mRNA_H-paniculata_contig14362.2624.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14362.2624.1
Unique NamemRNA_H-paniculata_contig14362.2624.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14362.2624.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 428 bits (1101), Expect = 8.150e-141
Identity = 233/356 (65.45%), Postives = 266/356 (74.72%), Query Frame = 1
Query:  166 ALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSG--TCFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPA-TAKESSSKKSAIDFSADGDESDEGFMYATTHNGKEVKVNTAGAT------------------------------------------LLVDTGATETMLDDRLIPGLKEIMQEYKQLVKPKAIT 1098
            +LSVQKHEDD++ISGDGQAAF+ELNLNYNKVTDEVIRATMEEL+NTPMEP QNPDDYFNQKHLLRHK +KMGETISD YF D CVTGFT+EYKDVKMIMYRDPDFNVD+MQTTMRHMFLDEQSR G KG IAGRGFAM  TTS   TCF+CGE GHI RNC  KRGKG+ ++TKPAGAAKWCSVHFTT+HSDEEC+EQGA RP+KS++TGKA SAC       S S K   A T +E+SS ++ IDFSA+G ES+EGFMYA  H G+++K    GAT                                          LL+DTGA+E MLDD LIPGLKEIM+E+K+L KPK ++
Sbjct:   77 SLSVQKHEDDSKISGDGQAAFQELNLNYNKVTDEVIRATMEELINTPMEPRQNPDDYFNQKHLLRHKAEKMGETISDCYFNDECVTGFTNEYKDVKMIMYRDPDFNVDKMQTTMRHMFLDEQSRNGPKGSIAGRGFAMTATTSEEPTCFDCGEKGHIWRNCSEKRGKGK-KKTKPAGAAKWCSVHFTTRHSDEECFEQGATRPKKSSNTGKALSACASCTHCFSTSNKTELAMTKQEASSTQAEIDFSAEG-ESEEGFMYAIVHKGEDLKPMATGATPLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLIDTGASENMLDDCLIPGLKEIMREHKELAKPKVVS 430          
BLAST of mRNA_H-paniculata_contig14362.2624.1 vs. uniprot
Match: D7G6Q1_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q1_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 2.290e-122
Identity = 190/260 (73.08%), Postives = 208/260 (80.00%), Query Frame = 1
Query:  283 MEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSG--TCFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSN-DTGKAFSACTHXXXXSSASYKKGPATAKESSSKKSAIDFSADGDESDEGFMYATTHNGKEVKVNTAGATLLVDTGATETMLDDRLIPGLKE 1053
            ME+L NT MEPGQNPDDYFN KHLLRHKV+KMGE ISDRYFKD+CVTGFT EYK+VKMIM+RDP+FNV+ MQTTM HM LDEQSRKGSKGGIAGRGF M TT S   TCF CGE GHIRRNC ++RGKGR ++TKPAGA KWC  HFTTK+SDEECY QGAKRP      T KAFSAC H    SS S +K   TAKE+SS K+AID S DGDESDEGFMYATT  G EV+ N  G TLLV+ GATETM DDRLIP LK+
Sbjct:    1 MEKLDNTSMEPGQNPDDYFNHKHLLRHKVEKMGEKISDRYFKDMCVTGFTHEYKNVKMIMHRDPNFNVNHMQTTMHHMALDEQSRKGSKGGIAGRGFPMVTTASEQETCFGCGEKGHIRRNCLQRRGKGRQRKTKPAGATKWCCFHFTTKNSDEECYGQGAKRPITDQISTDKAFSACAHCAHFSSTSDRKELTTAKEASSTKAAIDSSTDGDESDEGFMYATTRTGMEVEANAEGVTLLVEIGATETMRDDRLIPHLKD 260          
BLAST of mRNA_H-paniculata_contig14362.2624.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 6.580e-108
Identity = 184/313 (58.79%), Postives = 229/313 (73.16%), Query Frame = 1
Query:  166 ALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPATAKESSSKKSAIDFSADGDESDEGFMYATTH--NGKEVKVNTAGATLLVDTGATETMLDDRLIPGLKEIMQEYKQLVKPKAI 1095
            ALS+QKHEDD  ISGDGQAAF EL  NY++VTDEVIRA MEEL N PM PG+NPDDYFNQKHLLR ++ KMGE ISDR FKDICV GF+DEYKDVK++++RDP FNV  M +TMR++FLDEQSRKG KG IAGRGFAMATT S   C  C E GHIRRNCP+ + + + ++TKPAGA KWCS H TT HSDEECY+QG KRPE + D+ K F+AC++    SSAS K       +S+++ + +DF+ D D  D GFM+AT    +G+    ++ G  L+VD+ A+ETM D+RLIP     + +Y Q   PK +
Sbjct:  117 ALSIQKHEDDTGISGDGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAK-KKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSNKVFTACSNCTHCSSASKKD------DSNNEVAVVDFTRDEDAFDSGFMFATCSRISGRNFAASSTGVRLVVDSEASETMFDNRLIPDGN--LHDYTQRNSPKIV 420          
BLAST of mRNA_H-paniculata_contig14362.2624.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 8.960e-108
Identity = 184/304 (60.53%), Postives = 225/304 (74.01%), Query Frame = 1
Query:  166 ALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPAT---AKESSSKKSAIDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1044
            AL+V KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   + K   T    +   ++K+ IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM DDRLIP 
Sbjct:   97 ALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDTHAKPTTTETPTETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIPN 397          
BLAST of mRNA_H-paniculata_contig14362.2624.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 3.480e-107
Identity = 184/304 (60.53%), Postives = 225/304 (74.01%), Query Frame = 1
Query:  166 ALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPATAKESSSK------KSAIDFSADGDESDEGFMY---ATTHNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1044
            AL+V KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTHXXXX + S        K  + K      K+ +DFS D D    GFMY    +  +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:   97 ALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHXXXXXTQSRDTHAKPTKRETPKETEKTEKAEVDFSYDEDTFKGGFMYHAICSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 397          
BLAST of mRNA_H-paniculata_contig14362.2624.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 1.590e-104
Identity = 186/304 (61.18%), Postives = 225/304 (74.01%), Query Frame = 1
Query:  166 ALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS--YKKGPATA---KESSSKKSA-IDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1044
            AL+V KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   +  P T    KE+   + A IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM DDRLIP 
Sbjct:   97 ALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIPN 397          
BLAST of mRNA_H-paniculata_contig14362.2624.1 vs. uniprot
Match: A0A6H5JC59_9PHAE (gag_pre-integrs domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC59_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 4.880e-104
Identity = 188/304 (61.84%), Postives = 229/304 (75.33%), Query Frame = 1
Query:  166 ALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGTC-FECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPATA--KE-SSSKKSAIDFSADGDESDEGFMYATTHN---GKEVKVNTAGATLLVDTGATETMLDDRLIPG 1044
            AL+V KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG   FEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTHXXXXS+ S   + K   T   KE   ++K+ IDFS D D    GFMY  T +   G+       G + LVD+GA+ETM D+RLIP 
Sbjct:   97 ALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPIYFECNEQGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHXXXXSTQSRDTHSKPTTTETPKEIEKTEKAEIDFSYDEDAFKGGFMYHATCSKAGGRTFTTTATGTSALVDSGASETMFDNRLIPN 397          
BLAST of mRNA_H-paniculata_contig14362.2624.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 9.250e-104
Identity = 185/304 (60.86%), Postives = 225/304 (74.01%), Query Frame = 1
Query:  166 ALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS--YKKGPATA---KESSSKKSA-IDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1044
            AL+V KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   +  P T    KE+   + A IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:   97 ALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 397          
BLAST of mRNA_H-paniculata_contig14362.2624.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 1.820e-102
Identity = 182/304 (59.87%), Postives = 225/304 (74.01%), Query Frame = 1
Query:  166 ALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPATA--KESS-SKKSAIDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1044
            AL+V KHEDD  + GDGQAAF EL  NYN++TDE IRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   + K   T   KE+  ++K+ IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:  116 ALTVHKHEDDTGLCGDGQAAFAELKANYNRLTDEAIRAELDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIHAKPTTTEIPKETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 416          
BLAST of mRNA_H-paniculata_contig14362.2624.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 2.210e-102
Identity = 177/314 (56.37%), Postives = 221/314 (70.38%), Query Frame = 1
Query:  166 ALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHM-FLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPATAKESSSKKSAIDFSADGDESDEGFMYATTHNGKE--VKVNTAGATLLVDTGATETMLDDRLIPGLKEIMQEYKQLVKPKAI 1095
            ALS+QKHEDD  ISGDGQAAF EL  NY++VTDEVIRA MEEL N PM PG+NPDDYFNQKHL+R ++ KMGE ISDR  KDI V GF+DEY+DVK++++RDP FN   MQ+T+R+  + +EQSRKG KG IAGRGFAMATT S   C  C E GHIRRNCP+ + + + ++TKPAGA KWC  H TT HSDEECY+QG KRPE + D+ KAF+AC+     SSA  K       +S+++ +  DF+ D D  D GFM+ T     E     ++ G+ LLVDTGA+ETM D+RLIP     + +Y Q   PK +
Sbjct:   57 ALSIQKHEDDTGISGDGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLIRAQLDKMGEPISDRRCKDIWVQGFSDEYRDVKLMVFRDPTFNALGMQSTIRNTSWTNEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAK-KKTKPAGATKWCCKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSDCTHCSSAPNKN------DSNNEVAVADFTRDEDAFDSGFMFGTCSRISERNFAASSTGSILLVDTGASETMFDNRLIPDGN--LHDYTQRNSPKIV 361          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14362.2624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW66_9PHAE8.150e-14165.45CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6Q1_ECTSI2.290e-12273.08CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L580_9PHAE6.580e-10858.79CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJB9_9PHAE8.960e-10860.53Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5KN28_9PHAE3.480e-10760.53Uncharacterized protein (Fragment) n=3 Tax=Ectocar... [more]
A0A6H5K3T5_9PHAE1.590e-10461.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC59_9PHAE4.880e-10461.84gag_pre-integrs domain-containing protein (Fragmen... [more]
A0A6H5L1Z9_9PHAE9.250e-10460.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUN9_9PHAE1.820e-10259.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXR7_9PHAE2.210e-10256.37CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14362contigH-paniculata_contig14362:4303..6222 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1102
Cds size1098
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929142.529527-CDS-H-paniculata_contig14362:4304..52391622929142.529527-CDS-H-paniculata_contig14362:4304..5239Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14362 4305..5239 -
1691480747.7690682-CDS-H-paniculata_contig14362:4304..52391691480747.7690682-CDS-H-paniculata_contig14362:4304..5239Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14362 4305..5239 -
1622929142.548144-CDS-H-paniculata_contig14362:6059..62221622929142.548144-CDS-H-paniculata_contig14362:6059..6222Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14362 6060..6222 -
1691480747.778379-CDS-H-paniculata_contig14362:6059..62221691480747.778379-CDS-H-paniculata_contig14362:6059..6222Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14362 6060..6222 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14362.2624.1prot_H-paniculata_contig14362.2624.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14362 4305..6222 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14362.2624.1

>prot_H-paniculata_contig14362.2624.1 ID=prot_H-paniculata_contig14362.2624.1|Name=mRNA_H-paniculata_contig14362.2624.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=366bp
GQDDEFSNRAFQVHQTFVLPTAAKVQDGRFNFRFGDQQEDTGSSQDRRAR
LRKTTALSVQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVN
TPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDV
KMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT
CFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYE
QGAKRPEKSNDTGKAFSACTHCTHCSSASYKKGPATAKESSSKKSAIDFS
ADGDESDEGFMYATTHNGKEVKVNTAGATLLVDTGATETMLDDRLIPGLK
EIMQEYKQLVKPKAIT
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mRNA from alignment at H-paniculata_contig14362:4303..6222-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14362.2624.1 ID=mRNA_H-paniculata_contig14362.2624.1|Name=mRNA_H-paniculata_contig14362.2624.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1920bp|location=Sequence derived from alignment at H-paniculata_contig14362:4303..6222- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGACAAGACGACGAGTTTAGCAACCGGGCCTTCCAGGTACACCAGACTTT TGTACTTCCGACAGCAGCGAAGGTTCAGGACGGACGGTTCAACTTTCGGT TCGGAGATCAACAAGAAGATACGGGGTCGAGTCAGGACAGACGAGCTCGA CTCAGGAAGACAAGTAAGAGGAATACGGTCTCACGCACACACACAGGACC TTCACAACGCACACCTAATCTGGTAGTGGAAGGAGCTCCTTTAGTGCTGT AGTCACCAACACTTCGCTTGGAGAAAAAGGCTCGCAAATCGAGCAAAGGA CTGCTGTATCGACAGCAGGGAGGACTGCTGTATCGACAGCAGGGACGGCC CACACCGCAGTCCTATACACCCATCCGCGAGGAGAGGGTAACAGGAGCGA GGCCGGGAAAAAGACGACCTACAACCGTAGTCCTATACACCGATCCGAGA GGAGAGGGTAGCAGGAACGGGGTCGGAACGGTCCACACCGTAGTCCTATA CACCCATCCGCGAGGAGAGGGTAACAGGAGCGGGGTCGGGAAAAGACGAC CTCAACCGTAGTCCTTTACACAGGAATGGGGTCGGGAAGCCTCGGGCTCA CACCACGAGCAAACAACTCCTACGACAGGAGGGATCGCCGCGACAGCAGG AAACACCAGCATCAGCCTGTACACCACAAGGCAACAGGAGCGCATCGCGA TAGGAAAGGCACATCAAGATGGGTGATAATCCCCCCGTCGACAACACCAC TAACCTCGCCAACACCATTCGAGGCCTGAAGAAGTTCGATGGAAGGAACC CAGCCGAATTCAAAGGTTGGATGAAGAAACTCTGCGTCGTCCTGGGAGTT ACACGCAGGGACATTCTCCCGCTGCTTAAAGACGAACGCAGGCCTGCCCA AACGGATACTGCTGCCTACGCCGCCTACTGCAAGTCGAACGAGGACTTGT ACGCCATACTCTACTTGCTAGTGGAACTACCAGCGGCCCTTTCGGTGCAG AAGCACGAGGATGACAACGAGATCAGCGGAGACGGACAGGCGGCCTTCAG GGAACTGAACCTGAACTACAACAAGGTTACGGACGAAGTGATTCGAGCCA CCATGGAGGAGCTGGTCAACACGCCCATGGAGCCAGGACAGAACCCGGAC GACTACTTCAATCAGAAGCACCTCCTTCGACACAAGGTCCAGAAGATGGG GGAGACCATCTCGGACCGCTACTTCAAGGATATATGCGTCACAGGATTCA CCGACGAGTACAAGGACGTGAAGATGATCATGTACCGCGACCCAGACTTT AACGTCGACCAGATGCAGACCACCATGCGGCACATGTTTCTGGACGAACA ATCTCGCAAAGGATCCAAAGGTGGCATTGCCGGCCGCGGCTTCGCCATGG CCACAACCACATCGGGGACCTGTTTCGAATGCGGCGAGAATGGACACATC CGCAGGAACTGCCCCCGAAAGAGAGGCAAGGGAAGAATGCAGAGGACCAA GCCGGCGGGAGCCGCCAAGTGGTGCTCCGTTCACTTCACGACCAAACACT CCGACGAAGAATGCTACGAGCAAGGAGCGAAGCGGCCGGAAAAATCGAAC GACACGGGCAAGGCTTTCTCGGCATGTACGCACTGCACGCACTGCTCTTC AGCTAGCTACAAGAAGGGGCCAGCCACTGCGAAGGAGTCGAGCAGCAAGA AATCCGCAATCGACTTTAGTGCGGACGGCGACGAGTCCGATGAAGGATTC ATGTACGCCACCACTCATAACGGCAAGGAAGTCAAAGTCAACACTGCAGG AGCCACCCTACTTGTAGACACCGGCGCAACAGAGACCATGCTCGACGACC GCCTCATCCCAGGCCTGAAGGAGATCATGCAAGAGTACAAGCAACTCGTG AAGCCGAAGGCCATCACGGT
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Coding sequence (CDS) from alignment at H-paniculata_contig14362:4303..6222-

>mRNA_H-paniculata_contig14362.2624.1 ID=mRNA_H-paniculata_contig14362.2624.1|Name=mRNA_H-paniculata_contig14362.2624.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2196bp|location=Sequence derived from alignment at H-paniculata_contig14362:4303..6222- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGACAAGACGACGAGTTTAGCAACCGGGCCTTCCAGGTACACCAGACTTT
TGTACTTCCGACAGCAGCGAAGGTTCAGGACGGACGGTTCAACTTTCGGT
TCGGAGATCAACAAGAAGATACGGGGTCGAGTCAGGACAGACGAGCTCGA
CTCAGGAAGACAAGGACAAGACGACGAGTTTAGCAACCGGGCCTTCCAGG
TACACCAGACTTTTGTACTTCCGACAGCAGCGAAGGTTCAGGACGGACGG
TTCAACTTTCGGTTCGGAGATCAACAAGAAGATACGGGGTCGAGTCAGGA
CAGACGAGCTCGACTCAGGAAGACAACGGCCCTTTCGGTGCAGAAGCACG
AGGATGACAACGAGATCAGCGGAGACGGACAGGCGGCCTTCAGGGAACTG
AACCTGAACTACAACAAGGTTACGGACGAAGTGATTCGAGCCACCATGGA
GGAGCTGGTCAACACGCCCATGGAGCCAGGACAGAACCCGGACGACTACT
TCAATCAGAAGCACCTCCTTCGACACAAGGTCCAGAAGATGGGGGAGACC
ATCTCGGACCGCTACTTCAAGGATATATGCGTCACAGGATTCACCGACGA
GTACAAGGACGTGAAGATGATCATGTACCGCGACCCAGACTTTAACGTCG
ACCAGATGCAGACCACCATGCGGCACATGTTTCTGGACGAACAATCTCGC
AAAGGATCCAAAGGTGGCATTGCCGGCCGCGGCTTCGCCATGGCCACAAC
CACATCGGGGACCTGTTTCGAATGCGGCGAGAATGGACACATCCGCAGGA
ACTGCCCCCGAAAGAGAGGCAAGGGAAGAATGCAGAGGACCAAGCCGGCG
GGAGCCGCCAAGTGGTGCTCCGTTCACTTCACGACCAAACACTCCGACGA
AGAATGCTACGAGCAAGGAGCGAAGCGGCCGGAAAAATCGAACGACACGG
GCAAGGCTTTCTCGGCATGTACGCACTGCACGCACTGCTCTTCAGCTAGC
TACAAGAAGGGGCCAGCCACTGCGAAGGAGTCGAGCAGCAAGAAATCCGC
AATCGACTTTAGTGCGGACGGCGACGAGTCCGATGAAGGATTCATGTACG
CCACCACTCATAACGGCAAGGAAGTCAAAGTCAACACTGCAGGAGCCACC
CTACTTGTAGACACCGGCGCAACAGAGACCATGCTCGACGACCGCCTCAT
CCCAGGCCTGAAGGAGATCATGCAAGAGTACAAGCAACTCGTGAAGCCGA
AGGCCATCACGCGGCCCTTTCGGTGCAGAAGCACGAGGATGACAACGAGA
TCAGCGGAGACGGACAGGCGGCCTTCAGGGAACTGAACCTGAACTACAAC
AAGGTTACGGACGAAGTGATTCGAGCCACCATGGAGGAGCTGGTCAACAC
GCCCATGGAGCCAGGACAGAACCCGGACGACTACTTCAATCAGAAGCACC
TCCTTCGACACAAGGTCCAGAAGATGGGGGAGACCATCTCGGACCGCTAC
TTCAAGGATATATGCGTCACAGGATTCACCGACGAGTACAAGGACGTGAA
GATGATCATGTACCGCGACCCAGACTTTAACGTCGACCAGATGCAGACCA
CCATGCGGCACATGTTTCTGGACGAACAATCTCGCAAAGGATCCAAAGGT
GGCATTGCCGGCCGCGGCTTCGCCATGGCCACAACCACATCGGGGACCTG
TTTCGAATGCGGCGAGAATGGACACATCCGCAGGAACTGCCCCCGAAAGA
GAGGCAAGGGAAGAATGCAGAGGACCAAGCCGGCGGGAGCCGCCAAGTGG
TGCTCCGTTCACTTCACGACCAAACACTCCGACGAAGAATGCTACGAGCA
AGGAGCGAAGCGGCCGGAAAAATCGAACGACACGGGCAAGGCTTTCTCGG
CATGTACGCACTGCACGCACTGCTCTTCAGCTAGCTACAAGAAGGGGCCA
GCCACTGCGAAGGAGTCGAGCAGCAAGAAATCCGCAATCGACTTTAGTGC
GGACGGCGACGAGTCCGATGAAGGATTCATGTACGCCACCACTCATAACG
GCAAGGAAGTCAAAGTCAACACTGCAGGAGCCACCCTACTTGTAGACACC
GGCGCAACAGAGACCATGCTCGACGACCGCCTCATCCCAGGCCTGAAGGA
GATCATGCAAGAGTACAAGCAACTCGTGAAGCCGAAGGCCATCACG
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