mRNA_H-paniculata_contig14048.2473.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14048.2473.1
Unique NamemRNA_H-paniculata_contig14048.2473.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: D8LBR1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR1_ECTSI)

HSP 1 Score: 463 bits (1192), Expect = 6.520e-151
Identity = 244/279 (87.46%), Postives = 260/279 (93.19%), Query Frame = 1
Query:    1 GWYVLATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPLPIIARKFPRPAPP 837
            GWY LATSSEEQE+TLRLPDLATICLGY+VMS+MVFMWRGIINAIS RTN QIL +A+KAMRV AAVVKVGLLLSLKMLLLPLLLGVCLDATTL +FGC+GE R RFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHP++L+LIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALV MFVW PT+LV  LFP VMPVQLELRYGMPQLQIPVELVILHLAMLAFLEK+QN+IGEMQH+WLVA CG LGLTR+VLP PI+AR  PRP PP
Sbjct:  685 GWYELATSSEEQENTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGVCLDATTLPLFGCTGEARARFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPEVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHSWLVAVCGRLGLTRFVLPQPIVAR-LPRPGPP 962          
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A6H5JWM1_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM1_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 1.740e-148
Identity = 245/279 (87.81%), Postives = 259/279 (92.83%), Query Frame = 1
Query:    1 GWYVLATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPLPIIARKFPRPAPP 837
            GWY LATSSEEQE+TLRLPDLATICLGY+VMS+MVFMWRGIINAIS RTN QIL +A+KAMRV AAVVKVGLLLSLKMLLLPLLLG CLDATTL +FGC+GE RVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPD+L+LIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALV MFVW PT+LV  LFP VMPVQLELRYGMPQLQIPVELVILHLAMLAFLEK+QN+IGEMQH WLVA CG LGLTR+VLP PI+AR  PRP PP
Sbjct:  769 GWYELATSSEEQENTLRLPDLATICLGYMVMSSMVFMWRGIINAISNRTNTQILLRAKKAMRVIAAVVKVGLLLSLKMLLLPLLLGGCLDATTLPLFGCTGEARVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDVLSLIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVLMFVWVPTRLVGTLFPAVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKYQNRIGEMQHTWLVAVCGRLGLTRFVLPQPIVAR-LPRPGPP 1046          
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A7S2RW40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW40_9STRA)

HSP 1 Score: 328 bits (840), Expect = 2.050e-100
Identity = 174/262 (66.41%), Postives = 212/262 (80.92%), Query Frame = 1
Query:   16 ATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPLP 801
            AT++ +++ TL+LPDL TI LGY+VMS M+FMWR  ++A S+RT++Q++ + R  +  TAAVVKVG+LL LKMLLLPLLLGVCLDA TL++F  S   RV F AQ+LVGSLLLHWVLGITFMLFVTVSVLQLREV+HPD+ A IIRPQEPHPDLLGSLLQESG THARRM MSLAIY+ L+ +FV  PT +V    P  +P++L L Y  PQLQ+PVELVI HL++L FLE+ +N+IGE+QH WLV   G LGLTRY+LPLP
Sbjct:  539 ATTAAKEDHTLQLPDLGTIALGYLVMSCMIFMWRAAVSAASQRTSLQLMSRVRLILDCTAAVVKVGILLFLKMLLLPLLLGVCLDAATLRLFTASAAERVHFTAQNLVGSLLLHWVLGITFMLFVTVSVLQLREVLHPDIFAAIIRPQEPHPDLLGSLLQESGATHARRMIMSLAIYVFLLFVFVSLPTSMVLTWAPTAVPLELNLAYIAPQLQVPVELVIFHLSVLGFLERFKNRIGELQHIWLVRVSGALGLTRYLLPLP 800          
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A7S2CYG7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CYG7_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.010e-92
Identity = 162/263 (61.60%), Postives = 211/263 (80.23%), Query Frame = 1
Query:   13 LATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLV-ARLFPGVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPL 798
            ++++++E++ TL+LPDL ++ LGY+VMS M+F WR I++A+ + T M ++ + R A+  TAAVVKVG+LL LKMLLLPLLLGVCLDA+TL VFG S + R+RF AQ+LVGSLLLHWVLGITFMLFVTVSVLQLREV+HPD+LA +IRPQ+PH      LL+ESG THARRM MSLAIY+ L+ + V  PT +  A   P ++PVQL+  Y +PQ Q+P+ELV+ HL++LAFLE+ +NKIGE+QHAWLV AC  LGLT ++LPL
Sbjct:  359 ISSTAQEEDHTLQLPDLFSMALGYLVMSLMIFTWRSIVSAVCQGTPMPLIGRIRLALDCTAAVVKVGILLFLKMLLLPLLLGVCLDASTLMVFGTSAKDRIRFTAQNLVGSLLLHWVLGITFMLFVTVSVLQLREVMHPDILASVIRPQDPHXXXXXXLLRESGGTHARRMVMSLAIYIMLLFLLVHLPTLVFQACAPPHILPVQLQFSYLLPQFQVPLELVMFHLSVLAFLERFKNKIGELQHAWLVRACRFLGLTHFLLPL 621          
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: W7U493_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U493_9STRA)

HSP 1 Score: 267 bits (682), Expect = 4.010e-80
Identity = 159/263 (60.46%), Postives = 188/263 (71.48%), Query Frame = 1
Query:   34 QEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRV---TAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPV-----QLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPL 798
            +E TL+LPDL  I LGY++MS MVF WR I+ A+ +R  +  L    K +R+   TAAVVKVG+LL  KM L PLLLG+ LDA T QV G     RVRF  ++LVG+LLLHWV GITFMLFVTVSVLQLREV+HPD+LA IIRPQEP PDLLGSLLQESG THARRMA+SL IY+ L+ +FV+ P +L+A  F G          L   Y  PQLQIP EL+I HLAMLAFLE  +N IG +Q+ WL   C  LGLTRY+LPL
Sbjct:  175 EEHTLQLPDLGVILLGYLLMSAMVFTWRTIVCAVCKRMAVTALPMLGKVVRMLECTAAVVKVGVLLFSKMALCPLLLGLWLDAATTQVIGPDHAVRVRFATENLVGALLLHWVAGITFMLFVTVSVLQLREVLHPDILARIIRPQEPQPDLLGSLLQESGLTHARRMAISLGIYVLLLLLFVYLPAELLA--FAGFNATGNGLFHLNFFYLAPQLQIPFELIIFHLAMLAFLEHTKNAIGRLQYMWLRPFCKALGLTRYLLPL 435          
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A835YNH4_9STRA (RING-CH-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH4_9STRA)

HSP 1 Score: 273 bits (698), Expect = 5.160e-80
Identity = 176/354 (49.72%), Postives = 211/354 (59.60%), Query Frame = 1
Query:   16 ATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISE---RTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARL--------------------------------------------FPGVMPVQ----------------LELRYGMPQLQIPVELVILHLAMLAFLEKHQ----------------NKIGEMQHAWLVAACGELGLTRYVLPLPIIARKFP-RPAPP 837
            A++S  ++ TL+L DL TICLGY            ++ A      R  +  L++AR+AMRV AAVVKVGLLLSLKMLLLPLLLG CLDA  L +F  S   R+ F+  +L GSLLLHWV+GITFMLFVTVSVLQLREVVHPD+LA +IRPQEPHPDLLGSLLQESGRTHARRMAMSLAIY+AL+ +FVW P+++ AR                                              PGV P                  L L+Y +PQLQ+P+ELV+ HLAMLAFLE+++                + IG  QH WLV  C  LGLTRY+LPLPI+AR    RPA P
Sbjct:  701 ASASAAEDHTLQLADLLTICLGYAAEVCTPRAAARVLRACKRDRGRVAVLTLQRARRAMRVLAAVVKVGLLLSLKMLLLPLLLGACLDAAALPIFAASPADRLHFLRTNLAGSLLLHWVMGITFMLFVTVSVLQLREVVHPDVLAGVIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYVALLLLFVWVPSRIAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAALPGVPPAXXXXXXXXXXXXXXXXXLRLQYLVPQLQVPMELVVFHLAMLAFLERYKXXXXXXXXXXXXXXXXDSIGRTQHEWLVRWCQRLGLTRYLLPLPILARTLDGRPAGP 1054          
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A4D9D1W8_9STRA (RING-CH-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1W8_9STRA)

HSP 1 Score: 266 bits (681), Expect = 9.920e-79
Identity = 158/263 (60.08%), Postives = 188/263 (71.48%), Query Frame = 1
Query:   34 QEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRV---TAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPV-----QLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPL 798
            +E TL+LPDL  I LGY++MS MVF WR I+ A+ +R  +  L    K +R+   TAAVVKVG+LL  KM L PLLLG+ LDA T QV G     RVRF  ++LVG+LLLHWV GITFMLFVTVSVLQLREV+HPD+LA IIRPQEP PDLLGSLLQESG THARRMA+SL IY+ L+ +FV+ P +L+A  F G          +   Y  PQLQIP EL+I HLAMLAFLE  +N IG +Q+ WL   C  LGLTRY+LPL
Sbjct:  388 EEHTLQLPDLGVILLGYLLMSAMVFTWRSIVCAVCKRMAVTALPMLGKVVRMLECTAAVVKVGVLLFSKMALCPLLLGLWLDAATTQVIGPDHAVRVRFATENLVGALLLHWVAGITFMLFVTVSVLQLREVLHPDILARIIRPQEPQPDLLGSLLQESGLTHARRMAISLGIYVLLLLLFVYLPAELLA--FAGFNATGTGLFHINFFYLAPQLQIPFELIIFHLAMLAFLEHTKNAIGRLQYMWLRPFCKVLGLTRYLLPL 648          
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A7S1FWY8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWY8_9STRA)

HSP 1 Score: 236 bits (602), Expect = 2.730e-67
Identity = 147/285 (51.58%), Postives = 187/285 (65.61%), Query Frame = 1
Query:    4 WYVLATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGII------------NAISERTNMQILRQARKAMRVT---AAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPG-VMP-VQLELRYGMP-QLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLPLPI 804
            W V   +++  +  L+LPDLATI  GY  M   +F+   I+            N + E  N      A K   V    AA+ KV  LL LKMLLLPL+LG  LD TTL +F  + + R++F   +L G+LLLHWV GITFML VTVSVLQLREV+HPDLLA +IRPQEP PDLLG+LLQ+   THA+RM +SLAIY+AL+ +FVW P  LV R+     +P ++L+  Y +P QLQ+PVEL + HL MLAFLEK++N IGEMQH WLV  CG+LG+   VLPL +
Sbjct:  380 WDVYEKAAQHHDSILQLPDLATILAGYFTMGVSIFVCHAILAYAVKKRKQATDNTLDEDENDTRWWVAMKMAGVAECFAAIFKVATLLFLKMLLLPLVLGAWLDITTLPLFQHTLDHRLQFAGCNLFGALLLHWVAGITFMLLVTVSVLQLREVLHPDLLAQMIRPQEPQPDLLGNLLQDRVATHAKRMTLSLAIYIALLGVFVWVPAALVHRVGGSHFLPFLRLQFCYLLPHQLQVPVELFMFHLCMLAFLEKYKNHIGEMQHYWLVYICGKLGIVESVLPLQV 664          
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A7S2MEA0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MEA0_9STRA)

HSP 1 Score: 229 bits (585), Expect = 5.710e-66
Identity = 129/209 (61.72%), Postives = 158/209 (75.60%), Query Frame = 1
Query:  178 AMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPVQLELRYG---MPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLP 795
            A+   AA+VKVG+LL LKMLLLPLLLG+ LDA+TL +FG S   R+ +  + L GS+LLHWV GITFML VTVSVLQLREV HPDLLA IIRPQEP PDLLG+LLQESG THA+RM +SL IY AL+++ VW P +L+  L  G        ++    +PQLQ+PVEL++ HL+MLAFLEK++N IGEMQH WLV  C  +GLT +VLP
Sbjct:    2 ALDCAAAIVKVGVLLFLKMLLLPLLLGIWLDASTLSLFGSSVNERILYAGKDLFGSILLHWVAGITFMLIVTVSVLQLREVTHPDLLASIIRPQEPQPDLLGNLLQESGTTHAKRMVLSLCIYAALLSIHVWLPARLLVALGIGRHLPFFRPKFWFLFLPQLQVPVELLVFHLSMLAFLEKYKNHIGEMQHYWLVFICRWMGLTDHVLP 210          
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Match: A0A225X148_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X148_9STRA)

HSP 1 Score: 227 bits (579), Expect = 3.010e-64
Identity = 121/258 (46.90%), Postives = 178/258 (68.99%), Query Frame = 1
Query:   22 SSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTNMQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCSGETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALIIRPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARLFPGVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWLVAACGELGLTRYVLP 795
            ++++  D L+L DL T  +GY+ +   + +WR ++   S   +  ++     A+R   A+VKV  LL LKM++LP++LG+C+D  TL +F  SG+ RV F  Q+++ SL++HWVLGITFMLFVTVSVLQ+REV HPD+LA +IRPQE HPDLL +LL E    HARRM +SLAIY AL+ + V AP ++   L P + P+ L  ++  P++Q+P+EL+++HL +L+ LE  +N IG+ QH  +V AC  LGLT ++LP
Sbjct:  442 TAKQTGDCLQLVDLCTCTMGYLAICMTIVLWRFMVRTASSYIHRPLMDGLLWALRCLTAIVKVSTLLLLKMVILPIVLGLCIDFATLHLFMISGQDRVAFCMQNMICSLMVHWVLGITFMLFVTVSVLQMREVAHPDILAKVIRPQEDHPDLLRTLLSERCMKHARRMILSLAIYAALLLVLVHAPVRIACVLAPSLFPLTLRFQHFSPEIQVPLELLVVHLVVLSVLEHAKNDIGKFQHLGIVFACEWLGLTEFLLP 699          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14048.2473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBR1_ECTSI6.520e-15187.46RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JWM1_9PHAE1.740e-14887.81RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A7S2RW40_9STRA2.050e-10066.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CYG7_9STRA1.010e-9261.60Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7U493_9STRA4.010e-8060.46Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A835YNH4_9STRA5.160e-8049.72RING-CH-type domain-containing protein n=1 Tax=Tri... [more]
A0A4D9D1W8_9STRA9.920e-7960.08RING-CH-type domain-containing protein n=1 Tax=Nan... [more]
A0A7S1FWY8_9STRA2.730e-6751.58Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2MEA0_9STRA5.710e-6661.72Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A225X148_9STRA3.010e-6446.90E3 ubiquitin-protein ligase n=1 Tax=Phytophthora m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14048contigH-paniculata_contig14048:147..5021 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score466.8
Seed ortholog evalue6.8e-129
Seed eggNOG ortholog2880.D8LBR1
KEGG koko:K10661
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0000176,GO:0000177,GO:0000178,GO:0000209,GO:0000291,GO:0000956,GO:0001101,GO:0002020,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003727,GO:0003824,GO:0004518,GO:0004536,GO:0004540,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006464,GO:0006508,GO:0006511,GO:0006629,GO:0006720,GO:0006725,GO:0006807,GO:0006950,GO:0007275,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009414,GO:0009415,GO:0009628,GO:0009698,GO:0009699,GO:0009892,GO:0009893,GO:0009987,GO:0010025,GO:0010033,GO:0010035,GO:0010143,GO:0010166,GO:0010243,GO:0010345,GO:0010467,GO:0010468,GO:0010498,GO:0010605,GO:0010629,GO:0012505,GO:0016020,GO:0016021,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016075,GO:0016180,GO:0016567,GO:0016740,GO:0016787,GO:0016788,GO:0019222,GO:0019438,GO:0019439,GO:0019538,GO:0019748,GO:0019787,GO:0019899,GO:0019941,GO:0022613,GO:0030163,GO:0030176,GO:0030433,GO:0031123,GO:0031125,GO:0031126,GO:0031224,GO:0031227,GO:0031624,GO:0031974,GO:0031981,GO:0031984,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034427,GO:0034470,GO:0034472,GO:0034475,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0034976,GO:0036211,GO:0036503,GO:0042175,GO:0042221,GO:0042254,GO:0042335,GO:0042802,GO:0043085,GO:0043144,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043628,GO:0043632,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044390,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048856,GO:0050789,GO:0050790,GO:0050896,GO:0051341,GO:0051353,GO:0051603,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0070936,GO:0071025,GO:0071027,GO:0071028,GO:0071051,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0097159,GO:0098827,GO:0140096,GO:0140097,GO:0140098,GO:1900490,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901568,GO:1901570,GO:1901575,GO:1901576,GO:1901698,GO:1901700,GO:1902494,GO:1905354,GO:1990381,GO:2001215
EggNOG free text desc.chlorophyll binding
EggNOG OGsCOG5183@1,KOG1609@2759
EC2.3.2.27
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Exons7
Model size837
Cds size837
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929119.3800569-CDS-H-paniculata_contig14048:146..2661622929119.3800569-CDS-H-paniculata_contig14048:146..266Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 147..266 -
1691480738.1481586-CDS-H-paniculata_contig14048:146..2661691480738.1481586-CDS-H-paniculata_contig14048:146..266Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 147..266 -
1622929119.3976007-CDS-H-paniculata_contig14048:912..10051622929119.3976007-CDS-H-paniculata_contig14048:912..1005Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 913..1005 -
1691480738.1608484-CDS-H-paniculata_contig14048:912..10051691480738.1608484-CDS-H-paniculata_contig14048:912..1005Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 913..1005 -
1622929119.4166946-CDS-H-paniculata_contig14048:1871..19581622929119.4166946-CDS-H-paniculata_contig14048:1871..1958Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 1872..1958 -
1691480738.1771438-CDS-H-paniculata_contig14048:1871..19581691480738.1771438-CDS-H-paniculata_contig14048:1871..1958Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 1872..1958 -
1622929119.4350975-CDS-H-paniculata_contig14048:2178..23551622929119.4350975-CDS-H-paniculata_contig14048:2178..2355Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 2179..2355 -
1691480738.1866133-CDS-H-paniculata_contig14048:2178..23551691480738.1866133-CDS-H-paniculata_contig14048:2178..2355Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 2179..2355 -
1622929119.471678-CDS-H-paniculata_contig14048:3539..36921622929119.471678-CDS-H-paniculata_contig14048:3539..3692Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 3540..3692 -
1691480738.1953194-CDS-H-paniculata_contig14048:3539..36921691480738.1953194-CDS-H-paniculata_contig14048:3539..3692Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 3540..3692 -
1622929119.4875722-CDS-H-paniculata_contig14048:4323..44431622929119.4875722-CDS-H-paniculata_contig14048:4323..4443Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 4324..4443 -
1691480738.214502-CDS-H-paniculata_contig14048:4323..44431691480738.214502-CDS-H-paniculata_contig14048:4323..4443Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 4324..4443 -
1622929119.5053246-CDS-H-paniculata_contig14048:4934..50211622929119.5053246-CDS-H-paniculata_contig14048:4934..5021Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 4935..5021 -
1691480738.2264657-CDS-H-paniculata_contig14048:4934..50211691480738.2264657-CDS-H-paniculata_contig14048:4934..5021Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14048 4935..5021 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14048.2473.1prot_H-paniculata_contig14048.2473.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14048 147..5021 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14048.2473.1

>prot_H-paniculata_contig14048.2473.1 ID=prot_H-paniculata_contig14048.2473.1|Name=mRNA_H-paniculata_contig14048.2473.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=279bp
GWYVLATSSEEQEDTLRLPDLATICLGYVVMSTMVFMWRGIINAISERTN
MQILRQARKAMRVTAAVVKVGLLLSLKMLLLPLLLGVCLDATTLQVFGCS
GETRVRFMAQHLVGSLLLHWVLGITFMLFVTVSVLQLREVVHPDLLALII
RPQEPHPDLLGSLLQESGRTHARRMAMSLAIYLALVAMFVWAPTKLVARL
FPGVMPVQLELRYGMPQLQIPVELVILHLAMLAFLEKHQNKIGEMQHAWL
VAACGELGLTRYVLPLPIIARKFPRPAPP
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mRNA from alignment at H-paniculata_contig14048:147..5021-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14048.2473.1 ID=mRNA_H-paniculata_contig14048.2473.1|Name=mRNA_H-paniculata_contig14048.2473.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4875bp|location=Sequence derived from alignment at H-paniculata_contig14048:147..5021- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGATGGTATGTTCTGGCCACTTCATCAGAGGAGCAGGAAGACACTCTGCG TCTCCCGGACCTGGCGACGATTTGCTTGGGCTACGTGGTGAGGACCCGTG GATTTTGTGGGTGGAGAGCTGAATCTAAATACTTCCATGTTTGAATATGT GAAAGATTTAACTGATTTTACTATATGAAATGATCGCGAGCCAGAGGTTA TTTCGGGTTCCGGACGGTGCTTCGCATAATCAGGTAAAAGTAGACGGTGC CGGCATGGGGGCCGGGGGCAGGAGGGGGGCATGATTAAAACAGAGGCAGG AAGACCAACGAACGCAAAACGCCGACGGCTTAAGCAAAAGGCCAATCTTA TCTATTGTTATTGATAGTTTTTTTTCTCAAGTTGGGTTTTCGATGGCTGT TGCTTCGTTCGGTTTGACATTTTGCCCGTGTGTTATGTATGTATTCATAT ATGTAGTCGATTTGGCGTTGGCTGGATTATCGGTGTAGTTGCGTATGTTG TATACCCGGTACGTTGTAAACCAGCCAACTACATGAGTGTTTTAGTATGT GTTTGATACCGTCATGTTGTTATGGCAGGTGATGTCAACGATGGTGTTCA TGTGGCGAGGCATCATCAACGCCATCTCGGAGCGCACCAACATGCAGATC CTCCGGCAGGCCCGCAAGGCCATGAGAGTGACCGCTGCCGTTGTCAAGGT AGGAAAACGAATGAAAAGGCTCTCATTTGAAACGATAATAGTGTCATCAT TGTTTTGGAACAGCTTCTAAAATCTGCACTCGTGTAAATTATGAAGAAAG AATCCTCACAAGAGCGTAGCGGGCCTTGTTCGCTGTAATAAGCAACATTA TTAGAGGATGGCAATACACACCCCAAGTATAATTAGGTTTCAATCATGGA TCCCCCCCCTTGCTTGTATTGTTACTGCTGCCTGTTTTCAGTGTCTTTCA TGCGCGTTTGCTCAGAGTGTGGAGGATTTGGTTTTAGGTTGCTGTACATC CGCGCCCCTTGTTTTGATATTTTTCAGCTGACCGAGTGTACATGAAGATT TGACGTCAGCTGCATGACCTAAACATGGGTATGATCGAGTTATTTTGTGA CCCCTCCTTCCCCAGAGAGAGAGAATCAGCTCAACAAGTTGTGCGTACGA TAAAACCGTAAACCTTTACTTTCGTCCCTCCCCCCCCCCCCCCCTGCCTT CTCCGTACAATTCCATTCCTTTGATGTGATGGCCATTTGTGTCCCGTCTT TTTTTATTGGCTGGTTTTGATTTTTTTACCAAAACAATTTGTGGTCGCAC GCATTCCGTTTTTTGTTTTTTAATTGCAGGTGGGCCTCTTACTGTCCCTG AAGATGTTGCTGCTCCCCTTGCTTCTTGGAGTTTGCCTGGATGCGACCAC CCTTCAAGTGTTCGGATGCTCGGGAGAAACCCGGGTCCGTTTCATGGCGC AGCATCTGGTGGGCTCTTTGCTTCTGCATTGGGTAAGTGGGACGGACTAA AGATGCAACTGTTATTTGTTTTCATTTATTTTTCGTGCGCGAGCTTTGTT GGTCTGTTCACCAAGTGTGTTGATTTGTTTGTTTTTGTCTGTGCTTTTTA GCCTATCGTTCAAAACCAGAAGTAGATGGTATCGTTTCCTATGTTCGTTC TTCGTATTTAGCCAATCTGGTGATGAAATTATTTTTGCGTTTGATATTGG TATGTGACAATGCCTGTGCACTGGAGATACCGAGCACGTGGCGGTCACCA GGAGCAATGCTTGTTTTTTCCCTTCCTCCTGCCCCCTTCGCCACAGTTAT TTCCCATCTTGATTTTTCTGTAGAGTTTGGAGGCGCATGCAGCAGGCGGT GCCGCCCACTGACACGTTAGTGTGGAAGAAGGAGCCGCTCGTTTCATGCG TGCATGAAACGTAGCCGAGGTAGCGAAGAATTACACCCTGCACGCCCGAG AGTACTTTGCCTTGTTGTCTTTCTCTGTAGACGATTCACCCTGATGGACG GTGTGTGGCCTCGGCGCGGGTGTCTTTTGTCTTGACATTTATCTTCTGCT TTTGCTTTGCTTCGCTTTGATGCAACTTTTTTTTTGTTCCAGTCTGTTTG TGTACCCCCGCCCCTTTCCTCCCCCCCCCCCTGTTTTAGGGTTCGATTCG TTTTTATTGCTACTCTTGTTACGGTACACTATCGCAGTTTCACCGGATCG CATTTTACCTTGCGCCCACGGGTCTGAGGGATCGGGCTAACTTGTCAACA AGAAAAAAAAATACTAGGATTAGGAGATAAATGAGAGTTTCCCGATTGAT TTCATTTTTCTGATATGTTCATGCAACTGCAGATTGAAGTCAGCACATAA CCTCAACATAATTACAATGGAGTGATGAGTGAGAGTACCCCCCCCCCCCC CTCCGAAAGGCTATCGTTGCCCTCGCCCGCCCCTCCCCATCATACAGTAC TGGAGAAAAAAAATATTTGTCGAGTAGCACGTTCAACACGGCTGGATTGT AGGGGACAAACTACCTCAACCATATTGCGTATTAGTCCGTTTGCTTGAGT TATGCGTGCATTAGTGTTTGTTAGAAGCAATCAGCTACATGCGCTTCAAA ACTGCCGCTAGAAAATATCGCAGTCTCCCCCCCACCTCCCACCCCTTCTC TCCTCGGTGTACTCAGGTTCTCGGCATCACCTTCATGCTGTTTGTGACAG TCTCTGTGCTGCAGCTGCGCGAGGTAGTGCATCCAGATCTCCTAGCATTG ATCATCCGCCCGCAAGAGCCGCACCCGGACCTTCTTGGATCGCTGCTGCA GGAGTCCGGGCGGACGCATGCACGCCGCATGGCCATGAGTCTGGTGTGTA TGCAGTTCAACTTGCTCACGAGTTGGGCGGATGCCTGAATGTGGAAGCAG CGGAAAAGGTTTTTGCCTCAGCCTTCTGGGGGTTAAAACCCCCCCCAAAA ACTTGCTCACGAGTATGTGTAACTTGAGGAGAAAATATGTAACCTGAGTG TTTTTTATTTCACCCCCCCTCACCCTCCCATACACATGTACTCTTTGTGT CCTTCGTATTTAGGCGATCTACCTGGCCCTTGTTGCGATGTTCGTGTGGG CACCTACCAAGCTAGTCGCTCGCCTATTTCCGGGCGTGATGCCTGTGCAG GTAAGTAAATGAGGAGTGTTTTAGTCAGGTTGTTTTTATTTGTGCTCTTC ACATGTTCACGTACGGTGGTGGGGTCTTGTACTGTGGTAGTCACGTGTTT TCATGGCGCTTGCTTGCGTTTCCTGGTGGTGATGGCTTTTCGTCTTTTGA TACTGGGTGCCAAAGTTTTATCGGCGCCAAGACAACAGTTGGTATTATGC ATATTGAAACGAAGTGTCAAGAATATGCAGATTTTAGCGTCTGAGTACTC TAAGCGGTGCTGCAAGATAATTGAGAGGTACTATTTTCAGCGTTGAGGTC ATTCAGATCCGTTGAAGTCTCGCGTTTTTAACTGTTCTGAATGTATCGGT TGTATTGCAGGGCGTAGGCGTGCACTTTGAAGCCTAGTATTGAGTCTTTG TCCGTGTGTCACGAGTCTTGAATGAAATTATACGCTGGTGTGTGGTGTTG GGTCTGGTAGCGTTTGTAATCAAATACAGACAGCATAGACAGTATAGCTC GGCCAGACATCTCTGCAACTATAGTACAGTATATAGCAATATGGAGGATG TACATGATCGGTATAGATGAAGCTAGAGCTCTTTTACTTTTTTTCGTGCT CTCATTCCAGTGAACCAACCCACTGACTGCTGTAGACCTGCCGTGCATCG CGTGTGCCCTCCATTTTTGTTTGTGTATACAAATAGCTGTCCCTCAAGTT CACTCATGCAGTGGCGCTTCCAATTATACGTTAATGTGGCTTGATAATTA CCACTCGGTCTTGCCGTTGTGTGCACCCGTTTCTTCTGTCGCTTCGGTGC TTTTTTTTTTCTTTCTGGACTTCATTTTTTTACTGCAAAAACGGCAACGC TGTGAACGAAAAATAGCTGGAGCTACGATACGGCATGCCGCAGCTGCAGA TCCCCGTAGAGCTGGTGATTCTTCACCTTGCCATGCTCGCGTTTCTGGAG AAACATCAGGTAAACTACTACCGTAATTTCCCCCCCCCCTACCCCCTCCA GTGCAGGGTACTCGCTGCACCGTTTGAGTTACAGAGTTTTTGTATCCTTG TCAAGTGTATGGGGGATGTACTTTTTGTCGAGTGTAGAAGTACTGTACCT TTTCGAGAAGAAAAAGGGACTTTATACCTTCGCAAGGCCGAATAATTCAG TGTACCTCTTCGTACGTTGAAGTCTTGAGTACACACAACGTGTTCACCCG CTGGCCGGTCTGTCGGACGGCGCAGCGTCTCTCACCTACCCTTGCTCCCA TCTTTTTGTAAGTAAGCAATGCGGCCAGCGCGAAACCGGGGAGACACGGC AAGTTTGTCGTTTGTGCAGTGTACGTGCAAGTGCACCTGCGTCCCCCCTT TTCTTTGCCCGCGGATTCTATCCAGAGTTGCAAATCAAGCTCTTTTATGT GTTCTTTTTATTGATCACTCTACTCCACTCCACCACATGTCAAGATAGGG GGCAGTACGACAGTAACTTGAATTCACACTATACTACACTACACTAACTA CATTACACTACCGCCCGGTCTCGTCTCGTGTGTCTTTTTCTGATGTTTTC GTGCTCACGTCGTTTTTTCTCTTGTCCCCTTGCTCCCATTTTTTTTTGTC ATCAGAACAAAATCGGAGAGATGCAGCATGCTTGGCTCGTGGCGGCTTGC GGCGAACTGGGTCTCACGCGTTATGTCCTACCCCTACCGATCATCGCCAG GAAGTTTCCGCGCCCTGCTCCGCCC
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Coding sequence (CDS) from alignment at H-paniculata_contig14048:147..5021-

>mRNA_H-paniculata_contig14048.2473.1 ID=mRNA_H-paniculata_contig14048.2473.1|Name=mRNA_H-paniculata_contig14048.2473.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1674bp|location=Sequence derived from alignment at H-paniculata_contig14048:147..5021- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGATGGTATGTTCTGGCCACTTCATCAGAGGAGCAGGAAGACACTCTGCG
TCTCCCGGACCTGGCGACGATTTGCTTGGGCTACGTGGGATGGTATGTTC
TGGCCACTTCATCAGAGGAGCAGGAAGACACTCTGCGTCTCCCGGACCTG
GCGACGATTTGCTTGGGCTACGTGGTGATGTCAACGATGGTGTTCATGTG
GCGAGGCATCATCAACGCCATCTCGGAGCGCACCAACATGCAGATCCTCC
GGCAGGCCCGCAAGGCCATGAGAGTGACCGCTGCCGTTGTCAAGGTGATG
TCAACGATGGTGTTCATGTGGCGAGGCATCATCAACGCCATCTCGGAGCG
CACCAACATGCAGATCCTCCGGCAGGCCCGCAAGGCCATGAGAGTGACCG
CTGCCGTTGTCAAGGTGGGCCTCTTACTGTCCCTGAAGATGTTGCTGCTC
CCCTTGCTTCTTGGAGTTTGCCTGGATGCGACCACCCTTCAAGTGTTCGG
ATGCTCGGGAGAAACCCGGGTCCGTTTCATGGCGCAGCATCTGGTGGGCT
CTTTGCTTCTGCATTGGGTGGGCCTCTTACTGTCCCTGAAGATGTTGCTG
CTCCCCTTGCTTCTTGGAGTTTGCCTGGATGCGACCACCCTTCAAGTGTT
CGGATGCTCGGGAGAAACCCGGGTCCGTTTCATGGCGCAGCATCTGGTGG
GCTCTTTGCTTCTGCATTGGGTTCTCGGCATCACCTTCATGCTGTTTGTG
ACAGTCTCTGTGCTGCAGCTGCGCGAGGTAGTGCATCCAGATCTCCTAGC
ATTGATCATCCGCCCGCAAGAGCCGCACCCGGACCTTCTTGGATCGCTGC
TGCAGGAGTCCGGGCGGACGCATGCACGCCGCATGGCCATGAGTCTGGTT
CTCGGCATCACCTTCATGCTGTTTGTGACAGTCTCTGTGCTGCAGCTGCG
CGAGGTAGTGCATCCAGATCTCCTAGCATTGATCATCCGCCCGCAAGAGC
CGCACCCGGACCTTCTTGGATCGCTGCTGCAGGAGTCCGGGCGGACGCAT
GCACGCCGCATGGCCATGAGTCTGGCGATCTACCTGGCCCTTGTTGCGAT
GTTCGTGTGGGCACCTACCAAGCTAGTCGCTCGCCTATTTCCGGGCGTGA
TGCCTGTGCAGGCGATCTACCTGGCCCTTGTTGCGATGTTCGTGTGGGCA
CCTACCAAGCTAGTCGCTCGCCTATTTCCGGGCGTGATGCCTGTGCAGCT
GGAGCTACGATACGGCATGCCGCAGCTGCAGATCCCCGTAGAGCTGGTGA
TTCTTCACCTTGCCATGCTCGCGTTTCTGGAGAAACATCAGCTGGAGCTA
CGATACGGCATGCCGCAGCTGCAGATCCCCGTAGAGCTGGTGATTCTTCA
CCTTGCCATGCTCGCGTTTCTGGAGAAACATCAGAACAAAATCGGAGAGA
TGCAGCATGCTTGGCTCGTGGCGGCTTGCGGCGAACTGGGTCTCACGCGT
TATGTCCTACCCCTACCGATCATCGCCAGGAAGTTTCCGCGCCCTGCTCC
GCCCAACAAAATCGGAGAGATGCAGCATGCTTGGCTCGTGGCGGCTTGCG
GCGAACTGGGTCTCACGCGTTATGTCCTACCCCTACCGATCATCGCCAGG
AAGTTTCCGCGCCCTGCTCCGCCC
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