mRNA_H-paniculata_contig14361.2623.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14361.2623.1
Unique NamemRNA_H-paniculata_contig14361.2623.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14361.2623.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 412 bits (1059), Expect = 1.300e-134
Identity = 226/352 (64.20%), Postives = 258/352 (73.30%), Query Frame = 1
Query:  163 QKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELINTPMEPGQNPDD*FNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIIYRDPDFNVDQMQTTTRHMFLDEQSRKGS*GGIAGRGFAMVTTRSG--TCFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPA-TAKESSSKKSAIDFSADGDESDEGFMYATTHNGKEVKVNTAGAT------------------------------------------LLVDTGATETMLDDRLIPGLKEIMQEYKQLVKPKAIT 1083
            QKHEDD++ISGDGQAAF+ELNLNYNKVTDEVIRATMEELINTPMEP QNPDD FNQKHLLRHK +KMGETISD YF D CVTGFT+EYKDVKMI+YRDPDFNVD+MQTT RHMFLDEQSR G  G IAGRGFAM  T S   TCF+CGE GHI RNC  KRGKG+ ++TKPAGAAKWCSVHFTT+HSDEEC+EQGA RP+KS++TGKA SAC       S S K   A T +E+SS ++ IDFSA+G ES+EGFMYA  H G+++K    GAT                                          LL+DTGA+E MLDD LIPGLKEIM+E+K+L KPK ++
Sbjct:   81 QKHEDDSKISGDGQAAFQELNLNYNKVTDEVIRATMEELINTPMEPRQNPDDYFNQKHLLRHKAEKMGETISDCYFNDECVTGFTNEYKDVKMIMYRDPDFNVDKMQTTMRHMFLDEQSRNGPKGSIAGRGFAMTATTSEEPTCFDCGEKGHIWRNCSEKRGKGK-KKTKPAGAAKWCSVHFTTRHSDEECFEQGATRPKKSSNTGKALSACASCTHCFSTSNKTELAMTKQEASSTQAEIDFSAEG-ESEEGFMYAIVHKGEDLKPMATGATPLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLIDTGASENMLDDCLIPGLKEIMREHKELAKPKVVS 430          
BLAST of mRNA_H-paniculata_contig14361.2623.1 vs. uniprot
Match: D7G6Q1_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q1_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 2.070e-119
Identity = 187/260 (71.92%), Postives = 206/260 (79.23%), Query Frame = 1
Query:  268 MEELINTPMEPGQNPDD*FNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIIYRDPDFNVDQMQTTTRHMFLDEQSRKGS*GGIAGRGFAMVTTRSG--TCFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSN-DTGKAFSACTHXXXXSSASYKKGPATAKESSSKKSAIDFSADGDESDEGFMYATTHNGKEVKVNTAGATLLVDTGATETMLDDRLIPGLKE 1038
            ME+L NT MEPGQNPDD FN KHLLRHKV+KMGE ISDRYFKD+CVTGFT EYK+VKMI++RDP+FNV+ MQTT  HM LDEQSRKGS GGIAGRGF MVTT S   TCF CGE GHIRRNC ++RGKGR ++TKPAGA KWC  HFTTK+SDEECY QGAKRP      T KAFSAC H    SS S +K   TAKE+SS K+AID S DGDESDEGFMYATT  G EV+ N  G TLLV+ GATETM DDRLIP LK+
Sbjct:    1 MEKLDNTSMEPGQNPDDYFNHKHLLRHKVEKMGEKISDRYFKDMCVTGFTHEYKNVKMIMHRDPNFNVNHMQTTMHHMALDEQSRKGSKGGIAGRGFPMVTTASEQETCFGCGEKGHIRRNCLQRRGKGRQRKTKPAGATKWCCFHFTTKNSDEECYGQGAKRPITDQISTDKAFSACAHCAHFSSTSDRKELTTAKEASSTKAAIDSSTDGDESDEGFMYATTRTGMEVEANAEGVTLLVEIGATETMRDDRLIPHLKD 260          
BLAST of mRNA_H-paniculata_contig14361.2623.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 2.360e-102
Identity = 177/299 (59.20%), Postives = 216/299 (72.24%), Query Frame = 1
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELINTPMEPGQNPDD*FNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIIYRDPDFNVDQMQTTTRHMFLDEQSRKGS*GGIAGRGFAMVTTRSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPAT---AKESSSKKSAIDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ T R++FLDEQ RK + G IAGRGFAM T  SG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   + K   T    +   ++K+ IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM DDRLIP 
Sbjct:  102 KHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDTHAKPTTTETPTETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIPN 397          
BLAST of mRNA_H-paniculata_contig14361.2623.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 3.540e-102
Identity = 177/309 (57.28%), Postives = 221/309 (71.52%), Query Frame = 1
Query:  163 QKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELINTPMEPGQNPDD*FNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIIYRDPDFNVDQMQTTTRHMFLDEQSRKGS*GGIAGRGFAMVTTRSGT-CFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPATAKESSSKKSAIDFSADGDESDEGFMYATTH--NGKEVKVNTAGATLLVDTGATETMLDDRLIPGLKEIMQEYKQLVKPKAI 1080
            QKHEDD  ISGDGQAAF EL  NY++VTDEVIRA MEEL N PM PG+NPDD FNQKHLLR ++ KMGE ISDR FKDICV GF+DEYKDVK++++RDP FNV  M +T R++FLDEQSRKG  G IAGRGFAM TT S   C  C E GHIRRNCP+ + + + ++TKPAGA KWCS H TT HSDEECY+QG KRPE + D+ K F+AC++    SSAS K       +S+++ + +DF+ D D  D GFM+AT    +G+    ++ G  L+VD+ A+ETM D+RLIP     + +Y Q   PK +
Sbjct:  121 QKHEDDTGISGDGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAK-KKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSNKVFTACSNCTHCSSASKKD------DSNNEVAVVDFTRDEDAFDSGFMFATCSRISGRNFAASSTGVRLVVDSEASETMFDNRLIPDGN--LHDYTQRNSPKIV 420          
BLAST of mRNA_H-paniculata_contig14361.2623.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 9.870e-102
Identity = 177/299 (59.20%), Postives = 216/299 (72.24%), Query Frame = 1
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELINTPMEPGQNPDD*FNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIIYRDPDFNVDQMQTTTRHMFLDEQSRKGS*GGIAGRGFAMVTTRSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPATAKESSSK------KSAIDFSADGDESDEGFMY---ATTHNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ T R++FLDEQ RK + G IAGRGFAM T  SG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTHXXXX + S        K  + K      K+ +DFS D D    GFMY    +  +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:  102 KHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHXXXXXTQSRDTHAKPTKRETPKETEKTEKAEVDFSYDEDTFKGGFMYHAICSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 397          
BLAST of mRNA_H-paniculata_contig14361.2623.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 2.980e-99
Identity = 179/299 (59.87%), Postives = 216/299 (72.24%), Query Frame = 1
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELINTPMEPGQNPDD*FNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIIYRDPDFNVDQMQTTTRHMFLDEQSRKGS*GGIAGRGFAMVTTRSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS--YKKGPATA---KESSSKKSA-IDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ T R++FLDEQ RK + G IAGRGFAM T  SG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   +  P T    KE+   + A IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM DDRLIP 
Sbjct:  102 KHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIPN 397          
BLAST of mRNA_H-paniculata_contig14361.2623.1 vs. uniprot
Match: A0A6H5JC59_9PHAE (gag_pre-integrs domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC59_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 1.100e-98
Identity = 181/299 (60.54%), Postives = 220/299 (73.58%), Query Frame = 1
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELINTPMEPGQNPDD*FNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIIYRDPDFNVDQMQTTTRHMFLDEQSRKGS*GGIAGRGFAMVTTRSGTC-FECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPATA--KE-SSSKKSAIDFSADGDESDEGFMYATTHN---GKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ T R++FLDEQ RK + G IAGRGFAM T  SG   FEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTHXXXXS+ S   + K   T   KE   ++K+ IDFS D D    GFMY  T +   G+       G + LVD+GA+ETM D+RLIP 
Sbjct:  102 KHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPIYFECNEQGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHXXXXSTQSRDTHSKPTTTETPKEIEKTEKAEIDFSYDEDAFKGGFMYHATCSKAGGRTFTTTATGTSALVDSGASETMFDNRLIPN 397          
BLAST of mRNA_H-paniculata_contig14361.2623.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 1.710e-98
Identity = 178/299 (59.53%), Postives = 216/299 (72.24%), Query Frame = 1
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELINTPMEPGQNPDD*FNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIIYRDPDFNVDQMQTTTRHMFLDEQSRKGS*GGIAGRGFAMVTTRSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS--YKKGPATA---KESSSKKSA-IDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ T R++FLDEQ RK + G IAGRGFAM T  SG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   +  P T    KE+   + A IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:  102 KHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 397          
BLAST of mRNA_H-paniculata_contig14361.2623.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 3.490e-97
Identity = 175/299 (58.53%), Postives = 216/299 (72.24%), Query Frame = 1
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELINTPMEPGQNPDD*FNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIIYRDPDFNVDQMQTTTRHMFLDEQSRKGS*GGIAGRGFAMVTTRSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPATA--KESS-SKKSAIDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  + GDGQAAF EL  NYN++TDE IRA +++L  T MEPG+NPDD FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ T R++FLDEQ RK + G IAGRGFAM T  SG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   + K   T   KE+  ++K+ IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:  121 KHEDDTGLCGDGQAAFAELKANYNRLTDEAIRAELDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIHAKPTTTEIPKETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 416          
BLAST of mRNA_H-paniculata_contig14361.2623.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 3.550e-97
Identity = 171/310 (55.16%), Postives = 213/310 (68.71%), Query Frame = 1
Query:  163 QKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELINTPMEPGQNPDD*FNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIIYRDPDFNVDQMQTTTRHM-FLDEQSRKGS*GGIAGRGFAMVTTRSGT-CFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPATAKESSSKKSAIDFSADGDESDEGFMYATTHNGKE--VKVNTAGATLLVDTGATETMLDDRLIPGLKEIMQEYKQLVKPKAI 1080
            QKHEDD  ISGDGQAAF EL  NY++VTDEVIRA MEEL N PM PG+NPDD FNQKHL+R ++ KMGE ISDR  KDI V GF+DEY+DVK++++RDP FN   MQ+T R+  + +EQSRKG  G IAGRGFAM TT S   C  C E GHIRRNCP+ + + + ++TKPAGA KWC  H TT HSDEECY+QG KRPE + D+ KAF+AC+     SSA  K       +S+++ +  DF+ D D  D GFM+ T     E     ++ G+ LLVDTGA+ETM D+RLIP     + +Y Q   PK +
Sbjct:   61 QKHEDDTGISGDGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLIRAQLDKMGEPISDRRCKDIWVQGFSDEYRDVKLMVFRDPTFNALGMQSTIRNTSWTNEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAK-KKTKPAGATKWCCKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSDCTHCSSAPNKN------DSNNEVAVADFTRDEDAFDSGFMFGTCSRISERNFAASSTGSILLVDTGASETMFDNRLIPDGN--LHDYTQRNSPKIV 361          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14361.2623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW66_9PHAE1.300e-13464.20CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6Q1_ECTSI2.070e-11971.92CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJB9_9PHAE2.360e-10259.20Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5L580_9PHAE3.540e-10257.28CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KN28_9PHAE9.870e-10259.20Uncharacterized protein (Fragment) n=3 Tax=Ectocar... [more]
A0A6H5K3T5_9PHAE2.980e-9959.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC59_9PHAE1.100e-9860.54gag_pre-integrs domain-containing protein (Fragmen... [more]
A0A6H5L1Z9_9PHAE1.710e-9859.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUN9_9PHAE3.490e-9758.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXR7_9PHAE3.550e-9755.16CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14361contigH-paniculata_contig14361:504..2425 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Model size1085
Cds size174
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14361.2623.1prot_H-paniculata_contig14361.2623.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14361 1701..1874 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929142.4637668-UTR-H-paniculata_contig14361:503..6681622929142.4637668-UTR-H-paniculata_contig14361:503..668Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14361 504..668 +
1691480747.7292352-UTR-H-paniculata_contig14361:503..6681691480747.7292352-UTR-H-paniculata_contig14361:503..668Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14361 504..668 +
1622929142.4750965-UTR-H-paniculata_contig14361:1505..17001622929142.4750965-UTR-H-paniculata_contig14361:1505..1700Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14361 1506..1700 +
1691480747.7419837-UTR-H-paniculata_contig14361:1505..17001691480747.7419837-UTR-H-paniculata_contig14361:1505..1700Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14361 1506..1700 +
1622929142.49501-UTR-H-paniculata_contig14361:1874..24251622929142.49501-UTR-H-paniculata_contig14361:1874..2425Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14361 1875..2425 +
1691480747.7603815-UTR-H-paniculata_contig14361:1874..24251691480747.7603815-UTR-H-paniculata_contig14361:1874..2425Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14361 1875..2425 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929142.4851706-CDS-H-paniculata_contig14361:1700..18741622929142.4851706-CDS-H-paniculata_contig14361:1700..1874Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14361 1701..1874 +
1691480747.7512405-CDS-H-paniculata_contig14361:1700..18741691480747.7512405-CDS-H-paniculata_contig14361:1700..1874Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14361 1701..1874 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14361.2623.1

>prot_H-paniculata_contig14361.2623.1 ID=prot_H-paniculata_contig14361.2623.1|Name=mRNA_H-paniculata_contig14361.2623.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
MGETISDRYFKDICVTGFTDEYKDVKMIIYRDPDFNVDQMQTTTRHMFLD
EQSRKGS*
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mRNA from alignment at H-paniculata_contig14361:504..2425+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14361.2623.1 ID=mRNA_H-paniculata_contig14361.2623.1|Name=mRNA_H-paniculata_contig14361.2623.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1922bp|location=Sequence derived from alignment at H-paniculata_contig14361:504..2425+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGGACAAGACGAAGAGTTTAGCAACCGGGCCTTCCAGGTACACCAGACT TTTGTACTTCCGACAGCAGCGAAGGTTCAGGACGGACGGTTCAAGTTTCG GTTCGGAGATCAACAAGAAGATACGGGGTCGAGTCAGGACAGACGAGCTC GACTCAGGAAGACAAGTATGAGGAATACGGTCTCACGCACACACACAGGA CCTTCACAACACACACCTAATCTGGTAGTGGGAGGAGCTCCTTTAGTGCT GTAGTCACCAACACTTCCCTTGGAGAAAAAGGCTCGCAAATCGAGCAAAG GACTGCTGTATCGACAGCAGGGAGGACTGCTGTATCGACAGCAGGGACGG TCTACACCGCAGTCCTATACACCCATCCGCGAGGAGAGGGTAACAGGAGC GGGGCCGGGAAAAAGACGACCTACAACCGTAGTCCTATACACCGATCCGA GAGGAGAGGGTAGCAGGAACGGGGTCGGGACGGTCCACACTGTAGTCCTA TACACCCATCCGCGAGGAGAGGGTAACAGGAGCGGGGCCGGGAAAATACG ACCTCAACCGTAGTCCTTTACACAGGAACGGGGTCGGGAAGCCTCGGGCT CACACCACGAGCAAGCAACTCCTACGACAGGAGGGATCGTTGCGACAGCA GGAAACACCAGCATCAGCCTGTACACCACAAGGCAACAGGAGCGCATCGC GATAGGAAAGGCACATCAAGATGGGTGATAATCCCCCTGTCGACAACACC ACTAACCTCGCCAACACGATTCGAGGACTGAAGAAGTTCGATGGAAGGAA CCCAGCCGAATTCAAAGGTTGGATGAAGAAACTCTGCGTCATCCTGGGAG TTACACGCAGGGACATTCTCCCGCTGCTTAAAGACAAACGCAGACCTGCC CAAACGGATACTGCTGCCTACGCCGCCTACTGCAAGTCGAACGAGGACTT GTACGCCATACTCTACTTGCTAGTGGAACTACCGGCGCCCCTTTCGGTGC AGAAGCACGAGGATGACAACGAGATCAGCGGAGACGGACAGGCGGCCTTC AGGGAACTGAACCTGAACTACAACAAGGTTACGGACGAAGTGATTCGAGC CACCATGGAGGAGCTGATCAACACGCCCATGGAGCCAGGACAGAACCCGG ACGACTAATTCAATCAGAAGCACCTCCTTCGACACAAGGTCCAGAAGATG GGGGAGACCATCTCGGACCGCTACTTCAAGGATATATGCGTCACAGGATT CACCGACGAGTACAAGGACGTGAAGATGATCATATACCGCGACCCAGACT TTAACGTCGACCAGATGCAGACCACCACGCGGCACATGTTTCTGGACGAA CAATCTCGCAAAGGATCCTAAGGTGGCATTGCCGGCCGCGGCTTCGCCAT GGTCACAACCAGATCGGGGACCTGTTTCGAATGCGGCGAGAATGGACACA TCCGCAGGAACTGCCCCCGAAAGAGAGGCAAGGGAAGAATGCAGAGGACC AAGCCGGCGGGAGCCGCCAAGTGGTGCTCCGTTCACTTCACGACCAAACA CTCCGACGAAGAATGCTACGAGCAAGGAGCGAAGCGGCCGGAAAAATCGA ACGACACGGGCAAGGCTTTCTCGGCATGTACGCACTGCACGCACTGCTCT TCAGCTAGCTACAAGAAGGGGCCAGCCACTGCGAAGGAGTCGAGCAGCAA GAAATCCGCAATCGACTTTAGTGCGGACGGCGACGAGTCCGATGAAGGAT TCATGTACGCCACCACTCATAACGGCAAGGAAGTCAAAGTCAACACTGCA GGAGCCACCCTACTTGTAGACACCGGCGCAACAGAGACCATGCTCGACGA CCGCCTCATCCCAGGCCTGAAGGAGATCATGCAAGAGTACAAGCAACTCG TGAAGCCGAAGGCCATCACGGT
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Coding sequence (CDS) from alignment at H-paniculata_contig14361:504..2425+

>mRNA_H-paniculata_contig14361.2623.1 ID=mRNA_H-paniculata_contig14361.2623.1|Name=mRNA_H-paniculata_contig14361.2623.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=348bp|location=Sequence derived from alignment at H-paniculata_contig14361:504..2425+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGGAGACCATCTCGGACCGCTACTTCAAGGATATATGCGTCACAGG
ATTCACCGACGAGTACAAGGACGTGAAGATGATCATATACCGCGACCCAG
ACTTTAACGTCGACCAGATGCAGACCACCACGCGGCACATGTTTCTGGAC
GAACAATCTCGCAAAGGATCCTAAATGGGGGAGACCATCTCGGACCGCTA
CTTCAAGGATATATGCGTCACAGGATTCACCGACGAGTACAAGGACGTGA
AGATGATCATATACCGCGACCCAGACTTTAACGTCGACCAGATGCAGACC
ACCACGCGGCACATGTTTCTGGACGAACAATCTCGCAAAGGATCCTAA
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