mRNA_H-paniculata_contig142.2548.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig142.2548.1 vs. uniprot
Match: D8LB55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB55_ECTSI) HSP 1 Score: 758 bits (1956), Expect = 9.260e-265 Identity = 374/553 (67.63%), Postives = 444/553 (80.29%), Query Frame = 1 Query: 37 PPDGMIWPLVPNSRKEGDRSTMSANKRAFCAATRAVDCPLSLEMLNEKKWRKTYTRHAYNHVVTCLESKDAAVACAQAGLDWMHHNFDFVKDGEEMSLAQAMTNVDDSFFTGFVRGTKPRPTSTVLEVPYKGEILTGKRLHDQVDKWVSHGTIEPSAGEAIKDVSLNDSWRDLSDKYFVLLGAGSAMGPLKFLLDLGANIIAIDLGRQHIWERLLSLAENSSGTMTFPIRVGRPQSGLKTMEELCEAAGANLLTQTPDILNWVKSICPDGPVVVGSYAYLDGELHVRLSLAMDAIVNGLIESRPDIIPAYLCTPTDIHVIPQAAHEAAQQQYSSLGFVNMLCRLTINGLGSLAVNAKKPVVAKDGSTFYLVDGLVKKQGPNYALAKRLQHWRAVVSRHTHGCRVSSNIAPSTATASVVSNKLFALAYGGMKFFKPMEVFQQETSNAVMGALLLRDVCDPATPSNPSLPLKNPLQLFSYGSFHGGVWRMAYTMNSIGTPAVLAYLLQYLGFLVLILLSVVCLGFVGIKIAKGENVVEDMQS-------LFKGEL 1674 P DG++WPLVPNS+K GDRST ANK+A AA AVD L+ +L+E+ WR+ YT++ Y HV CL+SK+AAVA ++AGL+W+H+NF+FV++G+ M LA AM+++ SF T ++GTKP+PT TVL+VPYK EILTG L DQVDKWVS+GTIEPSAG AIKDVS WRDLSD+YFVLLGAGSAMGPLK LL+LGANI+AIDL R IW+RLL LAENS GTM FP++ G+PQ+ L + EELC AAGANLL TP+ILNW+K++ P+ P+VVGSYAYLDGELHVRLSLAMDAIV GL ESR D++PAYLCTPTD+HVIP AAH+AA Q SLG VN+LC+LT N +L N K VV DG + YLVDGLV KQGPNYALAKR+QHWRAVV+R + C+VSSNIAPSTATASVVSN+LFA+AYGGM FF+PMEVFQQETSNAVMGALLLRDV DPATPSNP+LPLKNPLQLFS+GSFHGGVWRMAYT++SIGT +VLAYLL L L+ L +GF +K GEN +E + LFKGEL Sbjct: 7 PLDGLVWPLVPNSKKAGDRSTTWANKQALAAAIGAVDPALAQRVLDERNWRQKYTKYVYKHVEACLQSKEAAVASSKAGLEWVHNNFEFVREGKSMKLAAAMSSITGSFETAVIKGTKPKPTETVLQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQASLSSREELCAAAGANLLAHTPEILNWLKTVSPEKPLVVGSYAYLDGELHVRLSLAMDAIVKGLTESRRDVMPAYLCTPTDVHVIPSAAHDAAASQARSLGLVNLLCKLTGNLAMTLTSNVKPAVVGADGGSLYLVDGLVNKQGPNYALAKRMQHWRAVVARQEYRCKVSSNIAPSTATASVVSNRLFAMAYGGMHFFQPMEVFQQETSNAVMGALLLRDVADPATPSNPTLPLKNPLQLFSFGSFHGGVWRMAYTIDSIGTASVLAYLLVGLLSLLKYFLLAFVVGFAAMKAKDGENPLEALDGVKDSVLGLFKGEL 559
BLAST of mRNA_H-paniculata_contig142.2548.1 vs. uniprot
Match: A0A835Z6A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A9_9STRA) HSP 1 Score: 570 bits (1470), Expect = 1.300e-191 Identity = 308/553 (55.70%), Postives = 384/553 (69.44%), Query Frame = 1 Query: 10 MPPPMKEDFPPDGMIWPLVPNSRKEGDRSTMSANKRAFCAATRAVDCPLSLEMLNEKKWRKTYTRHAYNHVVTCLESKDAAVACAQAGLDWMHHNFDFVKDGEEMSLAQAMTNVDDSFFTGFVRGTKPRP-TSTVLEVPYKGEILTGKRLHDQVDKWVSHGTIEPSAGEAIKDVSLNDSWRDLSDKYFVLLGAGSAMGPLKFLLDLGANIIAIDLGRQHIWERLLSLAENSSGTMTFPIRVGRPQSGLKTMEELCEAAGANLLTQTPDILNWVKSICPDGPVVVGSYAYLDGELHVRLSLAMDAIVNGLIESR---PDIIPAYLCTPTDIHVIPQAAHEAAQQQYSSLG--FVNMLCRLTINGLGSLAVNAKKPVVAKDGS-TFYLVDGLVKKQGPNYALAKRLQHWRAVVSRHTHGCRVSSNIAPSTATASVVSNKLFALAYGGMKFFKPMEVFQQETSNAVMGALLLRDVCDP-ATPSNPSLPLKNPLQLFSYGSFHGGVWRMAYTMNSIGTPAVLAYLLQYLGFLVLILLSVVCLGFVGIKIAKGENVVE 1644 MPPP + PP G+ WPLVPNS+KEGDRST ANK A AA+ A+ + + E+ WRK Y ++ HV CLE KD AV A+AGL W+H NF+F+KDG+ M L+ AM + +F T V G+ PRP T L +PYKG++L G L QV +WV +GTIEPSAG+AI V D WRDLSDKYFVLLGA SAMGPL+ LL+LGAN+IA+DL R HIW LL+LA SSGTMTFP + +GL T E++ AG NLLT+TP+IL+W++S P+VVG+YAYLDGELHVR+SLAMDAI+ GL E + P + PAYLCTPTDIHV A AA + YS L F +L + G L N + K T+YLVDGLV +QGPNYALAKR+QHWRAVV+R GC VSSNIAPSTATASV N+LFA+AYGGM +F+PMEVFQQETSNAVMGALLLRDV D A ++P++PL PLQ+FS+G+FHGGVWR+ + M++IG ++L YLL L + ++++VV G G+ A E Sbjct: 1 MPPPPRR--PPAGIQWPLVPNSKKEGDRSTTYANKAALKAASGAIRPEEAAAIDAERNWRKNYGKYLLRHVSACLEVKDGAVTAAEAGLQWVHDNFEFIKDGKTMPLSTAMATIKSTFKTATVTGSVPRPETPPPLRIPYKGKVLEGGELERQVVRWVEYGTIEPSAGDAILTVMRTDEWRDLSDKYFVLLGASSAMGPLRLLLELGANVIAVDLDRPHIWTSLLALARASSGTMTFPTK--GDTAGL-TDEQIAGVAGCNLLTETPEILDWLRSTHAGKPLVVGAYAYLDGELHVRVSLAMDAIIKGLTEDKAAHPAVTPAYLCTPTDIHVSTADARAAAAKNYSPLSSPFAALLRLTPLFWFGPLRPNFGGRLTVKGPEETYYLVDGLVNRQGPNYALAKRMQHWRAVVARARGGCAVSSNIAPSTATASVTHNRLFAMAYGGMHWFRPMEVFQQETSNAVMGALLLRDVSDRRAKGASPAVPLSTPLQIFSFGAFHGGVWRLGFKMDTIGEASILMYLLVKL-LKLXVVVAVVGAGTAGLIAASKHTAAE 547
BLAST of mRNA_H-paniculata_contig142.2548.1 vs. uniprot
Match: W7TMF0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF0_9STRA) HSP 1 Score: 491 bits (1264), Expect = 5.780e-160 Identity = 269/528 (50.95%), Postives = 344/528 (65.15%), Query Frame = 1 Query: 49 MIW---PLVPNSRKEGDRS--------TMSANKRAFCAATRAVDCPLSLEMLNEKKWRKTYTRHAYNHVVTCLESKDAAVACAQAGLDWMHHNFDFVKDGEEMSLAQAMTNV--DDSFFTGFVRGTKPRPT-STVLEVPYKGEILTGKRLHDQVDKWVSHGTIEPSAGEAIKDVSLNDSWRDLSDKYFVLLGAGSAMGPLKFLLDLGANIIAIDLGRQHIWERLLSLAENSSGTMTFPIRVGRPQSGLKTMEELCEAAGANLLTQTPDILNWVKSICPDGPVVVGSYAYLDGELHVRLSLAMDAIVNGLIESRPDIIPAYLCTPTDIHVIPQAAHEAAQQQYSSLGFVNMLCRLTI---NGLGSLAVNAKKPVVAKDGSTFYLVDGLVKKQGPNYALAKRLQHWRAVVSRHTHGCRVSSNIAPSTATASVVSNKLFALAYGGMKFFKPMEVFQQETSNAVMGALLLRDVCDPATPSNPSLPLKNPLQLFSYGSFHGGVWRMAYTMNSIGTPAVLAYLLQY-LGFLVLI 1578 +IW P VP +K S + NK A+ AA AVD L++ EK+WR+ Y ++ V L+S AV+ AQ GL++ + NF+F++DG+ L +AM S+ TG ++G P V +VPY ++L G+ L Q ++W +GT+EPSA +AI + N DLSDKYFVLLGAGSAMGP LL LGANIIAIDL RQ IWERL+ S GT+ FP++ + QS LKT E+ AG NL T TP++ W+ + +VVG+YAYLDGELHV++SLAMDAI+ L R PAYLCTPTD+HVI + AH+AA Q+ L VN++C+L++ G G L NA PV A+DG Y VDG+V +QGPNYALAKR+QHWRAVV+R VSSNIAPSTAT SV SNKLFALAY G FFKP+EVFQQETSNAVM A+L+ D+ +P PSNP ++NPL+LF+YGS HGG+WRMAY ++SIG PA YL LG LVL+ Sbjct: 35 LIWGNQPRVPRDQKLASYSLRIKRAAGSTFGNKGAWAAAVGAVDKAEGLKIEKEKQWRQKYAKYIVRQVQVGLKSPKNAVSVAQGGLEYCYQNFEFIRDGKTYKLGEAMEKFGGSHSYETGVIKGEGKLPKFGPVCQVPYGKKVLEGEALRAQFEQWARYGTVEPSARDAISYLIDNPKVLDLSDKYFVLLGAGSAMGPFLTLLALGANIIAIDLDRQGIWERLIRETRKSPGTLIFPLK--KKQSTLKTDPEVAAQAGGNLFTDTPELRAWLMGVETGKDLVVGAYAYLDGELHVKVSLAMDAIIRDLTRLRK-ATPAYLCTPTDVHVISKEAHDAAAAQHCELSLVNLVCKLSLFNLPGSGYLVKNALPPVRAEDGEEIYFVDGIVGRQGPNYALAKRIQHWRAVVAREVDKVNVSSNIAPSTATVSVTSNKLFALAYKGFHFFKPLEVFQQETSNAVMAAMLIHDIRNPNVPSNPKNKIRNPLELFTYGSLHGGIWRMAYKIDSIGEPAAFLYLFTTPLGMLVLV 559
BLAST of mRNA_H-paniculata_contig142.2548.1 vs. uniprot
Match: A0A139AEM4_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AEM4_GONPJ) HSP 1 Score: 477 bits (1227), Expect = 1.690e-155 Identity = 259/507 (51.08%), Postives = 340/507 (67.06%), Query Frame = 1 Query: 37 PPDGMIWPLVPNSRKEGDRSTMSANKRAFCAATRAVDCPLSLEMLNEKKWRKTYTRHAYNHVVTCLESKDAAVACAQAGLDWMHHNFDFVKDGEEMSLAQAM-TNVDDSFFTGFVRGTKPRPTST-VLEVPYKGEILTGKRLHDQVDKWVSHGTIEPSAGEAIKDVSLNDSWRDLSDKYFVLLGAGSAMGPLKFLLDLGANIIAIDLGRQHIWERLLSLAENSSGTMTFPIRVGRPQSGLKTMEELCEAAGANLLTQTPDILNWVKSICPDGPVVVGSYAYLDGELHVRLSLAMDAIVNGLIESRPDIIPAYLCTPTDIHVIPQAAHEAAQQQYSSLGFVNMLCRLTINGLGSLAVNAKKPVVAKDGST-FYLVDGLVKKQGPNYALAKRLQHWRAVVSRHTHGCRVSSNIAPSTATASVVSNKLFALAYGGMKFFKPMEVFQQETSNAVMGALLLRDVCDPATPSNPSLPLKNPLQLFSYGSFHGGVWRMAYTMNSIGTPAVLAYL 1548 P DG+++P P+ ++ G+R + NK A+ AA A+ + ++ EK WR YT++ V S A+A A+ GLD+ ++NF+FV++G+ +L QA+ T F TGF++GT +P VL+VPYKG+ L+G L Q+D+W S+GTIE +A + I +V N W DLSDKYF LLGAGSAMGP L+ LGANIIAIDL R IW+RL+S+A NS GT+TFP+ + + + EEL E AG NL TQTP+I WV S+ PD + VG+YAYLDGELHV++SLAMDAI+ + R AYLCTPTD+HVI A +A + YSS G + L + N +KPV DG V+G+V +QGPNYALAKR+QHWRA+V+R T G VSSNIAPST+TASV N+LFA AYGGM FKPMEVF ETSNAVM ALL+ DV +P + ++PS+ L NPL+LF GSFHGGVWR A+ +N+IGTP+ + YL Sbjct: 9 PEDGLVFP--PDPKRPGERGSTFGNKGAWAAAIGAISPADAEKIQKEKDWRNNYTKYIIKQVEESARSPQKAIAVAKGGLDYCYNNFEFVREGKVSTLQQALDTYTTPIFKTGFIKGTGEKPKGGYVLKVPYKGKELSGDALLAQLDRWYSYGTIEKTARDYIAEVVKNQQWLDLSDKYFCLLGAGSAMGPFLTLMALGANIIAIDLNRAPIWKRLISVARNSPGTITFPLLGDQDKM---SDEELFEKAGCNLFTQTPEIRTWVLSVYPDKHITVGAYAYLDGELHVKVSLAMDAIIRDMTTKRK-AGAAYLCTPTDVHVITSDAAKAERDNYSSFGVATLF-----KYLPGMPPNFRKPVKTDDGKKEINYVNGIVDRQGPNYALAKRIQHWRAMVAR-TEGSIVSSNIAPSTSTASVTHNRLFAWAYGGMHHFKPMEVFAPETSNAVMAALLINDVRNPNSVAHPSVTLDNPLELFREGSFHGGVWRTAFPVNAIGTPSAIVYL 503
BLAST of mRNA_H-paniculata_contig142.2548.1 vs. uniprot
Match: A0A7S3W6Z5_9SPIT (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3W6Z5_9SPIT) HSP 1 Score: 468 bits (1203), Expect = 3.220e-149 Identity = 246/512 (48.05%), Postives = 320/512 (62.50%), Query Frame = 1 Query: 22 MKEDFPP--DGMIWPL--VPNSRKEGDRSTMSANKRAFCAATRAVDCPLSLEMLNEKKWRKTYTRHAYNHVVTCLESKDAAVACAQAGLDWMHHNFDFVKDGEEMSLAQAMTNVDDSFFTGFVRGTKPRPTSTVLEVPYKGEILTGKRLHDQVDKWVSHGTIEPSAGEAIKDVSLNDSWRDLSDKYFVLLGAGSAMGPLKFLLDLGANIIAIDLGRQHIWERLLSLAENSSGTMTFPIRVGRPQSGLKTMEELCEAAGANLLTQTPDILNWVKSICPDGPVVVGSYAYLDGELHVRLSLAMDAIVNGLIESRPDIIPAYLCTPTDIHVIPQAAHEAAQQQYSSLGFVNMLCRLTINGLGSLAVNAKKPVVAKDGSTFYLVDGLVKKQGPNYALAKRLQHWRAVVSRHTHGCRVSSNIAPSTATASVVSNKLFALAYGGMKFFKPMEVFQQETSNAVMGALLLRDVCDPATPSNPSLPLKNPLQLFSYGSFHGGVWRMAYTMNSIGTPAVLAY 1545 MK PP DG+ WP+ V K+ RST + K A AVD + + +EK WR Y RH V S +AA+ A AGLD+M+ F+F++DG+ L A+ SF TGF++G KP+P LEVPY G+IL G L Q+DKWV G E S G AI V+ + W DLSD+YFVLLGAG+AMGP + LL LGANIIA+D+GR IW+RL+S ++S GT+TFP++ G Q + L EAAG NL TQTP+I NW++ + P VG YAY+ G+L R++LAMD I+ L+E+R + A+LCTPTD H++P AAH AA+ + L G + NA+KP+ G T Y+VD LV QGPNYALAKR+QHWRA+++R G VSSN+APST T SV+ NKLF+ Y M FKP E+ E SN+VM ALL+ D+ +P NP +PL NP Q+FS GSFHGG WR A+T +SIG P+VL Y Sbjct: 3 MKRGPPPPIDGLSWPVTGVDEEGKQA-RSTQTTGKEILAVALEAVDASAAAAVRSEKGWRFKYRRHFVKSVEVSASSPEAALKVAAAGLDYMYDKFEFIRDGKTYVLRDALAQFKGSFATGFIKGNKPKPNKFELEVPYNGQILKGDSLQRQIDKWVRQGVCELSCGSAISQVANAEPWLDLSDRYFVLLGAGAAMGPFQVLLALGANIIAVDIGRPDIWKRLISQTKDSCGTLTFPMKPGFKQPSTPD-DSLYEAAGCNLFTQTPEIKNWLREVTPSEKACVGGYAYIPGDLFPRVALAMDVIIKELVETRGASV-AFLCTPTDAHLVPPAAHAAAKAAIKKAPLWQKMANLVSMGKWCVP-NARKPITTSAGETLYVVDALVVPQGPNYALAKRMQHWRAMLAREA-GVIVSSNVAPSTRTYSVMQNKLFSYGYATMHHFKPFEIPGPELSNSVMTALLIHDLNEPMHAGNPKMPLVNPQQIFSQGSFHGGAWRCAFTFDSIGAPSVLLY 509
BLAST of mRNA_H-paniculata_contig142.2548.1 vs. uniprot
Match: A0A6B2KYF3_9EUKA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYF3_9EUKA) HSP 1 Score: 466 bits (1199), Expect = 1.960e-148 Identity = 250/535 (46.73%), Postives = 344/535 (64.30%), Query Frame = 1 Query: 43 DGMIWPLVPNSRKEGDRSTMSANKRAFCAATRAVDCPLSLEMLNEKKWRKTYTRHAYNHVVTCLESKDAAVACAQAGLDWMHHNFDFVKDGEEMSLAQAMTNVDDSFFTGFVRGTKPRPTSTVLEVPYKGEILTGKRLHDQVDKWVSHGTIEPSAGEAIKDVSLNDSWRDLSDKYFVLLGAGSAMGPLKFLLDLGANIIAIDLGRQHIWERLLSLAENSSGTMTFPIRVGRPQSGLKTMEELCEAAGANLLTQTPDILNWVKSICPDGPVVVGSYAYLDGELHVRLSLAMDAIVNGLIESR-----PDIIPAYLCTPTDIHVIPQAAHEAAQQQYSSLGFVNMLCRLTINGLGSLAVNAKKPVVAKDGSTFYLVDGLVKKQGPNYALAKRLQHWRAVVSRHTHGCRVSSNIAPSTATASVVSNKLFALAYGGMKFFKPMEVFQQETSNAVMGALLLRDVCDPATPSNPSLPLKNPLQLFSYGSFHGGVWRMAYTMNSIG-TPAVLAYLLQYLGFLVLILLSVVCLGFVGIKIAKG 1629 DG+ +P+ G S+ NK A A+ +A+ + + +E+ WR Y RH +V CL + A+ +QAGLD++H NF F ++ E+MS AMTN++ +F+TG ++G K R T T VPYK + L G L Q+D+W +GTIEP A +AI V N W DLSDKYFVLLGAGSAMGPL LL LGAN+IA+DL R++IW+ L + +NS GT+ +PIR +P + +E+ ++AG NL T+ P+I NW+ +I P+ P++VG+YAYLDG LHV++S+AMD I++ L +R P + AYLCTPTD+HVI A+E ++ Y + L + LG + N + K+G F +VDGLV +QGPNY LAKR+QHWRAVVSR + G VSSN+APST+T SVVSNK FA AYG M FFKPME+F Q+TSNAVM ALLL D+ +P + +NP + L NP +LF GSFHGG+WR + +G A+L YL Y L I +S + + V + + +G Sbjct: 215 DGLEFPI---EAATGQPSSTILNKGAMAASVKAIKPEAAKRVEDERNWRFRYDRHLIENVKLCLADPEDAIKISQAGLDYLHENFSFYRNKEQMSFKDAMTNINSTFYTGILKGEKERTTKTYT-VPYKDKQLQGAELLKQLDEWAKYGTIEPEARDAIAMVVKNPEWLDLSDKYFVLLGAGSAMGPLLVLLSLGANVIAVDLNRENIWKNLFTQTKNSPGTLYYPIR--KPFEEYASEDEIVKSAGCNLFTEAPEIKNWLTTIVPNEPLIVGAYAYLDGPLHVKVSVAMDGIISALCNTRASPKGPGLTIAYLCTPTDVHVITDEAYEDEKKNYRNAP----LWLKVLEKLGFIHKNQIPEIPGKNGK-FKIVDGLVIQQGPNYTLAKRIQHWRAVVSR-SRGIPVSSNVAPSTSTVSVVSNKSFAAAYGAMHFFKPMEIFFQQTSNAVMCALLLHDIFNPESVTNPKVKLANPFELFKIGSFHGGIWRTGFHFGELGFVSALLFYLRTYAKPLAFISISTI-VALVSLLVQRG 736
BLAST of mRNA_H-paniculata_contig142.2548.1 vs. uniprot
Match: A0A7S1YXL8_TRICV (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YXL8_TRICV) HSP 1 Score: 464 bits (1194), Expect = 1.770e-147 Identity = 250/518 (48.26%), Postives = 331/518 (63.90%), Query Frame = 1 Query: 1 KFIMPPPMKEDFPPDGMIWPLVPNSRKEGDRSTMSANKRAFCAATRAVDCPLSLEMLNEKKWRKTYTRHAYNHVVTCLESKDAAVACAQAGLDWMHHNFDFVK-DGEEMSLAQAMTN-VDDSFFTGFVRGTKPRPTSTVLEVPYKGEILTGKRLHDQVDKWVSHGTIEPSAGEAIKDVSLNDSWRDLSDKYFVLLGAGSAMGPLKFLLDLGANIIAIDLGRQHIWERLLSLAENSSGTMTFPIRVGRPQSGLKTMEELCEAAGANLLTQTPDILNWVKSICPDGPVVVGSYAYLDGELHVRLSLAMDAIVNGLIESRPDIIPAYLCTPTDIHVIPQAAHEAAQQQYSSLGFVNMLCRLTINGLGS-LAVNAKKPVVAKDGSTFYLVDGLVKKQGPNYALAKRLQHWRAVVSRHTHGCRVSSNIAPSTATASVVSNKLFALAYGGMKFFKPMEVFQQETSNAVMGALLLRDVCDPATPSNPSLPLKNPLQLFSYGSFHGGVWRMAYTMNSIGTPAVLAY 1545 +F PPP PP G+++P+ N RS+ K AA AVD + ++ E+ WR Y +H + V S +AA+ AQAG+D + F FVK DG MS+ + M + + F TGF++G + VL VPYKG ++G+ L DQV KWV +GTIEPSAG+AI N W DLSD+YFVLLGAGSAMGP K L+ LGAN++AIDL R IWERL+ +A SSG++TFP+ +PQ KT +L AG NL TQTP I +W+ + P P VGSYAYLDG LHV++SLAMD I L E RP+ YLCTPTD+H++P+ A+ AA++ Y + + G L NA+KPV +G +++++G+ QGPNY LAKR+QHWRAV++R + GC VSSNIAPST+T SVV N+ FA AY GM +F+P E+F+ + S AVM +L+ D+ DP + +NPS L NP QLFSYGSFHGG WR AY ++SIG +VL Y Sbjct: 225 RFAKPPP-----PPRGIVFPVSGNKGGIEVRSSTPVGKAILSAAVGAVDSEKAAKVEKERSWRFKYVKHIISMVEAQCASPEAALKVAQAGIDKAYEVFQFVKPDGTTMSVKEVMASKAETQFSTGFIKG-QGASEKNVLSVPYKGGSISGQALKDQVKKWVDYGTIEPSAGDAICACVDNPGWMDLSDRYFVLLGAGSAMGPFKVLMALGANVVAIDLDRPGIWERLIDVARKSSGSITFPL--SKPQEDCKTDADLYAVAGCNLFTQTPAIRDWLLDLYPGKPFTVGSYAYLDGALHVQVSLAMDCITRDLSEKRPNTSLVYLCTPTDLHLVPEEANRAAEKNYKEFSKKPYCILMNLLSQGKFLRKNARKPVQG-EGGDYFMINGVSVAQGPNYILAKRMQHWRAVIAR-SKGCIVSSNIAPSTSTVSVVHNRTFAWAYEGMPYFRPYEIFEPDVSKAVMLGILMSDLNDPKSAANPSTKLGNPNQLFSYGSFHGGTWRCAYEVDSIGEASVLLY 732
BLAST of mRNA_H-paniculata_contig142.2548.1 vs. uniprot
Match: A0A1E7FRX0_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRX0_9STRA) HSP 1 Score: 464 bits (1194), Expect = 2.110e-147 Identity = 260/519 (50.10%), Postives = 340/519 (65.51%), Query Frame = 1 Query: 1 KFIMPPPMKEDFPPDGMIWPLVPNSRKEGDRSTMSANKRAFCAATRAVDCPLSLEMLNEKKWRKTYTRHAYNHVVTCLESKDAAVACAQAGLDWMHHNFDFVK-DGEEMSLAQAM-TNVDDSFFTGFVRGTKPRPTSTVLEVPYKGEILTGKRLHDQVDKWVSHGTIEPSAGEAIKDVSLNDSWRDLSDKYFVLLGAGSAMGPLKFLLDLGANIIAIDLGRQHIWERLLSLAENSSGTMTFPIRVGRPQSGLKTMEELCEAAGANLLTQTPDILNWVKSICPDGPVVVGSYAYLDGELHVRLSLAMDAIVNGLIESRPDIIPAYLCTPTDIHVIPQAAHEAAQQQYSSLG--FVNMLCRLTINGLGSLAVNAKKPVVAKDGSTFYLVDGLVKKQGPNYALAKRLQHWRAVVSRHTHGCRVSSNIAPSTATASVVSNKLFALAYGGMKFFKPMEVFQQETSNAVMGALLLRDVCDPATPSNPSLPLKNPLQLFSYGSFHGGVWRMAYTMNSIGTPAVLAY 1545 +F PPP PP G+++P+ RS+ NK AA AV+ ++ K +R TY +H V S A + AQAGLD + F+F DG +S+ +AM T + F+TGFV+G + + V+E+PYKG+IL G+ L DQV WV +GTIEPSAGEAI N W DLSDKYFVLLGAGSAMGPL LL LGAN+IA+DL R IW+RL+ LA+ SSGT+TFP++ + QS LKT ++L +AG NL T TP I +W+ S+ P VGSYAYL+G LHV++SLAMDAI L E RP AYLCTPTD+H++P+ A +A+ Y F+ +L RL ++G L N + PV + +G FY+++G+ QGPNY LAKRLQHWRAV++R + GC VSSNIAP+T+TASVV N+ FA AY GM +FKP E+F ETSNAVM A+L D+ +P + NP+ PLKNP QLFS+G FHGG WR AY +++IG +VL Y Sbjct: 234 RFARPPP-----PPRGIVFPIEAGKNV---RSSTPVNKEILAAAVGAVNPAKGEKIRTAKGYRFTYVKHLCGLVDEQCTSPGACLKIAQAGLDKAYEIFEFAAPDGTAVSVKEAMSTKTSEKFYTGFVQGEGGKEDA-VIEIPYKGKILKGQALKDQVKSWVDYGTIEPSAGEAIIGCVDNPGWCDLSDKYFVLLGAGSAMGPLMVLLALGANVIAVDLDRPMIWKRLIGLAKKSSGTITFPLK--QEQSTLKTDDDLFASAGCNLFTHTPMIRDWLMSLYPGKNFTVGSYAYLNGALHVQVSLAMDAITRDLSEKRPGTSLAYLCTPTDLHLVPKEAWDASIANYKEYNSFFLCILMRL-LSGGKYLKKNTRSPV-SGEGGDFYMINGISVAQGPNYILAKRLQHWRAVIAR-SKGCIVSSNIAPATSTASVVQNRTFAWAYEGMPYFKPYEIFAPETSNAVMSAILFSDLNNPKSAGNPNTPLKNPNQLFSHGGFHGGNWRCAYEVDTIGETSVLIY 738
BLAST of mRNA_H-paniculata_contig142.2548.1 vs. uniprot
Match: A0A1Z5JSJ0_FISSO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSJ0_FISSO) HSP 1 Score: 460 bits (1184), Expect = 3.460e-146 Identity = 258/520 (49.62%), Postives = 331/520 (63.65%), Query Frame = 1 Query: 1 KFIMPPPMKEDFPPDGMIWPLVPNSRKEGDRSTMSANKRAFCAATRAVDCPLSLEMLNEKKWRKTYTRHAYNHVVTCLESKDAAVACAQAGLDWMHHNFDFV-KDGEEMSLAQAMTNVD-DSFFTGFVRGTKPRPTSTVLEVPYKGEILTGKRLHDQVDKWVSHGTIEPSAGEAIKDVSLNDSW--RDLSDKYFVLLGAGSAMGPLKFLLDLGANIIAIDLGRQHIWERLLSLAENSSGTMTFPIRVGRPQSGLKTMEELCEAAGANLLTQTPDILNWVKSICPDGPVVVGSYAYLDGELHVRLSLAMDAIVNGLIESRPDIIPAYLCTPTDIHVIPQAAHEAAQQQYSSLGFVNMLCRLTINGLGS-LAVNAKKPVVAKDGSTFYLVDGLVKKQGPNYALAKRLQHWRAVVSRHTHGCRVSSNIAPSTATASVVSNKLFALAYGGMKFFKPMEVFQQETSNAVMGALLLRDVCDPATPSNPSLPLKNPLQLFSYGSFHGGVWRMAYTMNSIGTPAVLAY 1545 +F PPP PP G+ WP+ K+G+RS+ N+ AA A+D L + L E+ WR Y +H V S +AA+ AQAGLD + F+FV DG+ +S +AM+ + + + TGFV+G + LEVPY G+ L+G+ L DQV WV +GTIEPSAGEAI N W + S +YFVLLGAGSAMGPLK LL LGAN+IA+DL R IW+ L+ LA+ S+GTMTFP++ +K + LCE AG NL T TP I +W+ + P VGSYAYLDG LHV++SLAMDAI L E R + AYLCTPTD+H+IP+ AH+AA L++ G G L N KKPV K G +YLV+G+ QGPNYALAKR+QHWRA+++R + GC VSSNIAPST+T SVV N+ FA AY GM +FKP E+ + S AVM ALL D+ DP++ +NP L NP QLFSYGSFHGG+WR AY ++SIG +VL Y Sbjct: 211 RFAKPPP-----PPRGLCWPVD----KKGERSSTEVNRAIVAAALSAMDESLGQKCLKERGWRFGYVKHLRAMVEAQCASPEAAIQSAQAGLDKAYELFEFVYPDGKAVSFKEAMSAKNSEKYHTGFVQG-EGSSKKDKLEVPYNGKQLSGQELKDQVQAWVDYGTIEPSAGEAIIKCVDNPKWFSEEFSKRYFVLLGAGSAMGPLKVLLALGANVIAVDLDRPGIWKHLIGLAKESTGTMTFPLKEDPATFDVKNEDALCERAGCNLFTNTPLIRDWLLDLYPGKSFTVGSYAYLDGALHVQVSLAMDAITRDLTEKRKNTSLAYLCTPTDLHLIPKEAHDAAAANLKEFSKKPYCMFLSLLGGGKFLRSNVKKPVSGKGGD-YYLVNGISVAQGPNYALAKRMQHWRAIIAR-SKGCIVSSNIAPSTSTVSVVHNRTFAWAYEGMPYFKPFEIATPDLSKAVMLALLAYDLNDPSSAANPKTALSNPNQLFSYGSFHGGLWRCAYEVDSIGEASVLLY 718
BLAST of mRNA_H-paniculata_contig142.2548.1 vs. uniprot
Match: A0A448ZLX2_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLX2_9STRA) HSP 1 Score: 456 bits (1173), Expect = 6.110e-146 Identity = 257/519 (49.52%), Postives = 338/519 (65.13%), Query Frame = 1 Query: 1 KFIMPPPMKEDFPPDGMIWPLVPNSRKEGDRSTMSANKRAFCAATRAVDCPLSLEMLNEKKWRKTYTRHAYNHVVTCLESKDAAVACAQAGLDWMHHNFDFVK-DGEEMSLAQAMTNVD-DSFFTGFVRGTKPRPTSTVLEVPYKGEILTGKRLHDQVDKWVSHGTIEPSAGEAIKDVSLNDSWRDLSDKYFVLLGAGSAMGPLKFLLDLGANIIAIDLGRQHIWERLLSLAENSSGTMTFPIRVGRPQSGLKTMEELCEAAGANLLTQTPDILNWVKSICPDGPVVVGSYAYLDGELHVRLSLAMDAIVNGLIESRPDIIPAYLCTPTDIHVIPQAAHEAAQQQYSSLG--FVNMLCRLTINGLGSLAVNAKKPVVAKDGSTFYLVDGLVKKQGPNYALAKRLQHWRAVVSRHTHGCRVSSNIAPSTATASVVSNKLFALAYGGMKFFKPMEVFQQETSNAVMGALLLRDVCDPATPSNPSLPLKNPLQLFSYGSFHGGVWRMAYTMNSIGTPAVLAY 1545 +F PPP PP G+++P+ + RS+ NK +A AV+ + ++ + K +R TY +H V +S +A + AQAGLD + F+FV DG +S+ +AM+ + + F TGF++G + T T++EVPYKG IL G+ L DQV KWV +GTIEPSAGEAI N +W DLSDKYFVLLGAGSAMGPL LL LGAN+IA+DL R +IW+RL+ LA+ S GT+TFP++ + QS L + + L AAG NL T TP I +W+ + P VGSYAYL+G LHV++SLAMDAI L E RP AYLCTPTD+H++P+ A +A+ + G + M RL +G L NAK PV A +G FY+++G+ QGPNY LAKR+QHWRAVV+R + GC VSSNIAP+T+T SV N+ FA AY GM +F+P E+F ETSNAVM A+L D+ P + NP L NP QLFS GSFHGG WR AY ++SIG +VL Y Sbjct: 108 RFARPPP-----PPRGIVFPVEEGKKS---RSSTPVNKEILASAVGAVNPSKAEKIRSAKGYRFTYVKHLTGLVEEQCKSPEACLKIAQAGLDKAYDIFEFVAPDGSAVSVREAMSMKNTEKFCTGFIKGEGAKDT-TMMEVPYKGTILKGQSLKDQVKKWVDYGTIEPSAGEAIIGCVDNPNWCDLSDKYFVLLGAGSAMGPLLVLLALGANVIAVDLDRPNIWKRLIGLAKKSPGTITFPLK--QEQSSLDSDDALYAAAGCNLFTHTPMIRDWLMDLYPGKSFTVGSYAYLNGALHVQVSLAMDAITRDLSEKRPGTSLAYLCTPTDLHLVPKEAWDASVSNFKEYGSRLLCMFVRLLSSGR-LLKKNAKAPV-AGEGGDFYMINGVSVAQGPNYILAKRMQHWRAVVAR-SKGCIVSSNIAPATSTVSVTQNRTFAWAYEGMPYFEPYEIFAPETSNAVMSAILFSDLNSPKSVGNPKTSLNNPNQLFSQGSFHGGNWRCAYEVDSIGETSVLIY 612 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig142.2548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig142.2548.1 >prot_H-paniculata_contig142.2548.1 ID=prot_H-paniculata_contig142.2548.1|Name=mRNA_H-paniculata_contig142.2548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=556bp MPPPMKEDFPPDGMIWPLVPNSRKEGDRSTMSANKRAFCAATRAVDCPLSback to top mRNA from alignment at H-paniculata_contig142:1752..8922- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig142.2548.1 ID=mRNA_H-paniculata_contig142.2548.1|Name=mRNA_H-paniculata_contig142.2548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7171bp|location=Sequence derived from alignment at H-paniculata_contig142:1752..8922- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig142:1752..8922- >mRNA_H-paniculata_contig142.2548.1 ID=mRNA_H-paniculata_contig142.2548.1|Name=mRNA_H-paniculata_contig142.2548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3336bp|location=Sequence derived from alignment at H-paniculata_contig142:1752..8922- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |