mRNA_H-paniculata_contig14227.2567.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14227.2567.1 vs. uniprot
Match: A0A6H5JES4_9PHAE (Misat_Tub_SegII domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JES4_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 6.220e-21 Identity = 49/68 (72.06%), Postives = 53/68 (77.94%), Query Frame = 1 Query: 1 KIGRYANFVGTHFWNFEDELLLLGSKGGVVDEYYNHGVLHR-APA-SEGGA------RTPRLVAFDTR 180 ++GRYANFVGTHFWNF+DELLLL S+GGVVD Y HGVLHR AP S GG RTPRLVAFDTR Sbjct: 13 QVGRYANFVGTHFWNFQDELLLLASRGGVVDASYEHGVLHRQAPERSRGGGGGASVERTPRLVAFDTR 80
BLAST of mRNA_H-paniculata_contig14227.2567.1 vs. uniprot
Match: UPI0006A7349F (uncharacterized protein LOC106328727 n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A7349F) HSP 1 Score: 57.4 bits (137), Expect = 1.610e-8 Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 1 KIGRYANFVGTHFWNFEDELLLLGSKGGVVDEYYNHG----VLHRAPASEGGART--PRLVAFDTRQGKPGKSTSILLYFVRSK 234 ++G +ANF+G+HFWNF+DELL L S + NH VL+R+ ++ G T PRL++ + + +S++L F+ S+ Sbjct: 9 QVGEFANFIGSHFWNFQDELLALASDPESDPIFPNHNLDMDVLYRSGENQQGVSTYTPRLLSVNFEVATRWRPSSVILPFLESR 92
BLAST of mRNA_H-paniculata_contig14227.2567.1 vs. uniprot
Match: A0A835Z5A4_9STRA (Tubulin/FtsZ, GTPase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A4_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.450e-8 Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 1 Query: 1 KIGRYANFVGTHFWNFEDELL--LLGSKGGVVDEYYNHGVLHRAPASEGGARTPRLVAFDTR 180 +IGRYANFVGTH+WNF+DEL GG + + Y+ V+ +S G TPRL+ FDTR Sbjct: 27 QIGRYANFVGTHYWNFQDELWGWAQDQPGGTLLDPYDPAVMF---SSAGRVVTPRLLIFDTR 85
BLAST of mRNA_H-paniculata_contig14227.2567.1 vs. uniprot
Match: A0A1U7V4B8_NICSY (protein misato homolog 1-like n=1 Tax=Nicotiana sylvestris TaxID=4096 RepID=A0A1U7V4B8_NICSY) HSP 1 Score: 58.5 bits (140), Expect = 3.040e-8 Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 1 KIGRYANFVGTHFWNFEDELLLLGSKGGVVDEYYNHG----VLHRAPASEGGART--PRLVAFDTRQGKPGKSTS 207 ++G YANF+G+HFWNF+DELL L G + NHG VL+R ++ G T PR+V+ + QG G +S Sbjct: 8 QVGNYANFIGSHFWNFQDELLGLAESPGTDQVFRNHGLDMDVLYRTGETQQGVLTYTPRMVSVNF-QGSLGSLSS 81
BLAST of mRNA_H-paniculata_contig14227.2567.1 vs. uniprot
Match: A0A1S4A7C6_TOBAC (protein misato homolog 1-like n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S4A7C6_TOBAC) HSP 1 Score: 58.5 bits (140), Expect = 3.330e-8 Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 1 KIGRYANFVGTHFWNFEDELLLLGSKGGVVDEYYNHG----VLHRAPASEGGART--PRLVAFDTRQGKPGKSTS 207 ++G YANF+G+HFWNF+DELL L G + NHG VL+R ++ G T PR+V+ + QG G +S Sbjct: 8 QVGNYANFIGSHFWNFQDELLGLAESPGTDQVFRNHGLDMDVLYRTGETQQGVLTYTPRMVSVNF-QGSLGSLSS 81
BLAST of mRNA_H-paniculata_contig14227.2567.1 vs. uniprot
Match: A0A6P6W111_COFAR (protein misato homolog 1-like n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6W111_COFAR) HSP 1 Score: 58.2 bits (139), Expect = 4.560e-8 Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 1 KIGRYANFVGTHFWNFEDELLLLGSKGGVVDEYYNHG----VLHRAPASEGG--ARTPRLVAFDTRQGKPGKSTS 207 ++G YANF+G+HFWNF+DELL L + NHG VL+R ++ G TPRLV+ D QG G +S Sbjct: 8 QVGGYANFIGSHFWNFQDELLGLAETSETNPAFKNHGLNMDVLYRTGETQQGILTYTPRLVSVDF-QGSLGSMSS 81
BLAST of mRNA_H-paniculata_contig14227.2567.1 vs. uniprot
Match: A0A1R3GF86_COCAP (Uncharacterized protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3GF86_COCAP) HSP 1 Score: 57.0 bits (136), Expect = 1.160e-7 Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 1 KIGRYANFVGTHFWNFEDELLLLGSKGGVV--DEYYNHGVLHRAPASEGGART--PRLVAFDTRQGKPGKSTS 207 ++G +ANF+G+HFWNF+DE+L L S G + E N VL+R S G RT PRL++ D QG G +S Sbjct: 8 QVGGFANFIGSHFWNFQDEMLGLDSYGDPLFKTESLNMDVLYRTGESPQGTRTYTPRLLSIDF-QGSLGSMSS 79
BLAST of mRNA_H-paniculata_contig14227.2567.1 vs. uniprot
Match: S8C7Y2_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C7Y2_9LAMI) HSP 1 Score: 56.6 bits (135), Expect = 1.590e-7 Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 1 Query: 1 KIGRYANFVGTHFWNFEDELLLLGSKGGVVDEYYNHG----VLHRAPASEGG--ARTPRLVAFD 174 ++G YANFVG+HFWNF+DELL L D + NHG VL+R ++ G TPRLV+ D Sbjct: 8 QVGSYANFVGSHFWNFQDELLGLAESD---DNFKNHGLNMDVLYRTGETQQGILTYTPRLVSVD 68
BLAST of mRNA_H-paniculata_contig14227.2567.1 vs. uniprot
Match: A0A2P2LQU1_RHIMU (Uncharacterized protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LQU1_RHIMU) HSP 1 Score: 55.8 bits (133), Expect = 2.690e-7 Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 1 KIGRYANFVGTHFWNFEDELLLLGSKGGVVD-------EYYNHGVLHRAPASEGG--ARTPRLVAFDTRQGKPGKSTS 207 ++G YANFVG+HFWNF+DELL L ++G D +Y N VL+RA ++ G TPRL++ D QG G +S Sbjct: 8 QVGGYANFVGSHFWNFQDELLGL-AEGPDSDPVFKNHQDYLNMDVLYRAGETQQGILTYTPRLLSID-HQGSLGSVSS 83
BLAST of mRNA_H-paniculata_contig14227.2567.1 vs. uniprot
Match: A0A2C9UA69_MANES (Uncharacterized protein n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9UA69_MANES) HSP 1 Score: 55.8 bits (133), Expect = 2.970e-7 Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 1 KIGRYANFVGTHFWNFEDELLLLGSKGGVVDEYYNH------GVLHRAPASEGGART--PRLVAFDTRQGKPGKSTS 207 ++G +ANF+G+HFWNF+DELL LG+ G + NH VL+R ++ G T PRLV+ ++ QG G +S Sbjct: 8 QVGGFANFIGSHFWNFQDELLGLGADHGSDTVFRNHHQFLNMDVLYRNGETQQGVLTYTPRLVSINS-QGSLGSMSS 83 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14227.2567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14227.2567.1 >prot_H-paniculata_contig14227.2567.1 ID=prot_H-paniculata_contig14227.2567.1|Name=mRNA_H-paniculata_contig14227.2567.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp KIGRYANFVGTHFWNFEDELLLLGSKGGVVDEYYNHGVLHRAPASEGGARback to top mRNA from alignment at H-paniculata_contig14227:1296..1529+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14227.2567.1 ID=mRNA_H-paniculata_contig14227.2567.1|Name=mRNA_H-paniculata_contig14227.2567.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=234bp|location=Sequence derived from alignment at H-paniculata_contig14227:1296..1529+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14227:1296..1529+ >mRNA_H-paniculata_contig14227.2567.1 ID=mRNA_H-paniculata_contig14227.2567.1|Name=mRNA_H-paniculata_contig14227.2567.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=468bp|location=Sequence derived from alignment at H-paniculata_contig14227:1296..1529+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |