mRNA_H-paniculata_contig1429.2596.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1429.2596.1 vs. uniprot
Match: D8LBA8_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA8_ECTSI) HSP 1 Score: 1087 bits (2810), Expect = 0.000e+0 Identity = 925/2324 (39.80%), Postives = 1182/2324 (50.86%), Query Frame = 1
Query: 1 LAPELGLHGIPSRSLIEFEGGGNMLSHNILGEMLAANEPGILNERSAGARRTGSEWGKRSRCKEQGSMIARRWGRGTVVDDGPTEEGK-QVRLLSQADAIAWLRESERANLVEWPEVDTQDSTQRRDNSAAAC-------VGVADVAQQPAVQSTTIGG---------TTCACSS------SPTHGRRHSPTRARSRTRSPVKLYDHDNNPRVLRSLVDNTVETGLVG-GILKAEEHQRIDELKLQLELASHHAIELEDKIFQSQTGAPHRELLGELQLELQRTQNILQPEGRQPKITAVTRTAGYELTNGTQTNRSTKNREKCVERNKVTECLHPSGTRSTPRSRHRNEQHNSSLKWARGGVTSTGKKSEINMLSSSFKC------RRGKNSNNPTLSSIPVFKSPSLPSPLPTPTSSLRRYLSSLRPFSADSARAAWGLGEPEEQFDGSPWDAASSLHDTDASVNFHQRHLWPVLFVIGSTQRPMDRHPLAVCSLPLFDDELVFCLAKAIGESVEKVRTAIKILSQFDSSHFQAMMKNLCRTEDSASNDHSQNVDGRGEGVAAKRTLVGIPSEGQMGRNWVRDGSQISLEETTTSSKKVPYILRG---------RLDCVDEPVVISEAAASRVLTAGPLVGVFGDNTVKVILDVSRPWIVFDS--------------GGTLDTELGFLTEKTKDLTKSMAKKVPVHHPNEKKSSEKAVVIRGEKETGSRISDRDACD-YPSRTFGIVRSPPDGADNGKGGTLIVARERTMGQDEDEVNCSDPAITSPAHADGSSC-------TAIVTQSKSGEEGVLVGQLVSAAAVRFRVYSVAVGLCYEGRRPSVSYSSSMRSFELESSRNIFIGGRGGSCRDWRRG-EFDGNRCRSMRSRPASANSDELGLPPLKLRKGDKRRFPRGLWRAGAGGSEESAAEPNVCLADGFGAERDENDFDWVRPRSTPRCLRPGFKGDVTSAMLRQELEACENNAARLSVSMVRKAEAWTKESQLSHSTATTAAAEAIQEATALELAGTRA----QDELIEAAKYRMRNIVDFMYLRLIRRSWSTWIEQTRRCRSLESAERLTRLVGAAALAHGVLEPFLRRRKRFWLRRWAAAMRAERVLEVQAAAVELQRITRGFVGRGRARGVRKYHAXXXXXXXXXXXXXXXXXARRERYLRECRAVKTIETKYREVVWHRNAQKLKKMRRRENAATRVKAVWRACVGGRRPXXXXXXXXXXXXXXXXXXXXXXGVIARVEADALLDAKVQREAATRIQAVARGRSARRSYYYAISRERAATRLSCFWRCASARAEKRRRHHRLRLALMVNSLVRGFLGRLGGHATREERRRKQQALLVGCVFAQKLFRGKQGQLKARRELQRKCAAVELQRIVRGHRVRRTSQLEEDKLRNQLVTWRVXXXXXXXXXXXXXXRNFGQWVADDVQRRAAFTIQSAYRRFVAHRCRRLRRLS--LAARNNALNIA---GHESVSNIDNDQAKRRSLHRGGKRGAATMAITDD--GNLSNSTSRKRDWDNVNSDESSEGASQEGGHNEXXXXXXXXXXXXXXXHGDHGLDGEGIENPEVV---------YEDMGDVVLVEITSSHTEQTPVLPEAPEGVVLVAVPPRSVPESHGVVAVVVPSAAPPAF--EATLEYYEAKRRYLAVQEAAHGASALQIQTIFRAFAGRCKAAITRAHNCELAQIQACRGRAAVIVQARARGRAALKVAKEKRALLEKVERRKRGVITLQCAVRCFMAKSQLKNLRAEEKARQDRVNRMAARIQAQARGVQTREVWSKFFHSRALLERERQRQGAQKIQCTWRSRLARTEGERRKSVRDEALLAELLEKHLMTLLQPALEAERRHAYAVRLQCWWRGILAMKSKRRRGRELRETPISEVKHEEENAACVIQCHWRATKARHFYNDNYASLFRERERKKYCTECQGEYATRKCHTCLDKFCENCWTRIHGKGVRRFHHWEPFAIFPYNAAFLQQSGSADRQQHQVNGNANDWGTTATAGGELTAYTSNTQQQGSMESPAQYDYSYYGTDLTH-YINYDYNNARAAVGTPPIAGDHFLQQEDPQQQFEATQDPDKSWCTEQPIVSTANDAGKHGGEYGGATAYDKGWEAVEQPYSSDGNNPYYYPQQDGSYSDPTTSDQMLADGSITTESSTAEGGQEGYDYEGATIFDQPNQTGGTSDTAGWEWTAPESHNSDDHSTLGTGTNNGPPWSVNEYDQKVNGEWMEYWDESAQAGYSSGTRTAGGTRGVNGETDTSMTGTSSGPSWSVNEYDQRFNGDWVEYWDESAQAGYFYNIVTGEAS 6717
L ELGLHG+P++SLIEFEGGG+MLS +LGEMLA N+ G+LN R ++ KR+R +E G+ AR G+G+ DG E + Q RLL QA+A L ES + + ++D + ST+R N+ QQ A Q+ I G T C + SP RRH K YDHD+NP+VLRSLVD+T+ TG+ G G LKAEE +++++L+LQL LA H A ELED+IFQSQTG+PHRELLGELQL+ + N P +P G +G + +R+T E+C +G RS R RHR S K R + + L+ S RR N ++ + P +SP L TPT+SLRRYLSSLRPFSA+SARAAWGL +P G+P A + D + Q WPVLFV+G ++ P RHPL+V +LPLFDDE+V LA A GE KVR +++LS FD Q+ +K LC +H A+ RTL G + G GR+ R G+ E S P L G VDEP+++SEAAA R LTAG L GVFG++ V+ I+ SRP +VFDS GG + E + S A + E+ SS + GE E + ++ D PS +G+ + R G + + SP G++ + +V + EEGVLV QLV AA RFRV+S+AV G + ++ R F R I+IGG G S W G + G R R RPASA SDELGLPPLKL + DKR R R G E E +V F RPRSTPRCLRPG+KG+VT+AMLRQELEA E+ AARL ++M RKAEAW E+Q TA AA+ A + L+E+A RMR ++ MYLR IRR W W E TRR RS+E+A R+ RLVGAAA+ VLEPFLRRR R WLRRWA AMRAERVLEVQAAAVELQR RGF+G+ RA + AXXXXXXXXXXXXXXXX ARR R + E RAV TIE KYRE VW R+A KL ++R+E AAT+++A W V GRRP GV+AR AD L++AK +REAA +IQAVARG AR+ Y I RERAA +S FWRCA AR R++ LA +N LVRGFL R E R R+ +A++V CV AQK+FRGK+G+LKARREL R+CAAVELQRIVRG VRR S++EE + R+Q +W R GQ A+ AAFTIQSA+RR R R+ R L + A N A + GH +VS A G + A T + G + +++ E + GA+ G HG G +++P V YEDMGDV + + S + + V+ P+ PP E LEYYEAK RYLA QE AHGASA +IQ +FRA+ R +AA A + + RA + + RR++G++T+QCAVRC++ K +L+ LR E+ +Q+ + RMAARIQA RG+QTR +W KFF SRALL+RERQR GAQ+IQ WRS+LARTE ERR+SVRD ALLAE LE+HL LL+ +EAERRHAYA+RLQCWWRGILA+K K R+ L ETP +V E+E AA A KAR FYN NYA L+RERER+K CTECQ EYATRKC TC DKFCE CW RIH G RRFH W PFA Y+ + Q + +A G T GGEL + + P Y Y G++ + ++ V + G + + +K W ST ++ G Y GA +YD G A+ SSD YYP D + A G TTE S G + A + + G AG W + G + G W+ + NG+ D S + G + G +G+S WSVNEY QR GDWVEYWD++AQA YFYN +GEAS
Sbjct: 32 LVQELGLHGVPAQSLIEFEGGGSMLSREVLGEMLAVNDHGVLNARVGATEKSDGGRSKRARRRE-GASSARSRGKGS---DGKVVENRIQTRLLCQAEAPKCLGESSSSPSRVFAKIDPRKSTKRCHNNGVESRQRHYHDQQALLAEQQRAKQTALIDGDGMNRQRATATAHCEAQQKVAGSPNKRRRH-------------KRYDHDHNPKVLRSLVDDTIITGIAGAGALKAEEGRQMEDLRLQLRLACHRATELEDQIFQSQTGSPHRELLGELQLD-RAAGNTGIPLLERPSWKERNFVLG-PTGSGAKAHRNTDVLERC-------RSPDGAGGRSPLRPRHRV----SPRKTRRTPLDVSFSTEPPQRLAGSSSLATDIIPRRQANVSDMVTTCHPP-QSPPL-----TPTASLRRYLSSLRPFSANSARAAWGLADPANG--GNP--LAGPVTDLTHPFDNGQPR-WPVLFVMGESKPPPPRHPLSVHALPLFDDEMVALLAGAAGEPAAKVRMMVQLLSCFDVRLLQSAVKRLCC-------EH-----------ASSRTLGGA-ARGGRGRHLQRSGAPGPATEAWGRSPMPP--LPGPSAAGDAAHSSTSVDEPLLMSEAAARRALTAGFLGGVFGEDAVRDIVVASRPVVVFDSTESAKGKALTPPLQGGAVGGERQNDRGDRPEGGSSRAPSWKIGKNAEQDSSSRG----GEDEAAATAANEDVTSSLPSVEHRRTWEERNGSSENR---------RAQGDSPPCTDAGSLLVNSPRREGGTALGKRQLEVSELVEHDSNPEEGVLVAQLVRAATARFRVHSLAVQHHEHGGVTATNH----RDF----GRGIYIGGSGAS--GWTEGGQEPGQRLR----RPASAGSDELGLPPLKLARKDKRTRRR---READAGRREEEVEFDV--------------FGVPRPRSTPRCLRPGYKGEVTAAMLRQELEASESTAARLGITMARKAEAWKTEAQ--EGTAAAAASCAXXXXXXXXXXXXXXXXXXHEALLESAHDRMREAMNIMYLRTIRRGWGAWAELTRRQRSIEAAGRVARLVGAAAIGFAVLEPFLRRRTRTWLRRWAGAMRAERVLEVQAAAVELQRTVRGFLGKRRADKRWRDIAXXXXXXXXXXXXXXXXGARRARLMEERRAVLTIEQKYREFVWQRDAVKLLALKRKERAATKLQAAWNGLVYGRRPVRRLREQRLREVSAVMLQRLWRGVVARGRADVLMEAKCRREAAVKIQAVARGCGARKVYRPIILRERAAATMSRFWRCAKARRVARQKRWENALAARLNPLVRGFLARSATKRLLEARARENRAMVVVCVAAQKIFRGKKGRLKARRELLRRCAAVELQRIVRGRAVRRLSRIEEGRPRSQAASWMAAMAVQRIWRGLKGRRKLGQRAAEHRLWNAAFTIQSAHRRQCMRRRRQERALKRGMEAANAAAAFSQGLGH-AVSVAGATAAXXXXXXXXXXGGRLSFADTTEEAGQRAAGDGAGEGARSIDRLEGAAGAASPRG-------AADTGSSATAAHGGT-AGGARVDDPPAVEVKVAPTPEYEDMGDVAIAAVLQSAKKSSTXXXXXXXXXXXXXX--XXXXXXXPVLVPAKPADPPPPVVEEEMLEYYEAKLRYLAAQEKAHGASAARIQAMFRAYEARQRAATLGAERDKAERRXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEILEASRREQGLLTIQCAVRCYLGKCRLQGLRKAEREKQEMLFRMAARIQALVRGIQTRGIWRKFFTSRALLQRERQRTGAQQIQSFWRSKLARTEAERRRSVRDAALLAEQLERHLKGLLEATMEAERRHAYAIRLQCWWRGILAVKVKARKQLTLMETPPEDVGEEKEKAAXXXXXXXXAIKARRFYNANYALLYRERERRKCCTECQSEYATRKCDTCTDKFCEGCWARIHSTGARRFHDWLPFAPATYDTSRPQDATAAPSITDSQYYYDTSTGQQGTGGGELWDVNQQSAELDPYYQPGYESYDYPGSEYYYDQRGWEQEGGNQQVSAVSVQG--------------WSPETNKQWYDPDQPPSTGSEYG-----YDGAMSYD-GAAAITPSSSSD-----YYPAWTPETPDTAADNNSNAAG--TTEKSWEGEGDGEWTSAAAEYYGYDSAGNGVDQAAGGAWAGAGG--------VAGGWDEG--WATPQPADTANGDE----DSSVFLASTGGETSKDSGGGXXXXXXAPPSGSSGSRPWSVNEYGQRVAGDWVEYWDDAAQAAYFYNTASGEAS 2195
BLAST of mRNA_H-paniculata_contig1429.2596.1 vs. uniprot
Match: A0A6H5KC93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC93_9PHAE) HSP 1 Score: 875 bits (2260), Expect = 2.100e-273 Identity = 874/2375 (36.80%), Postives = 1129/2375 (47.54%), Query Frame = 1
Query: 1 LAPELGLHGIPSRSLIEFEGGGNMLSHNILGEMLAANEPGILNERSAGARRTGSEWGKRSRCKEQGSMIARRWGRGTVVDDGPTEEGK-QVRLLSQADAIAWLRESERANLVEWPEVDTQDSTQRRDNSAAACVG------VADVAQQPAVQSTTI---GGTTCACSSSPTHGRRHSPTRARSRTRSPVKLYDHDNNPRVLRSLVDNTVETGLVG-GILKAEEHQRIDELKLQLELASHHAIELEDKIFQSQTGAPHRELLGELQLELQRTQNILQPEGRQPKITAVTRTAGYELTNGTQTNRSTKNREKCVERNKVTE-CLHPSGT--RSTPRSRHRNEQHNSSLKWARGGVTSTGKKSEINMLSSSFKC------RRGKNSNNPTLSSIPVFKSPSLPSPLPTPTSSLRRYLSSLRPFSADSARAAWGLGEPEEQFDGSPWDAASSLHD-TDASVNFHQRHLWPVLFVIGSTQRPMDRHPLAVCSLPLFDDELVFCLAKAIGESVEKVRTAIKILSQFDSSHFQAMMKNLCRTEDSASNDHSQNVDGRGEGVAAKRTLVGIPSEGQMGRNWVRDGSQISLEETTTSSKKVPYILRG---------RLDCVDEPVVISEAAASRVLTAGPLVGVFGDNTVKVILDVSRPWIVFDS-----GGTLDTEL------GFLTEKTKDLTKSMAKKVP---VHHPNEKKSSEKAVVIRGEKETGSRISDRD-ACDYPSRTFGIVRSPPDGADNGKGGTLIVARERTMGQDEDEVNCSDPA---ITSPAHADGSSC-------TAIVTQSKSGEEGVLVGQLVSAAAVRFRVYSVAVGLCYEGRRPSVSYSSSMRSFELESSRNIFIGGRGGSCRDWRRG-EFDGNRCRSMRSRPASANSDELGLPPLKLRKGDKRRFPRGLWRAGAGGSEESAAEPNVCLADGFGAERDENDFDWVRPRSTPRCLRPGFKGDVTSAMLRQELEACENNAARLSVSMVRKAEAWTKESQLSHSTATTAAAEAIQEATALELAGTR--AQDELIEAAKYRMRNIVDFMYLRLIRRSWSTWIEQTRRCRSLESAERLTRLVGAAALAHGVLEPFLRRRKRFWLRRWAAAMRAERVLEVQAAAVELQRITRGFVGRGRARGVRKYHAXXXXXXXXXXXXXXXXXARRERYLRECRAVKTIETKYREVVWHRNAQKLKKMRRRENAATRVKAVWRACVGGRRPXXXXXXXXXXXXXXXXXXXXXXGVIARVEADALLDAKVQREAATRIQAVARGRSARRSYYYAISRERAATRLSCFWRCASARAEKRRRHHRLRLALMVNSLVRGFLGRLGGHATREERRRKQQALLVGCVFAQKLFRGKQGQLKARRELQRKCAAVELQRIVRGHRVRRTSQLEEDKLRNQLVTWRVXXXXXXXXXXXXXXRNFGQWVADDVQRRAAFTIQSAYRRFVAHRCRRLRRLSLAARNNALNIAGHESVSNIDNDQAKRRSLHRGGKRGAATMAITDDGNLSNSTSRKRDWDNVNSDESSEGASQEGGHNEXXXXXXXXXXXXXXXHGDHGLDGEGIENPEVV---------YEDMGDVVLVEITSSHTEQTPVLPEAPEGVVLVAVPPRSVPESHGVVAVVVPS--AAPPAF---EATLEYYEAKRRYLAVQEAAHGASALQIQT--------------IFRAFAGRCKAAITRAHNCELAQIQACRGRAAVIVQARARGRAALKVAKEKRALLEKVERRKRGVITLQCAVRCFMAKSQLK------------------NLRAEEKARQDRVNRMAARI---QAQARGVQTREVWSKFFHSRALLERERQRQGAQKIQCTWRSRLARTEGERRKSVRDEALLAELLEKHLMTLLQPALEAERRHAYAVRLQCWWRGILAMKSKRRRGRELRETPISEVKHEEENAACVIQCHWRATKARHFYNDNYASLFRERERKKYCTECQGEYATRKCHTCLDKFCENCWTRIH-------------------GKGVRRFHHWEPFAIFPYNAAFLQQSGSA----DRQQHQVNGNANDWGTTATAGGELTAYTSNTQQQGSMESPAQYDYSYYGTDLTHYINYDYNNARAAVGTPPIAGDHFLQQEDPQQQFEATQ------DPDKSWCTEQPIVSTANDAGKHGGEYGGATAYDKGWEAVEQPYSSDGNNPYYYPQQDGSYSDPTTSDQMLADGSITTESSTAEGGQEGYDYEGATIFDQPNQTGGTSDTAGWEWTAPESHNSDDHSTLGTGTNNGPPWSVNEYDQKVNGEWMEYWDESAQAGYSSGTRTAGGTRGVNGETDTSMTGTSSGPSWSVNEYDQRFNGDWVEYWDESAQAGYFYNIVTGEAS 6717
L ELGLHG+P++SLIEFEGGG+MLS +LGEMLA ++ G+LN R ++ KR+R + QG+ AR G+G+ DG E + Q RLL QA+A L ES + + ++ + ST+R N+ A +A+Q + T G +++ H S R K YDHD+NP+VLRSLVD+T+ TG+ G G LKAEE +++++L+LQL LA H A ELED+IFQSQTG+PHRELLGELQL + N P +P + ++L T N K V E C P G RS R RHR S K R + + L+ S RR N ++ + P +SP L TPTSSLRRYLSSLRPFSA+SARAAWGL +P G+P A + D T N R WPVLFV+G ++ P RHPL+V +LPLFDDE+V LA+A GE EKVR +++LS+FD Q+ +K LC ++ R + VAA+ G GR+ R G + E S P L G V+EP+++SEAAA R LTAG L GVFG++ V+ I+ SRP +VFDS G L L G D ++ A + P + E+ SS + GE E + ++ D A PS + +G+ R G D C+D + SP ++ + + + + E+GVLV QLV AA RFRV+S+AV + S++ R F R I+IGG G DW G + G R R RPASA SDELGLPPLKL + DKR R R G E E +V F RPRSTPRCLRPG+KG+VT+AMLRQELEA E+ AARL ++M RKAEAW E+Q + A LA A + L+E+A+ RMR ++ MYL+ IRR W W E TRR RS+E+A R+ RLVGAAA+ VLEP LRRR R WLRRWA AMRAERVLEVQAAAVELQR RGF+G+ RA R+ AXXXXXXXXXXXXXXXXX R + E RAV+TIE KYRE VW R+A KL ++R+E AAT+++A W V GRRP GV+AR AD L++AK ++EAA +IQAVARGR AR+ Y I RERAA +S FWRCA AR R++ LA +N LVRGFL R EE QAL CA + LQRIVRG VRR S++EE + RNQ +W R GQ + +RR T++ R + +A + + G +VS A G + A T + ++ D+ S XXXXXXXXXXXXX HG + G ++ P + YEDMGDV + + S + + AP V V+VP+ A PP E L+YYEAK RYLA QE AHGASA +IQ +FRA+ R +AA RA ++ + K RR++G++T+Q F + + + ++R + +A RG+QTR VW KFF SR LL+RERQR GAQ+IQ WR HL LL+ +EAERRHAYA+RLQCWWRGILA+K R+ L ETP +V E+E AA V+Q HWRA KAR FYN NYA L+RERER+K CTECQ EYATRKC TC DKFCE CWTRIH G W PFA YN + Q + +A DRQ + G GGEL + A+ D Y Y +YDY+ G+ +QE QQ A + ++ W ST ++ G Y GA +YD G A+ SSD YYP D + A G+ T +S EG E + A + + G AG W + G N G W+ + NG+ D S + G + G +G+S WSVNEY QR GDWVEYWD++AQA YFYN +GEAS
Sbjct: 32 LVQELGLHGVPAKSLIEFEGGGSMLSREVLGEMLAVHDHGVLNARVGATEKSHGGRSKRARGR-QGASSARSPGKGS---DGRAVENRIQTRLLCQAEAPKCLGESSSSQSRVFAKLVPRKSTKRSHNNGVESRQRDYHDQQALLAEQRREKQTAFIDGDGMNHRRATATAHFEAQQTVAGSSNKRRRHKRYDHDHNPKVLRSLVDDTIITGIAGAGALKAEEGRQMEDLRLQLRLACHRATELEDQIFQSQTGSPHRELLGELQLA-RAAGNTGIPLLERPSWKKI----NFDLD-------PTGNAAKAPRNTDVLERCRSPDGAGGRSPLRPRHRV----SPRKTRRTPLDVSFSTDPPQHLAGSSTSATDIIPRRQANVSDMVTTCHPP-QSPPL-----TPTSSLRRYLSSLRPFSANSARAAWGLADPANG--GNP--LARPVTDFTHPFGNGQPR--WPVLFVMGGSKPPPPRHPLSVHALPLFDDEVVALLARAAGEPAEKVRAMVQLLSRFDVRLLQSAVKRLC----------CKHASSRTQAVAAR---------GGRGRHLQRSGPRGPATEAWGRSPMPP--LPGPSAAADAAHSSTSVEEPLLMSEAAAGRALTAGFLGGVFGEDAVRDIVVASRPVVVFDSTESAKGEALTPPLQGEAIGGERQNDRGDRSEGGASRAPSWKIGKNAEQDSSSRG----GEDEAAATAANEDLASSLPSVEYRRTWEDRNGSS---------VNPRAQG---DSPPCTDDGSLLVNSPRRVADTALGKRQLEVSELAEHNSNPEQGVLVAQLVRAATARFRVHSLAV----QHHEHGGVTSTNRRDF----GRGIYIGGSGAI--DWTEGGQEPGQRLR----RPASAGSDELGLPPLKLARKDKRTRRR---READAGRREEEVEFDV--------------FGVPRPRSTPRCLRPGYKGEVTAAMLRQELEASESTAARLGITMARKAEAWKTEAQEGIAAAAAXXXXXXXXXNRXXLAXXXXXAHEALLESAQDRMREAMNIMYLKTIRRGWDAWAELTRRQRSIEAAGRVARLVGAAAIGFAVLEPLLRRRTRTWLRRWAGAMRAERVLEVQAAAVELQRTVRGFLGKRRADKRRRDIAXXXXXXXXXXXXXXXXXXXXXRMMEERRAVRTIEQKYREFVWQRDAVKLLALKRKERAATKLQAAWSGLVYGRRPVRRLRERRLREVSAVMLQRLWRGVVARGRADVLMEAKCRQEAAVKIQAVARGRGARKVYCRIILRERAAATMSRFWRCAKARRVARQKRWESALAARLNPLVRGFLARRATKRLLEE-----QAL-------------------------DNCAMIVLQRIVRGRAVRRLSRMEEGRPRNQAASWMAATAVQRMWRGLKGRRMLGQRMR---RRRQERTLK--------------RGIEVANAAASFSQGGGHAVSVAGATAAIXXXXXXXXXGGRRSFADT-----TGEAGQRAAGDDAGDGARSIDRLXXXXXXXXXXXXXXXXXXXXAAHGGT-VGGPRVDGPPAIEVKVGATPEYEDMGDVAIAAVLQSAGKSS-----APPSXXXXXXXXXXXXXXAVVEPVLVPAKPADPPXXVVEEEMLQYYEAKLRYLAAQEKAHGASAARIQASATVDTVVERDQEAMFRAYEARQRAATLRAERDKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEILKAARREQGLLTIQAPKSGFEEDGEGEAGDVVSHGGPSTGGWAGLSCTPPSLPSPSCLDRRVFGVCFGKALVRGIQTRNVWRKFFTSRVLLQRERQRTGAQQIQSFWR--------------------------HLKGLLEATMEAERRHAYAIRLQCWWRGILAVKVMARKQLTLIETPPEDVGEEKEKAALVLQXHWRAIKARRFYNANYALLYRERERRKCCTECQSEYATRKCDTCTDKFCEGCWTRIHSTLSSVCKEVSTKCRSPLAGCSAPFMXDWLPFAPAAYNTSRPQDAAAAPSTTDRQYYYDAST----GQQGAGGGELWDVN---------QQSAELDLYY----QPGYDSYDYS------GSKYYYDQRGWEQEGGNQQTSAVSVQGWSPETNQQWYYPDQPPSTGSEYG-----YDGAMSYD-GAAAITPSLSSD-----YYPAWTPETPDTAADNNSNAAGT-TVKSWEGEGDGE-WTSAAAEYYGYDSAGSGVDQAAGGAWAG--------GGGVAGGWNEG--WATPQPADTANGDE----DSSVFLASTGGETSKDSGGGXXXXXXAPPSGSSGSRPWSVNEYGQRVAGDWVEYWDDAAQAAYFYNTASGEAS 2172
BLAST of mRNA_H-paniculata_contig1429.2596.1 vs. uniprot
Match: A0A835Z2L4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2L4_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.950e-9 Identity = 66/192 (34.38%), Postives = 90/192 (46.88%), Query Frame = 1
Query: 2665 DENDFDWVRPRSTPRCLRPGFKGDVTSAMLRQELEACENNAARLSVSMVRKAEAWTKESQLSHSTATTAAAEAIQEATALELAGTRAQDELIEAAKYRMRNIVDFMYLRLIRRSWSTWIEQTRRCRSLESAERLTRLVGAAALAHGVLEPFLRRRKRFWLRRWAAAMRAERVLEVQAAAVELQRITRGFVGR 3240
DE+ W RPRSTPR LR GFKG ++ A LR EL+ + A + RK W+K+ LS A++ A+ LI R+ + + R + R+ + W T +A +R GAAALA VL P RRR R L+ R+LEV AA +E QR+ RGF+ R
Sbjct: 428 DESTGAWPRPRSTPRVLRTGFKGHLSIAELRAELQQAQRAAHDNEAAARRKVGVWSKD--LSQRRXXXXXXXXXXXXXAVD-----ARRALIGRGLERLTALAETAEARHVARACARWRAHTMYLALRPTARAFSRAAGAAALAWCVLAPLHRRRLRRALQCXXXXXXXXRLLEVTAATIEAQRVVRGFLAR 612 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1429.2596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1429.2596.1 >prot_H-paniculata_contig1429.2596.1 ID=prot_H-paniculata_contig1429.2596.1|Name=mRNA_H-paniculata_contig1429.2596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2247bp LAPELGLHGIPSRSLIEFEGGGNMLSHNILGEMLAANEPGILNERSAGARback to top mRNA from alignment at H-paniculata_contig1429:13345..25593- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1429.2596.1 ID=mRNA_H-paniculata_contig1429.2596.1|Name=mRNA_H-paniculata_contig1429.2596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12249bp|location=Sequence derived from alignment at H-paniculata_contig1429:13345..25593- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1429:13345..25593- >mRNA_H-paniculata_contig1429.2596.1 ID=mRNA_H-paniculata_contig1429.2596.1|Name=mRNA_H-paniculata_contig1429.2596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=13482bp|location=Sequence derived from alignment at H-paniculata_contig1429:13345..25593- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |