mRNA_H-paniculata_contig1383.2350.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1383.2350.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI) HSP 1 Score: 147 bits (370), Expect = 5.710e-36 Identity = 81/156 (51.92%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 284 GFLAITDSKGFRIKEGWFKDKTDKGTKRKDKGSGKGKKKSVPTVEHGNAGEQDDTPFKLSDETIAEMF*QAMRATGDYHDAVTDKMFMDWLEHRLKPAFKEMFPHKKMILVLDKVSFHHGYDPEVGVPETNSKKYNVDLLRKFEAKSIAVPRKIAS 751 G LA D F I EGWFK K DKG R+ GS + E AEM QA RATGDYHDA+TDKMFM+WLE RL PAFK + +KKMILVLD S+HHGYD EVGVPE+NSK YN LLRK++ + I V R++ S Sbjct: 317 GALAAVDENNFPIPEGWFKPK-DKGKGRQGAGS-------------------------MGTEETAEMLWQAKRATGDYHDAMTDKMFMEWLERRLAPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREVTS 446
BLAST of mRNA_H-paniculata_contig1383.2350.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.150e-31 Identity = 74/144 (51.39%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 308 KGFRIKEGWFKDKTDKGTKRKDKGSGKGKKKSVPTVEHGNAGEQDDTPFKLSDETIAEMF*QAMRATGDYHDAVTDKMFMDWLEHRLKPAFKEMFPHKKMILVLDKVSFHHGYDPEVGVPETNSKKYNVDLLRKFEAKSIAVPR 739 +GF I+EGWFK K ++ K K GE D F++SDE AE QA ATGDYH+A+TD MFM WL+HRL PAF F +KKM LVLD S+HH +D EV VPETNSKKYNV+LLRK+ S V R Sbjct: 248 EGFPIREGWFKAKENRAKKIKP-------------------GEAD---FEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTR 369
BLAST of mRNA_H-paniculata_contig1383.2350.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.290e-31 Identity = 74/144 (51.39%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 308 KGFRIKEGWFKDKTDKGTKRKDKGSGKGKKKSVPTVEHGNAGEQDDTPFKLSDETIAEMF*QAMRATGDYHDAVTDKMFMDWLEHRLKPAFKEMFPHKKMILVLDKVSFHHGYDPEVGVPETNSKKYNVDLLRKFEAKSIAVPR 739 +GF I+EGWFK K ++ K K GE D F++SDE AE QA ATGDYH+A+TD MFM WL+HRL PAF F +KKM LVLD S+HH +D EV VPETNSKKYNV+LLRK+ S V R Sbjct: 204 EGFPIREGWFKAKENRAKKIKP-------------------GEAD---FEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTR 325
BLAST of mRNA_H-paniculata_contig1383.2350.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE) HSP 1 Score: 133 bits (335), Expect = 3.190e-31 Identity = 74/144 (51.39%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 308 KGFRIKEGWFKDKTDKGTKRKDKGSGKGKKKSVPTVEHGNAGEQDDTPFKLSDETIAEMF*QAMRATGDYHDAVTDKMFMDWLEHRLKPAFKEMFPHKKMILVLDKVSFHHGYDPEVGVPETNSKKYNVDLLRKFEAKSIAVPR 739 +GF I+EGWFK K ++ K K GE D F++SDE AE QA ATGDYH+A+TD MFM WL+HRL PAF F +KKM LVLD S+HH +D EV VPETNSKKYNV+LLRK+ S V R Sbjct: 325 EGFPIREGWFKAKENRAKKIKP-------------------GEAD---FEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTR 446
BLAST of mRNA_H-paniculata_contig1383.2350.1 vs. uniprot
Match: A0A6H5LE74_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE74_9PHAE) HSP 1 Score: 131 bits (329), Expect = 5.830e-31 Identity = 73/144 (50.69%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 308 KGFRIKEGWFKDKTDKGTKRKDKGSGKGKKKSVPTVEHGNAGEQDDTPFKLSDETIAEMF*QAMRATGDYHDAVTDKMFMDWLEHRLKPAFKEMFPHKKMILVLDKVSFHHGYDPEVGVPETNSKKYNVDLLRKFEAKSIAVPR 739 +G I+EGWFK K ++ K K GE D F++SDE AE QA ATGDYH+A+TD MFM WL+HRL PAF F +KKM LVLD S+HH +D EV VPETNSKKYNV+LLRK+ S V R Sbjct: 166 EGLPIREGWFKAKENRAKKIKP-------------------GEAD---FEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTR 287
BLAST of mRNA_H-paniculata_contig1383.2350.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 132 bits (332), Expect = 9.310e-31 Identity = 76/146 (52.05%), Postives = 88/146 (60.27%), Query Frame = 2 Query: 311 GFRIKEGWFKDKTDKGTKRKDKGSGKGKKKSVPTVEHGNAGEQDDTPFKLSDETIAEMF*QAMRATGDYHDAVTDKMFMDWLEHRLKPAFKEM--FPHKKMILVLDKVSFHHGYDPEVGVPETNSKKYNVDLLRKFEAKSIAVPRK 742 GF I+EGWFK+ +G GKK K+ DE AE QA A GDYH A+TD MFM+WLEHRL PA+ + F KKMILVLD S+HHG+D EV VPETN+KK+NVDLLRKF AKSI V RK Sbjct: 361 GFPIEEGWFKE------------TGSGKK-------------------KMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRK 475
BLAST of mRNA_H-paniculata_contig1383.2350.1 vs. uniprot
Match: A0A6H5K9W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9W3_9PHAE) HSP 1 Score: 120 bits (300), Expect = 9.000e-30 Identity = 58/94 (61.70%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 458 LSDETIAEMF*QAMRATGDYHDAVTDKMFMDWLEHRLKPAFKEMFPHKKMILVLDKVSFHHGYDPEVGVPETNSKKYNVDLLRKFEAKSIAVPR 739 +SDE AE Q ATGDYH+A+TD MFM WL+HRL PAF F +KKM LVLD S+HH +D EV VPETNSKKYNV+LLRK+ S V R Sbjct: 1 MSDEQTAEFLWQVKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTR 94
BLAST of mRNA_H-paniculata_contig1383.2350.1 vs. uniprot
Match: A0A6H5KEG4_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG4_9PHAE) HSP 1 Score: 121 bits (303), Expect = 9.530e-30 Identity = 61/97 (62.89%), Postives = 71/97 (73.20%), Query Frame = 2 Query: 458 LSDETIAEMF*QAMRATGDYHDAVTDKMFMDWLEHRLKPAFKEM--FPHKKMILVLDKVSFHHGYDPEVGVPETNSKKYNVDLLRKFEAKSIAVPRK 742 + DE AE QA A GDYH A+TD MFM+WLEHRL PA+ + F K+MILVLD S+HHG+D EV VPETN+KK+NVDLLR F AKSI V RK Sbjct: 1 MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRK 97
BLAST of mRNA_H-paniculata_contig1383.2350.1 vs. uniprot
Match: A0A6H5JRA8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA8_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.100e-29 Identity = 59/99 (59.60%), Postives = 71/99 (71.72%), Query Frame = 2 Query: 443 DTPFKLSDETIAEMF*QAMRATGDYHDAVTDKMFMDWLEHRLKPAFKEMFPHKKMILVLDKVSFHHGYDPEVGVPETNSKKYNVDLLRKFEAKSIAVPR 739 + F++SDE AE QA ATGDYH+A+TD MFM WL+HRL PAF F +KKM LVL+ S+HH +D EV VPETNSKKYNV+LLRK+ S V R Sbjct: 72 EADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDPQFKNKKMFLVLNNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTR 170
BLAST of mRNA_H-paniculata_contig1383.2350.1 vs. uniprot
Match: A0A6H5KL68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL68_9PHAE) HSP 1 Score: 127 bits (318), Expect = 2.820e-29 Identity = 72/143 (50.35%), Postives = 86/143 (60.14%), Query Frame = 2 Query: 311 GFRIKEGWFKDKTDKGTKRKDKGSGKGKKKSVPTVEHGNAGEQDDTPFKLSDETIAEMF*QAMRATGDYHDAVTDKMFMDWLEHRLKPAFKEMFPHKKMILVLDKVSFHHGYDPEVGVPETNSKKYNVDLLRKFEAKSIAVPR 739 GF I+EGWFK K ++ K K GE D F++SDE AE QA ATG Y++A+TD MFM WL+HRL PAF F +KKM LVLD S+HH +D EV VPETNSKKYNV+LLRK+ S V R Sbjct: 200 GFPIREGWFKAKENRAKKIKP-------------------GEAD---FEMSDEQTAEFLWQAKLATGYYNNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTR 320 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1383.2350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1383.2350.1 >prot_H-paniculata_contig1383.2350.1 ID=prot_H-paniculata_contig1383.2350.1|Name=mRNA_H-paniculata_contig1383.2350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp MRATGDYHDAVTDKMFMDWLEHRLKPAFKEMFPHKKMILVLDKVSFHHGYback to top mRNA from alignment at H-paniculata_contig1383:2996..3963+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1383.2350.1 ID=mRNA_H-paniculata_contig1383.2350.1|Name=mRNA_H-paniculata_contig1383.2350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=968bp|location=Sequence derived from alignment at H-paniculata_contig1383:2996..3963+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1383:2996..3963+ >mRNA_H-paniculata_contig1383.2350.1 ID=mRNA_H-paniculata_contig1383.2350.1|Name=mRNA_H-paniculata_contig1383.2350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=702bp|location=Sequence derived from alignment at H-paniculata_contig1383:2996..3963+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |