mRNA_H-paniculata_contig14048.2473.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: D8LBR1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR1_ECTSI) HSP 1 Score: 463 bits (1192), Expect = 6.520e-151 Identity = 244/279 (87.46%), Postives = 260/279 (93.19%), Query Frame = 1 Query: 1 GWYVLATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPLPIIARKFPRPAPP 837 GWY LATSSEEQE+TLRLPDLATICLGY+VMS+MVFMWRGIINAIS RTN QIL +A+KAMRV AAVVKVGLLLSLKMLLLPLLLGVCLDATTL +FGC+GE R RFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHP++L+LIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALV MFVW PT+LV LFP VMPVQLELRYGMPQLQIPVELVILHLAMLAFLEK+QN+IGEMQH+WLVA CG LGLTR+VLP PI+AR PRP PP Sbjct: 685 GWYELATSSEEQENTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHSWLVAVCGRLGLTRFVLPQPIVAR-LPRPGPP 962
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A6H5JWM1_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM1_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 1.740e-148 Identity = 245/279 (87.81%), Postives = 259/279 (92.83%), Query Frame = 1 Query: 1 GWYVLATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPLPIIARKFPRPAPP 837 GWY LATSSEEQE+TLRLPDLATICLGY+VMS+MVFMWRGIINAIS RTN QIL +A+KAMRV AAVVKVGLLLSLKMLLLPLLLG CLDATTL +FGC+GE RVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPD+L+LIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALV MFVW PT+LV LFP VMPVQLELRYGMPQLQIPVELVILHLAMLAFLEK+QN+IGEMQH WLVA CG LGLTR+VLP PI+AR PRP PP Sbjct: 769 GWYELATSSEEQENTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGGCLDATTLPLFGCTGEARVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLPQPIVAR-LPRPGPP 1046
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A7S2RW40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW40_9STRA) HSP 1 Score: 328 bits (840), Expect = 2.050e-100 Identity = 174/262 (66.41%), Postives = 212/262 (80.92%), Query Frame = 1 Query: 16 ATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPLP 801 AT++ +++ TL+LPDL TI LGY+VMS M+FMWR ++A S+RT++Q++ + R + TAAVVKVG+LL LKMLLLPLLLGVCLDA TL++F S RV F AQ+LVGSLLLHWVLGITFMLFVTVSVLQLREV+HPD+ A IIRPQEPHPDLLGSLLQESG THARRM MSLAIY+ L+ +FV PT +V P +P++L L Y PQLQ+PVELVI HL++L FLE+ +N+IGE+QH WLV G LGLTRY+LPLP Sbjct: 539 ATTAAKEDHTLQLPDLGTIALGYLVMSCMIFMWRAAVSAASQRTSLQLMSRVRLILDCTAAVVKVGILLFLKMLLLPLLLGVCLDAATLRLFTASAAERVHFTAQNLVGSLLLHWVLGITFMLFVTVSVLQLREVLHPDIFAAIIRPQEPHPDLLGSLLQESGATHARRMIMSLAIYVFLLFVFVSLPTSMVLTWAPTAVPLELNLAYIAPQLQVPVELVIFHLSVLGFLERFKNRIGELQHIWLVRVSGALGLTRYLLPLP 800
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A7S2CYG7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CYG7_9STRA) HSP 1 Score: 303 bits (777), Expect = 1.010e-92 Identity = 162/263 (61.60%), Postives = 211/263 (80.23%), Query Frame = 1 Query: 13 LATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLV-ARLFPGVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPL 798 ++++++E++ TL+LPDL ++ LGY+VMS M+F WR I++A+ + T M ++ + R A+ TAAVVKVG+LL LKMLLLPLLLGVCLDA+TL VFG S + R+RF AQ+LVGSLLLHWVLGITFMLFVTVSVLQLREV+HPD+LA +IRPQ+PH LL+ESG THARRM MSLAIY+ L+ + V PT + A P ++PVQL+ Y +PQ Q+P+ELV+ HL++LAFLE+ +NKIGE+QHAWLV AC LGLT ++LPL Sbjct: 359 ISSTAQEEDHTLQLPDLFSMALGYLVMSLMIFTWRSIVSAVCQGTPMPLIGRIRLALDCTAAVVKVGILLFLKMLLLPLLLGVCLDASTLMVFGTSAKDRIRFTAQNLVGSLLLHWVLGITFMLFVTVSVLQLREVMHPDILASVIRPQDPHXXXXXXLLRESGGTHARRMVMSLAIYIMLLFLLVHLPTLVFQACAPPHILPVQLQFSYLLPQFQVPLELVMFHLSVLAFLERFKNKIGELQHAWLVRACRFLGLTHFLLPL 621
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: W7U493_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U493_9STRA) HSP 1 Score: 267 bits (682), Expect = 4.010e-80 Identity = 159/263 (60.46%), Postives = 188/263 (71.48%), Query Frame = 1 Query: 34 QEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRV---TAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPV-----QLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPL 798 +E TL+LPDL I LGY++MS MVF WR I+ A+ +R + L K +R+ TAAVVKVG+LL KM L PLLLG+ LDA T QV G RVRF ++LVG+LLLHWV GITFMLFVTVSVLQLREV+HPD+LA IIRPQEP PDLLGSLLQESG THARRMA+SL IY+ L+ +FV+ P +L+A F G L Y PQLQIP EL+I HLAMLAFLE +N IG +Q+ WL C LGLTRY+LPL Sbjct: 175 EEHTLQLPDLGVILLGYLLMSAMVFTWRTIVCAVCKRMAVTALPMLGKVVRMLECTAAVVKVGVLLFSKMALCPLLLGLWLDAATTQVIGPDHAVRVRFATENLVGALLLHWVAGITFMLFVTVSVLQLREVLHPDILARIIRPQEPQPDLLGSLLQESGLTHARRMAISLGIYVLLLLLFVYLPAELLA--FAGFNATGNGLFHLNFFYLAPQLQIPFELIIFHLAMLAFLEHTKNAIGRLQYMWLRPFCKALGLTRYLLPL 435
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A835YNH4_9STRA (RING-CH-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH4_9STRA) HSP 1 Score: 273 bits (698), Expect = 5.160e-80 Identity = 176/354 (49.72%), Postives = 211/354 (59.60%), Query Frame = 1 Query: 16 ATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISE---RTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARL--------------------------------------------FPGVMPVQ----------------LELRYGMPQLQIPVELVILHLAMLAFLEKHQ----------------NKIGEMQHAWLVAACGELGLTRYVLPLPIIARKFP-RPAPP 837 A++S ++ TL+L DL TICLGY ++ A R + L++AR+AMRV AAVVKVGLLLSLKMLLLPLLLG CLDA L +F S R+ F+ +L GSLLLHWV+GITFMLFVTVSVLQLREVVHPD+LA +IRPQEPHPDLLGSLLQESGRTHARRMAMSLAIY+AL+ +FVW P+++ AR PGV P L L+Y +PQLQ+P+ELV+ HLAMLAFLE+++ + IG QH WLV C LGLTRY+LPLPI+AR RPA P Sbjct: 701 ASASAAEDHTLQLADLLTICLGYAAEVCTPRAAARVLRACKRDRGRVAVLTLQRARRAMRVLAAVVKVGLLLSLKMLLLPLLLGACLDAAALPIFAASPADRLHFLRTNLAGSLLLHWVMGITFMLFVTVSVLQLREVVHPDVLAGVIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYVALLLLFVWVPSRIAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAALPGVPPAXXXXXXXXXXXXXXXXXLRLQYLVPQLQVPMELVVFHLAMLAFLERYKXXXXXXXXXXXXXXXXDSIGRTQHEWLVRWCQRLGLTRYLLPLPILARTLDGRPAGP 1054
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A4D9D1W8_9STRA (RING-CH-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W8_9STRA) HSP 1 Score: 266 bits (681), Expect = 9.920e-79 Identity = 158/263 (60.08%), Postives = 188/263 (71.48%), Query Frame = 1 Query: 34 QEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRV---TAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPV-----QLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPL 798 +E TL+LPDL I LGY++MS MVF WR I+ A+ +R + L K +R+ TAAVVKVG+LL KM L PLLLG+ LDA T QV G RVRF ++LVG+LLLHWV GITFMLFVTVSVLQLREV+HPD+LA IIRPQEP PDLLGSLLQESG THARRMA+SL IY+ L+ +FV+ P +L+A F G + Y PQLQIP EL+I HLAMLAFLE +N IG +Q+ WL C LGLTRY+LPL Sbjct: 388 EEHTLQLPDLGVILLGYLLMSAMVFTWRSIVCAVCKRMAVTALPMLGKVVRMLECTAAVVKVGVLLFSKMALCPLLLGLWLDAATTQVIGPDHAVRVRFATENLVGALLLHWVAGITFMLFVTVSVLQLREVLHPDILARIIRPQEPQPDLLGSLLQESGLTHARRMAISLGIYVLLLLLFVYLPAELLA--FAGFNATGTGLFHINFFYLAPQLQIPFELIIFHLAMLAFLEHTKNAIGRLQYMWLRPFCKVLGLTRYLLPL 648
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A7S1FWY8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWY8_9STRA) HSP 1 Score: 236 bits (602), Expect = 2.730e-67 Identity = 147/285 (51.58%), Postives = 187/285 (65.61%), Query Frame = 1 Query: 4 WYVLATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGII------------NAISERTNMQILRQARKAMRVT---AAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPG-VMP-VQLELRYGMP-QLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPLPI 804 W V +++ + L+LPDLATI GY M +F+ I+ N + E N A K V AA+ KV LL LKMLLLPL+LG LD TTL +F + + R++F +L G+LLLHWV GITFML VTVSVLQLREV+HPDLLA +IRPQEP PDLLG+LLQ+ THA+RM +SLAIY+AL+ +FVW P LV R+ +P ++L+ Y +P QLQ+PVEL + HL MLAFLEK++N IGEMQH WLV CG+LG+ VLPL + Sbjct: 380 WDVYEKAAQHHDSILQLPDLATILAGYFTMGVSIFVCHAILAYAVKKRKQATDNTLDEDENDTRWWVAMKMAGVAECFAAIFKVATLLFLKMLLLPLVLGAWLDITTLPLFQHTLDHRLQFAGCNLFGALLLHWVAGITFMLLVTVSVLQLREVLHPDLLAQMIRPQEPQPDLLGNLLQDRVATHAKRMTLSLAIYIALLGVFVWVPAALVHRVGGSHFLPFLRLQFCYLLPHQLQVPVELFMFHLCMLAFLEKYKNHIGEMQHYWLVYICGKLGIVESVLPLQV 664
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A7S2MEA0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MEA0_9STRA) HSP 1 Score: 229 bits (585), Expect = 5.710e-66 Identity = 129/209 (61.72%), Postives = 158/209 (75.60%), Query Frame = 1 Query: 178 AMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPVQLELRYG---MPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLP 795 A+ AA+VKVG+LL LKMLLLPLLLG+ LDA+TL +FG S R+ + + L GS+LLHWV GITFML VTVSVLQLREV HPDLLA IIRPQEP PDLLG+LLQESG THA+RM +SL IY AL+++ VW P +L+ L G ++ +PQLQ+PVEL++ HL+MLAFLEK++N IGEMQH WLV C +GLT +VLP Sbjct: 2 ALDCAAAIVKVGVLLFLKMLLLPLLLGIWLDASTLSLFGSSVNERILYAGKDLFGSILLHWVAGITFMLIVTVSVLQLREVTHPDLLASIIRPQEPQPDLLGNLLQESGTTHAKRMVLSLCIYAALLSIHVWLPARLLVALGIGRHLPFFRPKFWFLFLPQLQVPVELLVFHLSMLAFLEKYKNHIGEMQHYWLVFICRWMGLTDHVLP 210
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A225X148_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X148_9STRA) HSP 1 Score: 227 bits (579), Expect = 3.010e-64 Identity = 121/258 (46.90%), Postives = 178/258 (68.99%), Query Frame = 1 Query: 22 SSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLP 795 ++++ D L+L DL T +GY+ + + +WR ++ S + ++ A+R A+VKV LL LKM++LP++LG+C+D TL +F SG+ RV F Q+++ SL++HWVLGITFMLFVTVSVLQ+REV HPD+LA +IRPQE HPDLL +LL E HARRM +SLAIY AL+ + V AP ++ L P + P+ L ++ P++Q+P+EL+++HL +L+ LE +N IG+ QH +V AC LGLT ++LP Sbjct: 442 TAKQTGDCLQLVDLCTCTMGYLAICMTIVLWRFMVRTASSYIHRPLMDGLLWALRCLTAIVKVSTLLLLKMVILPIVLGLCIDFATLHLFMISGQDRVAFCMQNMICSLMVHWVLGITFMLFVTVSVLQMREVAHPDILAKVIRPQEDHPDLLRTLLSERCMKHARRMILSLAIYAALLLVLVHAPVRIACVLAPSLFPLTLRFQHFSPEIQVPLELLVVHLVVLSVLEHAKNDIGKFQHLGIVFACEWLGLTEFLLP 699 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14048.2473.1 >prot_H-paniculata_contig14048.2473.1 ID=prot_H-paniculata_contig14048.2473.1|Name=mRNA_H-paniculata_contig14048.2473.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=279bp GWYVLATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNback to top mRNA from alignment at H-paniculata_contig14048:147..5021- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14048.2473.1 ID=mRNA_H-paniculata_contig14048.2473.1|Name=mRNA_H-paniculata_contig14048.2473.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4875bp|location=Sequence derived from alignment at H-paniculata_contig14048:147..5021- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14048:147..5021- >mRNA_H-paniculata_contig14048.2473.1 ID=mRNA_H-paniculata_contig14048.2473.1|Name=mRNA_H-paniculata_contig14048.2473.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1674bp|location=Sequence derived from alignment at H-paniculata_contig14048:147..5021- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |