mRNA_H-paniculata_contig14078.2491.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14078.2491.1
Unique NamemRNA_H-paniculata_contig14078.2491.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig14078.2491.1 vs. uniprot
Match: A0A6H5K904_9PHAE (PPIase cyclophilin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K904_9PHAE)

HSP 1 Score: 398 bits (1022), Expect = 1.570e-128
Identity = 279/484 (57.64%), Postives = 315/484 (65.08%), Query Frame = 1 
Query:    1 QITGNTIFNALRMGDVDTDKDDRPLEPPRLISVEVLLNPFDDIIPRNLT------ATAXXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDARA----------SSVRGVKSAHDILDDEKFSKDAAYDVDAVRAAEAVAEVAERGARKGEELRTAVKTAAXXXXXXXXXXXXXXXXXXXXXSGDETEKNRKRRLHPQAFDDGTAFMNKMRAKMVEKAKLLEGKGASSTSAATKAPXXXXXXXXXSSRRGSTGREMENDQVDFEGEEEETEIKKGEKGVASGGGDTEGGWAGGD---ETDKERARRKAIKERAKEYESRREELKAKHGAARVMTGEERVKYDAEHQHREMLSPVEQMRAKFKKRRKEAGSREDSTLAKLAKFTSTIRTTKKLASVDDKKAEKKVVEAYHGQVTEGKLYEGDDDADDDQGWFTGALKFKKHIDDDLRRGSDGRNADDYAVIDPLKQ----GARHADA 1383
            +ITGNTIFNALRMGD+DTDKDDRPLEPPRLISVEVLLNPFDDI+PR+L+      A  XXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDA            S+ RG+KSAHD LDDEK SK                       +  + LR AVK+AA                     +G           HP+  DDG AFM KMR KM++K K LE                          +   G + +++ +DFE                     T  GW GGD   ETDKE+ARRKAIK+RAKEYES REE+KAKH AARVMTGEER KYDAEH H+EM+SPVEQMRAK+KKRRKEAG+REDST+AKLA FTST+RT+KK A  +DK AE+K VEAYHGQVTEGKLYEG+DDADD + WFTG LKFK+HIDDDLR+GSDGR ADDYAVIDPLKQ    G R  DA
Sbjct:  165 KITGNTIFNALRMGDIDTDKDDRPLEPPRLISVEVLLNPFDDIVPRDLSGRGGEAAXXXXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDALVXXXXXXXXSKSAGRGIKSAHDALDDEKLSKXXXXXXXXXX----XXXXXXXXXKLKDGLRKAVKSAAVAGKGAREDAGSS--------NGAXXXXXXXXXGHPEPLDDGDAFMQKMRQKMMDKRKALE--------------------------KSKDGGDNDDNPLDFEPXXXXXXXXXXXXXXXX---XTGAGWRGGDADDETDKEKARRKAIKQRAKEYESLREEMKAKHRAARVMTGEERAKYDAEHMHQEMISPVEQMRAKYKKRRKEAGTREDSTMAKLAAFTSTMRTSKKRAKTEDK-AEEKKVEAYHGQVTEGKLYEGEDDADDGENWFTGPLKFKRHIDDDLRKGSDGRRADDYAVIDPLKQQQPKGGRGNDA 606
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BLAST of mRNA_H-paniculata_contig14078.2491.1 vs. uniprot
Match: A0A835YS24_9STRA (Cyclophilin-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS24_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.670e-70
Identity = 186/462 (40.26%), Postives = 244/462 (52.81%), Query Frame = 1 
Query:    1 QITGNTIFNALRMGDVDTDKDDRPLEPPRLISVEVLLNPFDDIIPRNLTATAXXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDARASSVRGVKSAHDILDDEKFSKDAAY---DVDAVRAAEAVAEVAERGARKGEELRTAVKTAAXXXXXXXXXXXXXXXXXXXXXSGDETEKNRKRRLHPQAFDDGTAFMNKMRAKMVEKAKLLEGKGASSTSAATKAPXXXXXXXXXSSRRGSTGREMENDQVDFEGEEEETEIKKGEKGVASGGGDTEGGWAGGDETDKERARRKAIKERAKEYESRREELKAKHGAARVMTGEERVKYDAEHQHREMLSPVEQMRAKFKKRR-KEAGSREDSTLAKLAKFTSTIRTTKKLASVDDKKA--EKKVVEAYHGQVTEGKLYEGDDDADDDQGWFTGALKFK--KHIDDDLRRG-----SDGRNADDYAVI 1347
            +ITGNTIFNALRMGD +TD +DRP++PP+L+ ++VL NPFDDI+PR   A A                   GKKDFKLLSFGEEA +EE++    A+S  G+KSAHD+L DEK S +AAY   DV+  RA+        RGA  G+E                                D+ E +          DDG  FM +M+ +M +K + LEG          + P                         D + + EE E+                     D+  +ER+R  A +E+A+EYE  R EL+AKH A +V+TGEER K DA+  H+EMLSP+EQMR K+K+ +  E+GSRE  T+AKLA F+  IR      + DD++   E+K  EAYHGQVTEG LYEG+D  D+ + WF+  LKFK  KHIDD LR G     SDGR A DY V+
Sbjct:  133 KITGNTIFNALRMGDAETDDNDRPVDPPKLVGIDVLHNPFDDIVPRASKAKAGADATPKPKAKPK------GKKDFKLLSFGEEAQEEEQQ----AASTGGIKSAHDMLRDEKLSAEAAYADVDVEQRRASG-------RGAGDGDE------QLPQGNKRQRRGDDATDRAAALGKGADDDEGD---------GDDGDTFMERMKRQMRDKRRKLEGPQGGGKGGGEEPP-------------------------DLKAQYEEDEL---------------------DKMRQERSR--AAQEKAQEYERLRSELRAKHRATKVVTGEERQKLDAQQAHQEMLSPLEQMRQKYKRHKGAESGSRETDTMAKLAAFSKKIRIQHGARAHDDEQLAKERKEEEAYHGQVTEGALYEGEDSGDEAKAWFSAPLKFKGAKHIDDGLRAGTAATGSDGRKASDYTVL 514
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BLAST of mRNA_H-paniculata_contig14078.2491.1 vs. uniprot
Match: A0A1V9ZJ55_9STRA (Peptidyl-prolyl cis-trans isomerase CWC27-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJ55_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.660e-22
Identity = 126/451 (27.94%), Postives = 182/451 (40.35%), Query Frame = 1 
Query:    1 QITGNTIFNALRMGDVDTDKDDRPLEPPRLISVEVLLNPFDDIIPRNLTATAXXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDARASSVRGVKSAHDIL-DDEKFSKDAAYDVDAVRAAEAVAEVAERGARKGEELRTAVKTAAXXXXXXXXXXXXXXXXXXXXXSGDETEKNRKRRLHPQAFDDGTAFMNKMRAKMVEKAKLLEGKGASSTSAATKAPXXXXXXXXXSSRRGSTGREMENDQVDFEGEEEETEIKKGEKGVASGGGDTEGGWAGGDETDKERARRKAIKERAKEYESRREELKAKHGAARVMTGEERVKYDAEHQHREMLSPVEQMRAKFKKRRKEAGSREDSTLAKLAKFTSTIRTTKKLASVDDKKAEKKVVEAYHGQVTEGKLYEGDDDADDDQGWFTGALKFKKHIDDDLRRGSDGRNADDYAVID 1350
            +ITGNTIFN L + D++T +++RPLEP +L+ +E+L NPF DI+PR + A +                     KD KLLSFG++A+    +  A  +  +G  S+HDIL +D+K S                       AR    L+T +                          GD TE      L   A  D    ++ ++A +  K   L+ K  +  + A   P                   ++ D  D                                                 EY + +EELK  + A  V+TG +  K D E    EML+P++  R K+  ++K  G R+ +TL +L KF  T+     L+    KK E    E+YHGQV        +D  +DD+GW T  LKFKKHIDD  R G D  N D+Y  ID
Sbjct:  133 KITGNTIFNLLTVNDMETGRNERPLEPVKLLGIEILWNPFTDIVPRAIKAASAPADAPKPKNKRK------ATKDLKLLSFGDDAE----DAFAPTTKKKGSMSSHDILKNDKKLS-----------------------ARVDASLQTKIALIRTEDYHDEPL-------------GDTTED-----LRAAAGGD----VSSLKALIANK---LKKKPTNVHTTAVPKPAV-----------------VDEDIDDVXXXXXXXXXXXXXXXXKD------------------------------EYTALKEELKKSNKAVHVVTGAKAKKLDDEKAFHEMLTPLQMRRQKYLAQKKSIGERQANTLERLEKFRKTLVQQHSLSKAAPKKPES---ESYHGQVLSEDSDAQEDGDNDDKGWMTAKLKFKKHIDDQYRMGYDP-NTDNYMTID 474
[Close]
BLAST of mRNA_H-paniculata_contig14078.2491.1 vs. uniprot
Match: A0A2R6WA55_MARPO (PPIase cyclophilin-type domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WA55_MARPO)

HSP 1 Score: 107 bits (268), Expect = 2.690e-21
Identity = 131/456 (28.73%), Postives = 196/456 (42.98%), Query Frame = 1 
Query:    1 QITGNTIFNALRMGDVDTDKDDRPLEPPRLISVEVLLNPFDDIIPRNLTATAXXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDARASSVRGVKSAHDILDDEKFSKDAAYDVDAVRAAEAVAEVAERGARKGEELRTAVKTAAXXXXXXXXXXXXXXXXXXXXXSGDETEKNRKRRLHPQAFDDGTAFMNKMRAKMVEKAKLLEGKGASSTSAATKAPXXXXXXXXXSSRRGSTGREMENDQVDFEGEEEETEIKKGEKGVASGGGDTEGGWAGGDETDKERARRKAIKERAKEYESRREELKAKHGAARVMTGEERVKYDAEHQHREMLSPVEQMRAKFKKRRKEAGSREDSTLAKLAKFTSTIRTTKKLASVDDKKAEKKVVEAYHGQVTEGKLYEGDDDADDDQGWFTGALKF----KKHIDDDLRRGSDGRNADDYAVIDPL 1356
            ++TG TI+N +++G+V+TDK+DRPL+PP+++SVEVL NPFDDI+ RNL  +A                    KK+  LLSFGEEA++EE++L   A   + ++S+HD+L D +  K          AA    EV    A++ + ++ +V+ A                      S DE E +  +R+  Q        MN   +K +   +  +GK +S+T  ++  P          SR     RE          ++E+  IKK  +G+ S                                     E +A+  A   +               ++LSP+EQ RA+FK+R++    RE++TLAKL KF       KKL    DK    K  EA                A+DD+GW   +LKF    KK   DD+ R  D      Y V DPL
Sbjct:  133 KVTGETIYNLIKIGEVETDKEDRPLDPPKILSVEVLWNPFDDIVIRNLRQSADVQEATEAASKEKKGRKV--KKELNLLSFGEEAEEEEQQL--AAVKEKKIRSSHDVLQDPRLLK----------AASDALEVDPTEAKRRKGVQESVRQALGGSGKDNAVSEHREREAPSHGS-DEDEVDFDKRMREQIMKKR---MNLADSKTIGSDRK-QGK-SSTTKKSSVPPATPSSRPDVPSRHEEKSREDXXXXXXXGTKKEKLSIKK--RGLGS-------------------------------------EARAEAAATADLD-------------MQLLSPLEQQRARFKQRKRTLQGREENTLAKLEKFK------KKLLDTKDKSV--KSAEATK--------------AEDDEGWLAHSLKFIADPKK---DDMSRNEDPNQ---YIVQDPL 488
[Close]
BLAST of mRNA_H-paniculata_contig14078.2491.1 vs. uniprot
Match: S8D7H0_9LAMI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8D7H0_9LAMI)

HSP 1 Score: 105 bits (263), Expect = 9.460e-21
Identity = 59/126 (46.83%), Postives = 84/126 (66.67%), Query Frame = 1 
Query:    1 QITGNTIFNALRMGDVDTDKDDRPLEP-PRLISVEVLLNPFDDIIPRNLTATAXXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDARASSVRGVKSAHDILDDEKFSKDAAYDVDAV 375
            ++TG++IFN +++G+++TDKDDRPLEP P+++SVEVL NPFDDI+PR   A +                     K+F LLSFGEEA++EEKEL A  S   G+KS+HD+LDD +  K+   +V +V
Sbjct:  133 KVTGDSIFNLIQLGEIETDKDDRPLEPLPKILSVEVLWNPFDDIVPRTTPAESLPPPEKNETKVK-------ATKNFNLLSFGEEAEEEEKELAALDS---GIKSSHDVLDDPRLLKEDPENVQSV 248
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BLAST of mRNA_H-paniculata_contig14078.2491.1 vs. uniprot
Match: A0A2P5DEN8_PARAD (Cyclophilin-type peptidyl-prolyl cis-trans isomerase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5DEN8_PARAD)

HSP 1 Score: 105 bits (262), Expect = 1.370e-20
Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 1 
Query:    1 QITGNTIFNALRMGDVDTDKDDRPLEPP-RLISVEVLLNPFDDIIPRNLTATAXXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDARASSVRGVKSAHDILDDEKFSKDAA----YDVDAVRAAEAVAEVAERGARKGEELRTAVK 450
            +ITG++I+N  R+GDV+TDK+DRPL+PP +++SVEVL NPFDDI+PR L  T+                   G K   LLSFGEEA++EEKEL   A+  + +KS+HD+LDD +  K+A      D +A R  E    V E    K EE +  V+
Sbjct:  133 KITGDSIYNLARLGDVETDKNDRPLDPPPKILSVEVLWNPFDDIVPRELAKTSGPSTNDTDSKDTKKN----GVKKLNLLSFGEEAEEEEKEL---AAVKKKIKSSHDVLDDPRLLKEATPNDELDSEAKRVREVQLSVREALNSKKEEFQNGVE 280
[Close]
BLAST of mRNA_H-paniculata_contig14078.2491.1 vs. uniprot
Match: A0A0S3RP68_PHAAN (PPIase cyclophilin-type domain-containing protein n=7 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3RP68_PHAAN)

HSP 1 Score: 103 bits (256), Expect = 7.900e-20
Identity = 54/117 (46.15%), Postives = 79/117 (67.52%), Query Frame = 1 
Query:    1 QITGNTIFNALRMGDVDTDKDDRPLEPPRLISVEVLLNPFDDIIPRNLTATAXXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDARASSVRGVKSAHDILDDEKFSKD 351
            ++TG+T++N LR+G+V+TDK+DRPL+PP+++SVEVL NPF+DI+PR L  +                    G K   LLSFGEEA++EEKEL   AS  + +KS+HD+L+D +  K+
Sbjct:  133 KVTGDTMYNLLRLGEVETDKNDRPLDPPKILSVEVLWNPFEDIVPRTLQKSRTESRVDTESKEPKKK----GVKKLNLLSFGEEAEEEEKEL---ASVKQKIKSSHDVLNDPRLLKE 242
[Close]
BLAST of mRNA_H-paniculata_contig14078.2491.1 vs. uniprot
Match: A0A822ZT11_NELNU (PPIase cyclophilin-type domain-containing protein n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822ZT11_NELNU)

HSP 1 Score: 103 bits (256), Expect = 8.440e-20
Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 1 
Query:    1 QITGNTIFNALRMGDVDTDKDDRPLEPPRLISVEVLLNPFDDIIPRNLTATAXXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDARASSVRGVKSAHDILDDEKFSKD 351
            ++TG++IFN LR+GD++TDK+DRPL+PPR++SVEVL NPFDDI+PR  +  +                     K   LLSFGEEA++EEKEL   A+    +KS+HD+L+D +  K+
Sbjct:  133 KVTGDSIFNLLRLGDIETDKNDRPLDPPRILSVEVLWNPFDDIVPRQASGKSLPYSTTDSESRDQKKKAV---KKLNLLSFGEEAEEEEKEL---ATIKEKIKSSHDVLNDPRLLKE 243
[Close]
BLAST of mRNA_H-paniculata_contig14078.2491.1 vs. uniprot
Match: A0A6P4AU54_ZIZJJ (peptidyl-prolyl cis-trans isomerase CYP57-like n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4AU54_ZIZJJ)

HSP 1 Score: 102 bits (255), Expect = 1.070e-19
Identity = 58/124 (46.77%), Postives = 80/124 (64.52%), Query Frame = 1 
Query:    1 QITGNTIFNALRMGDVDTDKDDRPLE-PPRLISVEVLLNPFDDIIPRNLTATAXXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDARASSVRGVKSAHDILDDEKFSKDAAYDVD 369
            ++TG++I+N  R+GD++TDKDDRPLE PP+++SVEVL NPFDDI+PR     A                     K   LLSFGEEA++EEKEL   A+  + +KS+HD+LDD +  K+A  +VD
Sbjct:  133 KVTGDSIYNLARLGDIETDKDDRPLEQPPKILSVEVLWNPFDDIVPR-----APSKPSLESASETDKDTKKKAVKKLNLLSFGEEAEEEEKEL---AAVRKKIKSSHDVLDDPRLLKEAIPEVD 248
[Close]
BLAST of mRNA_H-paniculata_contig14078.2491.1 vs. uniprot
Match: A0A834TAG6_9FABA (Peptidyl-prolyl cis-trans isomerase CYP57 isoform X2 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834TAG6_9FABA)

HSP 1 Score: 102 bits (253), Expect = 1.620e-19
Identity = 54/118 (45.76%), Postives = 77/118 (65.25%), Query Frame = 1 
Query:    1 QITGNTIFNALRMGDVDTDKDDRPLEPPRLISVEVLLNPFDDIIPRNLTATAXXXXXXXXXXXXXXXXXXXGKKDFKLLSFGEEADQEEKELDARASSVRGVKSAHDILDDEKFSKDA 354
            ++TG+T++N LR+G+++TDK+DRPL+PP++ SVEVL NPFDDI+PR +                         K   LLSFGEEA++EEKEL   AS  + +KS+HD+LDD +  K+A
Sbjct:  133 KVTGDTLYNLLRLGELETDKNDRPLDPPKIFSVEVLWNPFDDIVPRTVQPQIQTSTDTDNKDSKKKTV-----KKLNLLSFGEEAEEEEKEL---ASLKQKIKSSHDVLDDPRLLKEA 242
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14078.2491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K904_9PHAE1.570e-12857.64PPIase cyclophilin-type domain-containing protein ... [more]
A0A835YS24_9STRA1.670e-7040.26Cyclophilin-type peptidyl-prolyl cis-trans isomera... [more]
A0A1V9ZJ55_9STRA2.660e-2227.94Peptidyl-prolyl cis-trans isomerase CWC27-like n=1... [more]
A0A2R6WA55_MARPO2.690e-2128.73PPIase cyclophilin-type domain-containing protein ... [more]
S8D7H0_9LAMI9.460e-2146.83PPIase cyclophilin-type domain-containing protein ... [more]
A0A2P5DEN8_PARAD1.370e-2043.87Cyclophilin-type peptidyl-prolyl cis-trans isomera... [more]
A0A0S3RP68_PHAAN7.900e-2046.15PPIase cyclophilin-type domain-containing protein ... [more]
A0A822ZT11_NELNU8.440e-2046.15PPIase cyclophilin-type domain-containing protein ... [more]
A0A6P4AU54_ZIZJJ1.070e-1946.77peptidyl-prolyl cis-trans isomerase CYP57-like n=2... [more]
A0A834TAG6_9FABA1.620e-1945.76Peptidyl-prolyl cis-trans isomerase CYP57 isoform ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14078contigH-paniculata_contig14078:1162..6665 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score418.3
Seed ortholog evalue5.2e-114
Seed eggNOG ortholog2880.D8LFJ0
Preferred namecwc27
KEGG koko:K12737
Hectar predicted targeting categoryother localisation
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0885@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03041,ko03110
Exons4
Model size1553
Cds size1551
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14078.2491.1prot_H-paniculata_contig14078.2491.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14078 1164..6665 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929121.2738469-CDS-H-paniculata_contig14078:1163..15381622929121.2738469-CDS-H-paniculata_contig14078:1163..1538Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14078 1164..1538 -
1691480738.935377-CDS-H-paniculata_contig14078:1163..15381691480738.935377-CDS-H-paniculata_contig14078:1163..1538Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14078 1164..1538 -
1622929121.29017-CDS-H-paniculata_contig14078:3599..37791622929121.29017-CDS-H-paniculata_contig14078:3599..3779Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14078 3600..3779 -
1691480738.9454327-CDS-H-paniculata_contig14078:3599..37791691480738.9454327-CDS-H-paniculata_contig14078:3599..3779Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14078 3600..3779 -
1622929121.3067718-CDS-H-paniculata_contig14078:5102..56331622929121.3067718-CDS-H-paniculata_contig14078:5102..5633Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14078 5103..5633 -
1691480738.9533808-CDS-H-paniculata_contig14078:5102..56331691480738.9533808-CDS-H-paniculata_contig14078:5102..5633Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14078 5103..5633 -
1622929121.3231957-CDS-H-paniculata_contig14078:6200..66651622929121.3231957-CDS-H-paniculata_contig14078:6200..6665Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14078 6201..6665 -
1691480738.963105-CDS-H-paniculata_contig14078:6200..66651691480738.963105-CDS-H-paniculata_contig14078:6200..6665Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14078 6201..6665 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14078.2491.1

>prot_H-paniculata_contig14078.2491.1 ID=prot_H-paniculata_contig14078.2491.1|Name=mRNA_H-paniculata_contig14078.2491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=517bp
QITGNTIFNALRMGDVDTDKDDRPLEPPRLISVEVLLNPFDDIIPRNLTA
TASASSAEAAAAAEKKKKRKKGKKDFKLLSFGEEADQEEKELDARASSVR
GVKSAHDILDDEKFSKDAAYDVDAVRAAEAVAEVAERGARKGEELRTAVK
TAAAAKKSKRQTAVAAAAEGGGQNSGDETEKNRKRRLHPQAFDDGTAFMN
KMRAKMVEKAKLLEGKGASSTSAATKAPTPTAPQPSSSSRRGSTGREMEN
DQVDFEGEEEETEIKKGEKGVASGGGDTEGGWAGGDETDKERARRKAIKE
RAKEYESRREELKAKHGAARVMTGEERVKYDAEHQHREMLSPVEQMRAKF
KKRRKEAGSREDSTLAKLAKFTSTIRTTKKLASVDDKKAEKKVVEAYHGQ
VTEGKLYEGDDDADDDQGWFTGALKFKKHIDDDLRRGSDGRNADDYAVID
PLKQGARHADAVGARHSGVPGGAGNGSSGRANGGHTSKKNDYSGGGGGEG
DNGRGGRRRGGRDGDRR
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mRNA from alignment at H-paniculata_contig14078:1162..6665-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14078.2491.1 ID=mRNA_H-paniculata_contig14078.2491.1|Name=mRNA_H-paniculata_contig14078.2491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5504bp|location=Sequence derived from alignment at H-paniculata_contig14078:1162..6665- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATTACAGGAAACACGATTTTCAACGCTCTGCGCATGGGAGACGTCGA
CACGGACAAGGATGACCGCCCGCTGGAACCCCCCCGCCTGATCTCTGTAG
AAGTTCTCCTGAACCCCTTCGACGACATCATCCCTAGGAATCTCACCGCA
ACCGCGTCCGCTTCGTCGGCGGAAGCCGCAGCCGCCGCCGAGAAGAAAAA
AAAACGAAAAAAGGGGAAGAAAGACTTCAAGCTGTTGTCATTCGGGGAGG
AGGCCGATCAGGAGGAGAAGGAACTGGATGCTCGGGCGTCGAGCGTGCGA
GGAGTGAAGAGCGCGCACGATATTCTCGACGACGAGAAATTTAGCAAGGA
TGCGGCGTACGATGTGGACGCGGTGCGGGCGGCGGAGGCGGTGGCGGAGG
TGGCGGAGCGTGGCGCACGTAAAGGGGAGGAGTTGCGAACGGCGGTCAAG
ACGGCGGCGGCGGCCGTGTCTGGAAGTACTGTCGCTGCTGTAGCCTCGGA
AGACGAGAAGTGAGCGTCTTTTGTTTGGTGTGTTTGGTGCGTTCATGTTT
GTTGATCTTGGAGGTGTATTGTTGATATTAGTAGTTGGTAGTTGATATTT
GATAACTTGAAAAAGACCTCTTGGGAGATTGGATTAGCTCCTTCTGCAGT
GTGTACGTCGGTGTACTTACTGTAAAGAATAGTGATGGCGAATTTGTTTT
TGCGGTGGTTGTAGTGGCGGGAGAGGAGTTTGAGTGATCCATCAATGCAT
CATTTCGGACTGTGTGTTCAGAAAAGTGGCATTATTGTTGTTGTTGTTGC
TTGGTACAGTTGACTATCTTCGAGAGACTTGCTAGGTGAAAGAACTCGAT
ATCTTGAAAATACGCACCCAAATGGGAGCCACGAAGCTACCGACGGTGTG
GGCGCCAGACGCAGGCGCGTGGTGTTTTTTTTTTATTGTGGGATATCGAT
CCCGTCTGTTGTTTCCTGGTGTCGGTTGCATGCCTTGCACCTTCCTCTCT
CTGTGTCGGATAAACGCAGGGGCCACCAAAAGAAAAAGAGTAAGCGACAA
ACAGCAGTAGCAGCAGCTGCGGAGGGAGGTGGACAAAATTCTGGCGATGA
GACAGAAAAAAATCGAAAACGGCGGTTACATCCGCAAGCATTTGACGACG
GAACCGCGTTCATGAACAAAATGCGGGCGAAAATGGTGGAAAAAGCGAAG
CTCCTGGAAGGGAAAGGGGCTTCTTCGACCTCAGCGGCTACTAAGGCACC
AACACCAACAGCACCACAACCATCGTCGTCATCCCGACGGGGGAGCACCG
GCAGAGAAATGGAAAACGACCAAGTGGATTTTGAAGGAGAGGAGGAAGAG
ACGGAGATAAAGAAAGGGGAGAAAGGGGTTGCAAGCGGAGGCGGGGATAC
GGAAGGTGGTTGGGCAGGCGGGGACGAGACCGACAAAGAACGGGCTCGGC
GGAAGGCCATCAAAGAGCGAGCGAAGGAGTATGAGTCTCGTCGCGAGGAG
CTCAAGGCGAAGCATGGGGCGGCCAGGGTTATGACGGGAGAGGAAAGGGT
GAAATACGATGCGGTGAGACTGTCTTTTTTGCTTCCAACCCTTTGACCGT
GACGGGCGCATTTTTTCGGTTCCCGTATTCATGACTGAACAGCTTCGTAA
TTACGATCTTACTGCGAAAGCTTTTGACTGATGTTTTGTGTTGGGATTGA
TTTTTGCTCCATCAAAAATAGCAGGAGCTCTTCCGCCCAAAAATGTGACG
CTCTGAAATAAGGTTGATATTTATCCTCCTTTTTCGCCCTTTTTATTCGC
GGAAACATTTTTTTGTTTTCCCAGTTTTAGGTTTTTTGTCATCGCTATTC
TCAGCTGCACTGCGCTAACCAGTGTGATTAACGGGGGGGGGGGGGGGTGT
TGTCGTCATCGCGTCGGCGTGCAACGCCCCGCTTTTAGAGGGAGACCGTG
CGTGTTGGCGTGGTCCTCTGACGAGAGCGCGTTTGTTCTCTTCCAGTATT
CTAATCTGTTCACGTCTTTCTGAACCTCTTTCAATGCTGGCCTCTCGTTC
TCGTTCCTCCGATAACCAAGGCTTAAACGTCGAATGTAGGAGCGTTGTCC
GGCGAAGTATACAGGAAGCAGTGAACCTTTTCTTACGTTATCCAATGTGT
GAGATTTGTCTAGAAATGTATATATATATATATGAACAGATACAAGAACA
AGAGAACACAGAGAAGTTGGAGTGGACCGTTTTGGTTCCCGGACGAAAGA
CTTCCACCGTTAGGTGCCTTGAAAACACGCCAGTTTTTCAGGTTCCCCGT
CCTGTACAATACTCTAATGGTGTACCGCGCTTTCTTCTTGCACAGTATTT
ATTTACCAGAAGAGAGAATATTCGGCAATCTACGAAGTGACACGGCTCCT
GTTTAGGGAGTCGACGTAGTTGCGTGGGTCATGGGCTCTATGGAGATGGG
TACGGTGAAAAAATCATTGACTACACCGGCGTGCCGTAGGGCTTCATGAA
TATACCCGTAGGGAGCGGTGTAAACACCCCTGGGGCTTTTTTCTCCGAAT
CGATTTTATCGGCAGCAAACTCTACGTGAGTTCAATTAATTGAGATTTCC
ACCGACGACGCGTTTTTCCAAAAAATGGATATCTCGATAATAGCGAGAGA
GCCTGCAATGTCGAAAGAGTACGTGTATCTCATCGCAGGTATATCTGGAC
GAGATATATCGAACGGCACAGCTTTCCGTGTCACGAGTTCCAGCGTTGTT
GCAAAATCGACTGAAGAGTTGGTTGTACACCTTGCATGCACACTACTGTA
GACTAGACGAAAGTACAAACAGAAGCCGTGGCCAACACTGGTGTGCTCAA
TACCCCTGAACGTATAACCTCATCGTTGCCCCGCAGGAGCACCAGCATCG
AGAAATGTTGTCCCCGGTGGAGCAGATGCGCGCCAAGTTCAAGAAGCGAC
GGAAAGAAGCCGGGAGCAGAGAGGACTCGACTCTGGCAAAACTCGCCAAA
TTCACGTCCACCATCCGAACCACCAAAAAGTTAGCCTCTGTCGACGACAA
AAAGGCGGAAAAAAAGGTGGGCACGATCGAGCGAGGGAGTGAGTTTCTTC
GTTTTTGTTCTTTTTGTCGTCTAAAATTTCGGGGATCGTGTTTTTTTTTT
TTTTCCAAATGAATTTTCAAACGAATATATATATATACATATATAATTTT
TCTGTGTTAAGACTATATGTTTATCTTAGGAACGAAAAATGAAAACAAAA
AACGTAGGCAGCTTACATCTGGGAACTGTTGCTTCCCCCGCCCCCAAGAT
ATAGAGCATCAAAAGCCGCTAAAAGAAATGTTTACCTCCTCAGACGGCCA
CAGATTAGTGTCAAGCAATCCCCACTTCCGTCAACCCCAAACAAACCTCT
CGCAAAGGTGCCGGTTGCTTTGTATCTGTTGCTCAGGGGTTGCTGTACGG
ATGGGAGGGTCACACACACGATGGTGGCAGTTAATACACACTCGTCGCTC
TTTGCACACAACAGCGATCACACGTATTACGCGGCCGACACAGCCGAGCT
AGATGCACGATGCCGATGTGATATCTTCGGGGTTTGCAGCCTTATAGCAG
CTCAAGACTTCGTCATCTTGGCGCAGCCATCCCACAAGATATCCCAACAA
AAGTCGTTGGTTGTAGTACCCAAAAATTCCCAATTGCCCTTTTTCGCCCA
AAATTTGCACCCCCCGGACAACAACGAATAATTGGCGTATTCGCCACAAA
AAAAAAAAAAGTACTCGCCCGAATTTCAGAATGAGCTCATGTATTTTATG
TGCCCCAGACCATCCACGATTGCTAATTACGCTGAAAATCGAACGGACTG
GGGTCGGTACTTTATTCTATGTGTCCGCTCATTCTGAAACTCAGGCGAAT
ACTTTTCAATTTTTGTTGTCGAGTATGCCAATTATTCGTATTTGCCGCGG
GGGTGAAAAATTGCCATTTTTTTTCAAGTTGTCACAAGGCGAACAGATAT
TTTTTTCCATATGGGATAGTTCGAGCTGTGCAAAAATGGCGGCACATGGG
GGGGTTTCAGCTTTTGCAGGGCTCCTTTCATGCTCCCGCCACTGTCATTG
ATGGCCACGACTGAGATTAAGATCCCGCCGCCAACTAGAAGCACGCTCCG
CGGAATCGCCACTTGCAGCATGTTTTGACGTGGAATACATCAAGCATAGG
CCGAAGTCGATCGGCAACGAGCATATAATACCCAGTCGGCCTAGTTTGGC
ACCTCGTAAGGTGGGCAAGAAAAAATGCATTACTCTACCTTCCAATTTAT
TTCGGACTACTGCATTTTTTTTTTTTCTTGTGTTGAAGCCCAATTGACAG
AGATGAAGAACACTGCCAGGCAGTTTTTTTGCTGCGACAATCAAGTGGTC
TTGCAACGTTGTTTCTTTCTTTGCCACGTTTTTTGTGAATTGATTTTGTT
CGGCTTCTTTCAACGAGGTTCAGCTGGATTCGGGGCGGGTAGGCTTGTAT
GGCTCCGCGAGGATTTTTTTCGCTGCAAATTTCTTAGGAGGAAATTTTGG
CAGTAACTTACAGATGCACAAAGAAATCAAAATAAAACATCCTTGTCGTA
GCTGACTAGTGCCGTTGGGACGTATGAAAGCGAAAATCTAGCAACTCACA
AAATGTAGTATAAAACCTCAAAGTCAGTGCTGACCCGACACATACACGAA
ATGGGTACTGGCATGAGTTTTCCAGAGTAATGTGTTTCGGGGCACGTGCT
CTTTGGCAAATTACTATTTTTGGGAATCGGTAGAAATAGTTGAATGTCGT
TTGTGGCAGCTCGACAGTACCGTGGTGAGGTAAACATTTTGCTGTGGGGT
TTCCTAAGGGAGCATCGGGGGTTAGGTTCTTCCCACACATGAAGTAGTTT
CTCATGTCTCTCTTGCTTCCCGAAAACGTCCTTCACTAGAGAAGACGAAG
GATCGATAAAGAACAGCCGGCGGCTTCATCTCCTTCTTTTCGTTTCCAAC
TTTGGTGGAAAAGGCCCACCAACGGCACCTGTTCCAGGGGGAAAACGGAA
GCGATCATCAAATCAATGGACCCCTCCCCTCTCCTCTCTCGTTTGAAAAC
GAAAACCACATTTTGTTTTCTCAACAGGTAGTGGAGGCCTATCACGGACA
AGTGACGGAAGGAAAATTGTACGAAGGCGACGATGACGCGGATGACGACC
AAGGTTGGTTCACGGGGGCGCTAAAGTTCAAGAAGCACATTGACGACGAC
CTCCGAAGGGGCAGTGATGGCCGCAACGCGGACGACTATGCCGTCATCGA
CCCCCTCAAACAGGGAGCACGACACGCAGACGCCGTCGGTGCCCGCCATT
CTGGAGTGCCAGGTGGTGCCGGCAACGGCTCCAGCGGACGGGCAAACGGG
GGACATACAAGCAAAAAAAATGACTACAGCGGGGGCGGCGGCGGAGAGGG
TGATAATGGCCGAGGAGGAAGGAGGAGAGGAGGGCGGGATGGGGACCGAC
GTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig14078:1162..6665-

>mRNA_H-paniculata_contig14078.2491.1 ID=mRNA_H-paniculata_contig14078.2491.1|Name=mRNA_H-paniculata_contig14078.2491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3102bp|location=Sequence derived from alignment at H-paniculata_contig14078:1162..6665- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATTACAGGAAACACGATTTTCAACGCTCTGCGCATGGGAGACGTCGA
CACGGACAAGGATGACCGCCCGCTGGAACCCCCCCGCCTGATCTCTGTAG
AAGTTCTCCTGAACCCCTTCGACGACATCATCCCTAGGAATCTCACCGCA
ACCGCGTCCGCTTCGTCGGCGGAAGCCGCAGCCGCCGCCGAGAAGAAAAA
AAAACGAAAAAAGGGGAAGAAAGACTTCAAGCTGTTGTCATTCGGGGAGG
AGGCCGATCAGGAGGAGAAGGAACTGGATGCTCGGGCGTCGAGCGTGCGA
GGAGTGAAGAGCGCGCACGATATTCTCGACGACGAGAAATTTAGCAAGGA
TGCGGCGTACGATGTGGACGCGGTGCGGGCGGCGGAGGCGGTGGCGGAGG
TGGCGGAGCGTGGCGCACGTAAAGGGGAGGAGTTGCGAACGGCGGTCAAG
ACGGCGGCGGCGGCCCAGATTACAGGAAACACGATTTTCAACGCTCTGCG
CATGGGAGACGTCGACACGGACAAGGATGACCGCCCGCTGGAACCCCCCC
GCCTGATCTCTGTAGAAGTTCTCCTGAACCCCTTCGACGACATCATCCCT
AGGAATCTCACCGCAACCGCGTCCGCTTCGTCGGCGGAAGCCGCAGCCGC
CGCCGAGAAGAAAAAAAAACGAAAAAAGGGGAAGAAAGACTTCAAGCTGT
TGTCATTCGGGGAGGAGGCCGATCAGGAGGAGAAGGAACTGGATGCTCGG
GCGTCGAGCGTGCGAGGAGTGAAGAGCGCGCACGATATTCTCGACGACGA
GAAATTTAGCAAGGATGCGGCGTACGATGTGGACGCGGTGCGGGCGGCGG
AGGCGGTGGCGGAGGTGGCGGAGCGTGGCGCACGTAAAGGGGAGGAGTTG
CGAACGGCGGTCAAGACGGCGGCGGCGGCCAAAAAGAGTAAGCGACAAAC
AGCAGTAGCAGCAGCTGCGGAGGGAGGTGGACAAAATTCTGGCGATGAGA
CAGAAAAAAATCGAAAACGGCGGTTACATCCGCAAGCATTTGACGACGGA
ACCGCGTTCATGAACAAAATGCGGGCGAAAATGGTGGAAAAAGCGAAGCT
CCTGGAAGGGAAAGGGGCTTCTTCGACCTCAGCGGCTACTAAGGCACCAA
CACCAACAGCACCACAACCATCGTCGTCATCCCGACGGGGGAGCACCGGC
AGAGAAATGGAAAACGACCAAGTGGATTTTGAAGGAGAGGAGGAAGAGAC
GGAGATAAAGAAAGGGGAGAAAGGGGTTGCAAGCGGAGGCGGGGATACGG
AAGGTGGTTGGGCAGGCGGGGACGAGACCGACAAAGAACGGGCTCGGCGG
AAGGCCATCAAAGAGCGAGCGAAGGAGTATGAGTCTCGTCGCGAGGAGCT
CAAGGCGAAGCATGGGGCGGCCAGGGTTATGACGGGAGAGGAAAGGGTGA
AATACGATGCGAAAAAGAGTAAGCGACAAACAGCAGTAGCAGCAGCTGCG
GAGGGAGGTGGACAAAATTCTGGCGATGAGACAGAAAAAAATCGAAAACG
GCGGTTACATCCGCAAGCATTTGACGACGGAACCGCGTTCATGAACAAAA
TGCGGGCGAAAATGGTGGAAAAAGCGAAGCTCCTGGAAGGGAAAGGGGCT
TCTTCGACCTCAGCGGCTACTAAGGCACCAACACCAACAGCACCACAACC
ATCGTCGTCATCCCGACGGGGGAGCACCGGCAGAGAAATGGAAAACGACC
AAGTGGATTTTGAAGGAGAGGAGGAAGAGACGGAGATAAAGAAAGGGGAG
AAAGGGGTTGCAAGCGGAGGCGGGGATACGGAAGGTGGTTGGGCAGGCGG
GGACGAGACCGACAAAGAACGGGCTCGGCGGAAGGCCATCAAAGAGCGAG
CGAAGGAGTATGAGTCTCGTCGCGAGGAGCTCAAGGCGAAGCATGGGGCG
GCCAGGGTTATGACGGGAGAGGAAAGGGTGAAATACGATGCGGAGCACCA
GCATCGAGAAATGTTGTCCCCGGTGGAGCAGATGCGCGCCAAGTTCAAGA
AGCGACGGAAAGAAGCCGGGAGCAGAGAGGACTCGACTCTGGCAAAACTC
GCCAAATTCACGTCCACCATCCGAACCACCAAAAAGTTAGCCTCTGTCGA
CGACAAAAAGGCGGAAAAAAAGGAGCACCAGCATCGAGAAATGTTGTCCC
CGGTGGAGCAGATGCGCGCCAAGTTCAAGAAGCGACGGAAAGAAGCCGGG
AGCAGAGAGGACTCGACTCTGGCAAAACTCGCCAAATTCACGTCCACCAT
CCGAACCACCAAAAAGTTAGCCTCTGTCGACGACAAAAAGGCGGAAAAAA
AGGTAGTGGAGGCCTATCACGGACAAGTGACGGAAGGAAAATTGTACGAA
GGCGACGATGACGCGGATGACGACCAAGGTTGGTTCACGGGGGCGCTAAA
GTTCAAGAAGCACATTGACGACGACCTCCGAAGGGGCAGTGATGGCCGCA
ACGCGGACGACTATGCCGTCATCGACCCCCTCAAACAGGGAGCACGACAC
GCAGACGCCGTCGGTGCCCGCCATTCTGGAGTGCCAGGTGGTGCCGGCAA
CGGCTCCAGCGGACGGGCAAACGGGGGACATACAAGCAAAAAAAATGACT
ACAGCGGGGGCGGCGGCGGAGAGGGTGATAATGGCCGAGGAGGAAGGAGG
AGAGGAGGGCGGGATGGGGACCGACGTGTAGTGGAGGCCTATCACGGACA
AGTGACGGAAGGAAAATTGTACGAAGGCGACGATGACGCGGATGACGACC
AAGGTTGGTTCACGGGGGCGCTAAAGTTCAAGAAGCACATTGACGACGAC
CTCCGAAGGGGCAGTGATGGCCGCAACGCGGACGACTATGCCGTCATCGA
CCCCCTCAAACAGGGAGCACGACACGCAGACGCCGTCGGTGCCCGCCATT
CTGGAGTGCCAGGTGGTGCCGGCAACGGCTCCAGCGGACGGGCAAACGGG
GGACATACAAGCAAAAAAAATGACTACAGCGGGGGCGGCGGCGGAGAGGG
TGATAATGGCCGAGGAGGAAGGAGGAGAGGAGGGCGGGATGGGGACCGAC
GT
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