mRNA_H-paniculata_contig14135.2521.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14135.2521.1
Unique NamemRNA_H-paniculata_contig14135.2521.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig14135.2521.1 vs. uniprot
Match: D7FTG6_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG6_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 6.190e-105
Identity = 169/246 (68.70%), Postives = 200/246 (81.30%), Query Frame = 1 
Query:    1 ATWKDVLMPTDRAIKAAMLLGVGLGFFQQASGSEAAVYYTPDVLKEHDWDQTMVLKGNMGVGGCKLLGEVVAFVLLDSRIGRRPLFLTSSVLVTICLVMVGTAFAQEWETLVVFFWLCMFMFTFSLGLGPVTFVVASEIFPVAVRGKAMSIVIFVNRFMSGIIASSFETLEDWISKPEAFYFFAILSFVSIAFYYFKVPETRGKTLEAIAADLGSVAPP---GSRNVGGGRGEARHVPLVNSEEEE 729
            ATW+DVL P+DR +KAAM+LG+GLGF+QQASGSEAAVYYTP+VLK+  W    +L+GNMGVGG KLLGEVVAF+LLD RIGRRPLFL SSVLVT+CL+MVG AF   W +++  FWLCMFMFTFSLGLGPVTFVVASEIFPVA+RGKAMS+VIFVNR MSG+IA S++++ + ++   +FYFFA LS +S+AFYYF VPETRG+TLE I ADLGS  PP   G R  G   G  RHVPL   +EEE
Sbjct:  343 ATWRDVLAPSDRTVKAAMVLGIGLGFWQQASGSEAAVYYTPEVLKDKGWANRAILRGNMGVGGFKLLGEVVAFMLLD-RIGRRPLFLVSSVLVTLCLLMVGFAFLLNWTSMLTLFWLCMFMFTFSLGLGPVTFVVASEIFPVAIRGKAMSVVIFVNRMMSGVIALSYQSMSEAMTPEGSFYFFAALSAISVAFYYFWVPETRGRTLEEITADLGSSLPPTVPGPR-AGPANGGPRHVPLARDDEEE 586
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BLAST of mRNA_H-paniculata_contig14135.2521.1 vs. uniprot
Match: A0A835Z5D9_9STRA (General substrate transporter (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5D9_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.950e-71
Identity = 126/204 (61.76%), Postives = 152/204 (74.51%), Query Frame = 1 
Query:    1 ATWKDVLMPTDRAIKAAMLLGVGLGFFQQASGSEAAVYYTPDVLKEHDWDQTMVLKGNMGVGGCKLLGEVVAFVLLDSRIGRRPLFLTSSVLVTICLVMVGTAFAQEWETLVVFFWLCMFMFTFSLGLGPVTFVVASEIFPVAVRGKAMSIVIFVNRFMSGIIASSFETLEDWISKPEAFYFFAILSFVSIAFYYFKVPETRGK 612
            A WKDVL P+DRAI AA+ +G+GLGF+QQASGSEAAVYY+P+VLK   WD   +L GNM VG  KL GEVVAF LLD R+GRRPL L SS+  T+CL+ +  AF  +W    V F L  FM  FSLGLGPVTFVVASEIFP+AVRGKAMS+V+F+NR MSGIIA S+  L   ++   +F  FA LS +S+ FYY+KVPET G+
Sbjct:  236 ARWKDVLCPSDRAIAAAVSIGLGLGFWQQASGSEAAVYYSPEVLKHSGWDGRDLLLGNMAVGTFKLAGEVVAFFLLD-RVGRRPLLLVSSITSTLCLMAIALAFHLQWGGGAVLFLLSSFMLCFSLGLGPVTFVVASEIFPLAVRGKAMSLVVFINRAMSGIIALSYTALATALAPSGSFLMFAALSGISVLFYYWKVPETNGE 438
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BLAST of mRNA_H-paniculata_contig14135.2521.1 vs. uniprot
Match: D8LJ49_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ49_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 6.830e-63
Identity = 114/212 (53.77%), Postives = 157/212 (74.06%), Query Frame = 1 
Query:    7 WKDVLMPTDRAIKAAMLLGVGLGFFQQASGSEAAVYYTPDVLKEHDW-DQTMVLKGNMGVGGCKLLGEVVAFVLLDSRIGRRPLFLTSSVLVTICLVMVGTAFAQEWETLVVFFWLCMFMFTFSLGLGPVTFVVASEIFPVAVRGKAMSIVIFVNRFMSGIIASSFETLEDWISKPEAFYFFAILSFVSIAFYYFKVPETRGKTLEAIAADL 639
            W +VL P+D+ + AA+ +G+GLGF+QQASGSEAAVYY+P VL+      + ++L G   VG  KLLGEV+A VL++ R+GRRPLFL SS+  T+ L+++  +F  EW  +     LC FMF FS+GLGP+TFVVA+E+FP+ VRGKA+S+V+FVNR +SG+IA+SF ++   ++   AF  FA++S  S+ FYYF VPET+GKTLE IA DL
Sbjct:  332 WMEVLWPSDKVVGAALFVGLGLGFWQQASGSEAAVYYSPHVLEAAGMTSRGLLLAGTCMVGVFKLLGEVLAAVLIE-RVGRRPLFLLSSITSTLTLLLIAQSFFLEWSAIPTLVVLCAFMFCFSIGLGPLTFVVAAEVFPMQVRGKAVSLVVFVNRLLSGLIATSFLSISQALTPGGAFLMFALISLASVFFYYFCVPETQGKTLEQIADDL 542
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BLAST of mRNA_H-paniculata_contig14135.2521.1 vs. uniprot
Match: A0A4D9D9C2_9STRA (MFS domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9C2_9STRA)

HSP 1 Score: 186 bits (472), Expect = 4.030e-52
Identity = 101/209 (48.33%), Postives = 142/209 (67.94%), Query Frame = 1 
Query:    7 WKDVLMPTDRAIKAAMLLGVGLGFFQQASGSEAAVYYTPDVLKEHDWDQTMVLK-GNMGVGGCKLLGEVVAFVLLDSRIGRRPLFLTSSVLVTICLVMVGTAFAQEWETLVVFFWLCMFMFTFSLGLGPVTFVVASEIFPVAVRGKAMSIVIFVNRFMSGIIASSFETLEDWISKPEAFYFFAILSFVSIAFYYFKVPETRGKTLEAIA 630
            W +VL P  RAI   +L+G+ LGFFQQ+SGSEAAVYY+P +L E     T     GN+ +  CK  GE+VA + +D R+GR+PLF++S++     LV+ G +F       ++   LC+FM  FS+G+G +TFVVASEIFP+ VRGKAM++ +FVNR +SGI+A +F +L D ++    FY FA++SF+S  FY   +PET GKTLE I+
Sbjct:  256 WSEVLCPRHRAILLPVLMGLALGFFQQSSGSEAAVYYSPQILAEAGMSSTAHQSLGNIAICLCKFAGEIVAMLSMD-RVGRKPLFVSSALGSGFFLVLAGASFQYSLPPSLLMTSLCLFMAFFSVGMGAITFVVASEIFPLPVRGKAMALAVFVNRLLSGIVALTFLSLVDAVTYANTFYLFAVISFISTIFYAGFLPETMGKTLEEIS 463
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BLAST of mRNA_H-paniculata_contig14135.2521.1 vs. uniprot
Match: A0A6H5K3W8_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3W8_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 9.470e-48
Identity = 104/224 (46.43%), Postives = 145/224 (64.73%), Query Frame = 1 
Query:    1 ATWKDVLMPTDRAIKAAMLLGVGLGFFQQASGSEAAVYYTPDVLKEHDW-DQTMVLKGNMGVGGCKLLGEVVAFVLLDSRIGRRPLFLTSSVLVTICLVMVGTAF---AQEWETLVVFFWLCMFMFTFSLGLGPVTFVVASEIFPVAVRGKAMSIVIFVNRFMSGIIASSFETLEDWISKPEAFYFFAILSFVSIAFYYFKVPETRGKTLEAIAADLGSVAPPG 660
            ++W +++     A+K+ +LLG+GLG  QQASGSEAAVYY+P VL +      +  L GN+ VG  KL GEV A+ L+D R GRRPLF+ SS LVT  LV +G  F   A  W TL     LC+FM++FSLG+G +TF+VA+EIFP+  RG+ +S+ + VNR  SG++A +F  LE   +    F+ F+I S  ++ FYY K+PET+ +TLE I+A     A  G
Sbjct:  295 SSWSELVCTASPALKSTVLLGLGLGIAQQASGSEAAVYYSPSVLSDAGLKSDSAELGGNILVGLFKLGGEVFAYFLVD-RTGRRPLFIASSSLVTFFLVFLGLTFSASAPAWMTLS---GLCLFMWSFSLGMGALTFLVAAEIFPLRYRGRGVSLTVCVNRLTSGLVALAFPLLERGFTAGGTFFLFSIFSVGTVWFYYTKIPETKDRTLEEISAGAAKEASEG 514
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BLAST of mRNA_H-paniculata_contig14135.2521.1 vs. uniprot
Match: A0A7S2XV01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV01_9STRA)

HSP 1 Score: 161 bits (407), Expect = 6.270e-45
Identity = 96/210 (45.71%), Postives = 133/210 (63.33%), Query Frame = 1 
Query:    1 ATWKDVLMPTDRAIKAAMLLGVGLGFFQQASGSEAAVYYTPDVLKEHDW-DQTMVLKGNMGVGGCKLLGEVVAFVLLDSRIGRRPLFLTSSVLVTICLVMVGTAFAQEWETLVVFFWLCMFMFTFSLGLGPVTFVVASEIFPVAVRGKAMSIVIFVNRFMSGIIASSFETLEDWISKPEAFYFFAILSFVSIAFYYFKVPETRGKTLEAI 627
            A+W+++L   D   K  +LL + LGF+QQA+GSEA VYYTP VL++      +M+L G   VG  KLLGEVV   L++  +GRR L   SSVLVT+ LV +   FA         F LC +M+ FS+GLGPVT+V  SE+ P  ++ K+MS+ +F NR  SGI A SF +L++      A+  +A +S +++ FY+  VPETRGKTLE I
Sbjct:   67 ASWEEMLHLPDWPSKRVVLLTIALGFWQQATGSEAVVYYTPVVLRDAGMGSSSMLLLGTTLVGIAKLLGEVVCAYLVEG-VGRRRLLNLSSVLVTVSLVAISITFALSKNAYANIFLLCNYMWWFSIGLGPVTWVCMSELLPTRLKAKSMSLGVFANRLTSGICALSFLSLQEAAGLSGAYGLYACISVIALGFYFKAVPETRGKTLEEI 275
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BLAST of mRNA_H-paniculata_contig14135.2521.1 vs. uniprot
Match: A0A7R9Y9S9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9S9_9STRA)

HSP 1 Score: 159 bits (401), Expect = 4.150e-42
Identity = 85/219 (38.81%), Postives = 137/219 (62.56%), Query Frame = 1 
Query:    1 ATWKDVLMPTDRAIKAAMLLGVGLGFFQQASGSEAAVYYTPDVLKEHDWD-QTMVLKGNMGVGGCKLLGEVVAFVLLDSRIGRRPLFLTSSVLVTICLVMVGTAFAQEWETLVVFFWLCMFMFTFSLGLGPVTFVVASEIFPVAVRGKAMSIVIFVNRFMSGIIASSFETLEDWISKPEAFYFFAILSFVSIAFYYFKVPETRGKTLEAIAADLGSVAP 654
            A+W D+LMP  R ++ A+ + +GL F+QQA+GSEA +YY+   L++     ++  L GNMG+G CKL+ E V+ + +D ++GR    + S+V +T+ + ++G A+ Q+W  + V F LC FM +FS+ +GP T+VV SE+ P+ +R K   + IF+NR  SG +A +  +  D +     F+ +  +S +SI FY+  VPET GK+LE   A L  + P
Sbjct:  257 ASWSDILMPRTRLMQRALFIVLGLSFWQQATGSEAVLYYSATFLEKAGLQSKSQRLLGNMGLGVCKLIPEAVSLIYVD-KLGRVKPLILSAVAMTVLIFLIGFAYVQDWSGMTVVFLLCGFMLSFSIAIGPFTWVVVSEVLPLQMRAKGTMLGIFLNRLTSGTVALTALSTADSLGPSTFFFLYTAVSAISIMFYWRCVPETAGKSLEETEAMLAEMPP 474
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BLAST of mRNA_H-paniculata_contig14135.2521.1 vs. uniprot
Match: A0A6A7G7L9_9CRUS (Polyol transporter 4 n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G7L9_9CRUS)

HSP 1 Score: 152 bits (384), Expect = 1.790e-39
Identity = 86/212 (40.57%), Postives = 136/212 (64.15%), Query Frame = 1 
Query:    7 WKDVLMPTDRAIKAAMLLGVGLGFFQQASGSEAAVYYTPDVLKEHDWD-QTMVLKGNMGVGGCKLLGEVVAFVLLDSRIGRRPLFLTSSVLVTICLVMVGTAFAQEWETLVVFFWLCMFMFTFSLGLGPVTFVVASEIFPVAVRGKAMSIVIFVNRFMSGIIASSFETLEDWISKPEAFYFFAILSFVSIAFYYFKVPETRGKTLEAIAADL 639
            W D+L PT  A+K  ++ GVG  FFQQASGSEAAVYYTP +L E   + +   + G + VG  K    ++A +LLD +IGRRP+ +TS+++V I L ++G +F        +   +C++M  F +GLGPV +++ +EIFP+ +RG+AM+I   VNR +SG +A +F +L + IS+  AF+ ++ ++F ++ F    +PET  KTLE +  + 
Sbjct:  265 WMDLLRPTP-AVKLMLIAGVGAAFFQQASGSEAAVYYTPKILAEAGIEGERNAIAGAIVVGAFKTTTLIIASLLLD-KIGRRPMMITSTIVVMIALSLLGMSFMINAPPFAMIGGMCLYMIGFGIGLGPVGWLLIAEIFPLQLRGRAMAIGTAVNRLVSGTVALTFLSLSESISQAGAFFMYSGIAFCALIFSIVFIPETTNKTLEELIVEF 474
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BLAST of mRNA_H-paniculata_contig14135.2521.1 vs. uniprot
Match: A9V0M3_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V0M3_MONBE)

HSP 1 Score: 149 bits (377), Expect = 6.570e-39
Identity = 92/218 (42.20%), Postives = 132/218 (60.55%), Query Frame = 1 
Query:    4 TWKDVLMPTDRAIKAAMLLGVGLGFFQQASGSEAAVYYTPDVLK-------EHDWDQTMVLKGNMGVGGCKLLGEVVAFVLLDSRIGRRPLFLTSSVLVTICLVMVGTAFAQEWETLVVFFWLCMFMFTFSLGLGPVTFVVASEIFPVAVRGKAMSIVIFVNRFMSGIIASSFETLEDWISKPEAFYFFAILSFVSIAFYYFKVPETRGKTLEAIAAD 636
            +W+D+L P+ R  +  +L GVG+ FFQQASG EA +YY P+ L        EH   Q ++   NM VGG KLL  ++A    D + GRR L + S V + +  ++V  +F       +    + +FM TFS G GP+T+VV+SEIFP+ VRG A+ +  FVNR +SGII S++ ++   ++   +F+ FA LS +S+AF  F VPET GKTLE I  D
Sbjct:  223 SWRDLLSPSMRGARWLILAGVGVAFFQQASGLEALLYYVPETLAHAGITSLEH---QLLI---NMAVGGVKLLSVLIAMCFTD-KYGRRTLLMGSGVGIMLSCLLVAISFEAGDILGLTLLGIFLFMATFSFGFGPLTWVVSSEIFPLQVRGPALGLATFVNRVVSGIITSTYLSMAQGLTPAGSFFLFAGLSLLSVAFVKFVVPETGGKTLEDIERD 433
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BLAST of mRNA_H-paniculata_contig14135.2521.1 vs. uniprot
Match: C1N7I8_MICPC (Major facilitator superfamily n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N7I8_MICPC)

HSP 1 Score: 143 bits (360), Expect = 2.150e-36
Identity = 94/218 (43.12%), Postives = 128/218 (58.72%), Query Frame = 1 
Query:   28 TDRAIKAAMLLGVGLGFFQQASGSEAAVYYTPDVL------KEHDWDQTMVLKGNMGVGGCKLLGEVVAFVLLDSRIGRRPLFLTSSVLVTICLVMVGTAFAQ----EWETLVVFFWLCMFMFTFSLGLGPVTFVVASEIFPVAVRGKAMSIVIFVNRFMSGIIASSFETLEDWISKPEAFYFFAILSFVSIAFYYFKVPETRGKTLEAIAADLGSVA 651
            +DR+ + A  +G    FFQQA+GSEAAVYY P VL       EH   Q   L     VG CK +  V+   L+D++ GRRP+ L+S V VT CL+ +     +      +  V  F LC FM +FSLG+GPVT+VV SEIFP+  R K  ++ + VNR  SG +A +F +L D++    AF FF+ +S    AF +  +PET+GK+LE I A LGS A
Sbjct:  234 SDRSARTATRIGACTAFFQQANGSEAAVYYVPQVLAAAGVASEHAQLQAAAL-----VGVCKTVFVVIGQQLVDAQ-GRRPMLLSSIVAVTACLITLAFCLGELAGGGVDAGVTLFALCAFMASFSLGMGPVTWVVVSEIFPLEHRAKGTAVSMAVNRLTSGTVAMTFLSLSDFVGVGGAFLFFSGVSATHFAFTFRYLPETKGKSLEEIEASLGSGA 445
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14135.2521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTG6_ECTSI6.190e-10568.70MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z5D9_9STRA1.950e-7161.76General substrate transporter (Fragment) n=1 Tax=T... [more]
D8LJ49_ECTSI6.830e-6353.77MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A4D9D9C2_9STRA4.030e-5248.33MFS domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A6H5K3W8_9PHAE9.470e-4846.43MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2XV01_9STRA6.270e-4545.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9Y9S9_9STRA4.150e-4238.81Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A6A7G7L9_9CRUS1.790e-3940.57Polyol transporter 4 n=1 Tax=Hirondellea gigas Tax... [more]
A9V0M3_MONBE6.570e-3942.20Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
C1N7I8_MICPC2.150e-3643.12Major facilitator superfamily n=1 Tax=Micromonas p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14135contigH-paniculata_contig14135:1515..6381 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score312.4
Seed ortholog evalue1.9e-82
Seed eggNOG ortholog2880.D7FTG6
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.glucose import
EggNOG OGsKOG0254@1,KOG0254@2759
Ec32 ortholog descriptionMajor facilitator superfamily domain
Ec32 orthologEc-21_001300.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size741
Cds size720
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929124.9405735-CDS-H-paniculata_contig14135:1514..16641622929124.9405735-CDS-H-paniculata_contig14135:1514..1664Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 1515..1664 -
1691480740.566225-CDS-H-paniculata_contig14135:1514..16641691480740.566225-CDS-H-paniculata_contig14135:1514..1664Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 1515..1664 -
1622929124.976302-CDS-H-paniculata_contig14135:2309..24861622929124.976302-CDS-H-paniculata_contig14135:2309..2486Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 2310..2486 -
1691480740.5815265-CDS-H-paniculata_contig14135:2309..24861691480740.5815265-CDS-H-paniculata_contig14135:2309..2486Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 2310..2486 -
1622929124.9947789-CDS-H-paniculata_contig14135:3050..32311622929124.9947789-CDS-H-paniculata_contig14135:3050..3231Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 3051..3231 -
1691480740.5907123-CDS-H-paniculata_contig14135:3050..32311691480740.5907123-CDS-H-paniculata_contig14135:3050..3231Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 3051..3231 -
1622929125.0121355-CDS-H-paniculata_contig14135:4447..45371622929125.0121355-CDS-H-paniculata_contig14135:4447..4537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 4448..4537 -
1691480740.6012385-CDS-H-paniculata_contig14135:4447..45371691480740.6012385-CDS-H-paniculata_contig14135:4447..4537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 4448..4537 -
1622929125.0276294-CDS-H-paniculata_contig14135:5100..51411622929125.0276294-CDS-H-paniculata_contig14135:5100..5141Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 5101..5141 -
1691480740.6098158-CDS-H-paniculata_contig14135:5100..51411691480740.6098158-CDS-H-paniculata_contig14135:5100..5141Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 5101..5141 -
1622929125.0464277-CDS-H-paniculata_contig14135:6279..63601622929125.0464277-CDS-H-paniculata_contig14135:6279..6360Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 6280..6360 -
1691480740.618477-CDS-H-paniculata_contig14135:6279..63601691480740.618477-CDS-H-paniculata_contig14135:6279..6360Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14135 6280..6360 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929125.0633037-UTR-H-paniculata_contig14135:6360..63811622929125.0633037-UTR-H-paniculata_contig14135:6360..6381Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14135 6361..6381 -
1691480740.627446-UTR-H-paniculata_contig14135:6360..63811691480740.627446-UTR-H-paniculata_contig14135:6360..6381Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14135 6361..6381 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14135.2521.1prot_H-paniculata_contig14135.2521.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14135 1515..6360 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14135.2521.1

>prot_H-paniculata_contig14135.2521.1 ID=prot_H-paniculata_contig14135.2521.1|Name=mRNA_H-paniculata_contig14135.2521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=240bp
MPTDRAIKAAMLLGVGLGFFQQASGSEAAVYYTPDVLKEHDWDQTMVLKG
NMGVGGCKLLGEVVAFVLLDSRIGRRPLFLTSSVLVTICLVMVGTAFAQE
WETLVVFFWLCMFMFTFSLGLGPVTFVVASEIFPVAVRGKAMSIVIFVNR
FMSGIIASSFETLEDWISKPEAFYFFAILSFVSIAFYYFKVPETRGKTLE
AIAADLGSVAPPGSRNVGGGRGEARHVPLVNSEEEEELE*
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mRNA from alignment at H-paniculata_contig14135:1515..6381-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14135.2521.1 ID=mRNA_H-paniculata_contig14135.2521.1|Name=mRNA_H-paniculata_contig14135.2521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4867bp|location=Sequence derived from alignment at H-paniculata_contig14135:1515..6381- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCACGTGGAAAGATGTGTTGATGCCGACGGACAGGGCCATAAAAGCGGC
CATGCTGCTCGGTGTGGGGCTCGGTTTTTTCCAGCAGGCCAGCGGCAGCG
AGGTGTGTGTGGGTGTGTGTGTTTGTGGGCGTGTGTGTTTGTGGGCGTGT
GTTTGTGGGTGTATGCAGCAATACATGCCGATGGAAGTAGCCATACCGCC
CGTTTATTTTTCAGCTACTTCTCCGAACAAAGATAAGAAGTTGAACTTGT
ACTTTGCTTCGCAAGTTTTATCTGTGCCAGACTGAAGAGATTGCGAAATT
GCTGATCGACTACATTATCGAGGTGTGTGATTGTGTGTGTATTCACAGTA
AGTGGTGACGGTGTGCACAGGTAACTCACTCGAAGAGAGTGGATGAGTCG
GTGGGTCAGTGGGTTGTTGTATCTGGCGGGGACGTTGTCCAACGTTTGTG
TGTGGTGACAAGTTGGGAGTTGACTCTCATTTTTGTAGTGCCGTTCATCG
TTGTGTGAAGTTTATGAGAATATTGGCAACGCTGTGCAGACCAGAAATAG
GGGGAAGACCAGGGTTCTCATCACCAATATCCCGATATATCGCCGTTCTA
ATCTATTAAATGGCTACTGAGTGATGGGGACAATCGCTATATAGAAATAT
CTGTGTTTTACTCACATATTGGTCGTTTTTCACTAAAGGTGCAGATATTA
TAGTCACAACCTAACATCTGACAGTAAATATGTACACCCGCCCTGGATTT
ATTTCTCGATTTTGAAGAAACAGGAAGCTAAAAAGTGTTTTGTTTCTGCC
TCTGGTGGCCTTCCCGACGAGGAACCCTCGCGAGCCCGGGGGGAGGTGTT
GGGGCTTGCGGGTTCGCCGCTCGCCTGTTCGTTCTAACGCAGTCGCTTTC
ATGCACAGGGATAAACGGTTTGACCTCAAAGATAAGACCCGTCCTGGCAA
TTTGGGGGTACCCCGTATAACAGGACGTTTTTTTTGCTGTGAAAAAGTCC
CATGATCCCTTATAGCACTTACTTGAGCAAAGCAATGCTCGAAAAGAGGA
CGACAAAGGCGATGATGACCAATCGCCTCTGAACAATCAGTTTTCCCTCG
GTATAAGTGAAACATGAGCCTGGCAGCGCTGACATTCATGTTCTTGATTT
CTTGTTTGTTTTTGTTTCTTTTTGCTTGTTTTTTGCGTTTGCCGTCATCG
GCGCGGTTTCGACAATTCCCATCGAATCATTTGTGTACAGGCGGCCGTGT
ACTATACACCAGACGTGCTGAAGGAACACGAGTAAGTGGCGTTTGTTTGT
TTTTTTCTTGTATGCGCTGTGCTGGTGTCCACTTCGCGCGGTCGAGCCCC
TCATCTCCGAGTTGGCTTGTCTGCTGTCAAAATTGGTTATCTTACAGATG
TTTGGCTTGCATGCTTCTGGGAAATGTGAGGTCAAAATGCACACGAATGT
TAGTTAATCGCGATGTCTGATGAGAATTGCCATCGCAATACAACTCGCCA
GTCTTGCGATATGCTGGTTTCCGCTATTTGTGTTCAGTTTGTTTTTGGAA
CAATATGGTGTGCTTACTGGCGAGTGTAGCAAGCCACCTTCGAGCACAGT
GAGCCGTGGTTTGTCGCCGGTGGATTTTGACAAAATTCGAAAAAAGGCAG
ACGCTATACTATAGTACACCAGTTTCATTTACCTGCCGCTTCCCATCACC
CACTACTGTCGTTGGATCAGGAGTGGGCATGGTGTCCCAAATTTTCGGTC
TGTAGTGGTACCCCAAGTTGTGCAGTTCTGCTTCGTAACTGCTGTATTGC
CAACCCCCCTCGCGTGTATCCCCCTACCCCACTCGATCCCGTAGCTGGGA
CCAAACGATGGTGCTTAAGGGCAACATGGGTGTCGGAGGCTGTAAACTGC
TGGGAGAAGTGGTCGCATTTGTTCTCTTGGACAGGTTAGTGGTGATAGTG
GAGTAGGGCTATGGTAAGGCGGGGAGGGGGTGGGGGGGTGGCTTGTTTAA
CGAGCGCCGATTCGCAAATTGGCTAGAAAACAAACTTAAACCAAAGCCTT
TCTAATGGTATGCGTTAACGCCTCCCCAAGCGTGCGTACTGTTGAAGAGG
AGAACATATTTTGCTTAGCCCCTTTGCAAATCGACTCAAATTCCCTACCC
CACCACCACCATAGCCTGATTCATTGGTGGCGTGTGTTCGATGCTTCAGG
CTTAGGGCAGGGCACACCTCTCCTGTAGGTTGCCCAGCGCACATAGACGT
TGTATGGAGATGTTGCAGATATGGTGAAAGGGGTACATTGGTATTTCACG
AGGAACTGAGAATGCGTGGGTCGCCTGACATACGGAAAGCATCCGATACA
CATAATACGTCATACTTCAATGAGCACTTAGGCAATAACAATCCTGGTTT
ACCTGCAACCACATTGGACCACCCTCGTTGTACCTGGAAGCACTAAAATG
AGCGTAGTGGTGATACCGTAACGTGAAGAACGATGGCCCTGTATTCGAGT
GATGCAACCATTGACGGGTGTGTGTGTGTGAAATGCATCAATTGTCAAGC
ACGTTCCACGGAACGTCCCCCGGGGTGCGGCTTTGCAGCATCCACGGCAC
AGGTTTGTGTCGGTTTTATTGTACCATATAACATTTGGCCAGGGTGTTCT
CGTACAACGTTGGATAGGGGATAGTACAGGAATGTCGCTTGGGAGGGGAT
GTTTCCCCTCCCCGATCCAACTCTTGGATCGTTCCATAACTTGGTCATGT
AACTGTTGTTGTTGTACAATATGATGATGCAGAAACGGTGGAGCGCCGAG
CGTTTTCGGCGCCGTCTATTTTTTGCCAATTGGGATGAAAATTGAAGTCA
CTTGAAGATCGGAGAACATACAAACATGCAAACCTCGTTCCAAGATTTTT
CAATCATTGTGTCAAACAGAAGCCGCACTCACCAAAATCAATCGCTACCG
AACAAATTGTTTTTTTTCTGCGAACATAGTCATTATCCACAGTTAGTGTG
CTTGAGCATGATATGGTTGTCACGTTCAAAATCAACATATCTTGTAGGTG
TACCGTAAACGTCTTATTTTTTGTTTTTCTCTGTTCCGCCTCAAGTGATT
TATGTGACCCCCCTCACACAATCATGAAACACGCCTCCGCCAAAACGGAG
CAGGATTGGGAGACGTCCGTTGTTCTTGACGAGCTCGGTGCTGGTGACCA
TCTGCCTGGTCATGGTTGGGACGGCATTTGCTCAAGAGTGGGAAACCCTG
GTGGTGTTCTTTTGGCTGTGTATGTTCATGTTCACCTTCTCTCTTGGACT
TGGGCCCGTAACGTTTGTCGTGGCCTCTGAGGTGCGTGGAGAGGCGTTTG
CAGGGTAGGGGGTAATCAGATGGGGGGGGGGGGGTTCACTGGATCTAAAA
TGCTCATGTACTCACTGCATCGTACCCACGTTGAAATTATGCAGCTGACC
TGAAATACTAGTTGTGTAGACCTAATGGCAAATTTTGATCGAATAAAGAC
TCAGTAATTAGTTCGCCTCTTTTGTCGCTTGTCATAATCTAAACGTACAT
GGCGAGGTTGTTTAGCCTGCAGTAAGTCTGGGCCAGATTTAGGAACACCA
TCAGGAAAAGTTGAGCAACTACCTATTATGGGATATACGAAGATTATGGG
AACAGAAAAGAATACGCGTATATCCGCATGAGAACCCCGAGAAGTAGTCA
ATCCGCGTAGTCATATGTCATAATCTATCTGCGGAGGACTTGTTGCCCTT
AGGGGGGGACTTTCGCTTGCTGAACTGTTACATAAGTACAGTGATACATT
TCCCCCCACTCTTGACTGATGCGAAATCTTGCCATGATTGCATCCGCTGC
TGGCTGTATTTTTTGGCCTCGGTTGTTGTTCTTTGTGTCGGGTAGATCTT
CCCCGTGGCCGTGAGGGGTAAAGCAATGTCAATCGTGATCTTCGTGAATC
GGTTCATGAGTGGCATCATCGCGTCTTCATTCGAGACGTTGGAGGACTGG
ATTTCCAAGCCGGAGGCGTTCTACTTTTTCGCCATACTGTCGTTCGTGTC
GATTGCGTTTTATTATTTTAAGGTAAGACGGCCATCTACGTATTTCGTGT
TGTTTTGATAAATATATATATATATATATATATATTATTTCACTTCAAAT
TGCTCCTAGCAATGATCCGTGTCGCTTGTTTTCGGAGGGTAGTCGTGAAA
CATATATGTCGCGCGTAGCCTACTGTTCTGGACTCTGTGGTATTGTATAG
AACTAATAAAACACCAAGATCTGAGCATTTTTGTTTCCGAACGTTCACGA
ACACACATCGATGTTTTAACTGGCCTCCCGAATATTATTGCAGATTTGAC
CGAATTCCTCAGACGTTGTAATCGCCAGTATTGCTAGATGTGTCTTAAAC
CCTGAAACAATCGGACTTCGTATCGGCCGAAATTGAGATTTACTAATGAA
CAGTAGTGAATAGTGACTAGTACGTCGACATAATACCTTAACAGGCTCTT
TAAGCTGGTCAGTGTATCTCAGGTGCAAACGGGGGTCAATTTTTGCTGTT
TTGGGGGAGAACGGGCAAACGTTGGCTTTTCGTAACGGCCAGATTATAAA
CAAGCAAGCACTCCACAGCTGATTACGGACTCAGCAGTTCCCGAAGGAGT
AGCTCAGGGTATCTGAAAGCACATGCTCCGCATTTCGCCCTTGATTGCTC
ACAAAAAAACGCAACAGGTGCCAGAAACTCGCGGTAAAACGTTGGAAGCA
ATCGCCGCAGATCTTGGCTCTGTAGCACCACCAGGCTCGAGGAATGTAGG
TGGCGGCAGGGGGGAGGCACGCCATGTGCCCTTGGTGAATAGCGAAGAAG
AGGAGGAGCTGGAATAA
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Coding sequence (CDS) from alignment at H-paniculata_contig14135:1515..6381-

>mRNA_H-paniculata_contig14135.2521.1 ID=mRNA_H-paniculata_contig14135.2521.1|Name=mRNA_H-paniculata_contig14135.2521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1440bp|location=Sequence derived from alignment at H-paniculata_contig14135:1515..6381- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGACGGACAGGGCCATAAAAGCGGCCATGCTGCTCGGTGTGGGGCT
CGGTTTTTTCCAGCAGGCCAGCGGCAGCGAGATGCCGACGGACAGGGCCA
TAAAAGCGGCCATGCTGCTCGGTGTGGGGCTCGGTTTTTTCCAGCAGGCC
AGCGGCAGCGAGGCGGCCGTGTACTATACACCAGACGTGCTGAAGGAACA
CGAGCGGCCGTGTACTATACACCAGACGTGCTGAAGGAACACGACTGGGA
CCAAACGATGGTGCTTAAGGGCAACATGGGTGTCGGAGGCTGTAAACTGC
TGGGAGAAGTGGTCGCATTTGTTCTCTTGGACAGCTGGGACCAAACGATG
GTGCTTAAGGGCAACATGGGTGTCGGAGGCTGTAAACTGCTGGGAGAAGT
GGTCGCATTTGTTCTCTTGGACAGCAGGATTGGGAGACGTCCGTTGTTCT
TGACGAGCTCGGTGCTGGTGACCATCTGCCTGGTCATGGTTGGGACGGCA
TTTGCTCAAGAGTGGGAAACCCTGGTGGTGTTCTTTTGGCTGTGTATGTT
CATGTTCACCTTCTCTCTTGGACTTGGGCCCGTAACGTTTGTCGTGGCCT
CTGAGCAGGATTGGGAGACGTCCGTTGTTCTTGACGAGCTCGGTGCTGGT
GACCATCTGCCTGGTCATGGTTGGGACGGCATTTGCTCAAGAGTGGGAAA
CCCTGGTGGTGTTCTTTTGGCTGTGTATGTTCATGTTCACCTTCTCTCTT
GGACTTGGGCCCGTAACGTTTGTCGTGGCCTCTGAGATCTTCCCCGTGGC
CGTGAGGGGTAAAGCAATGTCAATCGTGATCTTCGTGAATCGGTTCATGA
GTGGCATCATCGCGTCTTCATTCGAGACGTTGGAGGACTGGATTTCCAAG
CCGGAGGCGTTCTACTTTTTCGCCATACTGTCGTTCGTGTCGATTGCGTT
TTATTATTTTAAGATCTTCCCCGTGGCCGTGAGGGGTAAAGCAATGTCAA
TCGTGATCTTCGTGAATCGGTTCATGAGTGGCATCATCGCGTCTTCATTC
GAGACGTTGGAGGACTGGATTTCCAAGCCGGAGGCGTTCTACTTTTTCGC
CATACTGTCGTTCGTGTCGATTGCGTTTTATTATTTTAAGGTGCCAGAAA
CTCGCGGTAAAACGTTGGAAGCAATCGCCGCAGATCTTGGCTCTGTAGCA
CCACCAGGCTCGAGGAATGTAGGTGGCGGCAGGGGGGAGGCACGCCATGT
GCCCTTGGTGAATAGCGAAGAAGAGGAGGAGCTGGAATAAGTGCCAGAAA
CTCGCGGTAAAACGTTGGAAGCAATCGCCGCAGATCTTGGCTCTGTAGCA
CCACCAGGCTCGAGGAATGTAGGTGGCGGCAGGGGGGAGGCACGCCATGT
GCCCTTGGTGAATAGCGAAGAAGAGGAGGAGCTGGAATAA
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