mRNA_H-paniculata_contig14314.2606.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14314.2606.1 vs. uniprot
Match: D8LH15_ECTSI (GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH15_ECTSI) HSP 1 Score: 249 bits (637), Expect = 3.570e-77 Identity = 130/151 (86.09%), Postives = 141/151 (93.38%), Query Frame = 1 Query: 1 GKSSILNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKTGSRDTSTPLEELAVKDSMNAINKAQVVVLVLDGMEGLLRKTELTIAATVAREGRALVLAANKSDLVQVGAREYAKGVVEQVEKLMPDVRAPPVVSVCALNG 453 GKSS+LNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRK+GSRDT+TPLEELAVKDSMNAI+KAQVVVLVLDG EG+LRKTEL+IA+ VA EGRALV+AANKSDL V EYAKGV+ QVE LMPDVRAPPV+SVCAL+G Sbjct: 333 GKSSLLNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKSGSRDTTTPLEELAVKDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDLSGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDG 483
BLAST of mRNA_H-paniculata_contig14314.2606.1 vs. uniprot
Match: A0A7S2LTB8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LTB8_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.130e-40 Identity = 78/153 (50.98%), Postives = 112/153 (73.20%), Query Frame = 1 Query: 1 GKSSILNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKTGSRDTSTPLEELAVKDSMNAINKAQVVVLVLDGMEGLLRKTELTIAATVAREGRALVLAANKSDLVQ--VGAREYAKGVVEQVEKLMPDVRAPPVVSVCALNG 453 GKS+++NA+L+++R +TG GLTRDA+AVEW+W G+ V+LVDTAGIRK R +E+LAV D++ A+ A V VLVLD G+L++ EL IA V +EGRALV+AANK D+++ V +E+A+GV EQ+E +P +R PVV++ +L G Sbjct: 125 GKSTLVNALLKQERVITGELAGLTRDAIAVEWSWEGRPVKLVDTAGIRKISQRVHDDSIEDLAVLDAVRAMKVADVAVLVLDAAAGMLQRHELAIADAVVKEGRALVVAANKWDILEDDVSRKEFAEGVSEQIEVRLPMLRRTPVVAMSSLRG 277
BLAST of mRNA_H-paniculata_contig14314.2606.1 vs. uniprot
Match: A0A7S4N241_9STRA (GTPase Der n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N241_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.790e-39 Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 1 Query: 1 GKSSILNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKTGSRDTSTPLEELAVKDSMNAINKAQVVVLVLDGMEGLLRKTELTIAATVAREGRALVLAANKSDLV---QVGAREYAKGVVEQVEKLMPDVRAPPVVSVCALNG 453 GKS+++NA+LR++R + G PGLTRDA+AVEW W G+ VRLVDTAGIRK G R+ S +E+LAV+D+M A+ A V VLVLD +L++ EL IA REGR+LV+AANK DL+ ++YA V EQ++ P +R PVV++ +L G Sbjct: 243 GKSTLVNALLRQNRVIAGSMPGLTRDAIAVEWEWRGRPVRLVDTAGIRKAGKRERSNDIEDLAVQDAMRAMKVADVAVLVLDAEARVLQRQELAIADAAVREGRSLVVAANKMDLLVEADYTRQQYADAVQEQIQVRFPMLRKTPVVAMSSLTG 396
BLAST of mRNA_H-paniculata_contig14314.2606.1 vs. uniprot
Match: A0A7S0CBQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBQ9_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.160e-39 Identity = 75/155 (48.39%), Postives = 111/155 (71.61%), Query Frame = 1 Query: 1 GKSSILNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKTGSRDT-STPLEELAVKDSMNAINKAQVVVLVLDGMEGLLRKTELTIAATVAREGRALVLAANKSDLV---QVGAREYAKGVVEQVEKLMPDVRAPPVVSVCALNG 453 GKS+++NA+L+++R +TG TPGLTRD+++V WTW + V+LVDTAGIRK+ +R +E++AV+D+M A+ A V VLVLD G+L++ EL IA V REGR+LV+ ANK DL+ + A++YA V +Q+E P +R PVV++ +L G Sbjct: 75 GKSTLVNALLKQERVITGATPGLTRDSISVNWTWNDRPVQLVDTAGIRKSSNRAKHGDDIEDMAVRDAMRALKVADVAVLVLDAEAGVLQRQELAIADAVVREGRSLVICANKMDLIVDQEYSAKQYAMDVSQQIELRFPMLRKTPVVAMSSLTG 229
BLAST of mRNA_H-paniculata_contig14314.2606.1 vs. uniprot
Match: A0A7S1BMN0_9STRA (GTPase Der n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMN0_9STRA) HSP 1 Score: 143 bits (360), Expect = 7.860e-37 Identity = 81/154 (52.60%), Postives = 106/154 (68.83%), Query Frame = 1 Query: 1 GKSSILNAVLREDRALTGPTPGLTRDAVAVEWTWG-GKAVRLVDTAGIRKTGSRDTSTPLEELAVKDSMNAINKAQVVVLVLDGMEGLLRKTELTIAATVAREGRALVLAANKSDLVQ--VGAREYAKGVVEQVEKLMPDVRAPPVVSVCALNG 453 GKS++LNA+L E+R ++GP+PGLTRDA++VE+ G+ VRLVDTAGIRK RD S +E+L+V+ S+ A+ A+V++LV+D G L KTEL +A V REGRALV+ ANK DLV V EY GV E V +P + PVV V AL G Sbjct: 400 GKSTLLNALLGEERVISGPSPGLTRDAISVEFMHSDGRVVRLVDTAGIRKISRRDASDTIEDLSVEGSLRALRLAEVILLVVDAASGCLSKTELALADAVVREGRALVVVANKYDLVADAVSPEEYQSGVAEHVAISLPVLEGTPVVPVGALEG 553
BLAST of mRNA_H-paniculata_contig14314.2606.1 vs. uniprot
Match: A0A024FVG9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FVG9_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.150e-36 Identity = 74/151 (49.01%), Postives = 100/151 (66.23%), Query Frame = 1 Query: 1 GKSSILNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKTGSRDTSTPLEELAVKDSMNAINKAQVVVLVLDGMEGLLRKTELTIAATVAREGRALVLAANKSDLVQVGAREYAKGVVEQVEKLMPDVRAPPVVSVCALNG 453 GKS++LN ++REDR LTGP PG+TRD+V V WT+G ++L+DTAGIR+ G RD S +E+L+V+DS +AI+KAQVV +V D E L +LTIA V +GR+LV+ ANK DLV V +Q+E + VR V+ AL G Sbjct: 167 GKSTLLNRIIREDRVLTGPEPGVTRDSVEVPWTFGAHEIKLIDTAGIRRHGKRDHSNKIEDLSVRDSFDAIDKAQVVAVVTDLCEKKLTHMDLTIAQRVIEQGRSLVIIANKCDLVTTSYEYELNRVRQQLEDSLAQVRGVTVLPTSALTG 317
BLAST of mRNA_H-paniculata_contig14314.2606.1 vs. uniprot
Match: A0A833X0A9_PHYIN (GTPase Der n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833X0A9_PHYIN) HSP 1 Score: 139 bits (349), Expect = 9.210e-36 Identity = 75/151 (49.67%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 1 GKSSILNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKTGSRDTSTPLEELAVKDSMNAINKAQVVVLVLDGMEGLLRKTELTIAATVAREGRALVLAANKSDLVQVGAREYAKGVVEQVEKLMPDVRAPPVVSVCALNG 453 GKS++LN ++R DR LTGP PG+TRD+V V WT+ G++++LVDTAGIR+ RD +E L+V+DS AI+ AQVVV+V+D E L +LTIA V EGRALVLAANKSDL + + +++ + VR PVV + AL G Sbjct: 248 GKSTLLNKIVRNDRVLTGPEPGVTRDSVEVPWTFHGRSIKLVDTAGIRRYSKRDHDDQIENLSVRDSFRAIDSAQVVVVVVDMSEPKLIHMDLTIAQRVIEEGRALVLAANKSDLAGASVDLEMQRIQNELQDSLAQVRGVPVVPISALTG 398
BLAST of mRNA_H-paniculata_contig14314.2606.1 vs. uniprot
Match: A0A662WTB4_9STRA (GTPase Der n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTB4_9STRA) HSP 1 Score: 139 bits (351), Expect = 9.730e-36 Identity = 73/151 (48.34%), Postives = 103/151 (68.21%), Query Frame = 1 Query: 1 GKSSILNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKTGSRDTSTPLEELAVKDSMNAINKAQVVVLVLDGMEGLLRKTELTIAATVAREGRALVLAANKSDLVQVGAREYAKGVVEQVEKLMPDVRAPPVVSVCALNG 453 GKS++LN ++R++R LTGP PG+TRD+V V WT+ G+ ++LVDTAGIR+ RD +E L+V+D+ AI+ AQVVV+V+D E L +LTIA V EGRAL+LAANKSDL + K + ++++ + VR PVV + AL G Sbjct: 306 GKSTLLNKIVRKERVLTGPQPGVTRDSVEVPWTFHGRPIKLVDTAGIRRYSKRDHDDQIENLSVRDAFRAIDSAQVVVVVVDMSEPKLIHMDLTIAQRVIEEGRALILAANKSDLAESNVELQLKRIQDELQDSLAQVRGVPVVPISALTG 456
BLAST of mRNA_H-paniculata_contig14314.2606.1 vs. uniprot
Match: A0A6A4DZD2_9STRA (GTPase Der n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DZD2_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.130e-35 Identity = 74/151 (49.01%), Postives = 100/151 (66.23%), Query Frame = 1 Query: 1 GKSSILNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKTGSRDTSTPLEELAVKDSMNAINKAQVVVLVLDGMEGLLRKTELTIAATVAREGRALVLAANKSDLVQVGAREYAKGVVEQVEKLMPDVRAPPVVSVCALNG 453 GKS++LN ++R DR LTGP PG+TRD+V V WT+ G+ ++LVDTAGIR+ RD +E L+V+D+ AI+ AQVVV+V+D E L +LTIA V EGRALVLAANKSDL + + +++ + VR PVV + AL G Sbjct: 249 GKSTLLNKIVRNDRVLTGPEPGVTRDSVEVPWTFHGRPIKLVDTAGIRRYSKRDHDDQIENLSVRDAFRAIDSAQVVVVVVDMSEPKLIHMDLTIAQRVIEEGRALVLAANKSDLAGANVEYEMQRIQNELQDSLAQVRGVPVVPISALTG 399
BLAST of mRNA_H-paniculata_contig14314.2606.1 vs. uniprot
Match: A0A1V9YIW5_9STRA (GTPase Der n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIW5_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.200e-35 Identity = 77/151 (50.99%), Postives = 105/151 (69.54%), Query Frame = 1 Query: 1 GKSSILNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKTGSRDTSTPLEELAVKDSMNAINKAQVVVLVLDGMEGLLRKTELTIAATVAREGRALVLAANKSDLVQVGAREYAKGVVEQVEKLMPDVRAPPVVSVCALNG 453 GKS++LN ++R+DR LTGP PG+TRD+V V W + G+ + LVDTAGIRK RD S +E L+V+D+ +AI+ AQVVV+V+D E L +LTIA V EGRALVLAANKSDLV+ E + + ++++ + VR PVV + AL G Sbjct: 245 GKSTLLNKIVRDDRVLTGPEPGVTRDSVEVSWNFQGRDITLVDTAGIRKYSKRDHSNQIENLSVRDTYDAISSAQVVVVVVDVSEDHLIHLDLTIAQRVIDEGRALVLAANKSDLVENAVAEIER-IRKELDGSLAQVRGVPVVPISALTG 394 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14314.2606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14314.2606.1 >prot_H-paniculata_contig14314.2606.1 ID=prot_H-paniculata_contig14314.2606.1|Name=mRNA_H-paniculata_contig14314.2606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp GKSSILNAVLREDRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKTback to top mRNA from alignment at H-paniculata_contig14314:598..5475+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14314.2606.1 ID=mRNA_H-paniculata_contig14314.2606.1|Name=mRNA_H-paniculata_contig14314.2606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4878bp|location=Sequence derived from alignment at H-paniculata_contig14314:598..5475+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14314:598..5475+ >mRNA_H-paniculata_contig14314.2606.1 ID=mRNA_H-paniculata_contig14314.2606.1|Name=mRNA_H-paniculata_contig14314.2606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig14314:598..5475+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |