mRNA_H-paniculata_contig1439.2637.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: D7FKW1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW1_ECTSI) HSP 1 Score: 377 bits (969), Expect = 7.890e-128 Identity = 199/252 (78.97%), Postives = 232/252 (92.06%), Query Frame = 1 Query: 61 MSINTSASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVYV 816 MS+N+ AS DPFYAVRDE+SAKIEYIKVRLER+QDLLNNTNT +NRDFQ+LRKGL+KEVKGADAQL+DLRRTVEYV+NNR+SF HID+AEL ERKTFLS+SKQVLL A D+LDG+QT +K+A D++SE++KYRSKG L A+TE+ERDNTEHILD Q+RVRM LARQD+DLEELGTHV+RVGETA +INEELRSQNR+L ALDDD+DEATE MNFVMGRLGKLLKTKSKC IWT+L+LS +LIILV +L+YV Sbjct: 1 MSLNSVAS-HDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIYV 251
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S2S2M2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M2_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.280e-60 Identity = 117/245 (47.76%), Postives = 166/245 (67.76%), Query Frame = 1 Query: 79 ASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813 A+ QDPFY V+DEL+AK+ I+ RL+ ++ LL T+T N+DF++ +K L +++K A+ QLKDL TVE+V +R F HID +L +R T+++E+KQ L + + G +KLADD + ++ K + L A + +NT I QQA+ RM + +QD+DLEELG VDRV + A+ IN EL++QNRML L+ DLDEATE+MNFVMG+L KLLKTK C IWTV++L +FLL+Y Sbjct: 2 AAAQDPFYVVKDELTAKVHTIQKRLQTFKRLLETTDTATNQDFKDSKKALGRDLKAAEKQLKDLTLTVEFVQKDRAQFAHIDDYDLQQRTTYIAETKQALGEIKAYYSGDDVKRKLADDMRKDIMKQPT-SNLGATSSDAMENTHFIQGQQAQQRMIMEQQDEDLEELGYAVDRVNDMAVGINTELKTQNRMLKDLESDLDEATEKMNFVMGKLAKLLKTKDTCQIWTVIILFFXXXXXIFLLIY 245
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S3K6G0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6G0_9STRA) HSP 1 Score: 192 bits (489), Expect = 2.150e-55 Identity = 111/230 (48.26%), Postives = 159/230 (69.13%), Query Frame = 1 Query: 76 SASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTV 765 SA++ DPFY V+DEL K+E I RLERY++LL NT + +F+E++KGLS+EVK A+AQ+KDL TVEYV+ +R +F HID EL ERK F++ +K L ARD L G + K+ DE+ +L+ R G AKT++E NT+ I +Q A+ R + QD++LE L + VDRV A I+ EL++Q+R++ L++++DE TE+MNFVMG+L KLLKTK C + T+ Sbjct: 14 SAASHDPFYVVKDELVNKLESISSRLERYENLLWKINTAASVEFKEVKKGLSREVKAAEAQIKDLALTVEYVEKDRNAFAHIDDRELDERKKFIATTKNKLSGARDVLTGPKARAKIEADEKQQLAATR--GNYGAKTDIEMANTDFIHNQHAQTRTIMQEQDENLEHLDSAVDRVHRMATEIHGELKTQSRLIGDLENEMDETTEKMNFVMGKLAKLLKTKDTCQLLTI 241
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S2FMQ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMQ2_9STRA) HSP 1 Score: 188 bits (478), Expect = 6.480e-54 Identity = 105/245 (42.86%), Postives = 168/245 (68.57%), Query Frame = 1 Query: 79 ASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813 A++ DPFY V+DELS KI+ I + ++ +LL++TNT ++ +F++ R+ L K++K A+ QL+DL TV+ V +RE F HID EL +R ++ ++++ L + + + G + +K+ DE++E+ + +L A E +NT+ I +QQA+ +M + +QD++LEELG VDRV + A+ INEEL+ QN+ML L++D+DEA E+MNFVMG++ KLLKTK C IWTV++L VFL++Y Sbjct: 2 AASVDPFYVVKDELSMKIDAITGKTVKFLELLDSTNTAKSPEFKDARRSLGKDLKSAEKQLRDLTFTVDMVQKDREQFAHIDDYELEQRDAYIKKARKNLNEMKSTYQGERVKRKMIADERAEIES-KPMSSLGATNSDEAENTQFIHEQQAQGQMIIRQQDEELEELGYAVDRVNDMAVGINEELKVQNQMLKTLEEDIDEAAEKMNFVMGKMAKLLKTKDTCQIWTVIILVXXXXXXVFLVIY 245
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: F0XYP6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYP6_AURAN) HSP 1 Score: 177 bits (448), Expect = 2.510e-49 Identity = 101/247 (40.89%), Postives = 166/247 (67.21%), Query Frame = 1 Query: 76 SASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVE-NRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813 S DPF+ V+DEL AK+E I++R+ ++ LL T ++ F++ RK L +E++GA+ QLKDL TV+YV+ +R +F HID EL ER+ F++ ++ + +ARD++ G + K+ D+++ ++ + G A T+LE NT+ I Q+AR + + QD +LE+L VDRV A I+ EL++Q+RM+ ++ +LDE TE+MNFVMG+L KLLKTK C +WT++ L++VL+++V L+++ Sbjct: 12 SGGANDPFHVVKDELVAKLESIELRVGQFNGLLYGPGTTAGSKPFRDCRKALGREIRGAEGQLKDLGLTVDYVERDRGAFSHIDDRELSERRDFVAAARSRVANARDAVGGPRARAKMDADDKAAVAAQQ--GDYGASTDLEMANTDFIHGQRARTQATMREQDDNLEQLDGAVDRVHAMASEIHGELQTQSRMINDMESELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLVVMVMLVIW 256
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A836CAK7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK7_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.180e-47 Identity = 104/245 (42.45%), Postives = 155/245 (63.27%), Query Frame = 1 Query: 79 ASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813 AS+ DP++ RD+++AKI ++ + + ++ T+ +RD +EL+ ++++++ A QL+DL+RTV+YV+ +R SF HID AEL +RK FL+ K++L +G + KL + ++ YR KG L AK+ E DNTE I DQ++ ++ARQDQDLEELG HVDRVG A INEELR Q RML L++D+ E M VMG + K+LKTK + IW ++ L + FL+VY Sbjct: 5 ASSGDPYFVARDQVAAKIAAVQAKHAQLNAAIDKARTLTDRDVKELKPVVARDLETAKGQLRDLKRTVDYVEKDRASFPHIDDAELRDRKAFLNAQKKILNAIVADTEGDKLAAKLEKETAAKRDSYR-KGDLGAKSNAEADNTEFIHDQRSNRMAHIARQDQDLEELGEHVDRVGMHAETINEELRDQGRMLDDLNEDIVTTHESMGMVMGAMAKILKTKDRAQIWLIVTLVVXXXXXXFLVVY 248
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S3ZTE6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTE6_9STRA) HSP 1 Score: 166 bits (420), Expect = 3.060e-44 Identity = 102/242 (42.15%), Postives = 152/242 (62.81%), Query Frame = 1 Query: 91 DPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVE-NRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813 DPF+ V+DEL K+ I+ R+ + LL + T N F+E +K +++EV+ A+AQL+DL TVEYV+ +R +F HI+ AEL +RK F+ ++K+ + ARD++ G + K+ DEQ+ L+ R G A +LE NT I ARV + QD+ LE+L EL +Q RML ++D+LDE TE+MNFVMG+L KLLKTK C +WT++ L++VLI++VFL++Y Sbjct: 100 DPFHVVKDELVVKLRSIEGRVATFTTLLYGSGTTHGNPRFREAKKAVAREVRAAEAQLRDLALTVEYVERDRGAFPHINDAELNQRKAFVDKAKRDVASARDAVAGPRARAKIEADEQAALASQR--GAYDASGDLEMQNTAFIHSSHARVAATIQEQDEGLEQLDGAXXXXXXXXXXXXXELSAQARMLDDMEDELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLIVMVFLVIY 339
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A4D9DA67_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA67_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.150e-41 Identity = 90/243 (37.04%), Postives = 152/243 (62.55%), Query Frame = 1 Query: 88 QDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVYV 816 QDPF+A R+EL ++++YI+ + E + LL TNT + ++LR L ++++ A+ Q ++L + V V+ NR+ F HID+ E+ +R+ F+++ KQ L+ ++L+ K++ D + + + + I +Q++R + L QD+ LEELGT VDRVG A +N+EL +QNRML L+ +++ E+M+FVMG+L KLLKTK K +W ++VL++VLI+L+ L +YV Sbjct: 3 QDPFFAAREELRSRVDYIQTQHENFLRLLQTTNTAPDLSCRDLRDSLCRDIEAAENQCRELEKVVAVVEKNRQRFRHIDNHEIGQRRAFVTKMKQSLVKIWNNLESDYVKNKMSGDRRDPSRSFDGGAEGHRTGRSGKRANDFIEEQRSRQHLMLCEQDEGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMSFVMGKLSKLLKTKDKYQLWLIIVLTVVLIVLILLTIYV 245
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S0CB12_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CB12_9STRA) HSP 1 Score: 150 bits (379), Expect = 8.120e-39 Identity = 91/249 (36.55%), Postives = 158/249 (63.45%), Query Frame = 1 Query: 61 MSINTSASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVEN-RDFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFL 804 + +N++ DPF+ RD+++ K+ + L RY ++ T+T N + ++ +K L + +K A++ LKDL+ TV V+ N F HI H EL R+ F+ ++K L + +D + +K+ADDE++ LS R G + + +R+ ++ + +++A+ ++ L +QD+ L+ LG V RVG+ A I++EL+ QNRML ++DLD+A E++ VMG+L KLLKTK+K + T+L+LSL++I+L FL Sbjct: 40 LELNSNQGADDPFHVFRDDVTRKLNLVDESLNRYTRVVYETDTAVNTHELKDSKKQLKRHLKHAESTLKDLQSTVRAVERNPNQFHHISHEELRSRQIFVEDAKDRLANCKDKITSASVRKKIADDEKA-LS-LRRMGDASNVSRNQREESDMLQNERAQSQVMLKQQDETLDVLGEAVQRVGDIADNIHDELQVQNRMLSDFEEDLDDAEEKLGMVMGKLAKLLKTKNKWQLGTILILSLIVIVLFFL 286
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Match: A0A7S4J3Q8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3Q8_9STRA) HSP 1 Score: 150 bits (378), Expect = 4.540e-38 Identity = 89/247 (36.03%), Postives = 157/247 (63.56%), Query Frame = 1 Query: 76 SASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENR-DFQELRKGLSKEVKGADAQLKDLRRTVEYVDNNRESFLHIDHAELLERKTFLSESKQVLLDARDSLDGRQTWQKLADDEQSELSKYRSKGTLAAKTELERDNTEHILDQQARVRMNLARQDQDLEELGTHVDRVGETAIIINEELRSQNRMLMALDDDLDEATERMNFVMGRLGKLLKTKSKCHIWTVLVLSLVLIILVFLLVY 813 +A DPF+ R++L+ K++ + L RY ++++T+T N + ++ +K L +++K A++ LKDL+ TV V++NR+ F HI+ AEL +R+ F++ S+ + A+ ++ K+ DE+ + + R G A+++ +R++ + DQ A+ ++ L +QD+ LE+L V RVG+ A I+EEL QN+ML ++D E++ VMG+L K+LKTK+KC I T+L L+LV+ IL FL++Y Sbjct: 102 TAVEDDPFHVFREDLTRKLDLVDEALARYLRVVDSTDTAVNTAEVKDAKKHLKRQIKNAESALKDLQTTVTMVESNRKKFFHINDAELHDRRKFVTRSRDCISKAKKDMNSDDVKAKILTDERRKAA--RRAGEAGAQSDRDRESASFVADQHAQAQIMLQQQDETLEDLDDAVVRVGQMAGEIHEELGQQNKMLQEMEDXXXXXXEKLGMVMGKLAKMLKTKNKCQIGTILCLTLVVFILFFLVIY 346 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1439.2637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1439.2637.1 >prot_H-paniculata_contig1439.2637.1 ID=prot_H-paniculata_contig1439.2637.1|Name=mRNA_H-paniculata_contig1439.2637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=253bp MSINTSASTQDPFYAVRDELSAKIEYIKVRLERYQDLLNNTNTVENRDFQback to top mRNA from alignment at H-paniculata_contig1439:11703..16296- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1439.2637.1 ID=mRNA_H-paniculata_contig1439.2637.1|Name=mRNA_H-paniculata_contig1439.2637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4594bp|location=Sequence derived from alignment at H-paniculata_contig1439:11703..16296- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1439:11703..16296- >mRNA_H-paniculata_contig1439.2637.1 ID=mRNA_H-paniculata_contig1439.2637.1|Name=mRNA_H-paniculata_contig1439.2637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at H-paniculata_contig1439:11703..16296- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |