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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 2874 |
| Cds size | 2133 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14366.2625.1 >prot_H-paniculata_contig14366.2625.1 ID=prot_H-paniculata_contig14366.2625.1|Name=mRNA_H-paniculata_contig14366.2625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=711bp
MWIALPACCTAYQGVPLWSRPPSCDLLKREPPQGGTSSVQLPALALHAGI
SIRSRQAGSTSHLRAAAAESRQGKGGGAPSHVGPRGNNQIKGAEAQGHRA
ISRLIMARLKKAGEKRNWEQATDILIGALARHDADAVVDVCVYAAALNAA
AMCGKWKQALGTISVMKRKGVQPNVVAYSSAIKACAKSGRWKPAVELLSE
MRKEGLTPDAISYSSAITACGKGGQWERALSLLREMQREGVAPDVISYSS
AITACGKSGQSEQAVCLFREMQREGLRPNVISYSAAIAACRNGGHWEQAV
GLFREMQRAGISPDVSSYNSAIVACGDGGRWKQAIGLLREMQWEGLRPDV
ISFSSAMTACGNGGEQEQAMNLLREMQREGLKPDVISYSSAIAACDKSGR
WKQAMSLLKEMWKEGVTPNVVSYSSAIAACAKGGQWEEAMGLFREMQREG
ITPNVITYGAAIAACRNSAQWEQAVGLLREMQRMGVTPDVSSYNSAIAAC
GDGGRWKPAVDLLREMQREGLTPDVISYSLVITACGKGGESEQVMGLLKE
MRKEGVRPNVISFNSAITACGKSGKSEQAIGLLREMRRGGLRPDVISYSS
AITVCGNNGESEQAMGLLREMQKEGLTPDVISYSSAITACGDGGQWQQAV
DLLREMQREGLKPNVITYSSAITACGKGGQSEQALGLLKEMQREGLMPHV
GAYNAVIRAL* back to topmRNA from alignment at H-paniculata_contig14366:557..5209- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig14366.2625.1 ID=mRNA_H-paniculata_contig14366.2625.1|Name=mRNA_H-paniculata_contig14366.2625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4653bp|location=Sequence derived from alignment at H-paniculata_contig14366:557..5209- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGACAACAAGGGAGATATGTGGATTGCACTGCCGGCTTGCTGCACGGCG
TACCAGGGTGTGCCATTATGGTCCCGACCGCCTTCTTGTGATCTATTGAA
AAGAGAACCACCACAAGGTATGTATCGTGTAGGAATCCGTCAAGTGCACT
GCCTAAGCTTGAGGGGAAAAATCAAACATCTTGTGACCGCCCGACGGAGT
ACAGAGCCTGTATAGGCCTAGAATCAACTGGTACATAGCTCCCGTGATAG
CCCTGTGCCGCGTCATTCTTCTAGACATATGTCAAGTTTTGAATACATTT
CAATGTATTGTATGTCTTCATGAAGGTAAGGCAACGTGCTTGGGTAGGGT
ATGGTACGAATGAGGTCTCCTTTTTGTTCTAATAATATTTGAATTACTGA
CTCCATGTTCATTTGCCATCGTATTGAAGTTGAGCACTGGTGTATCACCT
AGATTCACTATAATGTTCAGACACTGTCATGTGTCTCCTCTTTATCGGTT
GGACTCAGAGATGATATACAGGATATTTTGCCAATTCCACACAGAAATAC
CCTAATACGTGGGTTTATCGCTTCAGATGGAAAGCACGTTACATTTATAG
TAGCACTTCGGCAGGCCCGATGGCCCTATTTCTATCTATTACACCTTTTG
TCTGTGACACAGGTTTATCTTAGCCTCCTCATGATTTGGTTGTCGGATGG
AACACAACAGTATTACTGGTTGATGTAACAACGAGGTTCGGTCGATTGCA
CGCGGTATACGGCAGGCGGCTGTTATGACTTGATTTTAGTGTACCGTACT
ACGCTACCTTGAACGCCGCAATGCGTCTCAACTCTGGGGAAACCTGTGCT
GCGGCACTTGCTCTACCGATTACCAACACTCAGTCTGTACTTCAAGTTAA
CTTCGAGAGAAAAATCAGGGCAATCTACTGTAAATTCACTGTTGATATAG
TACTACGGCCGTACATTTCACTGCAATCAATCCCCAACCTCTCGGATCGT
TGTATGCCTGGTCTGCCCTCATCCCCCAAGTTGACAACGTAGGAAAGAGC
GATTGACCGTCGGAAATCGCCTGATAGGGACAAATCTTCGGCCTTCCGAG
GCCACGTGATCAATGGTCTAACGACTGCGGCATGCAAAGCATGAGTACGC
CCCGCTTTCCCCACCAGTCCGTGTGAACGATAGAGGCGATTGTCTGTACT
GCAGCCTTCGCGCGATCCTAACAGTTTATGGCGCTAGGTACTGGTTCTGG
CTGCAATTTGCGCAGGAAGGCCCAGTCTCAACAGAAATAAGTTACAGGCA
CCGTAAAGAGCACACAAATCAACATGTTGGAAGCGCGGGATTTCTGGTGC
ACTGCTCCTATGATAGCCGTAAGGCAACAAACGGCGGTCACCAGTTTTGA
CTTATTTTCCCGAAACTTGCAACCCAACTTTCCTCTGCGGTGTGAATTTC
AGCGAGAATCCCAAGAACTGAAAATTGCACAAGAAGAAACGTGGGCAGTC
TAGAAATGGCTCTCAAGTTCAGTGCTTGGTAAATCCCAATAGATGCAGCT
AGTTGCACAGCGCGATGTGCTGCATCTGGTAGTTCTTACATTCAGCTGAC
CATATACACAGCAGGACAACCTCGGTTTGTCGATCGTATTCGCACGTCGG
GCAAACGCGTGCAGGAAGTGTCGTTCTAGTGGGCGAATAATTATGGGCAA
CGCAACCTCCTCTACTCACCCTCATCATCTATCATACTGTTGATTTATGT
TGTCCACGCCACCCCAGTGCCTTTGCTTTTCGTCCGCTTCCCTTCTTTAT
CGCCCTCTCGGCATTCATTGCTCCCCTCACGTTGACGTACGTATGTTGGC
CTTATACTCCTTCGCCCATGTTGCCCGCTCTACAATCGGCACAAAGGTGG
TACATCGTCAGTACAGCTACCAGCTCTAGCACTTCATGCTGGCATATCCA
TTCGGTCGCGTCAAGCCGGTAGTACTTCTCATTTGCGGGCCGCAGCAGCG
GAGAGCAGGCAAGGCAAGGGGGGTGGTGCGCCAAGCCATGTGGGTCCGCG
AGGAAATAATCAAATAAAGGGGGCGGAGGCCCAAGGTCATCGTGCTATTT
CCCGGTTGATCATGGCGCGATTGAAGAAAGCCGGGGAGAAGAGGAACTGG
GAGCAGGCGACAGACATCTTGATTGGCGCCCTCGCTCGACACGATGCTGA
CGCTGTTGTGGATGTTTGCGTCTACGCGGCAGCGTTGAATGCTGCGGCAA
TGTGTGGTAAATGGAAGCAGGCCCTTGGGACAATTTCTGTGATGAAGCGG
AAGGGCGTGCAGCCAAACGTCGTAGCATATAGCTCGGCAATTAAAGCGTG
TGCAAAAAGCGGGCGGTGGAAACCGGCCGTTGAGCTGTTAAGCGAGATGC
GGAAAGAGGGTCTCACGCCTGATGCCATCAGCTACAGCTCGGCAATCACA
GCGTGTGGAAAGGGTGGACAGTGGGAACGGGCCTTGAGTCTGTTGAGGGA
GATGCAGAGGGAGGGTGTCGCGCCCGATGTCATCAGCTACAGTTCGGCAA
TTACAGCGTGTGGAAAGAGTGGGCAATCCGAACAGGCCGTGTGTTTGTTT
AGGGAGATGCAGAGGGAAGGCCTCAGGCCCAACGTTATCAGCTACAGCGC
GGCAATCGCAGCGTGCAGAAACGGTGGACACTGGGAACAGGCCGTGGGTT
TGTTTAGGGAGATGCAAAGGGCGGGCATCTCGCCCGATGTCAGCAGCTAT
AACTCGGCAATCGTAGCGTGTGGAGACGGTGGGCGGTGGAAACAGGCCAT
AGGTCTGTTGCGGGAGATGCAGTGGGAGGGCCTCAGACCTGATGTCATCA
GTTTCAGTTCGGCAATGACGGCGTGCGGGAACGGCGGAGAGCAGGAGCAG
GCCATGAATCTTTTGAGGGAAATGCAGAGGGAGGGCCTCAAGCCTGATGT
CATCAGCTACAGCTCGGCAATCGCAGCGTGTGATAAAAGTGGGCGGTGGA
AACAGGCCATGAGTCTGTTGAAGGAGATGTGGAAGGAGGGTGTCACACCC
AATGTCGTTAGCTATAGCTCGGCAATCGCAGCGTGTGCAAAGGGTGGGCA
GTGGGAAGAAGCCATGGGTCTATTTAGAGAAATGCAGAGGGAGGGCATTA
CGCCCAATGTCATAACTTATGGCGCGGCAATCGCAGCGTGTCGAAATAGT
GCACAGTGGGAGCAGGCCGTGGGTCTATTGAGAGAAATGCAGAGGATGGG
TGTGACGCCTGACGTCAGCAGCTACAACTCCGCAATTGCAGCGTGTGGAG
ATGGTGGACGGTGGAAGCCGGCTGTGGATTTGTTGAGGGAGATGCAGAGG
GAGGGCCTTACGCCCGATGTCATCAGCTACAGCTTGGTGATCACGGCGTG
CGGAAAGGGTGGAGAGTCGGAACAGGTCATGGGTCTATTGAAGGAGATGA
GGAAGGAGGGTGTAAGGCCCAATGTCATCAGCTTCAATTCAGCAATCACG
GCATGTGGAAAGAGTGGAAAATCGGAACAGGCTATAGGTTTGTTAAGGGA
GATGCGGAGGGGGGGCCTTAGGCCCGACGTCATCAGCTATAGTTCGGCAA
TCACGGTGTGTGGGAATAACGGAGAATCAGAGCAGGCCATGGGTCTTTTG
AGAGAGATGCAGAAGGAGGGCCTCACGCCTGATGTCATTAGCTACAGCTC
GGCAATCACAGCATGCGGAGACGGCGGACAGTGGCAGCAGGCCGTGGATC
TATTGAGGGAGATGCAGAGAGAGGGCCTTAAGCCCAACGTCATCACCTAC
AGTTCGGCGATCACGGCGTGTGGAAAGGGTGGGCAGTCTGAACAGGCGTT
GGGTCTTTTAAAGGAGATGCAGAGGGAGGGCCTCATGCCCCATGTTGGCG
CCTACAACGCAGTGATCCGTGCCCTCTGAGTTGCGCGGTGCAGCCTCATC
GCAGCAGTAACTGTTGGACTGAACTGAGACGACGGGTATTATTATGACAA
CTGTTAAAAGGTAGTCATTTGGCACTGTGTTTGTTCGTTCGTTTCATCGT
CACAACGCTTCATACCCGAACACAGAAATATATACACACACACACACCAA
TGTATAGAGAGAAAGCTCTATATATGTATAGACCCCGGAATAGGAGACTA
GTTGTATATGTGATACGACAGGGACGTTTATATATTGTGAAGAAGCAAGG
GTCAGACTATGATGACATTCATTTGATGATGGATGAATTGCTGAAGGCTG
AATCCTTGAGGAGTTCTTCTGCTGCAACGGGGGGTAGACTTGAACCTAGA
AAGCGTCGTGTAACGATATAGAGGGAGGAAGGCGTCAAATGGGCCAATCA
TCCCACTTCTTCCTCGGATTTTCCACGTGGCGTCGCTTTTATGGAATAAG
CGGCATCTGCGAGTTGCATTACGTCCTCATTTTCTGGTGAAAACACCCAG
CCGAATGAAGGGATATCTTACAAAGATGTTGGAGGGGTATAATATGCTAA
TGTTCCCATCGGGAGAAAATCTGTCAACTTGCTCACCAAATCGGGGGGAT
TACTTAATAATTGTAACACTCTGAGTCCCCGTCGATGATTACCCAGCAGC
TCGGTGGTCAGCTATTGGGATTACAATATTATACCTTTTGCGTTGTATTG
TTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig14366:557..5209- >mRNA_H-paniculata_contig14366.2625.1 ID=mRNA_H-paniculata_contig14366.2625.1|Name=mRNA_H-paniculata_contig14366.2625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4266bp|location=Sequence derived from alignment at H-paniculata_contig14366:557..5209- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGGATTGCACTGCCGGCTTGCTGCACGGCGTACCAGGGTGTGCCATT
ATGGTCCCGACCGCCTTCTTGTGATCTATTGAAAAGAGAACCACCACAAG
ATGTGGATTGCACTGCCGGCTTGCTGCACGGCGTACCAGGGTGTGCCATT
ATGGTCCCGACCGCCTTCTTGTGATCTATTGAAAAGAGAACCACCACAAG
GTGGTACATCGTCAGTACAGCTACCAGCTCTAGCACTTCATGCTGGCATA
TCCATTCGGTCGCGTCAAGCCGGTAGTACTTCTCATTTGCGGGCCGCAGC
AGCGGAGAGCAGGCAAGGCAAGGGGGGTGGTGCGCCAAGCCATGTGGGTC
CGCGAGGAAATAATCAAATAAAGGGGGCGGAGGCCCAAGGTCATCGTGCT
ATTTCCCGGTTGATCATGGCGCGATTGAAGAAAGCCGGGGAGAAGAGGAA
CTGGGAGCAGGCGACAGACATCTTGATTGGCGCCCTCGCTCGACACGATG
CTGACGCTGTTGTGGATGTTTGCGTCTACGCGGCAGCGTTGAATGCTGCG
GCAATGTGTGGTAAATGGAAGCAGGCCCTTGGGACAATTTCTGTGATGAA
GCGGAAGGGCGTGCAGCCAAACGTCGTAGCATATAGCTCGGCAATTAAAG
CGTGTGCAAAAAGCGGGCGGTGGAAACCGGCCGTTGAGCTGTTAAGCGAG
ATGCGGAAAGAGGGTCTCACGCCTGATGCCATCAGCTACAGCTCGGCAAT
CACAGCGTGTGGAAAGGGTGGACAGTGGGAACGGGCCTTGAGTCTGTTGA
GGGAGATGCAGAGGGAGGGTGTCGCGCCCGATGTCATCAGCTACAGTTCG
GCAATTACAGCGTGTGGAAAGAGTGGGCAATCCGAACAGGCCGTGTGTTT
GTTTAGGGAGATGCAGAGGGAAGGCCTCAGGCCCAACGTTATCAGCTACA
GCGCGGCAATCGCAGCGTGCAGAAACGGTGGACACTGGGAACAGGCCGTG
GGTTTGTTTAGGGAGATGCAAAGGGCGGGCATCTCGCCCGATGTCAGCAG
CTATAACTCGGCAATCGTAGCGTGTGGAGACGGTGGGCGGTGGAAACAGG
CCATAGGTCTGTTGCGGGAGATGCAGTGGGAGGGCCTCAGACCTGATGTC
ATCAGTTTCAGTTCGGCAATGACGGCGTGCGGGAACGGCGGAGAGCAGGA
GCAGGCCATGAATCTTTTGAGGGAAATGCAGAGGGAGGGCCTCAAGCCTG
ATGTCATCAGCTACAGCTCGGCAATCGCAGCGTGTGATAAAAGTGGGCGG
TGGAAACAGGCCATGAGTCTGTTGAAGGAGATGTGGAAGGAGGGTGTCAC
ACCCAATGTCGTTAGCTATAGCTCGGCAATCGCAGCGTGTGCAAAGGGTG
GGCAGTGGGAAGAAGCCATGGGTCTATTTAGAGAAATGCAGAGGGAGGGC
ATTACGCCCAATGTCATAACTTATGGCGCGGCAATCGCAGCGTGTCGAAA
TAGTGCACAGTGGGAGCAGGCCGTGGGTCTATTGAGAGAAATGCAGAGGA
TGGGTGTGACGCCTGACGTCAGCAGCTACAACTCCGCAATTGCAGCGTGT
GGAGATGGTGGACGGTGGAAGCCGGCTGTGGATTTGTTGAGGGAGATGCA
GAGGGAGGGCCTTACGCCCGATGTCATCAGCTACAGCTTGGTGATCACGG
CGTGCGGAAAGGGTGGAGAGTCGGAACAGGTCATGGGTCTATTGAAGGAG
ATGAGGAAGGAGGGTGTAAGGCCCAATGTCATCAGCTTCAATTCAGCAAT
CACGGCATGTGGAAAGAGTGGAAAATCGGAACAGGCTATAGGTTTGTTAA
GGGAGATGCGGAGGGGGGGCCTTAGGCCCGACGTCATCAGCTATAGTTCG
GCAATCACGGTGTGTGGGAATAACGGAGAATCAGAGCAGGCCATGGGTCT
TTTGAGAGAGATGCAGAAGGAGGGCCTCACGCCTGATGTCATTAGCTACA
GCTCGGCAATCACAGCATGCGGAGACGGCGGACAGTGGCAGCAGGCCGTG
GATCTATTGAGGGAGATGCAGAGAGAGGGCCTTAAGCCCAACGTCATCAC
CTACAGTTCGGCGATCACGGCGTGTGGAAAGGGTGGGCAGTCTGAACAGG
CGTTGGGTCTTTTAAAGGAGATGCAGAGGGAGGGCCTCATGCCCCATGTT
GGCGCCTACAACGCAGTGATCCGTGCCCTCTGAGTGGTACATCGTCAGTA
CAGCTACCAGCTCTAGCACTTCATGCTGGCATATCCATTCGGTCGCGTCA
AGCCGGTAGTACTTCTCATTTGCGGGCCGCAGCAGCGGAGAGCAGGCAAG
GCAAGGGGGGTGGTGCGCCAAGCCATGTGGGTCCGCGAGGAAATAATCAA
ATAAAGGGGGCGGAGGCCCAAGGTCATCGTGCTATTTCCCGGTTGATCAT
GGCGCGATTGAAGAAAGCCGGGGAGAAGAGGAACTGGGAGCAGGCGACAG
ACATCTTGATTGGCGCCCTCGCTCGACACGATGCTGACGCTGTTGTGGAT
GTTTGCGTCTACGCGGCAGCGTTGAATGCTGCGGCAATGTGTGGTAAATG
GAAGCAGGCCCTTGGGACAATTTCTGTGATGAAGCGGAAGGGCGTGCAGC
CAAACGTCGTAGCATATAGCTCGGCAATTAAAGCGTGTGCAAAAAGCGGG
CGGTGGAAACCGGCCGTTGAGCTGTTAAGCGAGATGCGGAAAGAGGGTCT
CACGCCTGATGCCATCAGCTACAGCTCGGCAATCACAGCGTGTGGAAAGG
GTGGACAGTGGGAACGGGCCTTGAGTCTGTTGAGGGAGATGCAGAGGGAG
GGTGTCGCGCCCGATGTCATCAGCTACAGTTCGGCAATTACAGCGTGTGG
AAAGAGTGGGCAATCCGAACAGGCCGTGTGTTTGTTTAGGGAGATGCAGA
GGGAAGGCCTCAGGCCCAACGTTATCAGCTACAGCGCGGCAATCGCAGCG
TGCAGAAACGGTGGACACTGGGAACAGGCCGTGGGTTTGTTTAGGGAGAT
GCAAAGGGCGGGCATCTCGCCCGATGTCAGCAGCTATAACTCGGCAATCG
TAGCGTGTGGAGACGGTGGGCGGTGGAAACAGGCCATAGGTCTGTTGCGG
GAGATGCAGTGGGAGGGCCTCAGACCTGATGTCATCAGTTTCAGTTCGGC
AATGACGGCGTGCGGGAACGGCGGAGAGCAGGAGCAGGCCATGAATCTTT
TGAGGGAAATGCAGAGGGAGGGCCTCAAGCCTGATGTCATCAGCTACAGC
TCGGCAATCGCAGCGTGTGATAAAAGTGGGCGGTGGAAACAGGCCATGAG
TCTGTTGAAGGAGATGTGGAAGGAGGGTGTCACACCCAATGTCGTTAGCT
ATAGCTCGGCAATCGCAGCGTGTGCAAAGGGTGGGCAGTGGGAAGAAGCC
ATGGGTCTATTTAGAGAAATGCAGAGGGAGGGCATTACGCCCAATGTCAT
AACTTATGGCGCGGCAATCGCAGCGTGTCGAAATAGTGCACAGTGGGAGC
AGGCCGTGGGTCTATTGAGAGAAATGCAGAGGATGGGTGTGACGCCTGAC
GTCAGCAGCTACAACTCCGCAATTGCAGCGTGTGGAGATGGTGGACGGTG
GAAGCCGGCTGTGGATTTGTTGAGGGAGATGCAGAGGGAGGGCCTTACGC
CCGATGTCATCAGCTACAGCTTGGTGATCACGGCGTGCGGAAAGGGTGGA
GAGTCGGAACAGGTCATGGGTCTATTGAAGGAGATGAGGAAGGAGGGTGT
AAGGCCCAATGTCATCAGCTTCAATTCAGCAATCACGGCATGTGGAAAGA
GTGGAAAATCGGAACAGGCTATAGGTTTGTTAAGGGAGATGCGGAGGGGG
GGCCTTAGGCCCGACGTCATCAGCTATAGTTCGGCAATCACGGTGTGTGG
GAATAACGGAGAATCAGAGCAGGCCATGGGTCTTTTGAGAGAGATGCAGA
AGGAGGGCCTCACGCCTGATGTCATTAGCTACAGCTCGGCAATCACAGCA
TGCGGAGACGGCGGACAGTGGCAGCAGGCCGTGGATCTATTGAGGGAGAT
GCAGAGAGAGGGCCTTAAGCCCAACGTCATCACCTACAGTTCGGCGATCA
CGGCGTGTGGAAAGGGTGGGCAGTCTGAACAGGCGTTGGGTCTTTTAAAG
GAGATGCAGAGGGAGGGCCTCATGCCCCATGTTGGCGCCTACAACGCAGT
GATCCGTGCCCTCTGA back to top
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