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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 2711 |
| Cds size | 2679 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1419.2543.1 >prot_H-paniculata_contig1419.2543.1 ID=prot_H-paniculata_contig1419.2543.1|Name=mRNA_H-paniculata_contig1419.2543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=893bp
MDPASLPKHRGRPGSLANCLGVKLDPDEQGQHSFNTMSTPEMAHQRKQVT
VAGEEAASFGDSPAISLVQQDNPRTKPSTTTTQSSTGSTSSCSDRDSSPD
IVSLRNTNSRSTGLSANSNSVRNNSPDTTAMTSEKAAAMSLPPDTNGGGS
RAAAAAANGGERKFTSSPAHGGSGVGFLKRSVREEERQSELSSSDEFNIS
SESERDDKRRKRRGKKRMRPEASAAYGAAAATAGAGDDSTDSDAPAYSTS
SSSSRLLFHSVAATSSLSDPTHATVGLGETARGGAPAARSSAPGSWQTRP
RLRIVSQTPAVAAADSPLYSPSSAAAFSPPAAPSPVPSLEVLDLSTPSPM
ATEVIDIDVEDSPPPVMPLPSSPAHDSGSKRFGGDVSPGRRVSSGCSSPG
TVVVQGQAQIAASPASSSRGAAAGAAPSASAAGRLAVNLDSSPPSPSAPR
ASTRGLSATLRPLGITGRPSYSSSPGAARRAERGEGDREGKNEGRTIGAV
RHSRQRQRQRQQQAAGRGGFMSGRSVALKEPRRLGTLGDGDRMAAALQES
ESRRQEQSDMQMALRLQSEENAEGRAVGWWQVPETVRTAARADAFESGGR
GYPGITNSNLDLDDPFWDDVQDEHAVDPLIDVGLDGEEDNETSSDGGVFM
VSGTTSTSLAGRSSGEGPSSSNSYRSIGGTSAVAAGGRGAAARSSSSRGG
GGSRRREDAAADVVDLGVAASDDDPTPLVVQGNGSESDRAAGSRASSRAR
GRGGRGVASVTGRRAALSRGSSNPTTAQTTSSTTSSSCSRRPRGARAGPG
AGGAGRGAYGHLGPGGRAVAAPAPAATERRSADVSASRAAVAAVPLSALG
SSTRRSNERNASMSARAAEARRHTQRFADELFLGVEQMGMMFL back to topmRNA from alignment at H-paniculata_contig1419:6662..9815- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1419.2543.1 ID=mRNA_H-paniculata_contig1419.2543.1|Name=mRNA_H-paniculata_contig1419.2543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3154bp|location=Sequence derived from alignment at H-paniculata_contig1419:6662..9815- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCCAAACACGCCATCCGTCGTCGGAAGAGATGGATCCCGCGTCTCTCCC
AAAACATCGAGGCCGCCCCGGCTCCCTTGCCAATTGTCTGGGAGTAAAAT
TAGACCCAGACGAACAGGGTCAACATTCATTCAACACCATGTCAACACCC
GAGATGGCGCATCAACGGAAGCAAGTTACTGTAGCAGGGGAGGAGGCCGC
CTCATTCGGAGACAGCCCAGCAATTTCGCTTGTTCAACAGGACAACCCTA
GGACCAAGCCGTCTACGACGACGACCCAGTCTTCCACAGGATCGACATCG
TCTTGCTCGGATCGAGATAGTAGTCCAGATATCGTGTCGTTACGCAACAC
CAATTCTCGTAGCACTGGCCTTAGTGCCAACAGCAACTCTGTACGAAACA
ACAGCCCTGACACAACAGCGATGACCTCCGAAAAAGCGGCTGCCATGTCG
TTGCCTCCAGATACCAACGGGGGCGGCAGCAGGGCAGCGGCGGCGGCGGC
CAATGGGGGCGAAAGAAAATTTACTAGTAGTCCTGCGCATGGTGGCAGTG
GTGTTGGTTTCCTGAAGAGATCCGTGCGAGAAGAGGAGCGACAGTCCGAG
TTATCCTCGTCGGACGAGTTCAACATAAGTTCAGAGAGTGAGAGAGACGA
TAAGAGACGAAAAAGGTGGGTATTCTGCTGTATGTGGAGCCTTGGTGGAG
CATATTTATCTTTTGTCCCGAGGAGTGCATGGGCGGCGGGCGAGATGTTT
GTTGTATCATATGTTCCAGTATGTGCTTTTCGCGGGGCAAAAATGCGACC
TCCATGTGTAATGGAGTCGCCGCGCATAGGCTGTGAAAGTCCCCCACAAA
CTGACGTCTGAAATCAATCTCCCCTCAGCCCACCCTTGGGTCTCTCCACG
TTGTGTTACTGATTTGTGATGTACCTACAAAAAGTATTTCATTCCGTTTG
TACTAACTTTCTGTAATATGAGTAGGAAGAAGCGTACGTAAAAAACGCCG
GAAAAGCAAACGTTTGGCTCGTGCAGCGTTGCAAGTTCTAACTTCGCAGA
GTTGTTTTCAGTCTGGAACTTCTATATGTGTAAATGTGTTGAATTTTTAA
CGAATGACAGGAGAGGAAAAAAGAGAATGCGTCCTGAAGCAAGCGCGGCA
TATGGCGCCGCCGCTGCTACTGCTGGCGCTGGCGACGATAGCACCGATAG
CGACGCTCCAGCTTATTCGACGAGCTCGTCGTCTTCGCGGCTCTTATTCC
ATTCCGTCGCCGCCACAAGCAGCCTATCGGACCCCACTCACGCCACAGTC
GGGTTAGGAGAAACAGCGCGCGGAGGGGCTCCAGCGGCGCGGAGTTCAGC
TCCTGGGTCGTGGCAAACACGTCCCAGGTTAAGGATTGTGAGCCAAACTC
CAGCGGTGGCGGCAGCGGACAGTCCCTTGTATTCTCCTTCGTCCGCCGCC
GCGTTCTCGCCGCCAGCGGCGCCTTCGCCTGTGCCTTCGCTGGAAGTGTT
GGACCTGTCCACCCCGTCGCCCATGGCGACCGAGGTCATTGACATTGACG
TGGAAGATAGCCCCCCGCCAGTGATGCCGCTGCCGTCCTCCCCTGCACAC
GATAGTGGTAGCAAGAGATTCGGCGGGGATGTGTCTCCTGGCCGGCGGGT
CAGCTCGGGCTGTTCTTCACCAGGTACTGTCGTTGTGCAGGGGCAGGCAC
AAATAGCTGCTTCCCCCGCGTCCAGCAGTAGAGGTGCCGCGGCCGGCGCT
GCTCCCTCTGCTTCCGCCGCGGGGCGTCTTGCGGTTAACTTGGATAGTAG
CCCGCCGTCCCCCAGCGCGCCCCGGGCCTCTACAAGGGGACTCAGCGCTA
CGCTTAGGCCTCTGGGTATCACCGGTCGGCCGTCGTACTCTAGTAGCCCC
GGCGCCGCTAGGCGCGCCGAGCGAGGAGAAGGAGATAGGGAGGGAAAAAA
CGAAGGTCGCACGATCGGTGCGGTTCGTCATAGTCGACAACGGCAACGGC
AACGGCAACAACAGGCGGCCGGCCGTGGCGGCTTCATGAGTGGACGCTCT
GTGGCATTGAAGGAGCCGCGGCGACTGGGGACGCTGGGTGATGGTGATCG
AATGGCAGCTGCATTGCAGGAGAGCGAGAGTCGGCGACAGGAGCAGAGCG
ATATGCAGATGGCGCTACGGTTGCAATCCGAGGAGAATGCAGAGGGACGT
GCGGTGGGGTGGTGGCAAGTCCCAGAAACGGTCAGGACGGCGGCGCGAGC
AGACGCCTTCGAAAGTGGGGGTAGAGGCTATCCGGGTATAACAAATTCGA
ATCTCGACCTGGACGACCCGTTTTGGGATGACGTGCAAGATGAGCATGCG
GTTGATCCGTTGATCGACGTGGGTTTAGATGGCGAAGAAGACAACGAGAC
TTCCAGTGACGGTGGTGTCTTTATGGTCTCAGGCACTACCAGTACCAGTC
TTGCTGGCAGAAGCAGCGGGGAGGGTCCGAGCAGCAGCAACAGCTACAGG
AGCATTGGCGGTACTTCTGCAGTAGCAGCAGGCGGCCGCGGCGCAGCTGC
AAGATCAAGCAGTTCTCGTGGCGGCGGTGGCAGTCGCAGACGAGAAGATG
CTGCAGCAGATGTGGTTGATCTCGGCGTGGCAGCGTCGGATGACGATCCG
ACTCCTTTGGTTGTGCAAGGTAATGGGAGCGAGAGCGATAGGGCTGCGGG
ATCGAGAGCATCTTCTAGGGCCAGAGGGAGAGGAGGAAGAGGAGTAGCAT
CAGTAACAGGTAGACGAGCAGCGTTATCACGGGGATCCTCCAACCCAACC
ACTGCCCAAACAACCAGCAGCACCACTAGTTCCAGCTGCAGCCGTCGTCC
GAGAGGAGCGCGTGCAGGCCCTGGTGCTGGTGGTGCCGGGCGAGGGGCAT
ATGGTCACCTTGGTCCAGGGGGCAGGGCAGTGGCGGCGCCAGCGCCAGCG
GCAACGGAAAGACGTAGCGCAGACGTGTCGGCGAGTCGTGCGGCCGTGGC
CGCCGTGCCCTTGTCAGCGCTTGGCTCTTCTACGCGACGAAGCAATGAGC
GTAATGCATCAATGTCCGCGAGGGCCGCGGAAGCGAGAAGACACACACAG
CGGTTTGCTGATGAGTTATTCCTTGGAGTTGAGCAGATGGGGATGATGTT
TCTC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1419:6662..9815- >mRNA_H-paniculata_contig1419.2543.1 ID=mRNA_H-paniculata_contig1419.2543.1|Name=mRNA_H-paniculata_contig1419.2543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5358bp|location=Sequence derived from alignment at H-paniculata_contig1419:6662..9815- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATCCCGCGTCTCTCCCAAAACATCGAGGCCGCCCCGGCTCCCTTGC
CAATTGTCTGGGAGTAAAATTAGACCCAGACGAACAGGGTCAACATTCAT
TCAACACCATGTCAACACCCGAGATGGCGCATCAACGGAAGCAAGTTACT
GTAGCAGGGGAGGAGGCCGCCTCATTCGGAGACAGCCCAGCAATTTCGCT
TGTTCAACAGGACAACCCTAGGACCAAGCCGTCTACGACGACGACCCAGT
CTTCCACAGGATCGACATCGTCTTGCTCGGATCGAGATAGTAGTCCAGAT
ATCGTGTCGTTACGCAACACCAATTCTCGTAGCACTGGCCTTAGTGCCAA
CAGCAACTCTGTACGAAACAACAGCCCTGACACAACAGCGATGACCTCCG
AAAAAGCGGCTGCCATGTCGTTGCCTCCAGATACCAACGGGGGCGGCAGC
AGGGCAGCGGCGGCGGCGGCCAATGGGGGCGAAAGAAAATTTACTAGTAG
TCCTGCGCATGGTGGCAGTGGTGTTGGTTTCCTGAAGAGATCCGTGCGAG
AAGAGGAGCGACAGTCCGAGTTATCCTCGTCGGACGAGTTCAACATAAGT
TCAGAGAGTGAGAGAGACGATAAGAGACGAAAAAGATGGATCCCGCGTCT
CTCCCAAAACATCGAGGCCGCCCCGGCTCCCTTGCCAATTGTCTGGGAGT
AAAATTAGACCCAGACGAACAGGGTCAACATTCATTCAACACCATGTCAA
CACCCGAGATGGCGCATCAACGGAAGCAAGTTACTGTAGCAGGGGAGGAG
GCCGCCTCATTCGGAGACAGCCCAGCAATTTCGCTTGTTCAACAGGACAA
CCCTAGGACCAAGCCGTCTACGACGACGACCCAGTCTTCCACAGGATCGA
CATCGTCTTGCTCGGATCGAGATAGTAGTCCAGATATCGTGTCGTTACGC
AACACCAATTCTCGTAGCACTGGCCTTAGTGCCAACAGCAACTCTGTACG
AAACAACAGCCCTGACACAACAGCGATGACCTCCGAAAAAGCGGCTGCCA
TGTCGTTGCCTCCAGATACCAACGGGGGCGGCAGCAGGGCAGCGGCGGCG
GCGGCCAATGGGGGCGAAAGAAAATTTACTAGTAGTCCTGCGCATGGTGG
CAGTGGTGTTGGTTTCCTGAAGAGATCCGTGCGAGAAGAGGAGCGACAGT
CCGAGTTATCCTCGTCGGACGAGTTCAACATAAGTTCAGAGAGTGAGAGA
GACGATAAGAGACGAAAAAGGAGAGGAAAAAAGAGAATGCGTCCTGAAGC
AAGCGCGGCATATGGCGCCGCCGCTGCTACTGCTGGCGCTGGCGACGATA
GCACCGATAGCGACGCTCCAGCTTATTCGACGAGCTCGTCGTCTTCGCGG
CTCTTATTCCATTCCGTCGCCGCCACAAGCAGCCTATCGGACCCCACTCA
CGCCACAGTCGGGTTAGGAGAAACAGCGCGCGGAGGGGCTCCAGCGGCGC
GGAGTTCAGCTCCTGGGTCGTGGCAAACACGTCCCAGGTTAAGGATTGTG
AGCCAAACTCCAGCGGTGGCGGCAGCGGACAGTCCCTTGTATTCTCCTTC
GTCCGCCGCCGCGTTCTCGCCGCCAGCGGCGCCTTCGCCTGTGCCTTCGC
TGGAAGTGTTGGACCTGTCCACCCCGTCGCCCATGGCGACCGAGGTCATT
GACATTGACGTGGAAGATAGCCCCCCGCCAGTGATGCCGCTGCCGTCCTC
CCCTGCACACGATAGTGGTAGCAAGAGATTCGGCGGGGATGTGTCTCCTG
GCCGGCGGGTCAGCTCGGGCTGTTCTTCACCAGGTACTGTCGTTGTGCAG
GGGCAGGCACAAATAGCTGCTTCCCCCGCGTCCAGCAGTAGAGGTGCCGC
GGCCGGCGCTGCTCCCTCTGCTTCCGCCGCGGGGCGTCTTGCGGTTAACT
TGGATAGTAGCCCGCCGTCCCCCAGCGCGCCCCGGGCCTCTACAAGGGGA
CTCAGCGCTACGCTTAGGCCTCTGGGTATCACCGGTCGGCCGTCGTACTC
TAGTAGCCCCGGCGCCGCTAGGCGCGCCGAGCGAGGAGAAGGAGATAGGG
AGGGAAAAAACGAAGGTCGCACGATCGGTGCGGTTCGTCATAGTCGACAA
CGGCAACGGCAACGGCAACAACAGGCGGCCGGCCGTGGCGGCTTCATGAG
TGGACGCTCTGTGGCATTGAAGGAGCCGCGGCGACTGGGGACGCTGGGTG
ATGGTGATCGAATGGCAGCTGCATTGCAGGAGAGCGAGAGTCGGCGACAG
GAGCAGAGCGATATGCAGATGGCGCTACGGTTGCAATCCGAGGAGAATGC
AGAGGGACGTGCGGTGGGGTGGTGGCAAGTCCCAGAAACGGTCAGGACGG
CGGCGCGAGCAGACGCCTTCGAAAGTGGGGGTAGAGGCTATCCGGGTATA
ACAAATTCGAATCTCGACCTGGACGACCCGTTTTGGGATGACGTGCAAGA
TGAGCATGCGGTTGATCCGTTGATCGACGTGGGTTTAGATGGCGAAGAAG
ACAACGAGACTTCCAGTGACGGTGGTGTCTTTATGGTCTCAGGCACTACC
AGTACCAGTCTTGCTGGCAGAAGCAGCGGGGAGGGTCCGAGCAGCAGCAA
CAGCTACAGGAGCATTGGCGGTACTTCTGCAGTAGCAGCAGGCGGCCGCG
GCGCAGCTGCAAGATCAAGCAGTTCTCGTGGCGGCGGTGGCAGTCGCAGA
CGAGAAGATGCTGCAGCAGATGTGGTTGATCTCGGCGTGGCAGCGTCGGA
TGACGATCCGACTCCTTTGGTTGTGCAAGGTAATGGGAGCGAGAGCGATA
GGGCTGCGGGATCGAGAGCATCTTCTAGGGCCAGAGGGAGAGGAGGAAGA
GGAGTAGCATCAGTAACAGGTAGACGAGCAGCGTTATCACGGGGATCCTC
CAACCCAACCACTGCCCAAACAACCAGCAGCACCACTAGTTCCAGCTGCA
GCCGTCGTCCGAGAGGAGCGCGTGCAGGCCCTGGTGCTGGTGGTGCCGGG
CGAGGGGCATATGGTCACCTTGGTCCAGGGGGCAGGGCAGTGGCGGCGCC
AGCGCCAGCGGCAACGGAAAGACGTAGCGCAGACGTGTCGGCGAGTCGTG
CGGCCGTGGCCGCCGTGCCCTTGTCAGCGCTTGGCTCTTCTACGCGACGA
AGCAATGAGCGTAATGCATCAATGTCCGCGAGGGCCGCGGAAGCGAGAAG
ACACACACAGCGGTTTGCTGATGAGTTATTCCTTGGAGTTGAGCAGATGG
GGATGATGTTTCTCGAGAGGAAAAAAGAGAATGCGTCCTGAAGCAAGCGC
GGCATATGGCGCCGCCGCTGCTACTGCTGGCGCTGGCGACGATAGCACCG
ATAGCGACGCTCCAGCTTATTCGACGAGCTCGTCGTCTTCGCGGCTCTTA
TTCCATTCCGTCGCCGCCACAAGCAGCCTATCGGACCCCACTCACGCCAC
AGTCGGGTTAGGAGAAACAGCGCGCGGAGGGGCTCCAGCGGCGCGGAGTT
CAGCTCCTGGGTCGTGGCAAACACGTCCCAGGTTAAGGATTGTGAGCCAA
ACTCCAGCGGTGGCGGCAGCGGACAGTCCCTTGTATTCTCCTTCGTCCGC
CGCCGCGTTCTCGCCGCCAGCGGCGCCTTCGCCTGTGCCTTCGCTGGAAG
TGTTGGACCTGTCCACCCCGTCGCCCATGGCGACCGAGGTCATTGACATT
GACGTGGAAGATAGCCCCCCGCCAGTGATGCCGCTGCCGTCCTCCCCTGC
ACACGATAGTGGTAGCAAGAGATTCGGCGGGGATGTGTCTCCTGGCCGGC
GGGTCAGCTCGGGCTGTTCTTCACCAGGTACTGTCGTTGTGCAGGGGCAG
GCACAAATAGCTGCTTCCCCCGCGTCCAGCAGTAGAGGTGCCGCGGCCGG
CGCTGCTCCCTCTGCTTCCGCCGCGGGGCGTCTTGCGGTTAACTTGGATA
GTAGCCCGCCGTCCCCCAGCGCGCCCCGGGCCTCTACAAGGGGACTCAGC
GCTACGCTTAGGCCTCTGGGTATCACCGGTCGGCCGTCGTACTCTAGTAG
CCCCGGCGCCGCTAGGCGCGCCGAGCGAGGAGAAGGAGATAGGGAGGGAA
AAAACGAAGGTCGCACGATCGGTGCGGTTCGTCATAGTCGACAACGGCAA
CGGCAACGGCAACAACAGGCGGCCGGCCGTGGCGGCTTCATGAGTGGACG
CTCTGTGGCATTGAAGGAGCCGCGGCGACTGGGGACGCTGGGTGATGGTG
ATCGAATGGCAGCTGCATTGCAGGAGAGCGAGAGTCGGCGACAGGAGCAG
AGCGATATGCAGATGGCGCTACGGTTGCAATCCGAGGAGAATGCAGAGGG
ACGTGCGGTGGGGTGGTGGCAAGTCCCAGAAACGGTCAGGACGGCGGCGC
GAGCAGACGCCTTCGAAAGTGGGGGTAGAGGCTATCCGGGTATAACAAAT
TCGAATCTCGACCTGGACGACCCGTTTTGGGATGACGTGCAAGATGAGCA
TGCGGTTGATCCGTTGATCGACGTGGGTTTAGATGGCGAAGAAGACAACG
AGACTTCCAGTGACGGTGGTGTCTTTATGGTCTCAGGCACTACCAGTACC
AGTCTTGCTGGCAGAAGCAGCGGGGAGGGTCCGAGCAGCAGCAACAGCTA
CAGGAGCATTGGCGGTACTTCTGCAGTAGCAGCAGGCGGCCGCGGCGCAG
CTGCAAGATCAAGCAGTTCTCGTGGCGGCGGTGGCAGTCGCAGACGAGAA
GATGCTGCAGCAGATGTGGTTGATCTCGGCGTGGCAGCGTCGGATGACGA
TCCGACTCCTTTGGTTGTGCAAGGTAATGGGAGCGAGAGCGATAGGGCTG
CGGGATCGAGAGCATCTTCTAGGGCCAGAGGGAGAGGAGGAAGAGGAGTA
GCATCAGTAACAGGTAGACGAGCAGCGTTATCACGGGGATCCTCCAACCC
AACCACTGCCCAAACAACCAGCAGCACCACTAGTTCCAGCTGCAGCCGTC
GTCCGAGAGGAGCGCGTGCAGGCCCTGGTGCTGGTGGTGCCGGGCGAGGG
GCATATGGTCACCTTGGTCCAGGGGGCAGGGCAGTGGCGGCGCCAGCGCC
AGCGGCAACGGAAAGACGTAGCGCAGACGTGTCGGCGAGTCGTGCGGCCG
TGGCCGCCGTGCCCTTGTCAGCGCTTGGCTCTTCTACGCGACGAAGCAAT
GAGCGTAATGCATCAATGTCCGCGAGGGCCGCGGAAGCGAGAAGACACAC
ACAGCGGTTTGCTGATGAGTTATTCCTTGGAGTTGAGCAGATGGGGATGA
TGTTTCTC back to top
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