mRNA_H-paniculata_contig143.2599.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig143.2599.1 vs. uniprot
Match: D7G485_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G485_ECTSI) HSP 1 Score: 314 bits (805), Expect = 8.440e-92 Identity = 269/666 (40.39%), Postives = 322/666 (48.35%), Query Frame = 1 Query: 370 KNPLLVALADALAGALGSVVAVLAFYPIDIAKTRTQALC--------------GGSAATTQRRGSPPI--------------------FRSRTLSALVSLVRREG-LMRLYEGVEAKTLQSFMGSFVYFYAYAFIKGALRRRTD--------GRSLRPSLNLLAAALAGAVNQAFTLPLENITTRMQTSSSSTTTMKNPGPLTTSGCRTIITTAATGEGNSGAGRNVNSGVGGQRTEDDEKSEGSGDEAVTERYCEGGGEVGEEAGRHRANSSSNSDLAPPADGI-IGIHRKGSELSGGLKLRHTPPRLPSPXXXXXLDSHEHQQYPSRRRVPRQDGRRQSVWTVARELYIEEGKGVARFWRGFAPSLILTCNPAINYTAFDFLKALWLRRRVASDPMGNNGAGPDATKVGAEVSGGSVSVPRGRAVGGDFLNPVEAFFIAAAAKSLATLVTYPLIRAKVILMTSPSLSXXXXXXXXXXXXXXXXXXXXXXXXXXDEAQQSGEQTARTGDQLLGHVVTDDRN--DRSITHAG---AAISPAATXXXXXXXXXXXTAAGIPSLVTASSGTGPEGNMTLERIVVVMDTDGDLTATEKETRRYRGGVRQMGGVIVRIVRHDGVRGLYSGCGAQLVHTILKSALLLATKEEIARAATSAVFWGGGLGPRA 2220 + LL AL+DALAGALGSVVAV FYPIDIAKTR QA GG ++T+ + P FRSRTL+AL+S+VR EG L RLYEG+EAK LQ+ +GSFVYFYAYAFIKG +RR + LRPSLNLLAAA+AGAVNQAFTLPLENITTRMQT+ QRT E ++G G GE G SS P DG G+ G++ +G R P + D+ Q P +R R RQSV V ELY EG G+ RFWRGFAPSLILTCNPAINYTAFD LKALWLRRR A+ G+ +T GA G FLNP+EAF +AAAAKSLATLVTYPLIRAKV+LMT+PS G G +G + R+ D +++ G AA + +G P + AS G+ E V +A + G + M V+V I R +G+ GLY+GCGAQL+HTILKSALLLATKE+IARAA SA+F GG RA Sbjct: 36 RGALLAALSDALAGALGSVVAVAVFYPIDIAKTRAQASSPVTTRSRHDHDESSGGHGSSTEESSTAPEGGRVGSSNTALAGDGRRRVWFRSRTLAALLSIVRTEGGLTRLYEGIEAKVLQALLGSFVYFYAYAFIKGLMRRXXXXXXXXXXASKPLRPSLNLLAAAMAGAVNQAFTLPLENITTRMQTAP-------------------------------------------QRTPSVENNDGEG--------------AGERGGHGAMEGSS------PLDGRRCGV---GNDTNG--TWRDPVPATTAKVTQAGGDN----QAPIKRGQRRP---RQSVAAVTGELY-REGGGLGRFWRGFAPSLILTCNPAINYTAFDILKALWLRRRDAAAVAAGVGS---STTAGASXXXXXXXGTEG------FLNPLEAFLVAAAAKSLATLVTYPLIRAKVVLMTAPSSPSAPIVDRGRGNCSSPAVPPAASASQL--ITPKGHVFGSCGSGKIGEPTGEGRDGGDERLSNNGEERAATAXXXXADADATGMSDRGGSGHP--IDASLGSAAA-----ESTVAASSA----SAVGRGEGTTGGEMHSMATVLVDIFRREGIGGLYAGCGAQLLHTILKSALLLATKEQIARAAASALFLGGSSRGRA 603
BLAST of mRNA_H-paniculata_contig143.2599.1 vs. uniprot
Match: A0A835YZE1_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE1_9STRA) HSP 1 Score: 151 bits (382), Expect = 6.280e-35 Identity = 179/621 (28.82%), Postives = 240/621 (38.65%), Query Frame = 1 Query: 382 LVALADALAGALGSVVAVLAFYPIDIAKTRTQALCGGSAATT-------------------QRRGSPPIFR---SRTLSALVSLVRREGLMRLYEGVEAKTLQSFMGSFVYFYAYAFIKGALRRRTDGRSLRPSLNLLAAALAGAVNQAFTLPLENITTRMQTSSSSTTTMKNPGPLTTSGCRTIITTAATGEGNSGAGRNVNSGVGGQRTEDDEKSEGSGDEAVTERYCEGGGEVGEEAGRHRANSSSNSDLAPPADGIIGIHRKGSELSGGLKLRHTPPRLPSPXXXXXLDSHEHQQYPSRRRVPRQDGRRQSVWTVARELYIEEGKGVARFWRGFAPSLILTCNPAINYTAFDFLKALWLRRRVASDPMGNNGAGPDATKVGAEVSGGSVSVPRGRAVG--GDFLNPVEAFFIAAAAKSLATLVTYPLIRAKVILMTSPSLSXXXXXXXXXXXXXXXXXXXXXXXXXXDEAQQSGEQTARTGDQLLGHVVTDDRNDRSITHAGAAISPAATXXXXXXXXXXXTAAGIPSLVTASSGTGPEGNMTLERIVVVMDTDGDLTATEKETRRYRGGVRQMGGVIVRIVRHDGVRGLYSGCGAQLVHTILKSALLLATKEEIAR 2172 + ALADALAG++GS +A + F+P+D AKTR QA GS+ T +R + R SRTL+AL+ + REG L+ G++AK L + F+YFYAYAF+K + L+LL AALAGA+N TLP++N+ TR+QT+ + P + +T T + T E G G+ G + S D +G G+ ++ L+ XXXXX S+ +L+ +EG GV RFWRG PS+ILTCNPAINYTAFD LKA +L R V RGR G +FL P+ AF +AAAAK++ATLVTYPLIRAKVI+MT RT +Q GP GDL + I R +G+ GLY+GCG QL+HTILKSALL+A++EE+A+ Sbjct: 1 MAALADALAGSIGSCIAAILFFPLDTAKTRVQASHSGSSDTDGSGXXXXXXXXXXXSAVERSQRSDAAVRRVLGSRTLAALLDVYTREGPSALFRGLDAKVLSALSSGFIYFYAYAFLKVPV-----------PLSLLTAALAGAINMLLTLPIDNVCTRLQTADAPA----QPPARRDGESKAAVTHGETAQ-------------------------------QTPSAVEAGDAGGDGNGAPQQQQHSE-------DVSVG----GTPVATSLREXXXXXXXXXXXXXXXXXXXX-------------XXXXXSLSAAVADLH-DEG-GVPRFWRGLLPSMILTCNPAINYTAFDALKAAYLARWVN----------------------------RGRPPGHHAEFLGPLAAFGLAAAAKAVATLVTYPLIRAKVIMMTRK----------------------------------------RTAEQ-----------------------------------------------------GP----------------GDLMQC-----------------LADIARLEGLHGLYAGCGGQLLHTILKSALLVASREEVAK 395
BLAST of mRNA_H-paniculata_contig143.2599.1 vs. uniprot
Match: A0A8K1FIS1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIS1_PYTOL) HSP 1 Score: 98.6 bits (244), Expect = 3.190e-18 Identity = 61/145 (42.07%), Postives = 88/145 (60.69%), Query Frame = 1 Query: 388 ALADALAGALGSVVAVLAFYPIDIAKTRTQALCGGSA--------ATTQRRGSPPIFRSRTLSALVSLV-RREGLMRLYEGVEAKTLQSFMGSFVYFYAYAFIKGALRRRTDGRSLRPSLNLLAAALAGAVNQAFTLPLENITTR 795 A DA AGA+G+V A + YP+D+ KTR Q S A TQ+ P + + R++ AL L+ + EG+ L+ G+ +K + +F+ SF YFY Y+F+K A RRT G+ + +NL+ AALAGA+N + TLPLE I TR Sbjct: 15 AFVDASAGAMGAVFAAVLLYPLDVVKTRQQVAVDDSKDKKEEDKEAKTQQL-QPHVKKQRSMWALCWLIYKAEGVEGLFAGLSSKVVHTFISSFAYFYWYSFLKQATERRT-GKGITTGMNLIVAALAGALNMSMTLPLEMINTR 157
BLAST of mRNA_H-paniculata_contig143.2599.1 vs. uniprot
Match: A0A485L1K8_9STRA (Aste57867_14785 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1K8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.060e-15 Identity = 59/144 (40.97%), Postives = 83/144 (57.64%), Query Frame = 1 Query: 388 ALADALAGALGSVVAVLAFYPIDIAKTRTQALCGGSAATTQRRGSPPIFRSRTLSALVSLVRREGLMRLYEGVEAKTLQSFMGSFVYFYAYAFIKGALRRRTDGRSLRPSLNLLAAALAGAVNQAFTLPLENITTRMQTSSSST 819 AL +A AG+LG++ VLA +P+D+AKT+ QA S + R P R + EG+ L+ GV K + + +F YFY Y+++KGA R T G L S NL ALAGA+N + TLPL+ I+TR+QTS +T Sbjct: 7 ALVEATAGSLGALFGVLALFPLDVAKTKQQAATDKSKK--EERAPLPQLIQR-------IYEEEGVAGLFSGVGPKAAHTILSNFFYFYWYSWLKGAYER-TRG-PLTTSANLAIGALAGAINMSITLPLDVISTRIQTSKDTT 139
BLAST of mRNA_H-paniculata_contig143.2599.1 vs. uniprot
Match: A0A6G0XCA7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCA7_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 6.570e-14 Identity = 56/148 (37.84%), Postives = 91/148 (61.49%), Query Frame = 1 Query: 388 ALADALAGALGSVVAVLAFYPIDIAKTRTQALCGGSAATTQRRGSPPIFRSRTLSALVSLVRREGLMRLYEGVEAKTLQSFMGSFVYFYAYAFIKGALRRRTDGRSLRPSLNLLAAALAGAVNQAFTLPLENITTRMQTSSSSTTTMK 831 AL +A AG+LG++ A L +P+D+AKT+ QA S T+++ + TL+ + + EG+ L+ G+ K + + +F YFY Y+++K AL +T G L + NL ALAGA+N TLPL+ ++TR+QTS +ST+T++ Sbjct: 4 ALVEASAGSLGALFACLVLFPLDVAKTKHQA----STDKTEKKKT-------TLTIVKKIYDEEGIAGLFVGLGPKAAHTVLQNFFYFYWYSWLK-ALYEKTRG-PLTTTANLSIGALAGAINMTITLPLDVVSTRIQTSDASTSTVE 138
BLAST of mRNA_H-paniculata_contig143.2599.1 vs. uniprot
Match: A0A7S0GM55_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GM55_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 6.890e-14 Identity = 119/438 (27.17%), Postives = 173/438 (39.50%), Query Frame = 1 Query: 388 ALADALAGALGSVVAVLAFYPIDIAKTRTQALCGGSA--ATTQRRG---SPPIFRSRTLSALVSLVRREGLMRLYEGVEAKTLQSFMGSFVYFYAYAFI---------------KGALRRRTDGRSLRPSLNLLAAALAGAVNQAFTLPLENITTRMQTSSSSTTTMKNPGPLTTSGCRTIITTAATGEGNSGAGRNVNSGVGGQRTEDDEKSE--GSGDEAVTERYCEGGGEVGEEAGRHRANSSSNSDLAPPADGIIGIHRKGSELSGGLKLRHTPPRLPSPXXXXXLDSHEHQQYPSRRRVPRQDGRRQSVWTVARELYIEEGK-GVARFWRGFAPSLILTCNPAINYTAFDFLKALWLRRRVASDPMGNNGAGPDATKVGAEVSGGSVSVPRGRAVGGDFLNPVEAFFIAAAAKSLATLVTYPLIRAKVILMTS 1632 A ADA++GA+GS+VA+LAFYP DI KT QA S+ AT R S ++ S+L S + + GV K + SFVYF+ ++F +G ++ + S L + L+ +N TLPL+ I+ R QTSS +IT A G+ N +N ED + S+ S E+ CE +EAG N S ++L + K +H R+++ T E GK + W+G PSL+L NPAI YTAFD +K+ + + P +VS ++S+ E FF+ AAK LAT+VTYPLIRAKV++M + Sbjct: 10 AAADAVSGAVGSLVALLAFYPADIMKTNLQAAASSSSISATNDRNNCDKSKEEHMNKVDSSLDSGLLSHPFSYYFRGVHYKAAHTVTSSFVYFFFHSFFVSTYXXXXXXXXXXXRGKIKVNKSKVDISTSTRLFLSFLSAVLNTLVTLPLDVISARKQTSSPK-----------------LITDATLGDNNRPPVVKLNK-------EDTDSSDICTSMLSLSEEKKCE----FKDEAGCLARNKSLTNELM--------------NKNSRNKNQHV---------------------------------RENIVTNCDE----HGKPSFSHLWQGLYPSLVLCSNPAIQYTAFDVIKSQIMAYKKVKWPD--------------KVSKHNLSM-------------FEIFFVGIAAKFLATIVTYPLIRAKVLIMVT 341
BLAST of mRNA_H-paniculata_contig143.2599.1 vs. uniprot
Match: A0A4P9XDV2_9FUNG (Uncharacterized protein n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XDV2_9FUNG) HSP 1 Score: 82.4 bits (202), Expect = 4.040e-13 Identity = 57/143 (39.86%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 382 LVALADALAGALGSVVAVLAFYPIDIAKTRTQALCGGSAATTQRRGSPPIFRSRTLS-ALVSLVRREGLMRLYEGVEAKTLQSFMGSFVYFYAYAFIKGALRR-RTDGRSLRPSLNLLAAALAGAVNQAFTLPLENITTRMQT 804 L DA+AGALG+V+A A YP+D+ KTR Q T + R R+LS L+ + EG LY G+ A TL + SF YFY Y+++ RR R G+ L L+ ALAGA++Q +LP+ TTR QT Sbjct: 3 LTPFGDAMAGALGAVLANTAIYPMDVVKTRLQ-------VQTPSPSPSGVSRYRSLSDGLMQIYCEEGAAGLYSGLAAGTLGTIASSFSYFYCYSWVHTVYRRLRHSGKPPGTVLELVLGALAGAMSQLVSLPVAVATTRQQT 138
BLAST of mRNA_H-paniculata_contig143.2599.1 vs. uniprot
Match: A0A662WK54_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WK54_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.230e-12 Identity = 50/127 (39.37%), Postives = 72/127 (56.69%), Query Frame = 1 Query: 1243 DGRRQSVWTVARELYIEEGKGVARFWRGFAPSLILTCNPAINYTAFDFLKALWLRRRVASDPMGNNGAGPDATKVGAEVSGGSVSVPRGRAVGGDFLNPVEAFFIAAAAKSLATLVTYPLIRAKVIL 1623 +G R+ +W +A+E+Y E+G + FW+GF PS++L NP+INYT FD LK R+ M + A A VS L +EAF +AA AK++AT+VTYP+IRAKV++ Sbjct: 155 EGHRRGMWELAKEIYAEDG--LQSFWKGFIPSMVLVSNPSINYTIFDKLKL-----RLQMSKMAASNA--------ARVSS---------------LTALEAFLLAAIAKAVATIVTYPVIRAKVLM 251
BLAST of mRNA_H-paniculata_contig143.2599.1 vs. uniprot
Match: UPI001E8E6E92 (mitochondrial carrier n=1 Tax=Lentinula edodes TaxID=5353 RepID=UPI001E8E6E92) HSP 1 Score: 81.3 bits (199), Expect = 1.310e-12 Identity = 56/153 (36.60%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 367 AKNPLLVALADALAGALGSVVAVLAFYPIDIAKTRTQALCGGSAATTQRRGSPPIFRSRTLSALVSLVRREGLMRLYEGVEAKTLQSFMGSFVYFYAYAFIKGA----LRRRTDGRSLRPSLN----LLAAALAGAVNQAFTLPLENITTRMQ 801 AK L LA ALAGALG+ + YP+D+AKTR QAL + +G S + ++ + R+EGL+ LY G A L +F + YF+ Y+F++ + + R+ S P+L+ LL A AGA+ Q FT+P+ I TR Q Sbjct: 5 AKPQTLTPLAAALAGALGACFSTAVVYPLDVAKTRIQAL-------PKSKGKDD---SSMFALIIRIFRKEGLLALYSGFGATMLNTFSMQYAYFFFYSFVRNSYISRITRKLPKGSKAPALSTAAELLLGAAAGALAQIFTIPVSVIATRQQ 147
BLAST of mRNA_H-paniculata_contig143.2599.1 vs. uniprot
Match: D8Q3T9_SCHCM (Uncharacterized protein n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8Q3T9_SCHCM) HSP 1 Score: 80.9 bits (198), Expect = 1.360e-12 Identity = 56/148 (37.84%), Postives = 75/148 (50.68%), Query Frame = 1 Query: 382 LVALADALAGALGSVVAVLAFYPIDIAKTRTQALCGGSAATTQRRGSPPIFRSRTLSALVSLVRREGLMRLYEGVEAKTLQSFMGSFVYFYAYAFIKGA----LRRRTDGRSLRPSLN----LLAAALAGAVNQAFTLPLENITTRMQ 801 L A ALAGALG+ + YP+D+AKTR QAL T L L+ + +REG+M Y G A L +F + YF+ YAF++ + LRR S P L+ LL A+AGA+ Q FT+P+ I TR Q Sbjct: 6 LTPFASALAGALGACFSTAVVYPLDVAKTRIQALPSDGPKTKAD--------VSMLRVLLRVYKREGIMGWYRGFAATMLNTFSMQYAYFFFYAFVRSSYIARLRRNAPKGSALPPLSTAAELLLGAIAGALAQIFTIPVSVIATRQQ 145 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig143.2599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig143.2599.1 >prot_H-paniculata_contig143.2599.1 ID=prot_H-paniculata_contig143.2599.1|Name=mRNA_H-paniculata_contig143.2599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=631bp MSSSRTMRPPAPAKNPLLVALADALAGALGSVVAVLAFYPIDIAKTRTQAback to top mRNA from alignment at H-paniculata_contig143:4271..11085+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig143.2599.1 ID=mRNA_H-paniculata_contig143.2599.1|Name=mRNA_H-paniculata_contig143.2599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6815bp|location=Sequence derived from alignment at H-paniculata_contig143:4271..11085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig143:4271..11085+ >mRNA_H-paniculata_contig143.2599.1 ID=mRNA_H-paniculata_contig143.2599.1|Name=mRNA_H-paniculata_contig143.2599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3786bp|location=Sequence derived from alignment at H-paniculata_contig143:4271..11085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |