mRNA_H-paniculata_contig14310.2604.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14310.2604.1 vs. uniprot
Match: A0A6H5KXL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL0_9PHAE) HSP 1 Score: 194 bits (494), Expect = 2.140e-49 Identity = 99/180 (55.00%), Postives = 120/180 (66.67%), Query Frame = 3 Query: 1716 GQEGEQYSIRFDAAARAPCVYFHAPDV*RCHRAVYHTGQDESVYKAFAREGTECVIRGVRG*RKKTEGLGEMVSTFQDEERGFVLNLSQDELARVDEFRQREE--RPPLKVTPGVPFLLPGNNREGFWGLTASEEQAIDVLDCLQVVEPDRQQAMETDHSVGHAKYLPEGLHVVNMNVQY 2249 G EG YS+RFD AA A C +FH P+ RC + V+H GQDES YKA+AREG E VIRGVRG RKKTEG GEMVS FQDE GF L +S +LA V+ R E + PL +PG+ FL G ++G+WG EEQ DV+D L+ ++PD Q E DHS GH K +GLHV NMNV+Y Sbjct: 234 GPEGGDYSVRFDQAAAAQCEHFHPPNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKPLTRSPGLRFLEYGKGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKY 413
BLAST of mRNA_H-paniculata_contig14310.2604.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE) HSP 1 Score: 192 bits (487), Expect = 1.280e-47 Identity = 95/178 (53.37%), Postives = 119/178 (66.85%), Query Frame = 3 Query: 1716 GQEGEQYSIRFDAAARAPCVYFHAPDV*RCHRAVYHTGQDESVYKAFAREGTECVIRGVRG*RKKTEGLGEMVSTFQDEERGFVLNLSQDELARVDEFRQREERPPLKVTPGVPFLLPGNNREGFWGLTASEEQAIDVLDCLQVVEPDRQQAMETDHSVGHAKYLPEGLHVVNMNVQY 2249 G EG +S+RF+ AA PC +FH P +C+R V H GQDESVYKA+AREG E V++GVRG RKKTEG GEMVS FQDE GF L L+ D L V+ R+ + + L +PG+ FL G N++G+WG +EQ D LD L V EPD Q +E DHS GH + +GLHV NMNV+Y Sbjct: 576 GPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQMEDALDVLDVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKY 753
BLAST of mRNA_H-paniculata_contig14310.2604.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 172 bits (436), Expect = 9.050e-41 Identity = 98/216 (45.37%), Postives = 119/216 (55.09%), Query Frame = 3 Query: 1710 AAGQEGEQYSIRFDAAARAPCVYFHAPDV*RCHRAVYHTGQDESVYKAFAREGTECVIRGVRG*RKKTEGLGEMVSTFQDEERGFVLNLSQDELARVDEFRQREE--RPPLKVTPGVPFLLPGNNREGFWGLTASEEQAIDVLDCLQVVEPDRQQAMETDHSVG----------------------------------HAKYLPEGLHVVNMNVQY 2249 A G EG YS+RFD AA A C YFH + RC + V+H GQDES YKA+AREG E VIRGVRG RK+TEG GEMVS FQDE GF L +S +LA V+ R E + L +PG+ FL G ++G WG EEQ DV+D L+ ++PD+Q E DHS G H K +GLHV NMNV+Y Sbjct: 517 ALGPEGGDYSVRFDQAAAAQCEYFHPTNKCRCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKRTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGCWGYDQFEEQVEDVMDVLEHIDPDKQIVFEVDHSSGPDAKPWTPVXXXXXXXXXXXXXXXXXXXXXXXXXHGKQREDGLHVSNMNVKY 732
BLAST of mRNA_H-paniculata_contig14310.2604.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE) HSP 1 Score: 170 bits (431), Expect = 3.720e-40 Identity = 101/223 (45.29%), Postives = 127/223 (56.95%), Query Frame = 3 Query: 1584 GNRRKDVRG*DVPLRDGWHGVRRVPCRFPGRRV*RAL*CCARAA--GQEGEQYSIRFDAAARAPCVYFHAPDV*RCHRAVYHTGQDESVYKAFAREGTECVIRGVRG*RKKTEGLGEMVSTFQDEERGFVLNLSQDELARVDEFRQREERPPLKVTPGVPFLLPGNNREGFWGLTASEEQAIDVLDCLQVVEPDRQQAMETDHSVGHAKYLPEGLHVVNMNVQ 2246 G+ +KDV V R V RVP R P A A G EG YS+RF+ AA PC +FH P + ++ V H GQDESVYKA+AREG E V++GV G KKTEG GEMVS FQDE GF L L+ D L V+ R+ + + L +PG+ FL G N++G+WG +EQ V EPD Q +E DHS GH + +GLHV NMNV+ Sbjct: 428 GHEKKDV----VVYRGKGARVHRVPRRSPAGDNGSVDRFDALRAELGPEGGHYSVRFEEAAALPCEHFHTPAKCKGNKEVRHIGQDESVYKAYAREGKEWVVQGVPGLWKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLWFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVK 646
BLAST of mRNA_H-paniculata_contig14310.2604.1 vs. uniprot
Match: A0A6H5KQB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB9_9PHAE) HSP 1 Score: 161 bits (407), Expect = 2.990e-38 Identity = 91/178 (51.12%), Postives = 109/178 (61.24%), Query Frame = 3 Query: 1800 RCHRAVYHTGQDESVYKAFAREGTECVIRGVRG*RKKTEGLGEMVSTFQDEERGFVLNLSQDELARVDEFRQREE--RPPLKVTPGVPFLLPGNNREGFWGLTASEEQAIDVLDCLQVVEPDRQQAMETDHSVGHAKYLPEGLHVVNMNVQYEDVPEWRGVDHALRRRAHHENC-GLE 2324 RC + V+H GQDES YKA+AREG E VIRGVRG RKKTEG GEMVS FQDE GF L +S +LA V+ R E + L +PG+ FL G ++G+WG EEQ DV+D L+ ++PD Q E DHS GH K +GLHV NMNV+Y G LR E C GLE Sbjct: 107 RCGKKVHHIGQDESAYKAYAREGKEWVIRGVRGLRKKTEGPGEMVSGFQDERHGFGLPISDADLAAVNAKRDEEGNGKKTLTRSPGLRFLEYGKGKDGYWGYDLFEEQVEDVVDVLEHIDPDMQIVFEVDHSSGHGKQREDGLHVSNMNVKYG------GKQKVLRDSVMTEGCLGLE 278
BLAST of mRNA_H-paniculata_contig14310.2604.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE) HSP 1 Score: 162 bits (411), Expect = 1.600e-37 Identity = 82/160 (51.25%), Postives = 102/160 (63.75%), Query Frame = 3 Query: 1716 GQEGEQYSIRFDAAARAPCVYFHAPDV*RCHRAVYHTGQDESVYKAFAREGTECVIRGVRG*RKKTEGLGEMVSTFQDEERGFVLNLSQDELARVDEFRQREERPPLKVTPGVPFLLPGNNREGFWGLTASEEQAIDVLDCLQVVEPDRQQAMETDHSVG 2195 G EG YS+RF+ AA PC +FH P +C+R V H GQDESVYKA+AREG E V++GVRG RKKTEG GEMVS FQDE GF L L+ D L V+ R+ + + L +PG+ FL G N++G+WG +EQ V EPD Q +E DHS G Sbjct: 543 GPEGGHYSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSG 702
BLAST of mRNA_H-paniculata_contig14310.2604.1 vs. uniprot
Match: A0A6H5JUX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX8_9PHAE) HSP 1 Score: 147 bits (371), Expect = 5.200e-33 Identity = 75/145 (51.72%), Postives = 94/145 (64.83%), Query Frame = 3 Query: 1815 VYHTGQDESVYKAFAREGTECVIRGVRG*RKKTEGLGEMVSTFQDEERGFVLNLSQDELARVDEFRQREERPPLKVTPGVPFLLPGNNREGFWGLTASEEQAIDVLDCLQVVEPDRQQAMETDHSVGHAKYLPEGLHVVNMNVQY 2249 V H GQDES+YKA+AREG E V++GVRG RKKTEG GEMVS FQDE GF L L+ D L V+ R+ + + L +PG+ FL G N++G+WG +EQ V EPD Q +E DHS GH + +GLHV NMNV+Y Sbjct: 458 VRHIGQDESLYKAYAREGKEWVVQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVKY 602
BLAST of mRNA_H-paniculata_contig14310.2604.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE) HSP 1 Score: 140 bits (353), Expect = 1.620e-30 Identity = 76/169 (44.97%), Postives = 96/169 (56.80%), Query Frame = 3 Query: 1716 GQEGEQYSIRFDAAARAPCVYFHAPDV*RCHRAVYHTGQDESVYKAFAREGTECVIRG-------------------VRG*RKKTEGLGEMVSTFQDEERGFVLNLSQDELARVDEFRQREERPPLKVTPGVPFLLPGNNREGFWGLTASEEQAIDVLDCLQVVEPDRQ 2165 G EG +S+RF+ AA PC +FH P +C+R V H GQDESVYKA+AREG E V++G VRG RKKTEG GEMVS FQDE GF L L+ D L V+ R+ + + L +PG+ FL G N++G+WG +EQ V EPD Q Sbjct: 586 GPEGGHFSVRFEEAAALPCEHFHTPAKCKCNRKVRHIGQDESVYKAYAREGKEWVVQGXXXXXXXXXXXXXXXXXXXVRGLRKKTEGPGEMVSAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTRSPGLRFLQYGKNKDGYWGYDEFKEQIXXXXXXXXVFEPDMQ 754
BLAST of mRNA_H-paniculata_contig14310.2604.1 vs. uniprot
Match: A0A6H5L5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X3_9PHAE) HSP 1 Score: 129 bits (323), Expect = 4.910e-27 Identity = 69/141 (48.94%), Postives = 87/141 (61.70%), Query Frame = 3 Query: 1827 GQDESVYKAFAREGTECVIRGVRG*RKKTEGLGEMVSTFQDEERGFVLNLSQDELARVDEFRQREERPPLKVTPGVPFLLPGNNREGFWGLTASEEQAIDVLDCLQVVEPDRQQAMETDHSVGHAKYLPEGLHVVNMNVQY 2249 G + + A+AREG E V++GVRG RKKTEG GEMV FQDE GF L L+ D L V+ R+ + + L P + FL NR+G+ G +EQ DVLD L V EPD Q +E DHS GH + +GLHV NMNV+Y Sbjct: 412 GPEGGHFSAYAREGKEWVVQGVRGLRKKTEGPGEMVPAFQDERHGFGLPLTDDVLQAVNARRKEKGKEVLTQRPDLRFLQYWKNRDGYRGYDEFKEQIEDVLDVLNVFEPDMQVVVEIDHSSGHTRKREDGLHVGNMNVKY 552
BLAST of mRNA_H-paniculata_contig14310.2604.1 vs. uniprot
Match: A0A6H5JK30_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK30_9PHAE) HSP 1 Score: 103 bits (257), Expect = 6.740e-20 Identity = 97/293 (33.11%), Postives = 132/293 (45.05%), Query Frame = 1 Query: 817 AAA*EWGKAASTVSGIQQARLYMQVMTMLDLLEEEHVRDLLIVEHTPVALKVV-EFTGAASSDAVPNAAKTVAEEAMEEASLVRLTNSFLLIAGKVTDR*GRRFSPMKILSWTRQFRQLGGYFKRDGRRVDPERGRPRYGADRLA*GPEAYHNEEDSRFHQHRAACGRGRGLAASKV*VSPAHLHNHRQRVDAQAGVQG*PRQAIILH*WSREA*CQSGLQVLVRRARKLASRKQCWMRMERS*LMETKQEAFNGQREIGEKTFAAEMFHFEMDGTEYVEFRVDFLGGGSDER 1692 AAA E G+ A TVS Q +RLY Q M +L++LEEE RDLLI HT A + + ++ S A AA+ VA EAM+EAS+VRL NS LLIA K S +L C R + + ++ ++RV Q + + EA ++ +R+ R+LA RK CW+ +E S L +Q AF Q+E G + F+AE F+FE DG EY+EF VDFLG GSD+R Sbjct: 88 AAAVEGGEDA-TVSKAQLSRLYSQAMVVLEVLEEERTRDLLISMHTSAAYRALCTAHDSSKSFAQVKAAEDVATEAMDEASIVRLDNSLLLIAEK---------SAKDVL-------------------------------------------------------CKREWIMTEDDLSLAFLDWLKAQKRVTTQKAWK-----------FINEA-----RKLYLRKQRQLALRKSCWVAVELSSLSADEQAAFQEQKETGPEKFSAETFYFEADGKEYLEFHVDFLGNGSDQR 299 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14310.2604.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14310.2604.1 >prot_H-paniculata_contig14310.2604.1 ID=prot_H-paniculata_contig14310.2604.1|Name=mRNA_H-paniculata_contig14310.2604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp MVSTFQDEERGFVLNLSQDELARVDEFRQREERPPLKVTPGVPFLLPGNNback to top mRNA from alignment at H-paniculata_contig14310:671..3941- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14310.2604.1 ID=mRNA_H-paniculata_contig14310.2604.1|Name=mRNA_H-paniculata_contig14310.2604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3271bp|location=Sequence derived from alignment at H-paniculata_contig14310:671..3941- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14310:671..3941- >mRNA_H-paniculata_contig14310.2604.1 ID=mRNA_H-paniculata_contig14310.2604.1|Name=mRNA_H-paniculata_contig14310.2604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=822bp|location=Sequence derived from alignment at H-paniculata_contig14310:671..3941- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |