLKRQIKNAESALKDLQTTVTMVESNRKKFFHINDAELHDRRKFVTRSRDCISKAKKDMNSDDVKAKILTDERRKAA--RRAGEAGAQSDRDRESASFVADQHAQAQIMLQQQDETLEDLDDAVVRVGQMAGEIHEELGQQNKMLQEMEDXXXXXXEKLGMVMGKLAKMLKTKNKCQIGTILCLTLVVFILFFLVIY 346          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW1_ECTSI7.890e-12878.97Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A7S2S2M2_9STRA1.280e-6047.76Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K6G0_9STRA2.150e-5548.26Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2FMQ2_9STRA6.480e-5442.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0XYP6_AURAN2.510e-4940.89t-SNARE coiled-coil homology domain-containing pro... [more]
A0A836CAK7_9STRA1.180e-4742.45Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S3ZTE6_9STRA3.060e-4442.15Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A4D9DA67_9STRA1.150e-4137.04t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S0CB12_9STRA8.120e-3936.55Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4J3Q8_9STRA4.540e-3836.03Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1439contigH-paniculata_contig1439:11703..16296 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score380.6
Seed ortholog evalue5.9e-103
Seed eggNOG ortholog2880.D7FKW1
Preferred nameSTX6
KEGG koko:K02925,ko:K03691,ko:K08498,ko:K08499,ko:K08500
KEGG ReactionR09295
KEGG Pathwayko00514,ko03010,ko04130,map00514,map03010,map04130
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000138,GO:0000139,GO:0000149,GO:0001505,GO:0003674,GO:0003824,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005783,GO:0005794,GO:0005795,GO:0005802,GO:0005829,GO:0005886,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006897,GO:0006904,GO:0006906,GO:0006996,GO:0007030,GO:0007032,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008417,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016197,GO:0016482,GO:0016740,GO:0016757,GO:0016758,GO:0017156,GO:0019538,GO:0019905,GO:0022406,GO:0023052,GO:0023061,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030285,GO:0030424,GO:0030658,GO:0030659,GO:0030672,GO:0031090,GO:0031201,GO:0031224,GO:0031300,GO:0031301,GO:0031410,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0031985,GO:0032456,GO:0032588,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0034613,GO:0034645,GO:0036065,GO:0036066,GO:0036211,GO:0042147,GO:0042886,GO:0042995,GO:0043005,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045335,GO:0046903,GO:0046907,GO:0046922,GO:0048278,GO:0048284,GO:0048471,GO:0048489,GO:0050789,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055037,GO:0060341,GO:0061024,GO:0061025,GO:0065007,GO:0065008,GO:0070013,GO:0070085,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0090161,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098563,GO:0098588,GO:0098657,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099501,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903827
EggNOG free text desc.SNAP receptor activity
EggNOG OGsKOG3202@1,KOG3202@2759
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-17_001570.1
EC2.4.1.221
COG Functional cat.U
CAZyGT65,GT68
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01003,ko03011,ko04131
Exons8
Model size1234
Cds size759
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1439.2637.1prot_H-paniculata_contig1439.2637.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1439 12118..16236 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929144.9582124-UTR-H-paniculata_contig1439:11702..121171622929144.9582124-UTR-H-paniculata_contig1439:11702..12117Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1439 11703..12117 -
1691480748.6315172-UTR-H-paniculata_contig1439:11702..121171691480748.6315172-UTR-H-paniculata_contig1439:11702..12117Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1439 11703..12117 -
1622929145.135697-UTR-H-paniculata_contig1439:16236..162961622929145.135697-UTR-H-paniculata_contig1439:16236..16296Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1439 16237..16296 -
1691480748.7066286-UTR-H-paniculata_contig1439:16236..162961691480748.7066286-UTR-H-paniculata_contig1439:16236..16296Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1439 16237..16296 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929144.9735305-CDS-H-paniculata_contig1439:12117..121941622929144.9735305-CDS-H-paniculata_contig1439:12117..12194Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 12118..12194 -
1691480748.6425297-CDS-H-paniculata_contig1439:12117..121941691480748.6425297-CDS-H-paniculata_contig1439:12117..12194Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 12118..12194 -
1622929144.9992893-CDS-H-paniculata_contig1439:12495..125871622929144.9992893-CDS-H-paniculata_contig1439:12495..12587Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 12496..12587 -
1691480748.6502156-CDS-H-paniculata_contig1439:12495..125871691480748.6502156-CDS-H-paniculata_contig1439:12495..12587Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 12496..12587 -
1622929145.013781-CDS-H-paniculata_contig1439:13138..132451622929145.013781-CDS-H-paniculata_contig1439:13138..13245Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 13139..13245 -
1691480748.6578639-CDS-H-paniculata_contig1439:13138..132451691480748.6578639-CDS-H-paniculata_contig1439:13138..13245Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 13139..13245 -
1622929145.0318246-CDS-H-paniculata_contig1439:13753..138521622929145.0318246-CDS-H-paniculata_contig1439:13753..13852Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 13754..13852 -
1691480748.665517-CDS-H-paniculata_contig1439:13753..138521691480748.665517-CDS-H-paniculata_contig1439:13753..13852Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 13754..13852 -
1622929145.0531785-CDS-H-paniculata_contig1439:14001..141181622929145.0531785-CDS-H-paniculata_contig1439:14001..14118Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 14002..14118 -
1691480748.672835-CDS-H-paniculata_contig1439:14001..141181691480748.672835-CDS-H-paniculata_contig1439:14001..14118Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 14002..14118 -
1622929145.087462-CDS-H-paniculata_contig1439:14522..146261622929145.087462-CDS-H-paniculata_contig1439:14522..14626Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 14523..14626 -
1691480748.6803513-CDS-H-paniculata_contig1439:14522..146261691480748.6803513-CDS-H-paniculata_contig1439:14522..14626Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 14523..14626 -
1622929145.108033-CDS-H-paniculata_contig1439:15553..156631622929145.108033-CDS-H-paniculata_contig1439:15553..15663Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 15554..15663 -
1691480748.6882775-CDS-H-paniculata_contig1439:15553..156631691480748.6882775-CDS-H-paniculata_contig1439:15553..15663Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 15554..15663 -
1622929145.120032-CDS-H-paniculata_contig1439:16183..162361622929145.120032-CDS-H-paniculata_contig1439:16183..16236Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 16184..16236 -
1691480748.6981294-CDS-H-paniculata_contig1439:16183..162361691480748.6981294-CDS-H-paniculata_contig1439:16183..16236Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1439 16184..16236 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1439.2637.1

>prot_H-paniculata_contig1439.2637.1 ID=prot_H-paniculata_contig1439.2637.1|Name=mRNA_H-paniculata_contig1439.2637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=253bp
MSINTSASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQ
ELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLS
ESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNT
EHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLM
ALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLV
YV*
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mRNA from alignment at H-paniculata_contig1439:11703..16296-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1439.2637.1 ID=mRNA_H-paniculata_contig1439.2637.1|Name=mRNA_H-paniculata_contig1439.2637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4594bp|location=Sequence derived from alignment at H-paniculata_contig1439:11703..16296- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTGTAAACCTTTTGGTGGAGGTTGGTGGAGGTTGGTGGAGGTTAGTAGA GGTCCGAGGGATGTCGATCAACACGTCAGCTTCGACCCAAGACCCCTTTT ATGCTGTACGAGAGTGAGTGTAAATCATATGCTGCCAATCGCAAATCAGA TGAATCACCGATCCGTCCAAGACGGAACATTCAAGGACGATGATGCTGTT TGAACGCACATAGCCGTCGATGGCATCTGTTGAGTCCGGTACTGGAATGA ATGCCATGTCGTGCTATTCTCGCAGTCATTGTCTGTGGGCCTCTGTGCTG ATGAACGTAAGTAGTGTAAGCTAGAGGTATCGTGTTATTTATCGAGAGCA CTAACCACCGTTGCGCACTGCATGTACAGACATCTATAGGTAGCAGGAGG TATTGATGTACCAAGAGTCGTATTAAGTTGGTGTCTGCATTAGAGGAATA GAGCTCTGTTTACATGAACCATTTATTAAGTACTTGTTAATCGTGCTGTA CACAGACAAGTACACAGAAACAAGAGGGATGCTCCCTATCCAAATTTCAA CTTCCGCGAATCATATTCAGCACAACAGTCATTAGTTCCGTCGCCTATCC CTGATTGCCCGGCGTTGGCTCATAATGTTGCAGTGAGCTATCAGCTAAGA TCGAGTACATCAAGGTACGATTAGAGCGTTATCAGGACTTGCTAAACAAC ACCAACACTGTGGAAAACCGCGACTTCCAGGAACTGCGGAAAGGTGAGCC CATAGTCTGCCAGGTGCGGCTATCCGTCCTTGATTCGTCTACGAAATATT TGTTTTCCTGGGCCAACGTTCATCTTACGTTCATCTTACCATGTGCAATA CCTGCAATGCTGGAAAATTCTTGTTTCGGAACAAAAGCACCATTTCTATG ACAACAAATGTCGAGAGACCGCGATGTACTTGTAGTCGTTGGGCACAACC TGTATATGCTGTATGCACCATCTGTATTGGACTGTCTGCCTCAACAGTCG GTGCTTCCGATCCCCGTAATCATGTCTATCATAGACGTAGTTTTTCCCTG TCCTGAGGCAGTGATTGGATATGTGTTGGATTGGAATCAGCGGTCACCGG AGCCCATGAGTCATAACACTTGGAGTTTGTATAAACTTGATTTGCAATCC CCCCCCCCGTTCGACCACCGACCTCTAGTGAAAATAAATGGTCGGATTTT GGAGACAGCGGCAACCATGATTGTGTTACGCCGTATGTTTGCACAATATC CCGTTGCCTATATGGTATTTGCGAACGTCTCTTATATCCGCCATCTCCCT AGCAATGGATGTGGACGATAGCGACTATCATCGGGGACGGTTAGGAGTAC TTCCCCTTGCCTGTGGATACCATTCCCCCTTCGTGATGTTTCTATTTTTT TGTAACAGAACTGTAGTATCACCGTTGATGGTGTTTTTGAATAACTTTGG GAATGCTGTCTCGGATCGAATCATTTCTCCTCCTTGAAATTCGTACTTTG CAAAAGAATAGATCATATCCTCCTTGTGCGGTTAGGAAAACGATTTGTCT GGACGATGTTTATTTTCATATATTTTACATATGAAACTAGATTCGACCTT CGATATGAATGTAAGGGACGGCCGTGCCTTCGTCCTTGACTATTTCCTCT GGATCGCTGGATACTCCTAGGACTATCCAAGGAGGTCAAGGGTGCAGATG CCCAGCTCAAAGATCTGCGAAGGACTGTGGAGTACGTTGATAACAACCGA GAGTCGTTCCTTCACATAGACCATGTAAGTGTGTTCAAGTGAGTGTTGAG AACAACAGATTGTTTCCAACAAGAACGTTTTCCGCAGTACCTCGTTACCA AGCTACTCGATACAGGCTGCTGCGTTACACCGCCCAATAGTGATCTACTT TGCGCAACATCACCATACTACATGAGATGGTAAGGTCAACAGTGTACCCA GCACATGAGTAGTGACCCGGAGTTAGGGATTTGTGCGTAATATATCGGGG ATAATAAAAAGTGCAAAATGTTGATATACTCACTCTCTGGCACACTCAAC GTTGTGAGACCTGGTGTTGGAGGTGTCGTTTAATCAGCATACAGAGAGAG AAAGAGAGGGAGAGAGAGAGAGATCTGCGGCTTGCCCAACCATCACGTTC TTTCTCTTTGACACAACGCATCTAACAGGCTGAATTATTGGAGAGGAAAA CGTTCCTGTCCGAGTCCAAGCAAGTTTTACTCGACGCGAGAGATTCCCTA GACGGACGGCAGACATGGCAAAAGTTAGCGGACGATGAACAGTCGGTGAG GACGCGCGTATGACGCTAGAGCAAACGCTGGCAGGAAAACAATATCTGAC GTCGTGCCATGCGGTTTGTTTTCACTGAAATCGATATAGGGACCCCGTCA CTCCACAAATCAGGCACAACGCGCTCCCACTCTGTCTTCTCCAGGAACTT TCCAAGTATCGTAGCAAGGGCACTTTGGCTGCAAAAACAGAGCTGGAGCG AGATAACACCGAGCATATCCTGGATCAGCAAGCCCGCGTAAGGGTAAGTC TGGACGCGTGCCTGAAGGAAACATGAAGCTTTGCATGGTTTAGAGCCAAC TACAGATGAAATATTTGTATAAAAACTATTTTGTTCACTATCTAATAAAT AGGTGCGTTGTTTAGAACAGCGGGATCGAAACGAGGGAATCACTAAGGCA ATCACATTGAATCTGATCTACCCAGGCAAAGAGTGTGACTTCTAGGAGCT TTTTAAAGCCCACTTATTGCATGCGAAGTTCTTGGTGGATGTTCGCACGG CACAACGTTGGCTTCCGTCGCTCGTGCGAACTCGTATCCTGTATCATTGT ATGACTGCTAGCTGGCTTCGCTTGCCTTTTTTCGTATAGTGGCACAACGG CGTGCCAAGGCACTGTGGATACAGTCACCACTTCGCACAAGGTTGATAAT GGATAGGAGATACAGTATCAGAGCACCCTCTCGCAGGGTAGAGGCTGACA ATCAAGCCAAACTGAAAACGGTGGCTACCACGCTATTGCGCGTTTGTACA GATGAACTTGGCGCGACAAGATCAAGATTTGGAGGAGTTGGGAACACATG TAGATCGAGTCGGGGAGACTGCTATAATCATTAACGAGGAGCTTCGGAGC CAGAACAGGTGAGTTAACTTTGCCAATGCTCTTGGAGGTTCTAGAAACCA GTTTGAGATCACGTCTCGTACTGCACCCAGGAAATCGTCCTGCTGAGTGT AATATGCTTGTGTACATCATACTGTCATTTTGGTAATCAAGGTTACGAGG CCCTATCCAATAGACCCTTGCGCGTCTGTTGTTGACCCCTACTGGCGAGT TCAGGATTGGATCATCCGTCCATCATAGCAACGCGACACAGTTGAGAAAT CCATATACCAGAGATAAATAGCTGGATGCCGTTGAGCACGATGACTTGAT ACTTACTACCCATGTGATGTGACTGTGGCGAGCGATAAGCGCTTATTCTG CGATCATGCGAATTGACGAATGTTGACGGTGCGATAAATCGATATCTTGG CTAAAATGACATCTCTTTTCCGCTCTCTAGGCATCTGCATTGCTGTTCTG TGTTAGTGAGTTGCAACCATCGAACGTGCCACAAGGACATGCAAGTCGAG ACCCGTTGCACAAGACAGATAAATTCGGAACTTGATATTTCCCCCATAAT CATGTTTAGGATGCTAATGGCGTTGGATGATGACTTGGATGAGGCGACAG AGCGAATGAACTTCGTCATGGGTAGGCTTGGAAAGCTTCTCAAGACCAAG AGTGAGTCAGTTGTGTGGTGATGGTGAAGCTGACATTGCCTGCCAGTTGG CACTTCTTTTCTTAACTCCCTTCGTTGCTTTGGTTCTTCAAGAAAATATT GTACCTCAAGTCTGGTGTAAAAAAGATTTCGGTTAGTGCCACTAGATCAT GTAAATAGTTGCGCGTTTAACAAGATTTACGTATACCATGTAAGCACTTG ATTTATGCCCTGGAACGCCCTGCAACTTTCACTAAGCAACGTTGTTCACA CCCGTGCTTCTGCCTTGCTGCTTTGTTGATGTGCTCTGATGTTTTTCCGC AGGCAAATGTCATATCTGGACGGTGCTTGTACTGTCACTGGTGTTGATCA TCCTTGTGTTTCTACTCGTGTACGTTTAGCGATACGGCTCGAATGACGCT GTGTGCTCGCCTTGGCGACATTGTATATCACCGGAGTTATAATGTTTTGA GTTGTAATCACGTCGCCCTCGTTTCGTTCATACCCGTGAGGTATAATAGT GAGTGTACTCGTAGCGCTGCCATGCATCCCGAAAGTAGATCGAAAGTGCG TGTTCTGCATCCGCGAGAGGAGCTATTGGACAGGAGGAGTGTTGTGATCA AATGAAGGCGAAATGAGACGTAGTGCGTCATCTTACCTGCTATCTCATAT CTTGGGACTCGCTTTTAGGGTAAAATCCCTCGATTATTTCGGCAAAAAAT GCTGGTAAATTATTTGAACGCAAAGATGATTTGGTCTATTCCTACAAAAG AAGTGAACGTTGTGCATGAAGTGGAGCGGCGACAAAAGATTTAT
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Coding sequence (CDS) from alignment at H-paniculata_contig1439:11703..16296-

>mRNA_H-paniculata_contig1439.2637.1 ID=mRNA_H-paniculata_contig1439.2637.1|Name=mRNA_H-paniculata_contig1439.2637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at H-paniculata_contig1439:11703..16296- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGATCAACACGTCAGCTTCGACCCAAGACCCCTTTTATGCTGTACG
AGAATGTCGATCAACACGTCAGCTTCGACCCAAGACCCCTTTTATGCTGT
ACGAGATGAGCTATCAGCTAAGATCGAGTACATCAAGGTACGATTAGAGC
GTTATCAGGACTTGCTAAACAACACCAACACTGTGGAAAACCGCGACTTC
CAGGAACTGCGGAAAGTGAGCTATCAGCTAAGATCGAGTACATCAAGGTA
CGATTAGAGCGTTATCAGGACTTGCTAAACAACACCAACACTGTGGAAAA
CCGCGACTTCCAGGAACTGCGGAAAGGACTATCCAAGGAGGTCAAGGGTG
CAGATGCCCAGCTCAAAGATCTGCGAAGGACTGTGGAGTACGTTGATAAC
AACCGAGAGTCGTTCCTTCACATAGACCATGACTATCCAAGGAGGTCAAG
GGTGCAGATGCCCAGCTCAAAGATCTGCGAAGGACTGTGGAGTACGTTGA
TAACAACCGAGAGTCGTTCCTTCACATAGACCATGCTGAATTATTGGAGA
GGAAAACGTTCCTGTCCGAGTCCAAGCAAGTTTTACTCGACGCGAGAGAT
TCCCTAGACGGACGGCAGACATGGCAAAAGTTAGCGGACGATGAACAGTC
GGCTGAATTATTGGAGAGGAAAACGTTCCTGTCCGAGTCCAAGCAAGTTT
TACTCGACGCGAGAGATTCCCTAGACGGACGGCAGACATGGCAAAAGTTA
GCGGACGATGAACAGTCGGAACTTTCCAAGTATCGTAGCAAGGGCACTTT
GGCTGCAAAAACAGAGCTGGAGCGAGATAACACCGAGCATATCCTGGATC
AGCAAGCCCGCGTAAGGGAACTTTCCAAGTATCGTAGCAAGGGCACTTTG
GCTGCAAAAACAGAGCTGGAGCGAGATAACACCGAGCATATCCTGGATCA
GCAAGCCCGCGTAAGGATGAACTTGGCGCGACAAGATCAAGATTTGGAGG
AGTTGGGAACACATGTAGATCGAGTCGGGGAGACTGCTATAATCATTAAC
GAGGAGCTTCGGAGCCAGAACAGATGAACTTGGCGCGACAAGATCAAGAT
TTGGAGGAGTTGGGAACACATGTAGATCGAGTCGGGGAGACTGCTATAAT
CATTAACGAGGAGCTTCGGAGCCAGAACAGGATGCTAATGGCGTTGGATG
ATGACTTGGATGAGGCGACAGAGCGAATGAACTTCGTCATGGGTAGGCTT
GGAAAGCTTCTCAAGACCAAGAGATGCTAATGGCGTTGGATGATGACTTG
GATGAGGCGACAGAGCGAATGAACTTCGTCATGGGTAGGCTTGGAAAGCT
TCTCAAGACCAAGAGCAAATGTCATATCTGGACGGTGCTTGTACTGTCAC
TGGTGTTGATCATCCTTGTGTTTCTACTCGTGTACGTTTAGGCAAATGTC
ATATCTGGACGGTGCTTGTACTGTCACTGGTGTTGATCATCCTTGTGTTT
CTACTCGTGTACGTTTAG
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