mRNA_H-paniculata_contig14372.2629.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14372.2629.1 vs. uniprot
Match: A0A6H5JWY7_9PHAE (Radical SAM core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWY7_9PHAE) HSP 1 Score: 309 bits (791), Expect = 1.100e-101 Identity = 155/203 (76.35%), Postives = 183/203 (90.15%), Query Frame = 1 Query: 4 PPLTNAVYMGMGEPMDNPLAVLRSLEVLTHPHAFAMAKNKISLSTVGPSPSAIRKMSEMPARLAWSVHAATDEVRKMLVPTTVHLMTELRDAFAEVLEKRGREYLFVEVVLIQGVNDSADAARALAALLRPLPTKSSVNLLPLNDTGHPLFRASTRENVEQFRRVLTEEGFVATIRTARGDEESSACGQLATSAQRERGLRRR 612 PPLTNAVYMGMGEP+DNP AV +SL+VLTHP AFAMAK+KIS+STVGPSP+AIR+M MP+RLAWSVHAATD+VR++LVPTTVH M ELRDAF EVL+ R RE+LFVEVVLI+G+NDS + ARALA+LLRPLP ++ +NLLP NDTGHP FRAS +E+VE+F+RVLT+EGFVATIRTARGDEESSACGQLAT+A ER L++R Sbjct: 208 PPLTNAVYMGMGEPLDNPGAVTQSLQVLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRLLVPTTVHTMAELRDAFGEVLQSRRREHLFVEVVLIKGMNDSPELARALASLLRPLPIRAGINLLPYNDTGHPFFRASPKESVEEFQRVLTQEGFVATIRTARGDEESSACGQLATTANSERVLKQR 410
BLAST of mRNA_H-paniculata_contig14372.2629.1 vs. uniprot
Match: A0A835Z3N5_9STRA (Radical SAM core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N5_9STRA) HSP 1 Score: 228 bits (582), Expect = 3.820e-71 Identity = 115/192 (59.90%), Postives = 147/192 (76.56%), Query Frame = 1 Query: 4 PPLTNAVYMGMGEPMDNPLAVLRSLEVLTHPHAFAMAKNKISLSTVGPSPSAIRKMSEMPARLAWSVHAATDEVRKMLVPTTVHLMTELRDAFAEVLEKRGREYLFVEVVLIQGVNDSADAARALAALLRPLPTKSSVNLLPLNDTGHPLFRASTRENVEQFRRVLTEEGFVATIRTARGDEESSACGQLAT 579 PPL N V+MGMGEP++N AV +L LT + FA ++ IS+STVGP+P+AIR+M +MPARLAWSVHAATD+VRK LVPTT H M ELRDAFAEVL RG+E+LFVEV ++ G+NDS D A+A+ LL LP ++ VNLLP ND GH +R S+ E +E+F+R+L G VAT+R+ RG E++ACGQLAT Sbjct: 140 PPLDNIVFMGMGEPLNNAQAVKLALRQLTDGNMFAFGRSHISVSTVGPTPNAIRQMVDMPARLAWSVHAATDDVRKQLVPTTAHTMEELRDAFAEVLLHRGKEHLFVEVTMLDGINDSPDHAQAMVQLLSTLPGRTRVNLLPYNDIGHLSYRPSSPETIEEFQRILQAGGLVATVRSTRGAGEAAACGQLAT 331
BLAST of mRNA_H-paniculata_contig14372.2629.1 vs. uniprot
Match: A0A0G4FWR1_VITBC (Radical SAM core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FWR1_VITBC) HSP 1 Score: 197 bits (502), Expect = 5.000e-58 Identity = 100/206 (48.54%), Postives = 141/206 (68.45%), Query Frame = 1 Query: 4 PPLTNAVYMGMGEPMDNPLAVLRSLEVLTHPHAFAMAKNKISLSTVGPSPSAIRKMSEMPARLAWSVHAATDEVRKMLVPTTVHLMTELRDAFAEVLEKRGREY------------LFVEVVLIQGVNDSADAARALAALLRPLPTKSSVNLLPLNDTGHPLFRASTRENVEQFRRVLTEEGFVATIRTARGDEESSACGQLATSA 585 PP+ NAV+MGMGEP++NP AV R+++ +T P AF + ++ I++STVGPSP++IR + ++P +AWSVHAA D VR++LVPTTVH MT+LRDAFA++L R ++ + VE L+ G+NDS + A AL L+R LP + VNLLP ND G P +R S V + + E G + ++R ARGDE+ +ACGQLAT+A Sbjct: 235 PPIRNAVFMGMGEPLNNPRAVRRAIQTMTDPFAFGLGRSHITVSTVGPSPASIRLLEDIPVHIAWSVHAARDNVRRLLVPTTVHPMTDLRDAFADMLIARSNKHQGPGRFPKRYLNIMVECTLLDGLNDSREDAEALVELVRGLPGEPKVNLLPYNDIGVPGYRRSPEAKVAAYLECVREGGVMCSVRRARGDEDMAACGQLATTA 440
BLAST of mRNA_H-paniculata_contig14372.2629.1 vs. uniprot
Match: A0A7S2W4X2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4X2_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.240e-57 Identity = 111/205 (54.15%), Postives = 132/205 (64.39%), Query Frame = 1 Query: 4 PPLTNAVYMGMGEPMDNPLAVLRSLEVLTHPHAFAMAKNKISLSTVGPSPSAIRKMSEMPARLAWSVHAATDEVRKMLVPTTVHLMTELRDAFAEVLEKRGREYLFVEVVLIQGVNDSADAARALAALLRPLPTKSSVNLLPLND-----------TGHPLFRASTRENVEQFRRVLTEEGFVATIRTARGDEESSACGQLATSA 585 PPLTN V+MGMGEP DN V L T F + + IS+STVGPSP AI + +P RLAWSVHAA D+VR++LVPTT H M ELRDAFA VL +R LFVEV L++G+NDS A ALA LLRPLP K+ VNLLP N H LFR + E V+ F+ VL EGFV T+R+ RG + +SACGQLA A Sbjct: 189 PPLTNVVFMGMGEPADNLEQV--HLAARTMVEGFRLGNSHISVSTVGPSPEAIEALESLPTRLAWSVHAAEDDVRRVLVPTTRHSMVELRDAFARVLARRRDRGLFVEVALVEGLNDSPHHALALAELLRPLPGKTRVNLLPYNPFAPEASDLPRAQAHALFRTPSPETVKTFQDVLYSEGFVCTVRSTRGADSASACGQLANRA 391
BLAST of mRNA_H-paniculata_contig14372.2629.1 vs. uniprot
Match: A0A7S4ESN9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ESN9_CHRCT) HSP 1 Score: 194 bits (494), Expect = 2.460e-57 Identity = 105/199 (52.76%), Postives = 135/199 (67.84%), Query Frame = 1 Query: 4 PPLTNAVYMGMGEPMDNPLAVLRSLEVLTHPHAFAMAKNKISLSTVGPSPSAIRKMSEMPARLAWSVHAATDEVRKMLVPTTVHLMTELRDAFAEVLEKRGREYLFVEVVLIQGVNDSADAARALAALLRPLPTKSSVNLLPLN------DTGHPLFRASTRENVEQFRRVLTEEGFVATIRTARGDEESSACGQLATS 582 PP+ N V+MGMGEP+DN +V +LEV+ P FA++K + +STVGPSP +IR ++ + ARLAWSVHAA D +RK+LVPTT H M ELRDAFA+VL +R L VE+ LI GVND A AL ALLRPLP K+ VNL+P N G F+ S+ +V +F++ L E + T+R RGD ES+ACGQLA S Sbjct: 194 PPIRNIVFMGMGEPLDNLDSVKSALEVMQDPFGFALSKKHLCVSTVGPSPQSIRALTSVGARLAWSVHAAEDSLRKLLVPTTAHSMAELRDAFAQVLAERNDRGLMVEIALIDGVNDGLADAEALHALLRPLPGKTRVNLIPYNVNEGLGAVGRQ-FKPSSSSSVSRFQKYLIERELICTVRETRGDGESAACGQLAVS 391
BLAST of mRNA_H-paniculata_contig14372.2629.1 vs. uniprot
Match: A0A7S0VC70_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VC70_9CRYP) HSP 1 Score: 191 bits (484), Expect = 3.940e-55 Identity = 98/197 (49.75%), Postives = 132/197 (67.01%), Query Frame = 1 Query: 4 PPLTNAVYMGMGEPMDNPLAVLRSLEVLTHPHAFAMAKNKISLSTVGPSPSAIRKMSEMPARLAWSVHAATDEVRKMLVPTTVHLMTELRDAFAEVLEKRGREY--LFVEVVLIQGVNDSADAARALAALLRPLPTKSS---VNLLPLNDTGHPLFRASTRENVEQFRRVLTEEGFVATIRTARGDEESSACGQLAT 579 PPL N V+MGMGEP++NPL V+R+ ++LT F A++++++STVGPSP+AIR ++PA LAWSVHAA DE+R+ LVPTT H M ELRD F VL KR R+ V V LI G+ND + A AL LLRP+ V+L+P ND G + + ++NV F+R L + GF +R RGD+ ++ACGQLAT Sbjct: 259 PPLHNIVFMGMGEPLNNPLHVMRATDILTRDKCFGFARSRVTVSTVGPSPAAIRAAGDLPAMLAWSVHAADDELRRRLVPTTAHTMEELRDTFKSVLSKRSRQMSTFMVAVTLIDGLNDGEEQADALVELLRPIQEVVKGLVVDLIPYNDIGEAAYERAGKDNVGAFQRRLRDAGFACFVRVTRGDDGNAACGQLAT 455
BLAST of mRNA_H-paniculata_contig14372.2629.1 vs. uniprot
Match: A0A7S0TZU8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TZU8_HEMAN) HSP 1 Score: 189 bits (481), Expect = 1.010e-54 Identity = 97/197 (49.24%), Postives = 132/197 (67.01%), Query Frame = 1 Query: 4 PPLTNAVYMGMGEPMDNPLAVLRSLEVLTHPHAFAMAKNKISLSTVGPSPSAIRKMSEMPARLAWSVHAATDEVRKMLVPTTVHLMTELRDAFAEVLEKRGREY--LFVEVVLIQGVNDSADAARALAALLRPLPTKSS---VNLLPLNDTGHPLFRASTRENVEQFRRVLTEEGFVATIRTARGDEESSACGQLAT 579 PPL N V+MGMGEP++NPL V+R+ ++LT F A++++++STVGPSP+AIR +MPA LAWSVHAA DE+R+ LVPTT H M ELRD F VL KR R+ V V LI +ND + A AL LLRP+ ++L+P ND G + + ++NV F+R L + GF +R RGD++++ACGQLAT Sbjct: 255 PPLHNIVFMGMGEPLNNPLNVMRATDILTQDKCFGFARSRVTVSTVGPSPAAIRAAGDMPAMLAWSVHAADDELRRKLVPTTAHSMEELRDTFKSVLSKRSRQMSTFMVAVTLIHDLNDGEEQADALVELLRPIQEVVKGLVIDLIPYNDIGEVAYERAGKDNVGAFQRRLRDAGFACFVRVTRGDDDNAACGQLAT 451
BLAST of mRNA_H-paniculata_contig14372.2629.1 vs. uniprot
Match: A0A2E6VQA8_9DELT (Radical SAM core domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VQA8_9DELT) HSP 1 Score: 181 bits (460), Expect = 8.630e-53 Identity = 92/192 (47.92%), Postives = 129/192 (67.19%), Query Frame = 1 Query: 4 PPLTNAVYMGMGEPMDNPLAVLRSLEVLTHPHAFAMAKNKISLSTVGPSPSAIRKMSEMPARLAWSVHAATDEVRKMLVPTTVHLMTELRDAFAEVLEKRGREYLFVEVVLIQGVNDSADAARALAALLRPLPTKSSVNLLPLNDTGHPLFRASTRENVEQFRRVLTEEGFVATIRTARGDEESSACGQLAT 579 PP N V+MGMGEP++N V +++ + HP FA+ +I+LSTVGPSPS I+K+ +P R+AWS+HAA D R+ LVPTT H + L DAFA+VL ++ +E LF+E+ LI VND + A L L+ LP +S VNL+P+N T F T E ++ FR +L E G+ ++R +RGDEE++ACGQL T Sbjct: 146 PPFRNIVFMGMGEPLNNFEEVKKAITQMVHPLTFAIGAKRITLSTVGPSPSLIQKLKTLPTRIAWSIHAAEDTKRQRLVPTTKHSIAALTDAFADVLHRK-KEGLFIELTLIDNVNDRDEDAHHLVTCLKRLPGESRVNLIPVNPTPGNSFAPPTPERIQSFRAILHEAGYFCSVRPSRGDEEAAACGQLIT 336
BLAST of mRNA_H-paniculata_contig14372.2629.1 vs. uniprot
Match: W7TTG9_9STRA (Radical SAM core domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTG9_9STRA) HSP 1 Score: 182 bits (463), Expect = 1.390e-51 Identity = 105/195 (53.85%), Postives = 130/195 (66.67%), Query Frame = 1 Query: 4 PPLTNAVYMGMGEPMDNPLAVLRSLEVLTHPHAFAMAKNKISLSTVGPSPSAIRKMSEMPA-RLAWSVHAATDEVRKMLVPTTVHLMTELRDAFAEVLEKRGREYLFVEVVLIQGVNDSADAARALAALLRPLP-TKSSVNLLPLNDTGHPLFRASTRENVEQFRR-VLTEEGFVATIRTARGDEESSACGQLAT 579 P L N V+MGMGEP++N AV +L +T PHAFA++ + I+LSTV PSP +R +MP RLAWSVH A D +R+ LVPTT M ELR+AF EV+ +RG Y+F+EV LI+GVNDS D A AL LLRP T VNL+P NDTG + S N+ F+ V T G++ RT RG EESSACGQLAT Sbjct: 306 PGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500
BLAST of mRNA_H-paniculata_contig14372.2629.1 vs. uniprot
Match: A0A0G4G3K1_9ALVE (Radical SAM core domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G3K1_9ALVE) HSP 1 Score: 182 bits (462), Expect = 1.650e-51 Identity = 98/197 (49.75%), Postives = 132/197 (67.01%), Query Frame = 1 Query: 4 PPLTNAVYMGMGEPMDNPLAVLRSLEVLTHPHAFAMAKNKISLSTVGPSPSAIRKMSEMPARLAWSVHAATDEVRKMLVPTTVHLMTELRDAFAEVLEKRGR-----EYLFVEVVLIQGVNDSADAARALAALLRPLPTKSSVNLLPLNDTGHPLFRASTRENVEQFRRVLTEEGFVATIRTARGDEESSACGQLAT 579 P L V+MGMGEPM+NP V ++E L F +K K++LSTVG SP++IR++ + P LAWS+HAA+DE R++LVPTT H ++EL AF EV+E R L VEV L+ G+ND + AR LA++L P+ + VNL+P NDTG R S+ E+V +F+R L EG A++R RGDEES+ACGQLAT Sbjct: 226 PRLERVVFMGMGEPMNNPKNVREAIEALVDEKRFKFSKRKVTLSTVGVSPASIRQLVDFPCVLAWSLHAASDEKRQLLVPTTRHGVSELSGAFLEVMEARKHLKGSLRLLMVEVALMAGLNDGEEDARLLASVLSPVKDRVLVNLIPYNDTGAEGLRRSSEESVRRFQRALWAEGLRASVRVTRGDEESAACGQLAT 422 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14372.2629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14372.2629.1 >prot_H-paniculata_contig14372.2629.1 ID=prot_H-paniculata_contig14372.2629.1|Name=mRNA_H-paniculata_contig14372.2629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp MGMGEPMDNPLAVLRSLEVLTHPHAFAMAKNKISLSTVGPSPSAIRKMSEback to top mRNA from alignment at H-paniculata_contig14372:4959..6597- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14372.2629.1 ID=mRNA_H-paniculata_contig14372.2629.1|Name=mRNA_H-paniculata_contig14372.2629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1639bp|location=Sequence derived from alignment at H-paniculata_contig14372:4959..6597- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14372:4959..6597- >mRNA_H-paniculata_contig14372.2629.1 ID=mRNA_H-paniculata_contig14372.2629.1|Name=mRNA_H-paniculata_contig14372.2629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig14372:4959..6597- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |