mRNA_H-paniculata_contig1426.2582.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1426.2582.1 vs. uniprot
Match: A0A6H5JFJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ2_9PHAE) HSP 1 Score: 919 bits (2376), Expect = 3.660e-301 Identity = 680/1722 (39.49%), Postives = 920/1722 (53.43%), Query Frame = 1
Query: 109 ESCTGDASIQQRDDRRARLLSRSCARRVFLNAWEREGRAKWSSNQAAICRYERRLLSYELAVKARASARQRMSRTWHANDAAGGIRWLEKNLDRLGLDVGGDS--GGNLSIAAGDILFSDKDTQAMFRSKLLHTVLDQKFVPGSNAEAMAELHFRGNAGRHARREREHRRLKTEVDRRHAKAETDAQRAANEHLESMLVAGREKRLAAAAHWERRQVREQQAMQDTKSSEKMKAAKQDAFEKAFNRFSICAREEYAARKAKREAVVQVLKTKQQLHRDNKQQRTQLLCMDSALKLVDLAVVASETRADRGGGPLPPTLWMALKLRFCSPIPFFEEKIVPESATEGRNPALEANALLQRRNLDRCDGQWRPQGLVRAAFEQEITPLNAALSVARYLTEAAGTGPRESPATYCSDRIADNSDKTEVWNLSVKLVLLG---GTTSLHSELRRWTGLYCCDLETALECAMDLGAKMAAVDTKNTGGKKKRKSSAVAESLELATEEAGTRHQTV------------VAHMSFDLQAREEDVATFKEAAASYYALRTHPKKAAVPVPLATLTDVLVKHLACHSAPGRRGWILIGYPRSPLEAKMLENSLTGYMDDDVARELGVGGKGSASDAKKKKMSVVPGKTIA-PXXXXTSGLDVVLHISTAPSKKASQG---RSAEFEAKEEIGSEVMNGSLDDAAERFSAKHPAGTETNEQKEEDRFPPETRALVEWWSTFKDGQLACEVPHEVSNERLLETLFLLVILAQKRKEDHIGWME----ANKHSEAILAEGDNVGDAGCDVVSGSGPISTNTSTLGDQSLSSSVHRVSPLASSLMSSLKEMRDGRRGRMSHAMRIRVESLTGERHLDLEGVRAAIKLEAQSNGPAVKKDLVGTKVALCATEALQKLEGECAASSVVDWMAAADYSFACGLRAPEKRWTVACLRLEGDIADFIARR-DETAAVDARARATSRTTTTIHSYGVSSERSHIDAPPTESDSVWESIEAFEQEAGDIVDERHTTVEGVCHMMDAEAQELVSAWARGVSVAAADLCAAERRSHLEVVRTLCSLHTLFGLEVEPG--AADLQTTRMAARFVADGLASELSNAAASSPHLLGKDGGLDLNEEVRLACEQATAT--TNNPICDVADGGIAGKRKGNRGEETTSMGDVASVGEVHVEECDVKVGSRLGRRCDRVEGDTVPF---IKTGIETHDCGVEQGAARHKPIDGE-----EDALATAVWKTRYSYICRVWGVVVRLAKAVKRSELLTSSTVSRMKFMKRRRVQLEHEAVGVAAAAVKRALTDCDDDAIRDILEQGIPLWVEDDETFAADPGVALSWGMNTLGLSHVASLAISLRQAFGAVTSTSGSSGDACTMVPATPELANVVKAWAEKLTVRAQRGPREEIPSVWIKVDNVDGYIRALCRAVGSTGFTKT-------FQWRKLVHCLLLGHICALPTLAELRAMRLSFEHKQISPDMSSQSNGFLQMSGSAVIPGGTRVSASEPE-PTLSLIIAESQFVSDTLVWFEEALMIGTGEDRVEDGRRGCGDSSGVSSTIKAIYSKAWADDEGRLDALDLLLTLCSVPVEREDSVFGVGAEDADRGDGGIPFSLGLFQAFSLLADSRSAS----TAKAQTSRGQRVAATYST---TPVTSYIAPKNTSADPLG----LPEPDGNPHVTLPQLCAILRHGG-IPAKDVPGIFEIAWNMDETERQR 5100
ES G SI++RD+RR R L RS RR FL WEREGRAKW+SNQA++CRYERRLL+YELAVKA +AR+R+SR H+ND A GIRW E NLDRLGLD GG S GG + A L DK+T A FRS+L+ VLDQ FVP SNAEAMAEL FRG GR R+ERE RR+KTEVD+R A AETDA R A + L+ ML G E+R AAAA+W R EQ+A+ D + +M AA+++AFE AFN + C R+ Y R+A+REA + L+ + Q R K++RT+ +C + K+ DLAVV+SE RA RGG PLPPT W LK RFCSP PFF + PE E R+P L+A A L+R NLDRC+G WR + V A +PL A +AR L EA+G+ PRE+P + R D + + +V +LVLL G L +EL RW GLY C +ETALECAM++GA+ AA K G K RK S + + E++G V A F A EED A FK AA +Y+ALRTHPKK PVPLAT TD+LVKHL+C AP RGWIL+GYP + LE+K+LEN+L+GY D++VA ELG GK S SDAK KKMS+ P + P SGLD VL ++ G + + K + +N ++ A+ A G + E E ++ E RA + W F+ G L+C+VP+EV+NERLLETLFLLV +AQ RK++H W + + ++ E + + + G G + T + + + R SPLA L +S++ +R RRG MS + RI++E+L G+R LDLEG+R+A+ S + D G+ + T AL+KLE E A SV+DW + A++SF+ LR P+ RWT ACLRLE IAD++ RR D AV R R T S G S + + PP E D VWE++EAF+ E GD+VD+RH++ E + +D EA V AW V+ AA DLCAAER ++LE V LC LFGLE +P ++ T R A AD L E++ + G L EVR A EQ T +P + + + G + + + + VEE S G+ D + P + + +CG + IDG +AL +W+ R +YICR+ GVVVRL +AV+ E S ++ +KRRRVQLEHE + VA A V+RAL +CD + D+LE GIP G +G S S L+Q + L +R R + V R G+ G T + +L+HCLLLGHI +LPTL +L ++R + K + +S S G GSA V +S + PTL IA+ FV L WFE+ +D + G R D+ + IK +YS+AW D+GR+D +DLLLTLC+VP + ++ D G+ FS GLF+AF +LA++ S+ T A ++R A T ++ P +S +N +A G L P V+LP L AIL HG + DV + E+ ++ R +
Sbjct: 3 ESDEGQQSIRRRDERRLRWLLRSTVRREFLQNWEREGRAKWNSNQASLCRYERRLLNYELAVKATTAARKRISRNRHSNDEADGIRWFEHNLDRLGLDPGGGSVDGGGRAGA----LLPDKETPATFRSRLVRAVLDQNFVPSSNAEAMAELRFRGVTGRRGRKEREDRRVKTEVDQRRATAETDANRRAEKRLKEMLDKGHERREAAAAYWAERHNLEQKAITDKRRFAEMAAAQEEAFETAFNARADCTRQSYEERRAEREANNEALRIRLQHERYEKRRRTETMCAEIVHKMSDLAVVSSELRASRGGAPLPPTAWAHLKRRFCSPEPFFVDSTPPEPTPEPRDPVLDAKAFLERNNLDRCEGLWRLREDVPAELFGAPSPLAKASGIARSLVEASGSIPREAPTYGRNSRCHDKATRPDV-----RLVLLSRRNGLVDLAAELGRWVGLYVCSMETALECAMEVGAEAAASSGK---GGKSRKGSISGRNSSVGDEDSGENASGVDAETAAEKAREATARRCFHPDATEEDTAAFKAAALAYHALRTHPKKGTAPVPLATTTDLLVKHLSCR-APSGRGWILVGYPTTLLESKLLENALSGYTDEEVAAELGTAGKASKSDAKAKKMSLAPQQQEEQPRVLPRSGLDAVLSLAEPCLSSPRVGTLPQDSPAGTKGGADANALNENMAAASTTEEADGNGGGQDEENVERSKYFAERRAQIAWLQGFEGGHLSCDVPNEVNNERLLETLFLLVNIAQNRKDEHEFWQKEPALSRRNPEVVATQ----------ALEGGGSSEPPSDTKSHSTTAMATDRPSPLAVPLSASVERLRRERRGNMSQSTRIQLEALMGDRELDLEGLRSAV-----SQASVLAADTTGSACSPQQT-ALRKLEAESPALSVIDWASTAEFSFSKELRNPDDRWTTACLRLEAQIADWLTRRRDALEAVQNRRSRGDRATR--DSRGDQSIIASV--PPAEGDCVWEALEAFQLETGDVVDDRHSSAEIIVGQIDGEADRKVRAWIGDVASAATDLCAAERATYLETVEALCVFDRLFGLEEDPNDITSNADTLREATYAAADALVEEVAKTRRRFAAV-----GTCLEGEVRRAVEQVYQRIGTTSPAHGPSQEPVTLRDAGCKTRQANPLPEAIE----RVEE----FSSSAGQSSDWTRAISTPTKGEAASSVTFEECGENR-------IDGRGENRASEALEAVIWRCRQTYICRLRGVVVRLLRAVEGCEAKVLSMRLALRRLKRRRVQLEHEGISVATATVRRALQECDHVILADMLENGIP-------------------GRAKVGYS---SSVDQLKQ-----------------------------RVCRHALQCDRRRHGRRVMEKV-----------RETSSEYGAPGLTTASAMPFLVHETTRLIHCLLLGHIRSLPTLDDLSSIRNALCLK--ASTVSQTSVGI----GSAADTASPDVHSSTAQMPTLR--IAQRHFVGLPL-WFEQQR-----DDVNQGGERADRDALLL---IKKVYSQAWGGDDGRVDGMDLLLTLCAVPNAGAGGDVSLEEDEEGVWDTGVSFSAGLFRAFFMLAETSSSGPHNDTLVANSNREVASAGTVASRVAAPPSSAGNMQNAAAGSTGNMSSLRRDGVFPRVSLPHLRAILGHGSRMTPADVSSVCELVAKKEQARRHQ 1592
BLAST of mRNA_H-paniculata_contig1426.2582.1 vs. uniprot
Match: D8LCB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB3_ECTSI) HSP 1 Score: 851 bits (2199), Expect = 1.060e-275 Identity = 584/1326 (44.04%), Postives = 767/1326 (57.84%), Query Frame = 1
Query: 1 MTRAAADTNIRELMLAVQQQKFEDREKAAQRKASYTESCTGDASIQQRDDRRARLLSRSCARRVFLNAWEREGRAKWSSNQAAICRYERRLLSYELAVKARASARQRMSRTWHANDAAGGIRWLEKNLDRLGLDVGG---DSGGNLSIAAGDILFSDKDTQAMFRSKLLHTVLDQKFVPGSNAEAMAELHFRGNAGRHARREREHRRLKTEVDRRHAKAETDAQRAANEHLESMLVAGREKRLAAAAHWERRQVREQQAMQDTKSSEKMKAAKQDAFEKAFNRFSICAREEYAARKAKREAVVQVLKTKQQLHRDNKQQRTQLLCMDSALKLVDLAVVASETRADRGGGPLPPTLWMALKLRFCSPIPFFEEKIVPESATEGRNPALEANALLQRRNLDRCDGQWRPQGLVRAAFEQEITPLNAALSVARYLTEAAGTGPRESPATYCSDRIADNSDKTEVWNLSVKLVLLG---GTTSLHSELRRWTGLYCCDLETALECAMDLGAKMAAVDTKNTGGKKK------RKSSAVAES---------LELATEEAGTRHQTVVAHMSFDLQAREEDVATFKEAAASYYALRTHPKKAAVPVPLATLTDVLVKHLACHSAPGRRGWILIGYPRSPLEAKMLENSLTGYMDDDVARELGVGGKGSASDAKKKKMSV-VPGKTIAPXXXXTSGLDVVLHISTAPSKKASQGRSAEFEAKEEIGSEVMNGSLDDAAERFS---AKHPAGTETNEQKEEDRFPPETRALVEWWSTFKDGQLACEVPHEVSNERLLETLFLLVILAQKRKEDHIGWMEANKHSEAILAEGDNVGDAGCDVVSGSGPISTNTSTLGDQSLSSSVHRVSPLASSLMSSLKEMRDGRRGRMSHAMRIRVESLTGERHLDLEGVRAAIKLEAQSNGPAVKKDLVGTKVALCATE--ALQKLEGECAASSVVDWMAAADYSFACGLRAPEKRWTVACLRLEGDIADFIARRDETAAVDARARATSRTTTTIHSYGVSSERSHIDAPPTESDSVWESIEAFEQEAGDIVDERHTTVEGVCHMMDAEAQELVSAWARGVSVAAADLCAAERRSHLEVVRTLCSLHTLFGLEVEPG--AADLQTTRMAARFVADGLASELSNAAASSPHLLGKDGGLDLNEEVRLACEQATAT--TNNPICDVADGGIAGKRKGNRGEETTSMGDVASVGEVHVEECDVKVGSRLGRRCDRVEGDTVPF---IKTGIETHDCGVEQGAARHKPIDGEEDALATAVWKTRYSYICRVWGVVVRLAKAVKRSELLTSSTVSRMKFMKRRRVQLEHEAVGVAAA 3876
MTRAAA N++ELML VQQQK+EDR+KAAQR+ S ES G SI++RD+RR+R L RS RR FL WEREGRAKW+SNQA++CRYERRLL+YELAVKA +AR+R+SR H+ND A GIRW E NLDRLGLD GG D GG L DK+T A FRS+L+ VLDQ FVP SNAEAMAEL FRG GR R+ERE RR+KTEVD+R A AETDA+R A +HL+ ML GRE++ AAAA W R+ E++A+ D + +M AA++DAFE AFN + C R+ Y R A+R A + L+ + Q R K++R + +C + K+ DLAVV+SE RA RGG PLPPT W LK RFCSP PFF + PE E R+P L+A A L+ +NLDRC+G WR + V A +PL AL VAR L EA+G+ PRE+P + R D+ + V+LVLL G L +EL +W G+Y C +ETALECAM++GA+ AA D K GGK + RKSS E+ E A EEA + A F A +ED A FK AA +Y+ALRTHPKKA+ PVPLAT TD+LVKHL+C AP RGWIL+GYP + LE+K+LEN+L+ Y DD+VA ELG GK S SDAK KKMS+ + + P SGLD VL ++ G + G N +D A + A G + E E + E RA + W F+ G L+C+VP+E +NERLLETLFLLV +AQ RK++H W + E L+ ++ +A + G G + T +++ R SPLA L +S++ +R RRG MS + RI++E+L G+R LDLEGVR+A+ S + D T C+ + AL+KLE E A SV+DW + A++SF+ LR P+ RW ACLRLE +A ++ARR + A++A + PP E D VWE++EAF+ EAGD+VD+RH++ E + +D EA V AW V+ AA DLCAAER ++LE V TLC LFGLE +P + QT R A AD L E++ A + G L EV A EQ T +P + + N G ET + E VEE S G+ D + P +T + +CG + + +AL A+W+ R +YICR+ GVV+RL +AV E S ++ +KRRRVQLEHE + A A
Sbjct: 1 MTRAAA-VNVKELMLTVQQQKYEDRDKAAQREISMKESDEGQQSIRRRDERRSRWLLRSTVRREFLQNWEREGRAKWNSNQASLCRYERRLLNYELAVKATTAARKRISRNRHSNDEADGIRWFEHNLDRLGLDPGGGSVDGGGGAGA-----LSPDKETPASFRSRLVRAVLDQNFVPSSNAEAMAELRFRGVTGRRGRKEREDRRVKTEVDQRRATAETDAKRRAEKHLKEMLDKGRERQEAAAACWGERRNLERKAIADKRRFAEMAAAQEDAFETAFNARADCTRQSYEERSAERMANNEALRIRVQQTRTEKRRRAETMCAEIVHKMSDLAVVSSELRASRGGVPLPPTAWAHLKRRFCSPEPFFVDSTPPEPTPEPRDPVLDAKAFLESQNLDRCEGLWRLREDVPAELFGAPSPLAKALGVARGLVEASGSTPREAPNYGRNSRSGDD----KATRPDVRLVLLSRRDGLFDLAAELGQWVGVYVCSMETALECAMEVGAEAAASDDK--GGKSRKGSISGRKSSVGGENSGENAPGVDAETAAEEA----EKATARRCFHPDATDEDTAAFKAAAMAYHALRTHPKKASAPVPLATTTDLLVKHLSCR-APSGRGWILVGYPTTLLESKLLENALSSYTDDEVAAELGTAGKASKSDAKTKKMSLALQQQEEPPRALPRSGLDAVLSLAEPCLSSPRVGALPQDSVAGIQGDAEANAPNEDLAAASTTDEADGNGGGQDEEDVERSKCLAERRAQIAWLQGFEGGHLSCDVPNEANNERLLETLFLLVNIAQNRKDEHEFWQK-----EPALSRRNSEVEA-TQALEGGGSSEPPSDTKSHSTIAMVTDRPSPLAVPLSASVERLRRERRGNMSQSTRIQLEALMGDRELDLEGVRSAV-----SQASVLAAD---TTEGACSPQQTALRKLEAESPAPSVIDWASTAEFSFSKELRNPDDRWATACLRLEAQMAGWLARRRD--ALEAMXXXXXXXXXXXXXXXXDQSIT-ASVPPAEGDCVWEALEAFQLEAGDVVDDRHSSAETIVGQIDGEADRKVRAWIGDVASAATDLCAAERATYLETVDTLCVFDRLFGLEEDPNDNTSSAQTIREATYAAADALVEEVTKARRRFAAV-----GSCLEGEVSRALEQVYQRIGTTSPAHGPSQEPVTLL---NAGCETRQENPLPQAIE-GVEE----FSSSAGQSSDWTATNDTPTKRKAETSVTIEECGESRAS----------EALKAAIWRCRQTYICRLRGVVMRLLRAVGDCEAKVLSMRLALRRLKRRRVQLEHEGISAATA 1269
BLAST of mRNA_H-paniculata_contig1426.2582.1 vs. uniprot
Match: A0A836CPH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPH3_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 2.250e-8 Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 1
Query: 1672 FKEAAASYYALRTHPKKAAVPVPLATLTDVLVKHLACHSAP-------GRRGWILIGYPRSPLEAKMLENSLTGYMDDDVAREL 1902
F+EAA +Y+ KK P P L D+L+ H+AC A G GW+L+GYP + LEAK+LE+ L+GY DDDV L
Sbjct: 950 FREAALAYHKFTAESKKGPAPAPPLVLLDLLLLHVACAIAQQRGEGRGGEGGWVLVGYPTTLLEAKLLEHRLSGYSDDDVLTAL 1033 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1426.2582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1426.2582.1 >prot_H-paniculata_contig1426.2582.1 ID=prot_H-paniculata_contig1426.2582.1|Name=mRNA_H-paniculata_contig1426.2582.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1700bp MTRAAADTNIRELMLAVQQQKFEDREKAAQRKASYTESCTGDASIQQRDDback to top mRNA from alignment at H-paniculata_contig1426:7670..14841- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1426.2582.1 ID=mRNA_H-paniculata_contig1426.2582.1|Name=mRNA_H-paniculata_contig1426.2582.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7172bp|location=Sequence derived from alignment at H-paniculata_contig1426:7670..14841- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1426:7670..14841- >mRNA_H-paniculata_contig1426.2582.1 ID=mRNA_H-paniculata_contig1426.2582.1|Name=mRNA_H-paniculata_contig1426.2582.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=10200bp|location=Sequence derived from alignment at H-paniculata_contig1426:7670..14841- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |