mRNA_H-paniculata_contig14252.2579.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14252.2579.1
Unique NamemRNA_H-paniculata_contig14252.2579.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig14252.2579.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 1.190e-138
Identity = 230/352 (65.34%), Postives = 262/352 (74.43%), Query Frame = 1 
Query:  163 QKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSG--TCFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPA-TAKESSSKKSAIDFSADGDESDEGFMYATTHNGKEVKVNTAGAT------------------------------------------LLVDTGATETMLDDRLIPGLKEIMQEYKQLVKPKAIT 1083
            QKHEDD++ISGDGQAAF+ELNLNYNKVTDEVIRATMEEL+NTPMEP QNPDDYFNQKHLLRHK +KMGETISD YF D CVTGFT+EYKDVKMIMYRDPDFNVD+MQTTMRHMFLDEQSR G KG IAGRGFAM  TTS   TCF+CGE GHI RNC  KRGKG+ ++TKPAGAAKWCSVHFTT+HSDEEC+EQGA RP+KS++TGKA SAC       S S K   A T +E+SS ++ IDFSA+G ES+EGFMYA  H G+++K    GAT                                          LL+DTGA+E MLDD LIPGLKEIM+E+K+L KPK ++
Sbjct:   81 QKHEDDSKISGDGQAAFQELNLNYNKVTDEVIRATMEELINTPMEPRQNPDDYFNQKHLLRHKAEKMGETISDCYFNDECVTGFTNEYKDVKMIMYRDPDFNVDKMQTTMRHMFLDEQSRNGPKGSIAGRGFAMTATTSEEPTCFDCGEKGHIWRNCSEKRGKGK-KKTKPAGAAKWCSVHFTTRHSDEECFEQGATRPKKSSNTGKALSACASCTHCFSTSNKTELAMTKQEASSTQAEIDFSAEG-ESEEGFMYAIVHKGEDLKPMATGATPLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLIDTGASENMLDDCLIPGLKEIMREHKELAKPKVVS 430
[Close]
BLAST of mRNA_H-paniculata_contig14252.2579.1 vs. uniprot
Match: D7G6Q1_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q1_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 1.910e-122
Identity = 190/260 (73.08%), Postives = 208/260 (80.00%), Query Frame = 1 
Query:  268 MEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSG--TCFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSN-DTGKAFSACTHXXXXSSASYKKGPATAKESSSKKSAIDFSADGDESDEGFMYATTHNGKEVKVNTAGATLLVDTGATETMLDDRLIPGLKE 1038
            ME+L NT MEPGQNPDDYFN KHLLRHKV+KMGE ISDRYFKD+CVTGFT EYK+VKMIM+RDP+FNV+ MQTTM HM LDEQSRKGSKGGIAGRGF M TT S   TCF CGE GHIRRNC ++RGKGR ++TKPAGA KWC  HFTTK+SDEECY QGAKRP      T KAFSAC H    SS S +K   TAKE+SS K+AID S DGDESDEGFMYATT  G EV+ N  G TLLV+ GATETM DDRLIP LK+
Sbjct:    1 MEKLDNTSMEPGQNPDDYFNHKHLLRHKVEKMGEKISDRYFKDMCVTGFTHEYKNVKMIMHRDPNFNVNHMQTTMHHMALDEQSRKGSKGGIAGRGFPMVTTASEQETCFGCGEKGHIRRNCLQRRGKGRQRKTKPAGATKWCCFHFTTKNSDEECYGQGAKRPITDQISTDKAFSACAHCAHFSSTSDRKELTTAKEASSTKAAIDSSTDGDESDEGFMYATTRTGMEVEANAEGVTLLVEIGATETMRDDRLIPHLKD 260
[Close]
BLAST of mRNA_H-paniculata_contig14252.2579.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 9.050e-106
Identity = 181/299 (60.54%), Postives = 221/299 (73.91%), Query Frame = 1 
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPAT---AKESSSKKSAIDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   + K   T    +   ++K+ IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM DDRLIP 
Sbjct:  102 KHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDTHAKPTTTETPTETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIPN 397
[Close]
BLAST of mRNA_H-paniculata_contig14252.2579.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 333 bits (855), Expect = 1.880e-105
Identity = 181/309 (58.58%), Postives = 225/309 (72.82%), Query Frame = 1 
Query:  163 QKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPATAKESSSKKSAIDFSADGDESDEGFMYATTH--NGKEVKVNTAGATLLVDTGATETMLDDRLIPGLKEIMQEYKQLVKPKAI 1080
            QKHEDD  ISGDGQAAF EL  NY++VTDEVIRA MEEL N PM PG+NPDDYFNQKHLLR ++ KMGE ISDR FKDICV GF+DEYKDVK++++RDP FNV  M +TMR++FLDEQSRKG KG IAGRGFAMATT S   C  C E GHIRRNCP+ + + + ++TKPAGA KWCS H TT HSDEECY+QG KRPE + D+ K F+AC++    SSAS K       +S+++ + +DF+ D D  D GFM+AT    +G+    ++ G  L+VD+ A+ETM D+RLIP     + +Y Q   PK +
Sbjct:  121 QKHEDDTGISGDGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAK-KKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSNKVFTACSNCTHCSSASKKD------DSNNEVAVVDFTRDEDAFDSGFMFATCSRISGRNFAASSTGVRLVVDSEASETMFDNRLIPDGN--LHDYTQRNSPKIV 420
[Close]
BLAST of mRNA_H-paniculata_contig14252.2579.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 3.610e-105
Identity = 181/299 (60.54%), Postives = 221/299 (73.91%), Query Frame = 1 
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSASYKKGPATAKESSSK------KSAIDFSADGDESDEGFMY---ATTHNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTHXXXX + S        K  + K      K+ +DFS D D    GFMY    +  +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:  102 KHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHXXXXXTQSRDTHAKPTKRETPKETEKTEKAEVDFSYDEDTFKGGFMYHAICSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 397
[Close]
BLAST of mRNA_H-paniculata_contig14252.2579.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 1.410e-102
Identity = 183/299 (61.20%), Postives = 221/299 (73.91%), Query Frame = 1 
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS--YKKGPATA---KESSSKKSA-IDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   +  P T    KE+   + A IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM DDRLIP 
Sbjct:  102 KHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDDRLIPN 397
[Close]
BLAST of mRNA_H-paniculata_contig14252.2579.1 vs. uniprot
Match: A0A6H5JC59_9PHAE (gag_pre-integrs domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC59_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 4.650e-102
Identity = 185/299 (61.87%), Postives = 225/299 (75.25%), Query Frame = 1 
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGTC-FECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPATA--KE-SSSKKSAIDFSADGDESDEGFMYATTHN---GKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG   FEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTHXXXXS+ S   + K   T   KE   ++K+ IDFS D D    GFMY  T +   G+       G + LVD+GA+ETM D+RLIP 
Sbjct:  102 KHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPIYFECNEQGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHXXXXSTQSRDTHSKPTTTETPKEIEKTEKAEIDFSYDEDAFKGGFMYHATCSKAGGRTFTTTATGTSALVDSGASETMFDNRLIPN 397
[Close]
BLAST of mRNA_H-paniculata_contig14252.2579.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 8.200e-102
Identity = 182/299 (60.87%), Postives = 221/299 (73.91%), Query Frame = 1 
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS--YKKGPATA---KESSSKKSA-IDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   +  P T    KE+   + A IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:  102 KHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEQAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 397
[Close]
BLAST of mRNA_H-paniculata_contig14252.2579.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 1.640e-100
Identity = 179/299 (59.87%), Postives = 221/299 (73.91%), Query Frame = 1 
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS---YKKGPATA--KESS-SKKSAIDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  + GDGQAAF EL  NYN++TDE IRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   + K   T   KE+  ++K+ IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:  121 KHEDDTGLCGDGQAAFAELKANYNRLTDEAIRAELDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIHAKPTTTEIPKETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 416
[Close]
BLAST of mRNA_H-paniculata_contig14252.2579.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 2.540e-100
Identity = 182/299 (60.87%), Postives = 223/299 (74.58%), Query Frame = 1 
Query:  166 KHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEPGQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMYRDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGT-CFECGENGHIRRNCPRKRGKG-RMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKRPEKSNDTGKAFSACTHXXXXSSAS--YKKGPATA---KESS-SKKSAIDFSADGDESDEGFMYATT---HNGKEVKVNTAGATLLVDTGATETMLDDRLIPG 1029
            KHEDD  +SGDGQAAF EL  NYN+VTDEVIRA +++L  T MEPG+NPDD+FN+KH LR +++KMGETISDR FKDICV GF+++YKD+KM+++RDP F+V QMQ TMR++FLDEQ RK +KG IAGRGFAMAT TSG  CFEC E GH+RRNCP ++ +G R ++TKPAGA KWCSVH TT HSDEECY QGAKRPE+   TGKAFSACTH    S+ S   +  P T    KE+  ++K+ IDFS D D    GFMY  T    +G+       G + LVD+GA+ETM D+RLIP 
Sbjct:  102 KHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPER---TGKAFSACTHCVHCSTQSRDIQAKPTTTEIPKETEKTEKAEIDFSYDEDAFKGGFMYHATCSKGSGRTFTTTATGTSALVDSGASETMFDNRLIPN 397
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14252.2579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW66_9PHAE1.190e-13865.34CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6Q1_ECTSI1.910e-12273.08CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJB9_9PHAE9.050e-10660.54Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5L580_9PHAE1.880e-10558.58CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KN28_9PHAE3.610e-10560.54Uncharacterized protein (Fragment) n=3 Tax=Ectocar... [more]
A0A6H5K3T5_9PHAE1.410e-10261.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC59_9PHAE4.650e-10261.87gag_pre-integrs domain-containing protein (Fragmen... [more]
A0A6H5L1Z9_9PHAE8.200e-10260.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUN9_9PHAE1.640e-10059.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHG5_9PHAE2.540e-10060.87Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14252contigH-paniculata_contig14252:569..2465 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1085
Cds size1083
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929134.851844-CDS-H-paniculata_contig14252:568..7331622929134.851844-CDS-H-paniculata_contig14252:568..733Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14252 569..733 +
1691480744.5400772-CDS-H-paniculata_contig14252:568..7331691480744.5400772-CDS-H-paniculata_contig14252:568..733Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14252 569..733 +
1622929134.8676422-CDS-H-paniculata_contig14252:1545..24631622929134.8676422-CDS-H-paniculata_contig14252:1545..2463Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14252 1546..2463 +
1691480744.5488865-CDS-H-paniculata_contig14252:1545..24631691480744.5488865-CDS-H-paniculata_contig14252:1545..2463Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14252 1546..2463 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14252.2579.1prot_H-paniculata_contig14252.2579.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14252 569..2463 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14252.2579.1

>prot_H-paniculata_contig14252.2579.1 ID=prot_H-paniculata_contig14252.2579.1|Name=mRNA_H-paniculata_contig14252.2579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=361bp
VDKTTSLATGPSRYTRLLCFRQQRRFRTDGSSFGSEINKKIRGRARTDEL
DSGRQKHEDDNEISGDGQAAFRELNLNYNKVTDEVIRATMEELVNTPMEP
GQNPDDYFNQKHLLRHKVQKMGETISDRYFKDICVTGFTDEYKDVKMIMY
RDPDFNVDQMQTTMRHMFLDEQSRKGSKGGIAGRGFAMATTTSGTCFECG
ENGHIRRNCPRKRGKGRMQRTKPAGAAKWCSVHFTTKHSDEECYEQGAKR
PEKSNDTGKAFSACTHCTHCSSASYKKGPATAKESSSKKSAIDFSADGDE
SDEGFMYATTHNGKEVKVNTAGATLLVDTGATETMLDDRLIPGLKEIMQE
YKQLVKPKAIT
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mRNA from alignment at H-paniculata_contig14252:569..2465+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14252.2579.1 ID=mRNA_H-paniculata_contig14252.2579.1|Name=mRNA_H-paniculata_contig14252.2579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1897bp|location=Sequence derived from alignment at H-paniculata_contig14252:569..2465+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGGACAAGACGACGAGTTTAGCAACCGGGCCTTCCAGGTACACCAGACT
TTTGTGCTTCCGACAGCAGCGAAGGTTCAGGACGGACGGTTCAAGTTTCG
GGTCGGAGATCAACAAGAAGATACGGGGTCGAGCCAGGACAGACGAGCTC
GACTCAGGAAGACAAGTAAGAGGAATACGGTCTCACGCACACACACAGGG
CCTTCACAACACACACCTAATCTGGTAGTGGGAGGAGCTCCTTTAGTGCT
GTAGTAACCAACACTTCCCTTGGAGAGAAAGGCTCGCAAATCGAGCAAAG
GACTGCTGTATCGACAGCAGGGACGGTCCACACCGCAGTCCTATACACCC
ATCCGCGAGGAGAGGGTAACAGGAGCGGGGCCGGGAAAAGACGACCTACA
ACCGTAGTCCTATACACCGATCCGAGAGGAGAGGGTAGCAGGAACGGGGT
CGGGACGGTCCACACCGTAGTCCTATACACCCATCCGCGAGGAGAGGGTA
ACAGGAGCGGGGCCGGGAAAAGACGACCTCAACCGTAGTCCTTTACACAG
GAACGGGGTCGGGAAGCCACGGGCTCACACCACGAGCAAACAACTCCTAC
GACAGGAGAGATCGCTGCGACAGCAAGAAACACCAGCATCAGCCTGTACA
CCACAAGGCAACAGGAGCGCATCGCGATAGGAAAGGCACATCAAGATGGG
TGATAATCCCCCCGTCGACAACACCACTAACCTCGCCAACACCATTCGAG
GACTGAAGAAGTTCGATGGAAGGAACCCAGCCGAATTCAAAGGTTGGATG
AAGAAACTCTGCGTCGTCCTGGGAGTTACACGCAGGGACATTCTCCCGCT
GCTTAAAGACGAACGCAGGCCTGCCCAAACGGATACTGCTGCCTACGCCG
CCTACTGCAAGTCGAACGAGGACTTGTACGCCATACTCTACTTGCTAGTG
GAACTACCGGCGGCCCTTTCGGTGCAGAAGCACGAGGATGACAACGAGAT
CAGCGGAGACGGACAGGCGGCCTTCAGGGAACTGAACCTGAACTACAACA
AGGTTACGGACGAAGTGATTCGAGCCACCATGGAGGAGCTGGTCAACACG
CCCATGGAGCCAGGACAGAACCCGGACGACTACTTCAATCAGAAGCACCT
CCTTCGACACAAGGTCCAGAAGATGGGGGAGACCATCTCGGACCGCTACT
TCAAGGATATATGCGTCACAGGATTCACCGACGAGTACAAGGACGTGAAG
ATGATCATGTACCGCGACCCAGACTTTAACGTCGACCAGATGCAGACCAC
CATGCGGCACATGTTTCTGGACGAACAATCTCGCAAAGGATCCAAAGGTG
GCATTGCCGGCCGCGGCTTCGCCATGGCCACAACCACATCGGGGACCTGT
TTCGAATGCGGCGAGAATGGACACATCCGCAGGAACTGCCCCCGAAAGAG
AGGCAAGGGAAGAATGCAGAGGACCAAGCCGGCGGGAGCCGCCAAGTGGT
GCTCCGTTCACTTCACGACCAAACACTCCGACGAAGAATGCTACGAGCAA
GGAGCGAAGCGGCCGGAAAAATCGAACGACACGGGCAAGGCTTTCTCGGC
ATGTACGCACTGCACGCACTGCTCTTCAGCTAGCTACAAGAAGGGGCCAG
CCACTGCGAAGGAGTCGAGCAGCAAGAAATCCGCAATCGACTTTAGTGCG
GACGGCGACGAGTCCGATGAAGGATTCATGTACGCCACCACTCATAACGG
CAAGGAAGTCAAAGTCAACACTGCAGGAGCCACCCTACTTGTAGACACCG
GCGCAACAGAGACCATGCTCGACGACCGCCTCATCCCAGGCCTGAAGGAG
ATCATGCAAGAGTACAAGCAACTCGTGAAGCCGAAGGCCATCACGGT
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Coding sequence (CDS) from alignment at H-paniculata_contig14252:569..2465+

>mRNA_H-paniculata_contig14252.2579.1 ID=mRNA_H-paniculata_contig14252.2579.1|Name=mRNA_H-paniculata_contig14252.2579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2166bp|location=Sequence derived from alignment at H-paniculata_contig14252:569..2465+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGGACAAGACGACGAGTTTAGCAACCGGGCCTTCCAGGTACACCAGACT
TTTGTGCTTCCGACAGCAGCGAAGGTTCAGGACGGACGGTTCAAGTTTCG
GGTCGGAGATCAACAAGAAGATACGGGGTCGAGCCAGGACAGACGAGCTC
GACTCAGGAAGACAAGTGGACAAGACGACGAGTTTAGCAACCGGGCCTTC
CAGGTACACCAGACTTTTGTGCTTCCGACAGCAGCGAAGGTTCAGGACGG
ACGGTTCAAGTTTCGGGTCGGAGATCAACAAGAAGATACGGGGTCGAGCC
AGGACAGACGAGCTCGACTCAGGAAGACAAAAGCACGAGGATGACAACGA
GATCAGCGGAGACGGACAGGCGGCCTTCAGGGAACTGAACCTGAACTACA
ACAAGGTTACGGACGAAGTGATTCGAGCCACCATGGAGGAGCTGGTCAAC
ACGCCCATGGAGCCAGGACAGAACCCGGACGACTACTTCAATCAGAAGCA
CCTCCTTCGACACAAGGTCCAGAAGATGGGGGAGACCATCTCGGACCGCT
ACTTCAAGGATATATGCGTCACAGGATTCACCGACGAGTACAAGGACGTG
AAGATGATCATGTACCGCGACCCAGACTTTAACGTCGACCAGATGCAGAC
CACCATGCGGCACATGTTTCTGGACGAACAATCTCGCAAAGGATCCAAAG
GTGGCATTGCCGGCCGCGGCTTCGCCATGGCCACAACCACATCGGGGACC
TGTTTCGAATGCGGCGAGAATGGACACATCCGCAGGAACTGCCCCCGAAA
GAGAGGCAAGGGAAGAATGCAGAGGACCAAGCCGGCGGGAGCCGCCAAGT
GGTGCTCCGTTCACTTCACGACCAAACACTCCGACGAAGAATGCTACGAG
CAAGGAGCGAAGCGGCCGGAAAAATCGAACGACACGGGCAAGGCTTTCTC
GGCATGTACGCACTGCACGCACTGCTCTTCAGCTAGCTACAAGAAGGGGC
CAGCCACTGCGAAGGAGTCGAGCAGCAAGAAATCCGCAATCGACTTTAGT
GCGGACGGCGACGAGTCCGATGAAGGATTCATGTACGCCACCACTCATAA
CGGCAAGGAAGTCAAAGTCAACACTGCAGGAGCCACCCTACTTGTAGACA
CCGGCGCAACAGAGACCATGCTCGACGACCGCCTCATCCCAGGCCTGAAG
GAGATCATGCAAGAGTACAAGCAACTCGTGAAGCCGAAGGCCATCACGAA
GCACGAGGATGACAACGAGATCAGCGGAGACGGACAGGCGGCCTTCAGGG
AACTGAACCTGAACTACAACAAGGTTACGGACGAAGTGATTCGAGCCACC
ATGGAGGAGCTGGTCAACACGCCCATGGAGCCAGGACAGAACCCGGACGA
CTACTTCAATCAGAAGCACCTCCTTCGACACAAGGTCCAGAAGATGGGGG
AGACCATCTCGGACCGCTACTTCAAGGATATATGCGTCACAGGATTCACC
GACGAGTACAAGGACGTGAAGATGATCATGTACCGCGACCCAGACTTTAA
CGTCGACCAGATGCAGACCACCATGCGGCACATGTTTCTGGACGAACAAT
CTCGCAAAGGATCCAAAGGTGGCATTGCCGGCCGCGGCTTCGCCATGGCC
ACAACCACATCGGGGACCTGTTTCGAATGCGGCGAGAATGGACACATCCG
CAGGAACTGCCCCCGAAAGAGAGGCAAGGGAAGAATGCAGAGGACCAAGC
CGGCGGGAGCCGCCAAGTGGTGCTCCGTTCACTTCACGACCAAACACTCC
GACGAAGAATGCTACGAGCAAGGAGCGAAGCGGCCGGAAAAATCGAACGA
CACGGGCAAGGCTTTCTCGGCATGTACGCACTGCACGCACTGCTCTTCAG
CTAGCTACAAGAAGGGGCCAGCCACTGCGAAGGAGTCGAGCAGCAAGAAA
TCCGCAATCGACTTTAGTGCGGACGGCGACGAGTCCGATGAAGGATTCAT
GTACGCCACCACTCATAACGGCAAGGAAGTCAAAGTCAACACTGCAGGAG
CCACCCTACTTGTAGACACCGGCGCAACAGAGACCATGCTCGACGACCGC
CTCATCCCAGGCCTGAAGGAGATCATGCAAGAGTACAAGCAACTCGTGAA
GCCGAAGGCCATCACG
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