mRNA_H-paniculata_contig13703.2283.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13703.2283.1 vs. uniprot
Match: D7G577_ECTSI (Autophagy-related protein 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G577_ECTSI) HSP 1 Score: 566 bits (1458), Expect = 2.110e-184 Identity = 334/506 (66.01%), Postives = 356/506 (70.36%), Query Frame = 1 Query: 1816 DASCLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLRLWNTKKDHSICEVNFQTAVLSVKLNRKRVAVCLKQALHVFDISDMKCLRTLETALNPDGVMALSPNDDNCHLAFPDGARGGSSGSGNSTGGGEVILYDALDLKVLNKVMACRSRVVAVSFSRDGNLLATASEQGTVIRIFTVPAAVKTYTLRRGTTSCGIHSMSFNAAATRLAVSSSNRTIHIFDVSANAGECGGXXXXXSIIRERGRTRHRTTNHSGHQGSIAGRDFPTTSSGEGPEAKVGHIGVGGSENNSGRQKALTAEGSIFTSTSTWISNNKEGAASGGGLASGLRSVVGLLPNRVTKRVQDYVDSNRSFASVRLRGSAGRSICALIPAGDVGSWGLRGSGRGSSRRRVKNGSASGNKNNVRGGQDXXXXXXXXXXXGEILLVVTNEGIMYSYAVDTVRGGECRLEQASSLLMDVSGGQEMIPELFETARCAPPVLAGQG 3333 DA+CLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRL LWNTKKDHSICEVNF TAVL+VKLNRKRVAVCLK ALHVFDISDMKCLRTLETA NPDGVMALSPN++NCHLAFPDGA+ GSSG GGGEVILY+ALDLKVLNKV+ACRSRVVAVSFSRDG LLATASEQGTVIRIFTVPAAVK YTLRRG+TSC I+SMSFNAAATRLAVSSS RTIHIFDVSA G XXXXX +G + EN K GLASG RS+VG+LPNRVTKR+QDYVD RSFASVRLRGSAGRSICALIPAGD G W +G G S + G+D E+LLVVTNEGI+YSY VDTV GGECRL++ASSLLMD S QE+ ELF R APPVLAGQ Sbjct: 19 DATCLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLCLWNTKKDHSICEVNFLTAVLAVKLNRKRVAVCLKTALHVFDISDMKCLRTLETAPNPDGVMALSPNEENCHLAFPDGAKAGSSG-----GGGEVILYNALDLKVLNKVVACRSRVVAVSFSRDGKLLATASEQGTVIRIFTVPAAVKLYTLRRGSTSCDIYSMSFNAAATRLAVSSSTRTIHIFDVSAG----GAXXXXXXXXXXXXXXXXXXXXXXXXEGDV--------------------------ENGXXXNKXXXXXXXXXXXXXXXXXXXXXX-----GLASGFRSMVGMLPNRVTKRMQDYVDCERSFASVRLRGSAGRSICALIPAGDSGVWTGKGGGGAXXXXXXXXXDESXGQ-----GEDEEVAR-------EVLLVVTNEGILYSYVVDTVNGGECRLDEASSLLMDPSASQEIGSELFVPERHAPPVLAGQS 472
BLAST of mRNA_H-paniculata_contig13703.2283.1 vs. uniprot
Match: A0A835Z475_9STRA (Autophagy-related protein 18 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z475_9STRA) HSP 1 Score: 298 bits (763), Expect = 1.100e-86 Identity = 182/403 (45.16%), Postives = 227/403 (56.33%), Query Frame = 1 Query: 1816 DASCLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLRLWNTKKDHSICEVNFQTAVLSVKLNRKRVAVCLKQALHVFDIS-DMKCLRTLETALNPDGVMALSPNDDNCHLAFPDGARGGSSGSGNSTGGGEVILYDALDLKVLNKVMACRSRVVAVSFSRDGNLLATASEQGTVIRIFTVPAAVKTYTLRRGTTSCGIHSMSFNAAATRLAVSSSNRTIHIFDVSANAGECGGXXXXXSIIRERGRTRHRTTNHSGHQGSIAGRDFPTTSSGEGPEAKVGHIGVGGSENNSGRQKALTAEGSIFTSTSTWISNNKEGAASGGGLASGLRSVVGLLPNRVTKRVQDYVDSNRSFASVRLRGSAGRSICALIPAGDVGSWG 3021 DA+CL +GLR G+RIY C PF Q F+ GG+ EMLF +SLVALVG GD+PAFSPRRLRLW+T+K ++CE+NF TAVL+V+LNR+RV V L++ALHVFDI+ MKCL TL T NP V+A SPN++NCHLAFP TG GEV++YDAL LKVLNKV AC+SRV A++F R G LLATASEQGTV+R+FTVP A + +TLRRGT S I S++FN +ATRLAV S+ T+H+FD S P SS ++ G L +G++ V LLP ++KR DYVDS+R+ A RLR CALI G S G Sbjct: 5 DATCLVLGLRGGFRIYDCSPFVQRFSTGGGGLLHVEMLFCTSLVALVGGGDQPAFSPRRLRLWDTRKRAALCELNFVTAVLAVRLNRRRVVVALERALHVFDITCAMKCLHTLATVPNPRAVVAFSPNEENCHLAFP------------GTGVGEVVMYDALALKVLNKVAACKSRVAAMAFCRSGALLATASEQGTVVRVFTVPGAQQVFTLRRGTYSSAIRSLAFNQSATRLAVCGSSSTVHVFDTSL---------------------------------------APRASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGGSGVR----LTAGIKQVAALLP--LSKRATDYVDSSRAAAHARLRSGCTPRACALISDGAGSSGG 350
BLAST of mRNA_H-paniculata_contig13703.2283.1 vs. uniprot
Match: A0A507E776_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E776_9FUNG) HSP 1 Score: 254 bits (650), Expect = 1.770e-71 Identity = 120/245 (48.98%), Postives = 181/245 (73.88%), Query Frame = 1 Query: 1816 DASCLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLRLWNTKKDHSICEVNFQTAVLSVKLNRKRVAVCLKQALHVFDISDMKCLRTLETALNPDGVMALSPNDDNCHLAFPDGARGGSSGSGNSTGGGEVILYDALDLKVLNKVMACRSRVVAVSFSRDGNLLATASEQGTVIRIFTVPAAVKTYTLRRGTTSCGIHSMSFNAAATRLAVSSSNRTIHIF 2550 SC++VG R GYRIY C P +C++ T+GG+G EMLF +SLVALVG+G++PAFSPR+L++ NTK+ ++CE+ F TA+L+VKLNRKR+ V L++ ++++DIS+MK L T++T+ NP+ + ALSP+ DNC++A+P A G + GE++L+DA+ L+ +N + A +S + + F+ DG ++ATAS+QGT+IR+F+VP K + RRGTTS I+S+SFN T L+VSS N T+H+F Sbjct: 10 QTSCISVGTRHGYRIYNCDPMGKCYSKTEGGVGIVEMLFCTSLVALVGAGEQPAFSPRKLQITNTKRQSNVCELTFITAILAVKLNRKRLMVVLEEHIYIYDISNMKLLHTIDTSPNPNALCALSPSSDNCYIAYPPNASGAA---------GELLLFDAISLQAINILQAHKSPLSCIGFNYDGTMVATASDQGTIIRVFSVPTGDKLFQFRRGTTSSRIYSISFNVENTLLSVSSGNDTVHVF 245
BLAST of mRNA_H-paniculata_contig13703.2283.1 vs. uniprot
Match: A0A1D1Y915_9ARAE (Autophagy-related protein 18 n=14 Tax=Eukaryota TaxID=2759 RepID=A0A1D1Y915_9ARAE) HSP 1 Score: 254 bits (650), Expect = 6.370e-71 Identity = 127/257 (49.42%), Postives = 182/257 (70.82%), Query Frame = 1 Query: 1816 DASCLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLRLWNTKKDHSICEVNFQTAVLSVKLNRKRVAVCLKQALHVFDISDMKCLRTLETALNPDGVMALSPNDDNCHLAFPDGARGGSSGSGN-----STGGGEVILYDALDLKVLNKVMACRSRVVAVSFSRDGNLLATASEQGTVIRIFTVPAAVKTYTLRRGTTSCGIHSMSFNAAATRLAVSSSNRTIHIFDVSANAG 2571 D SC++VG + GY+IY C PF +C++ +DGGIG EMLF +SLVALVG+G+ P+FSPRRL++ NTK+ +ICE+ FQT++L+VKLNR+R+ V L+ + V+DIS+MK L T+ET+ NP + ALSP++DNC++A+P SS N + G+V ++DAL L+ +N V A +S V V+ + +G LLATAS++GTVIR+F++P A K Y RRG+ IHS+SFN ++ L VSS T+HIF + N G Sbjct: 19 DFSCISVGTQHGYKIYNCDPFGKCYSKSDGGIGIVEMLFCTSLVALVGAGEHPSFSPRRLQITNTKRQSTICELTFQTSILAVKLNRRRLIVVLELTIFVYDISNMKLLHTIETSPNPSAICALSPSNDNCYIAYPSPTPSPSSPFSNHSTQQTAPSGDVYIFDALSLQPVNIVQAHKSPVAYVAINSEGTLLATASDKGTVIRVFSIPNAQKLYQFRRGSYPARIHSISFNLVSSLLCVSSDTETVHIFKLGGNTG 275
BLAST of mRNA_H-paniculata_contig13703.2283.1 vs. uniprot
Match: A0A1S8VEL2_9FUNG (Uncharacterized protein n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VEL2_9FUNG) HSP 1 Score: 253 bits (645), Expect = 1.210e-70 Identity = 124/245 (50.61%), Postives = 178/245 (72.65%), Query Frame = 1 Query: 1816 DASCLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLRLWNTKKDHSICEVNFQTAVLSVKLNRKRVAVCLKQALHVFDISDMKCLRTLETALNPDGVMALSPNDDNCHLAFPDGARGGSSGSGNSTGGGEVILYDALDLKVLNKVMACRSRVVAVSFSRDGNLLATASEQGTVIRIFTVPAAVKTYTLRRGTTSCGIHSMSFNAAATRLAVSSSNRTIHIF 2550 D SC++VG RTGY+IY PF +C+A DGGIG EMLF +SLVALVG+G++P FSPRRL++ NTK+ +ICE+ F TA+LSVKLNR R+ V L++ ++++DI +MK + T++T+ NP+ + +LSP+ +NC+ A+P A ST GEV+L+DA++L+ +N + A +S + V+F+ DG L+ATAS++GTVIR+FTVP K + RRGT + I+SMSFN T LA+SS T+HIF Sbjct: 19 DYSCISVGTRTGYKIYNSDPFGKCYAKQDGGIGIVEMLFCTSLVALVGAGEQPTFSPRRLQIINTKRQSTICELTFLTAILSVKLNRMRLIVILEEHIYIYDIGNMKLMHTIDTSPNPNALCSLSPSSENCYFAYPSNA---------STSSGEVLLFDAINLQAVNIIQAHKSSLSYVAFNYDGTLIATASDKGTVIRVFTVPQGQKIFQFRRGTYAARIYSMSFNLENTMLAISSDTETVHIF 254
BLAST of mRNA_H-paniculata_contig13703.2283.1 vs. uniprot
Match: A0A0L0HM24_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HM24_SPIPD) HSP 1 Score: 248 bits (633), Expect = 3.620e-69 Identity = 119/245 (48.57%), Postives = 178/245 (72.65%), Query Frame = 1 Query: 1816 DASCLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLRLWNTKKDHSICEVNFQTAVLSVKLNRKRVAVCLKQALHVFDISDMKCLRTLETALNPDGVMALSPNDDNCHLAFPDGARGGSSGSGNSTGGGEVILYDALDLKVLNKVMACRSRVVAVSFSRDGNLLATASEQGTVIRIFTVPAAVKTYTLRRGTTSCGIHSMSFNAAATRLAVSSSNRTIHIF 2550 D SC++VG R GY+IY C P +C+ T+GGIG EMLF +SLVALVG+G++PAFSPRRL++ NTK+ +ICE+ F TA+L+VKLNRKR+ V L++ ++++DIS+MK L T++T+ NP+ + ALSP+ DNC+LA+P G + GE++++DA++L+ +N + A +S + ++F+ DG ++ATAS++GTVIR+F VP K + RRGT I+S+SFN T L VSS+ T+H+F Sbjct: 19 DFSCISVGTRHGYKIYNCDPIGKCYGKTEGGIGIVEMLFCTSLVALVGAGEQPAFSPRRLQITNTKRQSTICELTFVTAILAVKLNRKRLVVVLEEHIYIYDISNMKLLHTIDTSPNPNALCALSPSSDNCYLAYPPNTSGAA---------GELLIFDAINLQAINILQAHKSPLSCIAFNYDGTMVATASDKGTVIRVFAVPTGQKLFQFRRGTYPARIYSISFNLDNTLLCVSSATDTVHVF 254
BLAST of mRNA_H-paniculata_contig13703.2283.1 vs. uniprot
Match: A0A1Y1YDW7_9FUNG (WD40 repeat-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YDW7_9FUNG) HSP 1 Score: 248 bits (632), Expect = 8.310e-69 Identity = 122/275 (44.36%), Postives = 189/275 (68.73%), Query Frame = 1 Query: 1762 LKIGVSCSLPSLYLVGA*DASCLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLRLWNTKKDHSICEVNFQTAVLSVKLNRKRVAVCLKQALHVFDISDMKCLRTLETALNPDGVMALSPNDDNCHLAFPDGARGGSS-------GSGNSTGGGEVILYDALDLKVLNKVMACRSRVVAVSFSRDGNLLATASEQGTVIRIFTVPAAVKTYTLRRGTTSCGIHSMSFNAAATRLAVSSSNRTIHIFDVSAN 2565 + +G + L+L D SC++ G R GY+IY C PF +C++ +DGG+G EMLF +SLVALVG+G++PAFSPRRL++ NTK++ +ICE+ F T +L+VKLNR+R+ V L++ ++V+DIS+MK L +ET+ NP V ALSP++DNC+L +P + SS + + + G+++ +D + L+ +N + A +S V +S S DG ++ATAS++GTVIR+F++P + Y RRG+ I+S+SFN +T L+VSS T+HIF +S N Sbjct: 1 MNLGNKSNNELLFLNFNQDFSCISAGTRNGYKIYNCDPFGKCYSKSDGGVGVVEMLFCTSLVALVGAGEQPAFSPRRLQIANTKRESTICELTFPTTILAVKLNRRRLVVILEEQIYVYDISNMKLLHIIETSPNPHAVCALSPSNDNCYLVYPSPSXXXSSPFSSPAVAASHGSASGDILCFDTISLQNVNYIQAHKSPVSCISVSSDGTMVATASDKGTVIRVFSLPNFQRLYQFRRGSYPAHIYSISFNIVSTLLSVSSDTETVHIFKLSKN 275
BLAST of mRNA_H-paniculata_contig13703.2283.1 vs. uniprot
Match: A0A1E3PKV4_9ASCO (WD40 repeat-like protein n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PKV4_9ASCO) HSP 1 Score: 250 bits (639), Expect = 1.530e-68 Identity = 186/515 (36.12%), Postives = 273/515 (53.01%), Query Frame = 1 Query: 1816 DASCLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLRLWNTKKDHSICEVNFQTAVLSVKLNRKRVAVCLKQALHVFDISDMKCLRTLETALNPDGVMALSPNDDNCHLAFPDGARGGSS------------------GSGNSTGGGEVILYDALDLKVLNKVMACRSRVVAVSFSRDGNLLATASEQGTVIRIFTVPAAVKTYTLRRGTTSCGIHSMSFNAAATRLAVSSSNRTIHIFDVSANAGECGGXXXXXSIIRERGRTRHRTTNHSGHQGSIAGRDFPTTSSGEGPEAKVGHIGVGGSENNSGRQKALTAEGSIFTSTSTWISNNKEGAASGGGLASGLRSVVGLLPNRVTKRVQDYVDSNRSFASVRLRGSAGRSICALIPAGDVGSWGLRGS----GRGSSRRRVKNGSA-----------SGNKNNVRGGQDXXXXXXXXXXXGEILLVVTNEGIMYSYAVDTVRGGECRLEQASSLLMDVS 3261 D+SC++VG GY+IY C PF +CF DGG+G EMLF +SLVA+VG GDRPA SPRRL++ NTK+ +ICE+ F TAVL+VKLNRKR+ V L++ ++++DIS+MK L T+ETA NP V ALSP+ +NC+ +P + G SS G+G++T GEVI+ DAL L+ +N + A +S + V+ + G L+ATAS++GT+IR+F++P RRG+ + I SM F+ + L VSS+ TIHIF + G G + G + +G + S+ R T S +A + +++ + S+F +S + RSV G + N + K V + R FA ++L G + ++ + G+ G S+ V S SG+ N++ XXXXXXXXXX G ++VVT +G Y YA+DT+RGGEC L + SLL + S Sbjct: 22 DSSCISVGSTLGYKIYNCDPFGKCFNKNDGGMGIVEMLFCTSLVAVVGMGDRPALSPRRLKIINTKRQSTICELTFPTAVLAVKLNRKRLVVLLEEQIYIYDISNMKLLHTIETASNPQAVAALSPSSENCYFVYP--SPGPSSTLSNDPMNNNNTRDKVNGGAGSATRTGEVIIMDALSLQPVNVIEAHKSPLSFVAMNAAGTLIATASDKGTIIRVFSIPDGKLMNQFRRGSYASKIFSMGFDHDSALLVVSSATGTIHIFRLGGQGGISLGESIGDEEVGNYGGSED--LYETGSESSLIPRS--NTDSASKLDAFI-----------EAKRRNGGSMASLFRRSSQTLG----------------RSVAGAMGNYLPKGVSQIWEPTRDFAYIKLPHVGGNKLASIPTTATTNVIDMEGATDEAGTKSTTTTVGGNSVKYSISPSVVAISGSLNSI-SSXXXXXXXXXXXXGGVYVMVVTLDGYFYQYAIDTIRGGECELVRQYSLLDNAS 502
BLAST of mRNA_H-paniculata_contig13703.2283.1 vs. uniprot
Match: A0A139A4L9_GONPJ (WD40 repeat-like protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A4L9_GONPJ) HSP 1 Score: 247 bits (631), Expect = 2.640e-68 Identity = 123/257 (47.86%), Postives = 182/257 (70.82%), Query Frame = 1 Query: 1816 DASCLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLRLWNTKKDHSICEVNFQTAVLSVKLNRKRVAVCLKQALHVFDISDMKCLRTLETALNPDGVMALSPNDDNCHLAFPDGARGGSSGSGNSTG---------GGEVILYDALDLKVLNKVMACRSRVVAVSFSRDGNLLATASEQGTVIRIFTVPAAVKTYTLRRGTTSCGIHSMSFNAAATRLAVSSSNRTIHIFDVS 2559 D SC++VG R GY+IY C PF +C+ TDGGIG EMLFS+SLVALVG+G++PAFSPRRL+L NTK+ +ICE+ F TA+L+VKLNR+R+ V L++ ++++DIS+MK L T++T NP+ + +LSP+ D C+LA+P + G S+ GGE++++DA L+ +N + A ++ + AV F+ DG ++ATAS++GTVIR+F VP+ K + RRG I S++FN +T LAVSS + T+HIF ++ Sbjct: 18 DFSCVSVGTRHGYKIYNCDPFGKCYGKTDGGIGIVEMLFSTSLVALVGAGEQPAFSPRRLQLTNTKRQSTICELTFVTAILAVKLNRRRLVVVLEEHIYIYDISNMKLLHTIDTNPNPNALCSLSPSSDPCYLAYPSHSSGSSTALSXXXXXXXXXXXXTGGELLIFDAASLQAVNIIQAHKAPLSAVCFNSDGKMVATASDKGTVIRVFAVPSGQKLHQFRRGAYPARIFSLAFNVQSTYLAVSSDSDTVHIFKMT 274
BLAST of mRNA_H-paniculata_contig13703.2283.1 vs. uniprot
Match: A0A5E8BFJ7_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BFJ7_9ASCO) HSP 1 Score: 251 bits (640), Expect = 3.320e-68 Identity = 129/259 (49.81%), Postives = 183/259 (70.66%), Query Frame = 1 Query: 1816 DASCLAVGLRTGYRIYTCRPFAQCFAMTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLRLWNTKKDHSICEVNFQTAVLSVKLNRKRVAVCLKQALHVFDISDMKCLRTLETALNPDGVMALSPNDDNCHLAFPDGARGGSSG--------------SGNSTGGGEVILYDALDLKVLNKVMACRSRVVAVSFSRDGNLLATASEQGTVIRIFTVPAAVKTYTLRRGTTSCGIHSMSFNAAATRLAVSSSNRTIHIF 2550 D SC++VG + GY ++ C PF +CFA DGGIG EMLF +SLVA+VG GD+P SPRRL++ NTK+ +ICE+ F TAVL VKLNRKR+ V L++ ++++DIS+M+ L T+ET+ NP + ALSP+ DNC+LA+P A SS S N TG +V+++D L L+ +N + A +S + A+SF+ DGNLLATAS++GT++R+F++P+A K Y RRGT I S++FNAA++ LAVSS+ T+HIF Sbjct: 26 DFSCISVGTKNGYNLFNCDPFGKCFAKVDGGIGIVEMLFCTSLVAVVGVGDQPHLSPRRLKIVNTKRKLNICELTFPTAVLRVKLNRKRLIVLLEEQIYIYDISNMQLLYTIETSPNPQAICALSPSSDNCYLAYPSPAPQSSSPFAFPPHVPAANNLTSPNRTG--DVVVFDTLTLQPVNVIEAHKSPLAALSFNADGNLLATASDKGTIVRVFSIPSATKLYQFRRGTYPSRIFSINFNAASSLLAVSSATETVHIF 282 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13703.2283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13703.2283.1 >prot_H-paniculata_contig13703.2283.1 ID=prot_H-paniculata_contig13703.2283.1|Name=mRNA_H-paniculata_contig13703.2283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=481bp MTDGGIGRAEMLFSSSLVALVGSGDRPAFSPRRLRLWNTKKDHSICEVNFback to top mRNA from alignment at H-paniculata_contig13703:262..7003- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13703.2283.1 ID=mRNA_H-paniculata_contig13703.2283.1|Name=mRNA_H-paniculata_contig13703.2283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6742bp|location=Sequence derived from alignment at H-paniculata_contig13703:262..7003- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13703:262..7003- >mRNA_H-paniculata_contig13703.2283.1 ID=mRNA_H-paniculata_contig13703.2283.1|Name=mRNA_H-paniculata_contig13703.2283.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2886bp|location=Sequence derived from alignment at H-paniculata_contig13703:262..7003- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |