mRNA_H-paniculata_contig14123.2517.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14123.2517.1 vs. uniprot
Match: UPI001AE8F203 (secreted RxLR effector protein 161-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE8F203) HSP 1 Score: 163 bits (413), Expect = 9.360e-47 Identity = 86/202 (42.57%), Postives = 126/202 (62.38%), Query Frame = 1 Query: 1 LMHVSTGTRPDIAYAVHQAARRMEDPCREDFSTCKRMFRYLSTVPDLGITFGGKCNGHGLEGFVDADWAEDVEDRKSTTGYVLKLDDGAISWCSRKQQLVTWSSTEAEYVAGGETGKETVYLRDLLGSIDLGCRGSTALFEDNTSAINLSKGSGAHCTTKHIGVCLHRIRERIREGVLALKYMQAGHHIADLLTKGLSRVKF 606 L+++ST TRPD+A+AV + AR + P E + K + RYL +LG+ + K N L GF D+DWA D +DRKST+GY+ ++G ISW S+KQ+ V S+ +AEY+A +E +++R+LL +I+ C T +FEDN S I+L+K H KHI + H RE + + L Y Q+ +AD+LTKGLS+VKF Sbjct: 44 LINLSTRTRPDLAFAVGELARYCDAPGSEHWVALKIILRYLKNTKNLGLCYR-KSNKGELVGFSDSDWAGDHDDRKSTSGYIFLYNEGPISWKSQKQRSVALSTVKAEYMALSAASQECIWIRNLLCNIERSCDSPTVIFEDNQSTISLTKNPQYHGRAKHIDIRYHFTRELVEANKITLVYCQSEDMVADMLTKGLSKVKF 244
BLAST of mRNA_H-paniculata_contig14123.2517.1 vs. uniprot
Match: UPI00193C8901 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193C8901) HSP 1 Score: 160 bits (404), Expect = 7.390e-46 Identity = 83/201 (41.29%), Postives = 123/201 (61.19%), Query Frame = 1 Query: 4 MHVSTGTRPDIAYAVHQAARRMEDPCREDFSTCKRMFRYLSTVPDLGITFGGKCNGHGLEGFVDADWAEDVEDRKSTTGYVLKLDDGAISWCSRKQQLVTWSSTEAEYVAGGETGKETVYLRDLLGSIDLGCRGSTALFEDNTSAINLSKGSGAHCTTKHIGVCLHRIRERIREGVLALKYMQAGHHIADLLTKGLSRVKF 606 M ++T TRPDIA+AV + + + + ++ KR+ RYL D G+ + + +EG+VDAD+AED+E R+STTGYV L +GA++W +++Q++VT S+TEAEYVA KE ++LR LL ++ C +T +F DN S + L + S H TKHI V H IRE++ G + K + ADL TK L R +F Sbjct: 1 MFLATVTRPDIAFAVGKVSAFLNNHDVNHWNAVKRIIRYLLNTVDRGVLYESGGSNEEIEGYVDADFAEDLETRRSTTGYVFLLGNGAVTWTAQRQKMVTISTTEAEYVAAAAAAKEAIWLRRLLSGLERNCNRATKVFIDNQSTLRLVQNSEFHKRTKHIDVRCHFIREKVLSGKIDTKCVNTTKQKADLFTKALPRDRF 201
BLAST of mRNA_H-paniculata_contig14123.2517.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 162 bits (411), Expect = 7.490e-46 Identity = 88/201 (43.78%), Postives = 121/201 (60.20%), Query Frame = 1 Query: 1 LMHVSTGTRPDIAYAVHQAARRMEDPCREDFSTCKRMFRYLSTVPDLGITFGGKCNGHGLEGFVDADWAEDVEDRKSTTGYVLKLDDGAISWCSRKQQLVTWSSTEAEYVAGGETGKETVYLRDLLGSIDLGCRGSTALFEDNTSAINLSKGSGAHCTTKHIGVCLHRIRERIREGVLALKYMQAGHHIADLLTKGLSRVK 603 LM+++T TRPDIA AV + A+ E + + KR+ +YL T DLG+ F G G L G+ DA+WA D++ R+STTGYV L+ AISW S++Q V SSTEAEY+A +E V+LR LL + C G+T F+DN I L+K H TKHI + H +RE++ + V+ L+Y IAD TK L+R K Sbjct: 101 LMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALARPK 300
BLAST of mRNA_H-paniculata_contig14123.2517.1 vs. uniprot
Match: A0A085LNL9_9BILA (Uncharacterized protein n=2 Tax=Trichuris suis TaxID=68888 RepID=A0A085LNL9_9BILA) HSP 1 Score: 160 bits (406), Expect = 1.590e-45 Identity = 85/202 (42.08%), Postives = 123/202 (60.89%), Query Frame = 1 Query: 1 LMHVSTGTRPDIAYAVHQAARRMEDPCREDFSTCKRMFRYLSTVPDLGITFGGKCNGHGLEGFVDADWAEDVEDRKSTTGYVLKLDDGAISWCSRKQQLVTWSSTEAEYVAGGETGKETVYLRDLLGSIDLGCRGSTALFEDNTSAINLSKGSGAHCTTKHIGVCLHRIRERIREGVLALKYMQAGHHIADLLTKGLSRVKF 606 L++++T +RPDIA+AV Q RR+E P + D+ KR+ RYL+ + F + N L GFVDADWA D DRKST+GYV ++ I+W S+KQ +V SSTEAEYVA E +E +LR LL +++ G T ++EDN I +++ TKHI V H++R+ G+++L Y + AD+LTK L + KF Sbjct: 65 LLYLATVSRPDIAFAVGQLCRRVESPTQSDWKAVKRVIRYLAGSVSQKLRFSSEGNIK-LTGFVDADWAGDHADRKSTSGYVFQIGHSTIAWSSKKQSVVAMSSTEAEYVAASEACREVQWLRQLLADMEVPQDGPTKIYEDNQGCIKVAQSDRCSQRTKHIDVRHHQLRDLCESGIVSLVYCPSSEMPADVLTKPLGKDKF 265
BLAST of mRNA_H-paniculata_contig14123.2517.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F) HSP 1 Score: 159 bits (403), Expect = 2.080e-45 Identity = 82/202 (40.59%), Postives = 124/202 (61.39%), Query Frame = 1 Query: 1 LMHVSTGTRPDIAYAVHQAARRMEDPCREDFSTCKRMFRYLSTVPDLGITFGGKCNGHGLEGFVDADWAEDVEDRKSTTGYVLKLDDGAISWCSRKQQLVTWSSTEAEYVAGGETGKETVYLRDLLGSIDLGCRGSTALFEDNTSAINLSKGSGAHCTTKHIGVCLHRIRERIREGVLALKYMQAGHHIADLLTKGLSRVKF 606 L+++ST TRPDIA+AV A DP ++ ++ KR+ RYL+ LG+ + + G+ DADWA D++DRKS +GY+ K+ A+SW S+KQ V S+ EAEY+A +E V++R LL + G+T ++EDN SAI +++ H KHI + H IR+++ G + LK + IAD+LTKGL++VKF Sbjct: 34 LLYLSTRTRPDIAFAVSNVASFCSDPTKQHWTAVKRILRYLNGTQPLGLLYSKNTEKECI-GYSDADWAGDLDDRKSVSGYMFKMSGAAVSWKSKKQSXVLLSTAEAEYMALASAAQEAVWMRQLLSDLKNCPAGATVIYEDNQSAICMARNPQFHGRAKHIDIKHHFIRDQVASGAVDLKDCKTDDMIADMLTKGLTQVKF 234
BLAST of mRNA_H-paniculata_contig14123.2517.1 vs. uniprot
Match: A0A4S4L493_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L493_9AGAM) HSP 1 Score: 168 bits (426), Expect = 4.660e-45 Identity = 86/201 (42.79%), Postives = 117/201 (58.21%), Query Frame = 1 Query: 1 LMHVSTGTRPDIAYAVHQAARRMEDPCREDFSTCKRMFRYLSTVPDLGITFGGKCNGHGLEGFVDADWAEDVEDRKSTTGYVLKLDDGAISWCSRKQQLVTWSSTEAEYVAGGETGKETVYLRDLLGSIDLGCRGSTALFEDNTSAINLSKGSGAHCTTKHIGVCLHRIRERIREGVLALKYMQAGHHIADLLTKGLSRVK 603 +M TRPD+AY V ++ P E R+F+YL D+ + + GK GL G+V ADWA DV DR+S +GYV K+ +GAISW S+KQ SST AEYV+G KE ++LR LL + L C +T L DN SA+ +++ H TKHIG H + E++ G L L+Y+ G +AD+LTKGL R K Sbjct: 539 IMWAMLXTRPDLAYTVGALSQHSSSPSEEALHALMRVFKYLRGTSDMKLIYQGK-KSKGLTGYVXADWAGDVNDRRSISGYVFKIAEGAISWSSKKQGSTALSSTXAEYVSGAHAAKELIWLRTLLAELGLPCDKATPLLTDNQSAMAIAQNXVYHALTKHIGAXXHFLXEKVASGELRLEYVPTGEQVADVLTKGLPREK 738
BLAST of mRNA_H-paniculata_contig14123.2517.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA) HSP 1 Score: 158 bits (400), Expect = 4.820e-45 Identity = 84/201 (41.79%), Postives = 121/201 (60.20%), Query Frame = 1 Query: 1 LMHVSTGTRPDIAYAVHQAARRMEDPCREDFSTCKRMFRYLSTVPDLGITFGGKCNGHGLEGFVDADWAEDVEDRKSTTGYVLKLDDGAISWCSRKQQLVTWSSTEAEYVAGGETGKETVYLRDLLGSIDLGCRGSTALFEDNTSAINLSKGSGAHCTTKHIGVCLHRIRERIREGVLALKYMQAGHHIADLLTKGLSRVK 603 LM+++T TRP+IAYAV + A+ E + + KR+ +YL T D+G+ F G G L G+ DA+WA D++ R+STTGYV L+ AISW S++Q V SSTEAEY+A +E V+LR LL + +G+T +++DN I L+K H TKHI + H +RE++ + L+Y IAD TK L+R K Sbjct: 29 LMYLATSTRPNIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIKGE-LVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTKALARDK 228
BLAST of mRNA_H-paniculata_contig14123.2517.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI) HSP 1 Score: 159 bits (403), Expect = 5.700e-45 Identity = 95/213 (44.60%), Postives = 122/213 (57.28%), Query Frame = 1 Query: 1 LMHVSTGTRPDIAYAVHQAARRMEDPCREDFSTCKRMFRYLSTVPDLGITFGGKCNG---HGLE--GFVDADWAEDVEDRKSTTGYVLKLDDGAISWCSRKQQLVTWSSTEAEYVAGGETGKETVYLRDLLGSID------LGCRGSTALF-EDNTSAINLSKGSGAHCTTKHIGVCLHRIRERIREGVLALKYMQAGHHIADLLTKGLSRVK 603 LM+ G+RPDIA+AV ++ P E ++ R+FRYL L +T+G HGL G+ DADWA D DR+ST+ YV KL GAISWCSRKQQ + SSTEAEYVA KE ++L LL +D L R L DN SA+ L+K S H TKHI V H IR+ + G L ++Y+ G +AD+LTK L+R K Sbjct: 61 LMYAMLGSRPDIAFAVGTLSKHASTPGTEHWNALMRVFRYLRGTSGLRLTYGKDLKPLCEHGLTVVGYSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTLLSDLDSPVFHALSSRLQVPLILVDNQSAMALAKNSSFHDRTKHIAVRHHFIRDELERGTLTVEYVPTGDQVADVLTKSLAREK 273
BLAST of mRNA_H-paniculata_contig14123.2517.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY) HSP 1 Score: 158 bits (400), Expect = 6.930e-45 Identity = 87/202 (43.07%), Postives = 122/202 (60.40%), Query Frame = 1 Query: 1 LMHVSTGTRPDIAYAVHQAARRMEDPCREDFSTCKRMFRYLSTVPDLGITFGGKCNGHGLEGFVDADWAEDVEDRKSTTGYVLKLDDGAISWCSRKQQLVTWSSTEAEYVAGGETGKETVYLRDLLGSIDLGCRGSTALFEDNTSAINLSKGSGAHCTTKHIGVCLHRIRERIREGVLALKYMQAGHHIADLLTKGLSRVKF 606 LM + RPDIA+AV+ +R + ++ KR+ RYL DLGI + + + GF D+D+A DV+ RKSTTGYV + +GAI+WCSR+QQ + S+TEAEYVA E KE ++LR LL I + L+ DN SAI L K H TKHI V H I+E+ + G + ++Y+++ +AD+LTK L VKF Sbjct: 44 LMFAAITARPDIAFAVNVVSRFQNNQGAPHWNAVKRIMRYLKHTKDLGIRY--TFSDEPVHGFSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPLVSVKF 243
BLAST of mRNA_H-paniculata_contig14123.2517.1 vs. uniprot
Match: UPI001EE6E994 (secreted RxLR effector protein 161-like n=1 Tax=Neodiprion lecontei TaxID=441921 RepID=UPI001EE6E994) HSP 1 Score: 158 bits (400), Expect = 7.130e-45 Identity = 86/202 (42.57%), Postives = 122/202 (60.40%), Query Frame = 1 Query: 1 LMHVSTGTRPDIAYAVHQAARRMEDPCREDFSTCKRMFRYLSTVPDLGITFGGKCNGHGLEGFVDADWAEDVEDRKSTTGYVLKLDDGAISWCSRKQQLVTWSSTEAEYVAGGETGKETVYLRDLLGSIDLGCRGSTALFEDNTSAINLSKGSGAHCTTKHIGVCLHRIRERIREGVLALKYMQAGHHIADLLTKGLSRVKF 606 L+ ++ +RPDIAYAV+ +R + + E + KR+ YLS GI F G +G L + DAD+AED E R+STTGYV +L G I+W S++Q+LVT S+TEAEYV T +E ++LR LL I+ C +T +F DN SAI L + H TKHI + H IRE++ E +L ++Y+Q D+ TK R +F Sbjct: 39 LIFLAIVSRPDIAYAVNSVSRFLNNHSDEHWRAVKRILAYLSGTIGYGIEFCG--SGSELVDYSDADYAEDAETRRSTTGYVFQLAGGPITWASQRQKLVTLSTTEAEYVVASVTSREAIWLRKLLLDIEYPCADATVIFVDNQSAIRLVRNPEFHKRTKHIDIRYHYIREKVVEKILKIEYVQTKQQKGDIFTKAQPRERF 238 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14123.2517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14123.2517.1 >prot_H-paniculata_contig14123.2517.1 ID=prot_H-paniculata_contig14123.2517.1|Name=mRNA_H-paniculata_contig14123.2517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=202bp MHVSTGTRPDIAYAVHQAARRMEDPCREDFSTCKRMFRYLSTVPDLGITFback to top mRNA from alignment at H-paniculata_contig14123:6217..6825- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14123.2517.1 ID=mRNA_H-paniculata_contig14123.2517.1|Name=mRNA_H-paniculata_contig14123.2517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=609bp|location=Sequence derived from alignment at H-paniculata_contig14123:6217..6825- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14123:6217..6825- >mRNA_H-paniculata_contig14123.2517.1 ID=mRNA_H-paniculata_contig14123.2517.1|Name=mRNA_H-paniculata_contig14123.2517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1212bp|location=Sequence derived from alignment at H-paniculata_contig14123:6217..6825- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |