mRNA_H-paniculata_contig14315.2608.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14315.2608.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 225 bits (573), Expect = 6.230e-63 Identity = 166/508 (32.68%), Postives = 245/508 (48.23%), Query Frame = 1 Query: 13 MKKELHSLDEHQVADFIPASSIPPNHTVIGTRWVFKVKADGKFKARLVIQGWSQKHGIDCGSTFAPVCRLESQIMLLALATAKDWTVHALDVQVAFLNGKLKESVFYSTTRQI---------YVMSLKRSIYGLRQSP---IGTI-PSTIS*GVWAL----------HRPSRI--------LVCTVNEATTTTS*LQNQWTNY*WMFATNS*TSSLSRTLERYRL-------FLAWRYCATNKLAPFSCHSTSSY------RFNMSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKLELVGYSDASYCT-----MSTTGTMFFSANELVHFAS*LQNISATSTTKAELIALAACTKQGIHLLGICRELELQLNSCQ--VRSDNRGALHIPANSNQSSRSIHLAIRFAAFRDWVRSKQLIIDHVSSSDQLADILIKRCERVTFARL 1383 +K+E+ SL +V +P S++PP I ++WVFK KADG FK R+V QGW+Q G+DCGST+APVCR++S M+ + + +DV AFL ++E VF VM L +S+YGL QSP TI P + G AL H ++I L+ N++ L + W + +R+++ F ++ A S +Y RF MS + PT TPG + S D+LLD T +YQ +VGSL+++ Q R+DI ++ Q AR M+ P++ H+ A K TLRYL G D SITY + +L +SD+++ ST+ + AN + F S LQ ++A ST +AEL+A A K+ + + EL Q V DN LH N + SSR+ H+A+RF R+ V ++ I +V + D LADI K + F L Sbjct: 149 LKREMKSLSNRKVYKLVPRSAVPPGRKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGW-------KLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHL 649
BLAST of mRNA_H-paniculata_contig14315.2608.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE) HSP 1 Score: 220 bits (561), Expect = 4.480e-60 Identity = 156/492 (31.71%), Postives = 241/492 (48.98%), Query Frame = 1 Query: 1 WMEAMKKELHSLDEHQVADFIPASSIPPNHTVIGTRWVFKVKADGKFKARLVIQGWSQKHGIDCGSTFAPVCRLESQIMLLALATAKDWTVHALDVQVAFLNGKLKESVFY----------STTRQIYVMSLKRSIYGLRQSPI---GTIPSTIS*GVWALHRPSR----------ILVCTVNEATTTTS*LQNQWTNY*WMFATNS*TSSLSRTLERYRLFLAWRYCATNKLAPFSCH--STSSYRFNMSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKLELVGYSDASYCT-----MSTTGTMFFSANELVHFAS*LQNISATSTTKAELIALAACTKQGIHLLGICRELELQ-LNSCQVRSDNRGALHIPANSNQSSRSIHLAIRFAAFRDWVRSKQLIIDHVSSSDQLADILIKRCERVTFARL 1383 W A KE+ +L +H V + +P SS+P ++GT++VFK K DG+FKARLV+ G Q+ G D G ++APVCR+ S M A+ +W ++ LDV AFLN V+ S T + V L+RS+YGL QSP T+ +++ W + I++ TV + Q + T+ + ++R R LA H +T RF M ANP TPG ST D +L YQ+M GS+++L Q TRFD+ ++ +Q ++ S P Q ++ A K LRYLRG + I Y R + L ++D+S+ STTG +FF A L+ + + Q ++A ST +AE+ AL+ ++ +++ EL + S + SD+ GAL + N+ S R+ H+ +R+ R+ V Q+ + H S QLADI K + FA + Sbjct: 357 WKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASI 848
BLAST of mRNA_H-paniculata_contig14315.2608.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 222 bits (566), Expect = 7.700e-60 Identity = 162/496 (32.66%), Postives = 245/496 (49.40%), Query Frame = 1 Query: 1 WMEAMKKELHSLDEHQVADFIPASSIPPNHTVIGTRWVFKVKADGKFKARLVIQGWSQKHGIDCGSTFAPVCRLESQIMLLALATAKDWTVHALDVQVAFLNGKLKESVFYSTTRQI---------YVMSLKRSIYGLRQSP---IGTI-PSTIS*GVWALHRPSRILVCTVNEATTTTS*LQNQWTNY*WMFATNS*TSSL--SRTLERYRL-------FLAWRYCATNKLAPFSCHSTSSY------RFNMSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKLELVGYSDASYCT-----MSTTGTMFFSANELVHFAS*LQNISATSTTKAELIALAACTKQGIHLLGICRELELQLNSCQ--VRSDNRGALHIPANSNQSSRSIHLAIRFAAFRDWVRSKQLIIDHVSSSDQLADILIKRCERVTFARL 1383 W A ++E+ SL + +V +P S++PP I ++WVFK KADG FK R+V QGW+Q G+DCGST+APVCR++S M+ + + +DV AFL ++E VF VM L +S+YGL QSP TI P + G AL + + N A + + + +S S+ + +R+++ + ++ A S +Y RF +S + PT TPG + S D+LLD T +YQ +VGSL+++ Q R+DI ++ Q AR M+ P++ H+ A K TLRYL G D SITY + +L +SD+++ ST+ + AN + F S LQ ++A ST +AEL+A A + + + EL Q V DN LH N + SSR+ H+A+RF R+ V ++ I +V + D LADI K + F L Sbjct: 1166 WNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKI----YLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHL 1657
BLAST of mRNA_H-paniculata_contig14315.2608.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE) HSP 1 Score: 208 bits (530), Expect = 3.430e-58 Identity = 151/484 (31.20%), Postives = 237/484 (48.97%), Query Frame = 1 Query: 25 LHSLDEHQVADFIPASSIPPNHTVIGTRWVFKVKADGKFKARLVIQGWSQKHGIDCGSTFAPVCRLESQIMLLALATAKDWTVHALDVQVAFLNGKLKESVFY----------STTRQIYVMSLKRSIYGLRQSPI---GTIPSTIS*GVWALHRPSR----------ILVCTVNEATTTTS*LQNQWTNY*WMFATNS*TSSLSRTLERYRLFLAWRYCATNKLAPFSCH--STSSYRFNMSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKLELVGYSDASYCT-----MSTTGTMFFSANELVHFAS*LQNISATSTTKAELIALAACTKQGIHLLGICRELELQ-LNSCQVRSDNRGALHIPANSNQSSRSIHLAIRFAAFRDWVRSKQLIIDHVSSSDQLADILIKRCERVTFARL 1383 + +L +H V + +P SS+P ++GT++VFK K DG+FKARLV+ G Q+ G D G ++APVCR+ S M A+ +W ++ LDV AFLN V+ S T + V L+RS+YGL QSP T+ +++ W + I++ TV + Q + T+ + ++R R LA H +T RF M ANP T G ST D +L YQ+M GS+++L Q T+FD+ ++ +Q ++ S P Q ++ A K LRYLRG + I Y R + L ++D+S+ STTG +FF A L+ + + Q ++A ST +AE+ AL+ ++ +++ EL + S + SD+ GAL + N+ S R+ H+A+R+ R+ V Q+ + H S QLADI K + FA + Sbjct: 1 MDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASI 484
BLAST of mRNA_H-paniculata_contig14315.2608.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE) HSP 1 Score: 211 bits (536), Expect = 1.820e-56 Identity = 148/475 (31.16%), Postives = 225/475 (47.37%), Query Frame = 1 Query: 1 WMEAMKKELHSLDEHQVADFIPASSIPPNHTVIGTRWVFKVKADGKFKARLVIQGWSQKHGIDCGSTFAPVCRLESQIMLLALATAKDWTVHALDVQVAFLNGKLKESVFYS----------TTRQIYVMSLKRSIYGLRQSPIGTIPSTIS*GVWALHRPSRILVCTVNEATTTTS*LQNQWTNY*WMFATNS*TSSLSRTLERYRLFLAWRYCATNKLAPFSCHSTSSYRFNMSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKLELVGYSDASYCT-----MSTTGTMFFSANELVHFAS*LQNISATSTTKAELIALAACTKQGIHLLGICRELELQ-LNSCQVRSDNRGALHIPANSNQSSRSIHLAIRFAAFRDWVRSKQLIIDHVSSSDQLADILIKRCERVTFA 1377 W A+ E+ +L +H+V + S +P + + TR+VFK+KAD +FKARLV G Q+ G G +APV RL S ML A+A W V+ LDV AFLN V+ TT ++ V L++S+YGL QSP +W N+A +R +F W + T+ R+ M ANP TPG ST D LL +QA+ GSL++L Q TR+D+ ++V Q R + P Q H+AA K LRYLRG D+ I Y + + L ++D+S+ STTG +FF L+ + + Q ++A +T +AEL AL+ ++ +++ E+ + S + SD+ GAL + +N+ SSR+ H+A+RF R+ + ++ + H S+ LADI K + FA Sbjct: 471 WKSAIDTEMGNLAKHKVFKKVRISLVPKDEDIFDTRFVFKIKADSRFKARLVAGGHRQRAGRHYGENYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSP----------SLW-------------NDAIN-----------------------------DRLIIF-GWHFEMTDM----------GERYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDMSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFA 882
BLAST of mRNA_H-paniculata_contig14315.2608.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE) HSP 1 Score: 207 bits (526), Expect = 8.840e-56 Identity = 153/493 (31.03%), Postives = 235/493 (47.67%), Query Frame = 1 Query: 1 WMEAMKKELHSLDEHQVADFIPASSIPPNHTVIGTRWVFKVKADGKFKARLVIQGWSQKHGIDCGSTFAPVCRLESQIMLLALATAKDWTVHALDVQVAFLNGKLKESVFYS----------TTRQIYVMSLKRSIYGLRQSPI---GTIPSTIS*GVWALHR--PSRILVCTVNEATTTTS*LQNQWTNY*WMFATNS*TSSLSRTLERYRLFLAWRYCATNKLAPFSCHSTSSY-----------RFNMSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKLELVGYSDASYCT-----MSTTGTMFFSANELVHFAS*LQNISATSTTKAELIALAACTKQGIHLLGICRELELQ-LNSCQVRSDNRGALHIPANSNQSSRSIHLAIRFAAFRDWVRSKQLIIDHVSSSDQLADILIKRCERVTFARL 1383 W A+ E+ +L +H+V + S +P + + TR+VFK+KAD +FKARLV G Q+ G G +APV RL S ML A+A W V+ LDV AFLN V+ TT ++ V L++S+YGL QSP I + W R P + + +E T + + + L + E + R + H T + R+ M ANP TPG ST D LL +QA+ GSL++L Q TR+D+ ++V Q R + P Q H+AA K LRYLRG D+ I Y + K L ++D+S+ STTG +FF L+ + + Q ++A +T +AEL AL+ ++ +++ E+ + S + SD+ GAL + +N+ SSR+ H+A+RF R+ + ++ + H S+ LADI K + FA + Sbjct: 234 WKSAIDTEMGNLAKHKVFKKVRISLVPKDEDIFDTRFVFKIKADSRFKARLVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYE-HGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATI 725
BLAST of mRNA_H-paniculata_contig14315.2608.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 207 bits (526), Expect = 1.500e-55 Identity = 157/479 (32.78%), Postives = 230/479 (48.02%), Query Frame = 1 Query: 1 WMEAMKKELHSLDEHQVADFIPASSIPPNHTVIGTRWVFKVKADGKFKARLVIQGWSQKHGIDCGSTFAPVCRLESQIMLLALATAKDWTVHALDVQVAFLNGKLKESVFYSTTRQI---------YVMSLKRSIYGLRQSP-------------IGTIPSTIS*GVWALHRPSRILVCT--VNEATTTTS*LQNQWTNY*WMFATNS*TSSLSRTLERYRLFLAWRYCATNKLAPFSCHSTSSYRFNMSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKLELVGYSDASYCTMSTTGTMFFSANELVHFA-----S*LQNISATSTTKAELIALAACTKQGIHLLGICRELEL--QLNSCQVRSDNRGALHIPANSNQSSRSIHLAIRFAAFRDWVRSKQLIIDHVSSSDQLADI 1344 W A KE+ SL + +V +P + +P H VIG++WVFKVK + KARLV +GW+Q G DCG TFAPVCRL+S M+ A+A KD V LDV+ AFL ++E+VF VM L++S+ GL QSP IG P V+ + ++V T V++ +Q NY T+S+ L+R F M S P T G S ++LL+A YQA++GS+++L Q TR+DI + Q AR MS P++ H+ A K LRYL G D SITY R +L S+A+ + G S ++ A S LQ+++A ST +AEL+A A K+ I + +EL + +S + D+ L++ N S + H+A+RF R V+ ++ I ++ + D LADI Sbjct: 317 WKAATDKEIKSLQDLKVYKLVPRTDVPLGHNVIGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIYDHNNTVVVLTLYVDDLLIIRGGAHHQPGNY---------TTSI---LDR---------------------------FGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADI 756
BLAST of mRNA_H-paniculata_contig14315.2608.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 209 bits (531), Expect = 1.730e-55 Identity = 163/493 (33.06%), Postives = 241/493 (48.88%), Query Frame = 1 Query: 1 WMEAMKKELHSLDEHQVADFIPASSIPPNHTVIGTRWVFKVKADGKFKARLVIQGWSQKHGIDCGSTFAPVCRLESQIMLLALATAKDWTVHALDVQVAFLNGKLKESVFYSTTRQIYVMSLKRSIYGLRQSP---IGTI-PSTIS*GVWAL----------HRPSRI--------LVCTVNEATTTT---S*LQNQWTNY*WMFATNS*TSSLSRTLERYRLFLAWRYCATNKLAPFSCHSTSSYRFNMSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKLELVGYSDASYCT-----MSTTGTMFFSANELVHFAS*LQNISATSTTKAELIALAACTKQGIHLLGICRELELQLNSCQ--VRSDNRGALHIPANSNQSSRSIHLAIRFAAFRDWVRSKQLIIDHVSSSDQLADILIKRCERVTFARL 1383 W A ++E+ SL + +V +P S +PP I ++WVFK KADG FK R+V QGW+Q G+DCGST+APVCR++S M+ + + +D G + VM L +S+YGL QSP TI P + G AL H ++I L+ N++ + LQ ++ T+ +SL +E R R T ++ + + RF MS + PT TPG + S D+LLD T +YQ +VGSL+++ Q R+DI ++ Q AR M+ P++ H+ A K TLRYL G D SITY + +L +SD+++ ST+ + AN + F S LQ ++A ST +AEL+A A K+ + + EL Q V DN LH N + SSR+ H+A+RF R+ V ++ I +V + D LADI K F L Sbjct: 524 WNAAAEREMKSLSDRKVYKLVPRSGVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMDD-----GGDM-------------VMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFK------MTDLGEASLVLRMEIRRD----REANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHL 988
BLAST of mRNA_H-paniculata_contig14315.2608.1 vs. uniprot
Match: UPI0018763992 (DDE-type integrase/transposase/recombinase n=2 Tax=Streptomyces plicatus TaxID=1922 RepID=UPI0018763992) HSP 1 Score: 206 bits (524), Expect = 2.680e-54 Identity = 165/499 (33.07%), Postives = 249/499 (49.90%), Query Frame = 1 Query: 1 WMEAMKKELHSLDEHQVADFIPASSIPPNHTVIGTRWVF--KVKADGKF---KARLVIQGWSQKHGIDCGSTFAPVCRLESQIMLLALATAKDWTVHALDVQVAFLNGKLKESV-------FYSTTRQIYVMSLKRSIYGLRQSP-------------IGTIPSTIS*GVWALHRPSRILVCTVNEATTTTS*LQNQWTNY*WMFATNS*TSSLSRTLERYRLFLAWRYCATNKLAPFSCHSTSSY------RFNMSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSK-LELVGYSDASYC-----TMSTTGTMFFSANELVHFAS*LQNISATSTTKAELIALAACTKQGIHLLGICRELELQL-NSCQVRSDNRGALHIPANSNQSSRSIHLAIRFAAFRDWVRSKQLIIDHVSSSDQLADILIKRCERVTFARL 1383 W++AM +EL ++++ + +P P + VIGT+WVF K+ DG+ KARLV +G++Q GID TFAPV RLE+ M LALA K++ V +DV+ AFLNG L+E V F+S V L++++YGL+Q+P IG + ++ S+ LV V + +FA T L FL + +L S Y RFNM + P TP ST + D + T Y++M+GSL++LT TR DI +V ARF S+PT++HL AVKR RYL+G ++ + Y + K LV YSDA + ST+G F+ + LV + S Q+ + ST +AE IA A C Q + + + +L + + + DN A+HI N Q SR+ H+AIR+ +D V ++ +++VS+++Q+ADI K + F L Sbjct: 1113 WLKAMHEELEQIEKNSTWELVPR---PSDKNVIGTKWVFRNKLNEDGQVVRNKARLVCKGYAQIEGIDFEETFAPVARLEAIRMFLALAAYKNFKVFQMDVKSAFLNGLLEEEVYIEQPDGFHSDKSSDLVCKLRKALYGLKQAPRAWYSRLDTYLRKIGFSKGLVDSNLYVKTEQSKQLVVIVYVDDIIFGGNDEEMCR---LFAKEMKTEFEMSMLGELSFFLGLQ---VQQLKHSIFISQLKYIKEMLKRFNMEDSKPVSTP---MSTSTKLSKDDKTSSVDHTTYRSMIGSLLYLTA-TRPDILQAVCMVARFQSSPTEEHLTAVKRIFRYLKGTMELGLCYPKGKSFTLVAYSDADWAGCIDDRKSTSGGAFYLGDRLVAWHSKKQDSVSLSTAEAEYIAAATCCTQVLWMRQMLSDLGVSTADPTPIFCDNTSAIHISKNPVQHSRTKHVAIRYHFLKDKVADGEVKLEYVSTTEQVADIFTKPLPKEVFEYL 1598
BLAST of mRNA_H-paniculata_contig14315.2608.1 vs. uniprot
Match: A0A1J3ITQ9_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ITQ9_NOCCA) HSP 1 Score: 201 bits (510), Expect = 1.780e-52 Identity = 161/500 (32.20%), Postives = 248/500 (49.60%), Query Frame = 1 Query: 1 WMEAMKKELHSLDEHQVADFIPASSIPPNHTVIGTRWVFKVKADG-----KFKARLVIQGWSQKHGIDCGSTFAPVCRLESQIMLLALATAKDWTVHALDVQVAFLNGKLKESV-------FYSTTRQIYVMSLKRSIYGLRQSP-------------IGTIPSTIS*GVWALHRPSRIL---VCTVNEATTTTS*LQNQWTNY*WMFATNS*TSSLSRTL-ERYRLFLAWRYCATNKLAPFSCHSTSSY----RFNMSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSR-SKLELVGYSDASYC-----TMSTTGTMFFSANELVHFAS*LQNISATSTTKAELIALAACTKQGIHLLGICRELELQLNSCQVRSDNRGALHIPANSNQSSRSIHLAIRFAAFRDWVRSKQLIIDHVSSSDQLADILIKRCERVTFARL 1383 W+ +M++EL + V + +P +P V+GT+W+FK K D + K+RLV QG+SQ G+D TFAPV RLES + L +A ++ VH +DV+ AFLNG L+E V F T YV LK+++YGL+Q+P G + T+ ++ L + I+ +C + TS + + N+ S T ++ E + L + T K F ST + +F + +TP + T T D + A Y+ M+GSL++LT +R D+CFSV AR+ + P Q HL AVK+ LRY++G ++ I YS+ S L G+ DA + ST+G F N L+ + S QN + ST +AE IAL +C Q I + + + ++ V DN+ A+ I N Q SR+ H+ IR R+ V KQ++++HV + QLAD+ K + F L Sbjct: 874 WIISMEEELEEFVRNDVWELVP---LPEGVNVVGTKWIFKNKTDDAGSIVRNKSRLVAQGYSQVEGVDFDETFAPVARLESIRLFLGIACILNFKVHQMDVKSAFLNGILQEEVYVAQPKGFEDPTHPDYVYKLKKALYGLKQAPKAWYEHLTKFLIDTGYVRGTVDKTLFILEKEDEIMMVQICVDDIIFGGTSEVLVE--NF-----VKSMTKEFKMSMVEELKYLLGLQVNQTEK-GIFISQSTYAKNLLEKFGLDKCKEARTPMSTT---TKIGKDEHGEDADVKLYRGMIGSLLYLTA-SRPDLCFSVGVCARYQAKPKQSHLQAVKKILRYVKGTVNLGIFYSKGSNRNLAGHCDADWAGCADDRKSTSGGCFLLGNNLISWLSKKQNSVSLSTAEAEYIALGSCCTQLIWMRQMSADYGMESGPFLVYCDNKSAIDISKNPVQHSRTKHIDIRHHFVRELVEDKQVVLEHVVTELQLADLFTKPLDFNRFVTL 1358 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14315.2608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14315.2608.1 >prot_H-paniculata_contig14315.2608.1 ID=prot_H-paniculata_contig14315.2608.1|Name=mRNA_H-paniculata_contig14315.2608.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp MEAMKKELHSLDEHQVADFIPASSIPPNHTVIGTRWVFKVKADGKFKARLback to top mRNA from alignment at H-paniculata_contig14315:146..1557+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14315.2608.1 ID=mRNA_H-paniculata_contig14315.2608.1|Name=mRNA_H-paniculata_contig14315.2608.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1412bp|location=Sequence derived from alignment at H-paniculata_contig14315:146..1557+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14315:146..1557+ >mRNA_H-paniculata_contig14315.2608.1 ID=mRNA_H-paniculata_contig14315.2608.1|Name=mRNA_H-paniculata_contig14315.2608.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at H-paniculata_contig14315:146..1557+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |