mRNA_H-paniculata_contig14058.2480.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14058.2480.1 vs. uniprot
Match: D8LDY2_ECTSI (Protein CASP n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDY2_ECTSI) HSP 1 Score: 231 bits (589), Expect = 8.030e-68 Identity = 157/272 (57.72%), Postives = 175/272 (64.34%), Query Frame = 1 Query: 1 LPQVIRGRVRRLEADLSSSQRLAEERKSQISSLQHXXXXXXXXXXXXXXXXXXLEDDLKKLSSVVGGGGGVIEG-DNAQALRELLGVGXXXXXXXXXXXXRV----DRGVLGIVQAQRDRFRRRIKELEAEREDEQREARAAQGVMESLQRDNLQLYEKVRFLQSYQRGSPGQRETSRLLPKE-MEEGIG---------------VGEGTRRAVSNPTEARYGKMYETGINPFTQFSQRERQRKYQELSVAEKITLSTTRMFLGNKFARYVV 753 + QVIRGRVRRLEADL+SS+RLAEER + + LQ LEDDL + G G + A ALRELLGVG XXXX + GVLGIVQAQRDRFRRRIK+LEAEREDEQRE RAAQGVME+LQRDNLQLYEKVRFLQSYQRG+ G + + L + GIG EG TEARYG++YE INPFTQFSQRERQRKYQEL+VAEKITL+TTRMFLGNKFAR V Sbjct: 384 MEQVIRGRVRRLEADLTSSRRLAEERGADAARLQRALDSATALASERLETINRLEDDLATAAGGXXXXAGTPRGGEGADALRELLGVGEAEGGPAGXXXXXXADAGNHGVLGIVQAQRDRFRRRIKKLEAEREDEQRETRAAQGVMENLQRDNLQLYEKVRFLQSYQRGATGADKNNVLAAAGGVTPGIGDVEAGGXXXXXXXGAAREGEEGGSRKATEARYGQLYEARINPFTQFSQRERQRKYQELTVAEKITLNTTRMFLGNKFARNFV 655
BLAST of mRNA_H-paniculata_contig14058.2480.1 vs. uniprot
Match: A0A6U0ZB21_9STRA (Protein CASP n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZB21_9STRA) HSP 1 Score: 122 bits (306), Expect = 5.350e-28 Identity = 79/147 (53.74%), Postives = 96/147 (65.31%), Query Frame = 1 Query: 313 VLGIVQAQRDRFRRRIKELEAEREDEQREARAAQGVMESLQRDNLQLYEKVRFLQSYQRGSPGQRETSRLLPKEMEEGIGVGEGTRRAVSNPTEARYGKMYETGINPFTQFSQRERQRKYQELSVAEKITLSTTRMFLGNKFARYVV 753 +L IVQAQRDRF RRIK+LE ER R++ + E L+RDNL+LYEK+R+LQSY +SR + + G G A TEA+Y MY+ NPFTQFSQ ERQR+Y ELSVAEKITL+TTRMFL +KFAR V Sbjct: 576 MLSIVQAQRDRFVRRIKDLEEERAALTRQSGQERQTAEQLKRDNLKLYEKIRYLQSY---------SSRAVSSPALRALEAG-GDLEAAG--TEAKYKSMYDAQNNPFTQFSQMERQRRYGELSVAEKITLNTTRMFLSSKFARTFV 710
BLAST of mRNA_H-paniculata_contig14058.2480.1 vs. uniprot
Match: A0A7S2Y0X4_9STRA (Protein CASP n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0X4_9STRA) HSP 1 Score: 110 bits (275), Expect = 8.200e-26 Identity = 68/150 (45.33%), Postives = 97/150 (64.67%), Query Frame = 1 Query: 313 VLGIVQAQRDRFRRRIKELEAEREDEQREARAAQGVMESLQRDNLQLYEKVRFLQSYQRGSPGQRETSRLLP-----KEMEEGIGVGEG-TRRAVSNPTEARYGKMYETGINPFTQFSQRERQRKYQELSVAEKITLSTTRMFLGNKFAR 744 +L IVQAQRDRFR R++ELEA+++ E + E LQ+DNL LYEK+RFLQ+++ S + ++ L + MEEG G G G + + + RY ++YET ++PF QFSQ ERQRKY ELS+ +K+TLS+ R+ L + F R Sbjct: 8 MLRIVQAQRDRFRARMQELEADKQQLLAELLQEKSGAEQLQKDNLALYEKIRFLQTFRSSSATKASSASPLRGNRAVRRMEEGQGPGGGGSPLPGAGDLDVRYSQLYETRLSPFAQFSQTERQRKYAELSLPDKVTLSSARIVLSSSFGR 157
BLAST of mRNA_H-paniculata_contig14058.2480.1 vs. uniprot
Match: W7U6B2_9STRA (Protein CASP n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6B2_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.980e-23 Identity = 75/166 (45.18%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 322 IVQAQRDRFRRRIKELEAEREDEQREARAAQGVMESLQRDNLQLYEKVRFLQSYQRGSPGQRETSRLLPKEM---------------EEGIGVGEGTRRAVSNPT-------EARYGKMYETGINPFTQFSQRERQRKYQELSVAEKITLSTTRMFLGNKFARYVV 753 I+QAQRDR++ R +ELE ++E+ + ES+ RDNL+LYEKVRFLQSY++G G K M +EG G E A PT EARY MYE +NPFT FS ER RKYQ+LSV +KITL TTR FL +K AR V Sbjct: 118 ILQAQRDRYKARTRELEGRLAAVEQESGRHKAQAESMLRDNLKLYEKVRFLQSYKKGRVGPDALDSTQDKRMSGLEHSTLHQRNVVNDEGKGAQEYALEAGRVPTGAGAAATEARYRAMYEEQMNPFTAFSVAERVRKYQDLSVIDKITLQTTRAFLAHKKARMAV 283
BLAST of mRNA_H-paniculata_contig14058.2480.1 vs. uniprot
Match: F0ZWT2_DICPU (Protein CASP n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZWT2_DICPU) HSP 1 Score: 103 bits (257), Expect = 2.140e-23 Identity = 60/157 (38.22%), Postives = 99/157 (63.06%), Query Frame = 1 Query: 313 VLGIVQAQRDRFRRRIKELEAEREDEQREARAAQGVMESLQRDNLQLYEKVRFLQSYQR-------------GSPGQRETSRLLPKEMEEGIGVGEGTRRAVSNPTEARYGKMYETGINPFTQFSQRERQRKYQELSVAEKITLSTTRMFLGNKFAR 744 +L IV QRDRF+ +I EL E+ +++ ++ +SL+ DN++LYEK+RFLQSY + G+ G+R ++R ++E G+ V G+ TE RYGK+YE INPF F+++E+ R+Y+E++ AE++ L+++R FL NK++R Sbjct: 1 MLEIVIGQRDRFKAKIDELGIEKSKLEKQLETSRQETQSLKNDNIKLYEKIRFLQSYDKNKSGGNNSGSINIGAGGKRSSNRDT-YDIERGVDVSSGSNNG-GPETEERYGKLYEESINPFLSFNKKEKYRRYKEMNTAERVILNSSRFFLSNKYSR 155
BLAST of mRNA_H-paniculata_contig14058.2480.1 vs. uniprot
Match: A0A4D9DAN9_9STRA (Protein CASP n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAN9_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.980e-22 Identity = 74/166 (44.58%), Postives = 94/166 (56.63%), Query Frame = 1 Query: 322 IVQAQRDRFRRRIKELEAEREDEQREARAAQGVMESLQRDNLQLYEKVRFLQSYQRGSPG---------------------QRETSRLLPKEMEE-GIGVGEGTRRAVSNPTEARYGKMYETGINPFTQFSQRERQRKYQELSVAEKITLSTTRMFLGNKFARYVV 753 I+QAQRDR++ R +ELE ++E+ + ES+ RDNL+LYEKVRFLQSY++G G QR + KE +E + G A + TEARY MYE +NPFT FS ER RKYQ+LSV +KITL TTR FL +K AR V Sbjct: 669 ILQAQRDRYKARTRELEGRLAAVEQESGRHKAQAESMLRDNLKLYEKVRFLQSYKKGRVGPGALDSAQDKRMSGLEHSALHQRNVANDEGKEAQECALEAGRVPTGAGAAATEARYRAMYEEQMNPFTAFSVAERVRKYQDLSVIDKITLQTTRAFLAHKKARMAV 834
BLAST of mRNA_H-paniculata_contig14058.2480.1 vs. uniprot
Match: V4C7Q6_LOTGI (Protein CASP n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4C7Q6_LOTGI) HSP 1 Score: 96.7 bits (239), Expect = 5.220e-21 Identity = 60/149 (40.27%), Postives = 87/149 (58.39%), Query Frame = 1 Query: 304 DRGVLGIVQAQRDRFRRRIKELEAEREDEQREARAAQGVMESLQRDNLQLYEKVRFLQSYQRGSPGQRETSRLLPKEMEEGIGVGEGTRRAVSNPTEARYGKMYETGINPFTQFSQRERQRKYQELSVAEKITLSTTRMFLGNKFARYV 750 + +L IVQ+QR+R+R R +ELEA+ +Q++ Q M+ L+ DN++LYEK+RFLQSY +PG ME+G TE RY YE ++PF+ FS++E+QR+Y L +KITLS + +GNK AR V Sbjct: 9 ENSILPIVQSQRERYRIRAQELEAQTLSQQQQVTLLQNEMDKLRSDNVKLYEKIRFLQSYPTKTPGS----------MEDG--------------TEHRYSSQYEERLDPFSTFSRKEKQRRYMNLKPYDKITLSMGQFIMGNKVARTV 133
BLAST of mRNA_H-paniculata_contig14058.2480.1 vs. uniprot
Match: A0A2K1IEE4_PHYPA (Protein CASP n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IEE4_PHYPA) HSP 1 Score: 100 bits (250), Expect = 1.470e-20 Identity = 55/144 (38.19%), Postives = 91/144 (63.19%), Query Frame = 1 Query: 313 VLGIVQAQRDRFRRRIKELEAEREDEQREARAAQGVMESLQRDNLQLYEKVRFLQSYQRGSPGQRETSRLLPKEMEEGIGVGEGTRRAVSNPTEARYGKMYETGINPFTQFSQRERQRKYQELSVAEKITLSTTRMFLGNKFAR 744 +L ++ +QRDRFR R++E E E + +A +E + DN++LYEK+RF+Q Y + P + + + +++E G+ + E++Y KMYE INPFT FS++E++R+Y+EL + +KITL++ R LGNK+AR Sbjct: 523 MLTVICSQRDRFRTRLRETEEELRMARDRCQALTADLERSRADNVKLYEKMRFVQDYTQERPSKGRSGKKRGEDLESGV----------TGDVESKYKKMYEDDINPFTAFSKKEKERRYKELGIRDKITLTSGRFLLGNKYAR 656
BLAST of mRNA_H-paniculata_contig14058.2480.1 vs. uniprot
Match: A0A2H1CDV3_FASHE (Protein CASP n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1CDV3_FASHE) HSP 1 Score: 97.8 bits (242), Expect = 1.830e-20 Identity = 64/155 (41.29%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 301 VDRGVLGIVQAQRDRFRRRIKELEAEREDEQREARAAQGVMESLQRDNLQLYEKVRFLQSYQR--GSPGQRETSRLLPKEMEEGIGVGEGTRRAVSNPTEARYGKMYETGINPFTQFSQRERQRKYQELSVAEKITLSTTRMFLGNKFARYVVRS 759 +D +L IVQ QRDRFR R +ELE ++ A Q +E ++ DN++LYEK+RFLQSY GS + S + K ++ + V G S+PT +Y + YE ++PF QFS++E+QR YQ+L EKI L R+ LGN+ AR + S Sbjct: 116 LDASLLQIVQHQRDRFRARAEELEQTEASVRQHLTAVQRELELVRADNVKLYEKIRFLQSYSSPIGSRSELHPSNTVSKPSDDRVTVHLG-----SDPTVLKYSQAYEAHMDPFNQFSRQEKQRVYQDLKPYEKIMLGLGRLVLGNRRARLLAFS 265
BLAST of mRNA_H-paniculata_contig14058.2480.1 vs. uniprot
Match: A0A176WI88_MARPO (Protein CASP n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WI88_MARPO) HSP 1 Score: 100 bits (249), Expect = 1.980e-20 Identity = 59/144 (40.97%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 313 VLGIVQAQRDRFRRRIKELEAEREDEQREARAAQGVMESLQRDNLQLYEKVRFLQSYQRGSPGQRETSRLLPKEMEEGIGVGEGTRRAVSNPTEARYGKMYETGINPFTQFSQRERQRKYQELSVAEKITLSTTRMFLGNKFAR 744 +L ++ +QRDRFR+R++E E E + RA + +E + DN++LYEK+R++Q Y + P R R GE VS ++Y MYE INPFTQFS++E++R+Y+EL + +KITLS+ R LGNK+AR Sbjct: 519 MLDVICSQRDRFRQRLREAEEELRLVKERNRALEADLERSKADNVKLYEKIRYVQDYTQERPIPRGKKR------------GEDLESGVSVDIVSKYKNMYEEDINPFTQFSKKEKERRYKELGIRDKITLSSGRFLLGNKYAR 650 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14058.2480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14058.2480.1 >prot_H-paniculata_contig14058.2480.1 ID=prot_H-paniculata_contig14058.2480.1|Name=mRNA_H-paniculata_contig14058.2480.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=254bp LPQVIRGRVRRLEADLSSSQRLAEERKSQISSLQHSLDTALHLAEERLDAback to top mRNA from alignment at H-paniculata_contig14058:1021..6700- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14058.2480.1 ID=mRNA_H-paniculata_contig14058.2480.1|Name=mRNA_H-paniculata_contig14058.2480.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5680bp|location=Sequence derived from alignment at H-paniculata_contig14058:1021..6700- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14058:1021..6700- >mRNA_H-paniculata_contig14058.2480.1 ID=mRNA_H-paniculata_contig14058.2480.1|Name=mRNA_H-paniculata_contig14058.2480.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1524bp|location=Sequence derived from alignment at H-paniculata_contig14058:1021..6700- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |