mRNA_H-paniculata_contig14094.2497.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14094.2497.1 vs. uniprot
Match: D8LNN4_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN4_ECTSI) HSP 1 Score: 188 bits (477), Expect = 4.320e-54 Identity = 98/151 (64.90%), Postives = 122/151 (80.79%), Query Frame = 1 Query: 1 QIGMEAFGRAGLLMVDVSLVMSQLSFCCAYFIFVVKNISSVLPVPSAGSVSEFLLTADILIALQLLVYIPMALIRKLKYLALAMCVANVCLLLGLVMIVFMDTRILMENGPVPVLMYNPDSYIMFMGAVVVCFEGIGLVLPLRDSLDTHLQ 453 Q+G FG+ G L+VDVSLV+SQLSFC +YFIF+V NI S LPVP GS E+LL+ + L+A+QLLVYIPMA IR LKYLALAM ANVC+ LGL++IV +D +LM GP PVL YN D++I+F+GAVVVCFEGIGLVLPLRDS++ H++ Sbjct: 243 QLGYAVFGKVGQLLVDVSLVLSQLSFCSSYFIFIVLNIPSALPVPPPGSRLEYLLSPNALVAMQLLVYIPMAWIRHLKYLALAMFGANVCMWLGLILIVGIDAELLMREGPEPVLQYNLDTFIIFVGAVVVCFEGIGLVLPLRDSMEPHMR 393
BLAST of mRNA_H-paniculata_contig14094.2497.1 vs. uniprot
Match: K3X5P2_GLOUD (Aa_trans domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5P2_GLOUD) HSP 1 Score: 108 bits (271), Expect = 8.160e-25 Identity = 63/153 (41.18%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 1 QIGMEAFGRAGLLMVDVSLVMSQLSFCCAYFIFVVKNISSVLPVPSAGSVSEFLLTADILIALQLLVYIPMALIRKLKYLALAMCVANVCLLLGLVMIVFMDTRILMENGPVPVLM--YNPDSYIMFMGAVVVCFEGIGLVLPLRDSLDTHLQ 453 Q+G +FGRAG V+VSLV+SQL FCC+Y IFV KNI ++ GS S + +LI LQ+ +Y P+ +R+++Y A+ +A+V +L GL+ I+ L P +N S+ +F+G V CFEGIGLVLP+ D++D+ +Q Sbjct: 237 QLGQRSFGRAGRFAVNVSLVLSQLGFCCSYLIFVEKNIGDIIEQVFHGS-SSIASFSWVLILLQIPLYTPLTWVRRIEYFAMTNLIADVLILFGLIYIIGYSVERLEAAPPDSSTWENFNSKSWALFLGTAVYCFEGIGLVLPIYDAMDSKIQ 388
BLAST of mRNA_H-paniculata_contig14094.2497.1 vs. uniprot
Match: A0A662XLC3_9STRA (Aa_trans domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLC3_9STRA) HSP 1 Score: 104 bits (259), Expect = 3.640e-23 Identity = 62/153 (40.52%), Postives = 98/153 (64.05%), Query Frame = 1 Query: 4 IGMEAFGRAGLLMVDVSLVMSQLSFCCAYFIFVVKNISSVLPVPSAGSVSEFLLTADI-LIALQLLVYIPMALIRKLKYLALAMCVANVCLLLGLVMIVFMDTRILMENGPVPVLM--YNPDSYIMFMGAVVVCFEGIGLVLPLRDSLDTHLQ 453 +G +FG+ G + V+VSLV+SQ+ FCC+Y IFV KNI V + +A ++ ++ I LIALQ+L+Y P++ +R+++Y AL A++ +L GLV I+ + L + P +N S+ MF+G V CFEGIGLVLP+ D++D ++ Sbjct: 247 LGERSFGKLGRVAVNVSLVLSQIGFCCSYLIFVEKNIGEV--ILAAFNIQRSGASSSITLIALQILLYTPLSWVRRIEYFALTNLFADLLILFGLVYILSYTVKTLEDAPPGSATWKNFNSTSWAMFLGTAVYCFEGIGLVLPIYDAMDEDIK 397
BLAST of mRNA_H-paniculata_contig14094.2497.1 vs. uniprot
Match: A0A7R9Y9Y3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9Y3_9STRA) HSP 1 Score: 102 bits (253), Expect = 4.430e-23 Identity = 64/146 (43.84%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 4 IGMEAFGRAGLLMVDVSLVMSQLSFCCAYFIFVVKNISSVLPVPSAGSVSEFLLTADILIALQLLVYIPMALIRKLKYLALAMCVANVCLLLGLVMIV-FMDTRILMENGPVPVLMYNPDSYIMFMGAVVVCFEGIGLVLPLRDSL 438 IG EA G G V++SL SQ ++C YFIFV N+S VL V V + L + LQL+ YIP++ +R++K L+ AM ANVC+ G+V ++ F RI E V NP +F G+VV+CFEGIGLVLP+RD + Sbjct: 12 IGKEAVGPWGHGAVELSLFASQFAYCTTYFIFVADNLSMVLEVAFGWHVGQLTL-----MLLQLIAYIPLSWVRRIKVLSQAMLFANVCIATGIVTVIGFASHRIAAEGFHRDVEAINPKGLFLFTGSVVICFEGIGLVLPIRDMM 152
BLAST of mRNA_H-paniculata_contig14094.2497.1 vs. uniprot
Match: H3GRM9_PHYRM (Aa_trans domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRM9_PHYRM) HSP 1 Score: 103 bits (258), Expect = 4.770e-23 Identity = 60/154 (38.96%), Postives = 100/154 (64.94%), Query Frame = 1 Query: 4 IGMEAFGRAGLLMVDVSLVMSQLSFCCAYFIFVVKNISSVLPVPSAGSVSEFLLTADI-LIALQLLVYIPMALIRKLKYLALAMCVANVCLLLGLVMIVFMDTRILMENGPVPV---LMYNPDSYIMFMGAVVVCFEGIGLVLPLRDSLDTHLQ 453 +G +AFG+ G + V++SLV+SQ+ FCC+Y IFV KNI V + +A ++ ++ + LI LQ+L+Y P++ +R+++Y AL A++ +L G+V I+ + L +N PV + +N S+ M +G V CFEGIGLVLP+ D++D ++ Sbjct: 229 VGEKAFGKVGRVAVNISLVLSQIGFCCSYLIFVEKNIGEV--ILAAFNIQSTTASSSLTLIMLQILLYTPLSWVRRIEYFALTNLFADLLILFGIVYIISYTVQTL-DNAPVGSATWVNFNSTSWAMMLGTAVYCFEGIGLVLPIYDAMDDDIK 379
BLAST of mRNA_H-paniculata_contig14094.2497.1 vs. uniprot
Match: A0A662XM46_9STRA (Aa_trans domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XM46_9STRA) HSP 1 Score: 102 bits (254), Expect = 7.780e-23 Identity = 62/149 (41.61%), Postives = 95/149 (63.76%), Query Frame = 1 Query: 4 IGMEAFGRAGLLMVDVSLVMSQLSFCCAYFIFVVKNISSVLPVPSAGSVSEFLLTADI-LIALQLLVYIPMALIRKLKYLALAMCVANVCLLLGLVMIVFMDTRILMENGPVPVLM--YNPDSYIMFMGAVVVCFEGIGLVLPLRDSLD 441 +G ++FG+ G + V+VSLV+SQ+ FCC+Y IFV KNI V + +A S+ ++ I LIALQ+L+Y P+ +R+++Y AL A++ +L G+V I+ L + P +N S+ MF+G V CFEGIGLVLP+ D++D Sbjct: 88 LGEKSFGKLGRVAVNVSLVLSQIGFCCSYLIFVEKNIGEV--ILAAFSIQRSGASSSITLIALQILLYTPLTWVRRIEYFALTNLFADLLILFGIVYILSYTVTTLEDAPPGTATWENFNSTSWAMFLGTAVYCFEGIGLVLPIYDAMD 234
BLAST of mRNA_H-paniculata_contig14094.2497.1 vs. uniprot
Match: A0A5D6Y6B6_9STRA (Aa_trans domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6B6_9STRA) HSP 1 Score: 103 bits (256), Expect = 9.560e-23 Identity = 66/156 (42.31%), Postives = 93/156 (59.62%), Query Frame = 1 Query: 1 QIGMEAFGRAGLLMVDVSLVMSQLSFCCAYFIFVVKNISSVLPVPSAGSVSEFLLTADI----LIALQLLVYIPMALIRKLKYLALAMCVANVCLLLGLVMIVFMDTRILMENGPVPVLM-YNPDSYIMFMGAVVVCFEGIGLVLPLRDSLDTHLQ 453 ++G AFG AG + V+VSLV+SQL FCC+Y IFV KN+ VL + L T D L+ LQ+ +Y P+ +R+L+Y AL VA+V +L GL I+ + R L P +N S+ +F+G V CFEGIGLVLP+ D++D +Q Sbjct: 263 RVGERAFGAAGRVAVNVSLVLSQLGFCCSYLIFVEKNVGGVL--------APLLPTRDAAPWTLLLLQVPLYTPLTWVRRLEYFALTNLVADVLILGGLAYILGVSVRTLEAAAAPPTWENFNARSWALFLGTAVYCFEGIGLVLPIYDAMDPKVQ 410
BLAST of mRNA_H-paniculata_contig14094.2497.1 vs. uniprot
Match: G5A3F3_PHYSP (Aa_trans domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=G5A3F3_PHYSP) HSP 1 Score: 102 bits (254), Expect = 1.680e-22 Identity = 59/153 (38.56%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 4 IGMEAFGRAGLLMVDVSLVMSQLSFCCAYFIFVVKNISSVLPVPSAGSVSEFLLTADILIALQLLVYIPMALIRKLKYLALAMCVANVCLLLGLVMIVFMDTRILMENGPVPVLM---YNPDSYIMFMGAVVVCFEGIGLVLPLRDSLDTHLQ 453 +G +AFG+ G + V++SLV+SQ+ FCC+Y IFV KNI V+ + G ++ L+ALQ+L+Y P++ +R+++Y AL A++ +L GLV I+ + + ++ PV +N S+ M +G V CFEGIGLVLP+ D++D ++ Sbjct: 230 VGEKAFGKVGRVAVNISLVLSQIGFCCSYLIFVEKNIGEVI-LAIFGVQRTTASSSLTLLALQILLYTPLSWVRRIEYFALTNLFADLLILFGLVYIITYSVQTI-DDAPVGTATWENFNSTSWAMMLGTAVYCFEGIGLVLPIYDAMDDDIK 380
BLAST of mRNA_H-paniculata_contig14094.2497.1 vs. uniprot
Match: M4BRX0_HYAAE (Aa_trans domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRX0_HYAAE) HSP 1 Score: 101 bits (251), Expect = 4.290e-22 Identity = 60/149 (40.27%), Postives = 95/149 (63.76%), Query Frame = 1 Query: 4 IGMEAFGRAGLLMVDVSLVMSQLSFCCAYFIFVVKNISSVLPVPSAGSVSEFLLTADILIALQLLVYIPMALIRKLKYLALAMCVANVCLLLGLVMIVFMDTRILMENGPVPVLM---YNPDSYIMFMGAVVVCFEGIGLVLPLRDSLD 441 +G +AFG+ G + V++SLV+SQL FCC+Y IFV KNI V+ + + G S ++ LI LQ+L+Y P++ +R+++Y AL A++ +L G+V I+ + L ++ P +N S+ M +G V CFEGIGLVLP+ D++D Sbjct: 227 VGEKAFGKVGRVAVNISLVLSQLGFCCSYLIFVEKNIGEVI-LAAFGIQSTTASSSLTLIVLQILLYTPLSWVRRIEYFALTNLFADLLILFGIVYIISYTVQTL-DDAPANSSSWENFNSKSWAMLLGTAVYCFEGIGLVLPIYDAMD 373
BLAST of mRNA_H-paniculata_contig14094.2497.1 vs. uniprot
Match: A0A2P4Y026_9STRA (Vacuolar amino acid transporter (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y026_9STRA) HSP 1 Score: 100 bits (248), Expect = 4.560e-22 Identity = 60/154 (38.96%), Postives = 98/154 (63.64%), Query Frame = 1 Query: 4 IGMEAFGRAGLLMVDVSLVMSQLSFCCAYFIFVVKNISSVLPVPSAGSVSEFLLTADI-LIALQLLVYIPMALIRKLKYLALAMCVANVCLLLGLVMIVFMDTRILMENGPVPVLM---YNPDSYIMFMGAVVVCFEGIGLVLPLRDSLDTHLQ 453 +G +AFG+ G + V++SLV+SQ+ FCC+Y IFV KNI V + +A + + ++ + LI LQ+L+Y P++ +R+++Y AL A++ +L GLV I+ L ++ PV +N S+ M +G V CFEGIGLVLP+ D++D ++ Sbjct: 68 VGEKAFGKVGRVAVNISLVLSQIGFCCSYLIFVEKNIGEV--ILAAFGIERTVASSSLTLIMLQILLYTPLSWVRRIEYFALTNLFADLLILFGLVYIISYTIHSL-DDAPVGSATWENFNSTSWGMMLGTSVYCFEGIGLVLPIYDAMDADIK 218 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14094.2497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14094.2497.1 >prot_H-paniculata_contig14094.2497.1 ID=prot_H-paniculata_contig14094.2497.1|Name=mRNA_H-paniculata_contig14094.2497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp MEAFGRAGLLMVDVSLVMSQLSFCCAYFIFVVKNISSVLPVPSAGSVSEFback to top mRNA from alignment at H-paniculata_contig14094:376..6208+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14094.2497.1 ID=mRNA_H-paniculata_contig14094.2497.1|Name=mRNA_H-paniculata_contig14094.2497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5833bp|location=Sequence derived from alignment at H-paniculata_contig14094:376..6208+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14094:376..6208+ >mRNA_H-paniculata_contig14094.2497.1 ID=mRNA_H-paniculata_contig14094.2497.1|Name=mRNA_H-paniculata_contig14094.2497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig14094:376..6208+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |