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Homology
BLAST of mRNA_H-paniculata_contig1432.2609.1 vs. uniprot
Match: A0A836CJP0_9STRA (Peptidase family M50-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP0_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 8.790e-16 Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 1
Query: 160 VVVRTGRLDEAQQLSAVINDAFQASAYFKKEGCADRVTPDGKQVEDIMKQPCCA--FLVAEESCSTHDIRDTTKSGS-RIVGCVEIDWS--GRANCGGKRPGVDAIFGMLSVKSEHLRRGIGQLLVASAERRCRQELAR------EYCMEISVE--RSD-LLKWYQDQGYVMGGQVSFPVPEIIRDEFDVKLQLLTK 708
V +R +A+ LSAV+NDAF A A+FKK R+ +G + +M++ + F+VAE ST I + SG ++GC+ + W G + PG M+SV +H ++GIG L+++AE C L + MEI + R D L+ WY QGY + FP P+I+ D V+L +L K
Sbjct: 26 VAIREATAADAKTLSAVVNDAFMADAFFKKPDKIYRLDWEGALAKQMMERDPSSGNFIVAERVSSTTLIAGSGSSGEPTMMGCLFVHWHLHGSNSFPEVCPGPTGSVSMVSVPDKHGKQGIGTALISAAESLCAARLRAMGASGDTFTMEIPIVSGRVDPLIPWYSKQGYQEQERQVFPSPDIVADGHHVELVMLRK 222
BLAST of mRNA_H-paniculata_contig1432.2609.1 vs. uniprot
Match: A0A2V7U6X9_9BACT (GNAT family N-acetyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7U6X9_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 1.300e-6 Identity = 54/185 (29.19%), Postives = 85/185 (45.95%), Query Frame = 1
Query: 160 VVVRTGRLDEAQQLSAVINDAFQASAYFKKEGCADRVTPDGKQVEDIMKQPCCAFLVAEESCSTHDIRDTTKSGSRIVGCVEIDWSGRANCGGKRPGVDAIFGMLSVKSEHLRRGIGQLLVASAERRCRQELAREYCMEISVERSDLLKWYQDQGYVMGGQVSFPVPEIIRDEFDVKLQLLTKIL 714
V VR + +A+ ++A++N AF +F DR + ++ +++ FL+AE + R+V CV ++ R G FGMLSV G+G+LLVA+AE RCR+E R + + R +L Y+ GYV G FP E R + + ++TK L
Sbjct: 4 VHVRDATVSDAEAIAALVNRAFLVERFFVD---GDRTSL--AEISHLLETG--TFLLAE-------------TDGRLVACVYVE----------RRGERGYFGMLSVDPSRQGEGLGRLLVAAAEDRCRREGCRMMEIHVVDLRRELPPIYRRLGYVEVGTEPFPDKE--RPKQPARFIVMTKPL 156
BLAST of mRNA_H-paniculata_contig1432.2609.1 vs. uniprot
Match: UPI000A0765FD (GNAT family N-acetyltransferase n=1 Tax=Frankia sp. Cc1.17 TaxID=573497 RepID=UPI000A0765FD) HSP 1 Score: 53.9 bits (128), Expect = 6.270e-5 Identity = 43/161 (26.71%), Postives = 74/161 (45.96%), Query Frame = 1
Query: 160 VVVRTGRLDEAQQLSAVINDAFQA----SAYFKKEGCADRVTPDGKQVEDIMKQPCCAFLVAEESCSTHDIRDTTKSGSRIVGCVEIDWSGRANCGGKRPGVDAIFGMLSVKSEHLRRGIGQLLVASAER-RCRQELAREYCMEISVERSDLLKWYQDQGY 627
+ VR + +A + +I A++ + + + D D V + + +P FL+A D G +VGC ++ +R G A FGM +V+ E RG+G L+A+AER CR+ +R M + R++L+ WY+ +GY
Sbjct: 21 LTVRAAGVGDAATVVDLIESAYRGERSRAGWTTEADLLDGQRTDLAMVTEELGRPDFRFLLAA---------DPGDPGGTVVGCCQLQ---------RRDGGIAYFGMFAVRPELQGRGVGDALLAAAERFACREWSSRRMEMFVISLRAELIAWYERRGY 163
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Bacteria |
Seed ortholog score | 60.5 |
Seed ortholog evalue | 1.3e-06 |
Seed eggNOG ortholog | 1380346.JNIH01000060_gene964 |
Hectar predicted targeting category | signal peptide |
EggNOG free text desc. | Acetyltransferase (GNAT) domain |
EggNOG OGs | 2GJJZ@201174,COG0454@1,COG0456@2 |
Ec32 ortholog description | Hypothetical protein |
Ec32 ortholog | Ec-06_006880.1 |
COG Functional cat. | K |
Best tax level | Actinobacteria |
Best eggNOG OG | NA|NA|NA |
Exons | 3 |
Model size | 821 |
Cds size | 717 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1432.2609.1 >prot_H-paniculata_contig1432.2609.1 ID=prot_H-paniculata_contig1432.2609.1|Name=mRNA_H-paniculata_contig1432.2609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp
MRLLGAELCFVAALGGIKLSMMDAVALSLSSTSVSSTARNTNGSNHHRDL SNVVVRTGRLDEAQQLSAVINDAFQASAYFKKEGCADRVTPDGKQVEDIM KQPCCAFLVAEESCSTHDIRDTTKSGSRIVGCVEIDWSGRANCGGKRPGV DAIFGMLSVKSEHLRRGIGQLLVASAERRCRQELAREYCMEISVERSDLL KWYQDQGYVMGGQVSFPVPEIIRDEFDVKLQLLTKILP* back to topmRNA from alignment at H-paniculata_contig1432:3918..9304- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1432.2609.1 ID=mRNA_H-paniculata_contig1432.2609.1|Name=mRNA_H-paniculata_contig1432.2609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5387bp|location=Sequence derived from alignment at H-paniculata_contig1432:3918..9304- (Halopteris paniculata Hal_grac_a_UBK monoicous) CACATGCGATTATTAGGAGCTGAGTTGTGCTTTGTGGCTGCGCTGGGTGG
TATCAAGCTGAGCATGATGGATGCTGTTGCGTTGTCGTTGTCATCGACAT
CAGTATCAAGTACTGCTCGCAACACCAACGGCAGCAATCATCATCGCGAC
CTCTCGAATGTGGTGGTAAGGACTGGAAGGCTGGACGAAGCCCAACAGCT
GAGCGCGGTTATCAACGATGCCTTCCAAGCTAGCGCGTATTTCAAGAAGG
AGGGTTGTGCGGATAGGGTGACACCCGACGGAAAGCAAGGTGGGTAGTGA
TTTATGTTATTCAAACGTTGCACTATAATATATTTATGGCGTGTCTTGGT
CTTCCCCAAACTCACGACGATGTACTCGGTTTACTGCAGGAACAAACCTT
GACAAACGTGCACTGTACTAAGAGGAGATTTTCTGTCAAAGGTGAAGGTC
CACCTTCACTGCCTCATTATGGTCGCTTGATCAACGGTCACTAAGTGCTT
TTCGTTTTTATCTCGATGCTTACTGTAGACTGGAACGTATAGCGGGGGTC
GGTACATGAAAAGAACTGCACCGGATTAACAAAATTGCGTGAGGAAAATT
GAATTGGTGGCGAAGGGTGCCGGTGTATCGGTACCCGTAGAATAAGCGCC
AGGCTATTTGATCCACCGTCTCCGGCTTCGCCCACCACCCGTCCACAAAT
CCTCACACCAAACCAAACCCAACCCAACACTAACATGAACACTACGTTGC
ATATTTCCAGCCTTGCTCTGGCGACCCTGCCGTAGGGTTTAGCATAGTGC
ATGTCCCATACAAATTGATCCAAGCAGGTTTCTGAACCACGACCCGCAAC
AAGAATCAATTTCCAGATCGGCCGCACCGATGTGATCCCTCCCCTGGGCA
AGATAACTCGGGGCATGGCATGTTCGGCTGAACAAATCCTGGCGCCATCC
CCGCATTTGCACTGTCTTGAGATGAAGGATATAATATTTAAAGAATTCAA
AATAACGCGGAATGTTCACGCTATTGCACGGTACATTTTTTGGAACTTGC
GAAATAGGGTACGAAACGAGCACTACTGAGAAATATTTGTTCCAGAAATA
GCACGATAAACATATGCTCTGCGGGGAATAATATCTCGACCGTGGTTTTT
CGATGTCCAAGTGCCGATCATGTTATACTGAAAGTGCCGTGTGCGGTACT
TGACCACGGTAAACCGATTTCTGAATACCGTGAAAAATTACCGTGACCAT
AGCAGGGTATTTATTCACTCAGGCCACCTCGTATGGAACTTGGATAATTG
AACAAAAAGAAGGATATTTTGAATTTTCCAAATGAAAAAATTCCTATTCA
AAAATCGAAGAACCCCTTCTTATGGAAAATTGTGATTTTTCAATGTGTTC
CAAACTTGGACAGGCTGTAGCTACTGCAAGGAGAATAGAGTAAAGTCATA
TCCTTAGTTTTGAAAAGCGCGCGGAAAACGCCAGGTGTAGTTATAGCAAA
CGAGATAGAGGTCAGCGGTAGGCACGACGTCAATATCTCCAGAGGGTGTC
GTAACAGGGGATGATGAGCCCCAGTTTGAAATTGAACTGCCGATCGAACC
GGACCCTATGGTGAAGTGGGCTGTGCAGCGCTACATGCATTACCTGGACC
GGGTTTGTGGTTACTCGACATACAGCAAGCAACATCTCATACTTGTCGTC
GGACCAATTGAATACATCCTCATCCTCAGTAACTGGCACCATCACGGTAG
GGTGTGTGTGTACTGCGAAAAGGGTTAGCTTGTGTGTGAGGTTTGGCGAG
GGTGGCCTGTTGTATCTCATTATCTGTACTCTTGGAAAATCAGATAGATA
CTGCCGCGTTTTCTGACGATGCCGGTGGTGCTTTGAATCATGCCTTGACG
TTGCCGCTCCTGCATTTCGTCATGTTCTTCAGATAAAAAGGATCCAAGTT
CCGATAGTCCCACTTTGGTAATTATAATCTTTTCCCCCCCCAGATGGAGC
AAAATTTCGTCGACTTCGATATTTGAAAAAATATATCCACGTTTTTCCCC
TCATAAGAAGTGGTCAAAGGGATTTTTCACTTGAATAATTAAAAATATCC
ACTTATTCAAAATTTTCCATGTCCCATAAGAAGTGGCCTTAGATATCGGA
AAAAAGTACCGATGATATGTTTTCCTTAATGGTGCCCTTTTGTGAGCAGT
TTCACAAATCCCGAAAAGTACCGCCTAATACCGAGAATACCCCTGAAAAG
AACACCATTCGGGTAACGTCTGATAAACAGGACTGTTATCATAATTGCCA
GTTAACCTTCAAGTATTCTCTATCCAGATCCGATTTAATTTTTTTGAAAA
AGATTAAGAAGAATAAAAAGTAGTTGTTGTGGAGCCTCACCTGTTCATTT
TTTTACCTGTGTGACGTACCGTTTTTGAGTCCTTCGTGAATACGATCACA
TAACGTGCTATATATATATACATTAGTATACGCCACTTCTGTGGCGAGGC
AACTATATTTGGGCATAAAGAGAGTGTACGGCTCTAGGAGCGGTCTATCT
AAGAGAAATCAGGTTAATCGCTTTGGGTCTGGGAATAATTTCGAAGCGCT
ATCTTATCTACACGAAAAAACCCTCCGGATAATAACGAAACGAAGGCTCA
ACTGAGCAGGAAATCGTGCAACTATCTCCGAGATAAGCTGCAGCTGTTGC
TGACCACCGCAACGAACGTCGAATTTCATATTCAATGAAAATGGCATATC
AATATGCGGCGCGTTTGAAAGAGCCGCGAAATGCCATGCGTATCTCGAGA
ACGCGTAACCTATTTTGCACTGTGAACAGAGATAGCAAGCATCAAAATTG
ATGCCACTGGCACAGATTTTCCCTCATGTATAGCCCTATAGTCATATCGG
GCAGCTTTTCCATTTTCTTCATACTGGATCGATATTTTTCCCAGTCCCGT
TGGTCACCCGGCAAAAAAAACGTCTTTTTTCGCAGATTTGAGACCGAAGT
CTCACAGGAGTTAAATTACCGTGTCAACAATTTTTCAGGATCAAGAGATT
ATAGGCTGCGCAAGCTAAACCTCTCTTAAATCAAGTTGGGGCGTGGAAAA
TGACCGGTGCTGTACTTCATCCACTTGACACTACCTGGGTTTCAATCGAG
CCAACTTGAGTAGACTATCACGAAGTGTTCTCATTTGAACATTTCATCTG
CCGAGATGCACATAGGCTTCTTCCAGCTGGATATACGACAGTGACCATGA
GTGCGTTTGTCCGACAGTCTTCACAATATCTCAGATATGGTTTTGACGGA
TTAAATTTTTTTTTTCTTTTGAATGAAATAATGAAGATTTTTCGGCTTGT
CCTCACCCTCTCTTGAACCCGCACACCGACTGCATAACAATTCACAGTTC
TCACGATTGCGACTCGTATTCGTATGCCCATGACACAATAGATGTCCAGA
GACCATCCAGCCAACCCCTGGTTGCTCTTGTGATATGTTTTTTCATAGGC
TGCTATGGATAAGATGATCCAAATATTTTGACCAGTGTAGGGACCTTTTT
GGTTAATCTGAATCCATACCACGGCTGAAATCTGGTGGTCGTACTCCAAC
ACGGCGAGCCCGCCCATCCCCCTCCTGTTTGATTAATATAAGCACAGGTA
ATCCAACAGCTTACAGATGCTCGAAGATGCTGGCATTCGTGGGGGGGGTT
TGAGTATTAGTCGTTATTGAATTTCAATAGTCGACTCATATGTGCTCGTT
CCACTTTCTGGAATATAACAACGGGCATTTTTTGCAACATTTCACTCTCG
ATCAACTCTGATTACCTCCCCCTCTCCGTGAATTTCTGAGGTTATGCTTG
CCCTAACCAGACACCGTGCGAGTTGCCACATTTGGGCTCCCCCAAAAAAT
AGGGGTTTGAATGTTAACCGTGGGTTGAGAGCCATTGTCCGGGAATCATA
ATTCGACCGAGTTTTTAGGAATCCATCCAATCTATTGGGTTCAAATTTAG
TTCGTGATCATTATCGAGCTCGACAATCAAACAGGAGGGACAATTAAGAA
GGAAGACATACGAAGATAAAGGAAAGTGCTGGAACACATGTATTTCTGGA
CGTGAAGCAGCTGAGCTGGGTACGTGTAGTGGCCACCACCATTCGTGCAA
CTTTGTTGGTCGAGGCTGTTGAGGAGATCGTGCCAACAAGATGACCTCGG
TTGATCGGTGCGTTCAGCTCAAACATCTGCTCGTGCAATCGTTAACCCCT
CGTATGTACGCTTTTGCTGTCGGTCATGTTGCTTCGCTGTCCTCCTCGCG
GCAGTTGAGGATATAATGAAGCAGCCTTGCTGCGCCTTCTTGGTAGCAGA
GGAATCATGCTCAACACATGACATTAGGGATACTACCAAAAGCGGGAGCA
GGATTGTGGGCTGCGTGGAGATTGATTGGTCGGGAAGGGCCAACTGTGGG
GGCAAGCGCCCAGGGGTAGACGCCATTTTTGGGATGCTGAGCGTGAAGTC
GGAGCACTTGCGACGGGGAATCGGACAGTTACTCGTAGCCTCGGCAGGTG
AGAAAAAAGAAAGTGAACACCGACACGCAGCACACCGAAGACGTTCGAAA
CGCTACTATTTATCGATCACAAACCCAATCTAACATTCAATATAAATATA
GATTCACAGCACACGGAAGGTTTTTAATGCTCAAGTGATGAATGTAAACT
TGTAACCCAAAAACACGAGTACGGGTTTAGTTGTGACCAATGCGACTCGC
TGCCCCCCCCCCCCCCGCCCACTAGCCCACTAGCCCCCACCCTCTCGAGG
AAAAATGATGGTTTTTAACAGTTACTGTTCTCGAAACATGAAGTACTCAA
AATAAGATGTGATTCTATTTAACTGATGGCCATTTTGGTGGGTGAGCTAT
GTTGGCATCCATGAGGTTCGGTTGTGATCTTGACAATGTAGTGCGTTTCG
CGTGTTGTGGACGCTTTTTACAACAGTGGTATGGATAAAGATATTGTACG
ATATGAACTAGCTGTGTTTTCTTATTGTAGTTATCTCGAATTCTACATCG
CTCTCGCTTCGCTCTTTGCTTTGTATCGCATGTTCATTTGTTCGGCAGAG
CGAAGATGTCGCCAGGAGCTGGCAAGGGAGTACTGTATGGAAATTTCCGT
AGAGAGATCGGATTTGCTCAAATGGTACCAGGACCAAGGTTACGTTATGG
GAGGACAGGTTTCCTTTCCTGTGCCTGAAATTATCAGGGATGAATTTGAT
GTGAAGCTTCAACTGTTGACGAAAATTTTGCCCTGACGTTGTGCTCGATT
GTTACAAGTAGAAAACATTTTTTTTTTTTTTTCGTTCGTCACCATTGAAT
TGCGATGCCATTGAATTTCAATTCCATTTGTTTTTAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1432:3918..9304- >mRNA_H-paniculata_contig1432.2609.1 ID=mRNA_H-paniculata_contig1432.2609.1|Name=mRNA_H-paniculata_contig1432.2609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1434bp|location=Sequence derived from alignment at H-paniculata_contig1432:3918..9304- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGCGATTATTAGGAGCTGAGTTGTGCTTTGTGGCTGCGCTGGGTGGTAT CAAGCTGAGCATGATGGATGCTGTTGCGTTGTCGTTGTCATCGACATCAG TATCAAGTACTGCTCGCAACACCAACGGCAGCAATCATCATCGCGACCTC TCGAATGTGGTGGTAAGGACTGGAAGGCTGGACGAAGCCCAACAGCTGAG CGCGGTTATCAACGATGCCTTCCAAGCTAGCGCGTATTTCAAGAAGGAGG GTTGTGCGGATAGGGTGACACCCGACGGAAAGCAAGATGCGATTATTAGG AGCTGAGTTGTGCTTTGTGGCTGCGCTGGGTGGTATCAAGCTGAGCATGA TGGATGCTGTTGCGTTGTCGTTGTCATCGACATCAGTATCAAGTACTGCT CGCAACACCAACGGCAGCAATCATCATCGCGACCTCTCGAATGTGGTGGT AAGGACTGGAAGGCTGGACGAAGCCCAACAGCTGAGCGCGGTTATCAACG ATGCCTTCCAAGCTAGCGCGTATTTCAAGAAGGAGGGTTGTGCGGATAGG GTGACACCCGACGGAAAGCAAGTTGAGGATATAATGAAGCAGCCTTGCTG CGCCTTCTTGGTAGCAGAGGAATCATGCTCAACACATGACATTAGGGATA CTACCAAAAGCGGGAGCAGGATTGTGGGCTGCGTGGAGATTGATTGGTCG GGAAGGGCCAACTGTGGGGGCAAGCGCCCAGGGGTAGACGCCATTTTTGG GATGCTGAGCGTGAAGTCGGAGCACTTGCGACGGGGAATCGGACAGTTAC TCGTAGCCTCGGCAGTTGAGGATATAATGAAGCAGCCTTGCTGCGCCTTC TTGGTAGCAGAGGAATCATGCTCAACACATGACATTAGGGATACTACCAA AAGCGGGAGCAGGATTGTGGGCTGCGTGGAGATTGATTGGTCGGGAAGGG CCAACTGTGGGGGCAAGCGCCCAGGGGTAGACGCCATTTTTGGGATGCTG AGCGTGAAGTCGGAGCACTTGCGACGGGGAATCGGACAGTTACTCGTAGC CTCGGCAGAGCGAAGATGTCGCCAGGAGCTGGCAAGGGAGTACTGTATGG AAATTTCCGTAGAGAGATCGGATTTGCTCAAATGGTACCAGGACCAAGGT TACGTTATGGGAGGACAGGTTTCCTTTCCTGTGCCTGAAATTATCAGGGA TGAATTTGATGTGAAGCTTCAACTGTTGACGAAAATTTTGCCCTGAAGCG AAGATGTCGCCAGGAGCTGGCAAGGGAGTACTGTATGGAAATTTCCGTAG AGAGATCGGATTTGCTCAAATGGTACCAGGACCAAGGTTACGTTATGGGA GGACAGGTTTCCTTTCCTGTGCCTGAAATTATCAGGGATGAATTTGATGT GAAGCTTCAACTGTTGACGAAAATTTTGCCCTGA back to top
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