mRNA_H-paniculata_contig13682.2268.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13682.2268.1
Unique NamemRNA_H-paniculata_contig13682.2268.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig13682.2268.1 vs. uniprot
Match: D8LHU2_ECTSI (2-isopropylmalate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU2_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 8.240e-114
Identity = 172/195 (88.21%), Postives = 189/195 (96.92%), Query Frame = 1 
Query:    1 VLDITRDMVTHARSHVDDVEFSAEDALRSDYNFLSEVYSVAIKAGATTINVPDTVGYTTPFEFLQLIHHLRQTVRGIEDVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPTFDRPIVSDAPLTNIKTQEIVKSSRLVSSLTGMMVQANKAIVGANAFSHESGIHQ 585
            VL+ITR+MVTHARSHVDDVEFSAEDALRSDY+FLS+VYSVAI+AGATTINVPDTVGYTTP EF+ L+HHLR TVRGI+ VTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRK++YNP+FDRP++S+  LTNIKT+EIVKSS+LVSS+TGMMVQANKAIVGANAFSHESGIHQ
Sbjct:  100 VLEITREMVTHARSHVDDVEFSAEDALRSDYDFLSKVYSVAIEAGATTINVPDTVGYTTPKEFMGLMHHLRGTVRGIDKVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKAYYNPSFDRPVLSETALTNIKTKEIVKSSKLVSSMTGMMVQANKAIVGANAFSHESGIHQ 294
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BLAST of mRNA_H-paniculata_contig13682.2268.1 vs. uniprot
Match: A0A6H5KEF6_9PHAE (2-isopropylmalate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF6_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 9.400e-112
Identity = 171/195 (87.69%), Postives = 188/195 (96.41%), Query Frame = 1 
Query:    1 VLDITRDMVTHARSHVDDVEFSAEDALRSDYNFLSEVYSVAIKAGATTINVPDTVGYTTPFEFLQLIHHLRQTVRGIEDVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPTFDRPIVSDAPLTNIKTQEIVKSSRLVSSLTGMMVQANKAIVGANAFSHESGIHQ 585
            VL+ITR+MVTHARSHVDDVEFSAEDALRSDY+FLSEVYSVAI+AGATTINVPDTVGYTTP EF+ L+HHLR TVRG++ VTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRK++YNP+FDRP++S+  LTNI T+EIVKSS+LVSS+TGMMVQANKAIVGANAFSHESGIHQ
Sbjct:  244 VLEITREMVTHARSHVDDVEFSAEDALRSDYDFLSEVYSVAIEAGATTINVPDTVGYTTPKEFMGLMHHLRGTVRGVDKVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKAYYNPSFDRPVLSETALTNINTKEIVKSSKLVSSMTGMMVQANKAIVGANAFSHESGIHQ 438
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BLAST of mRNA_H-paniculata_contig13682.2268.1 vs. uniprot
Match: A0A7S2WKU9_9STRA (2-isopropylmalate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKU9_9STRA)

HSP 1 Score: 304 bits (778), Expect = 1.700e-97
Identity = 159/195 (81.54%), Postives = 171/195 (87.69%), Query Frame = 1 
Query:    1 VLDITRDMVTHARSHVDDVEFSAEDALRSDYNFLSEVYSVAIKAGATTINVPDTVGYTTPFEFLQLIHHLRQTVRGIEDVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPTFDRPIVSDAPLTNIKTQEIVKSSRLVSSLTGMMVQANKAIVGANAFSHESGIHQ 585
            VLDIT +MV++ARS  +DVEFSAEDALRSD  FL EVYS AI+AGATT+NVPDTVGYTTP EF  LI  +R  VRGIE VTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKS+YNP F RP  S+ PLTNI TQEI KSSRLVS++TGM VQ NKAIVGANAF+HESGIHQ
Sbjct:  205 VLDITTEMVSYARSFCEDVEFSAEDALRSDPEFLYEVYSRAIEAGATTLNVPDTVGYTTPREFQTLIEGMRTHVRGIESVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSYYNPRFGRPAESETPLTNIMTQEIFKSSRLVSTMTGMAVQPNKAIVGANAFAHESGIHQ 399
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BLAST of mRNA_H-paniculata_contig13682.2268.1 vs. uniprot
Match: A0A7S2UVN2_9STRA (2-isopropylmalate synthase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVN2_9STRA)

HSP 1 Score: 295 bits (754), Expect = 8.330e-95
Identity = 152/195 (77.95%), Postives = 175/195 (89.74%), Query Frame = 1 
Query:    1 VLDITRDMVTHARSHVDDVEFSAEDALRSDYNFLSEVYSVAIKAGATTINVPDTVGYTTPFEFLQLIHHLRQTVRGIEDVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPTFDRPIVSDAPLTNIKTQEIVKSSRLVSSLTGMMVQANKAIVGANAFSHESGIHQ 585
            VL+ITR+MV+ A S VDDVEFSAEDALRSD +FL +VYSVA++AGATT+NVPDTVGYTTP EF QLI  LR+ V+GIE+VTISVHGH+DLGMAVANF++AIEGGARQVECTINGIGERAGNAALEE+VMAL+VR+ +YNP F R +  D  LTNI T+EI K+SRLVSSLTGM+VQANKAIVGANAF+HESGIHQ
Sbjct:  231 VLEITREMVSLAHSLVDDVEFSAEDALRSDPDFLCQVYSVAVEAGATTLNVPDTVGYTTPQEFFQLIQKLRRGVKGIENVTISVHGHNDLGMAVANFLAAIEGGARQVECTINGIGERAGNAALEEVVMALNVRRQYYNPHFLRGVDDDRALTNINTREIYKASRLVSSLTGMVVQANKAIVGANAFAHESGIHQ 425
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BLAST of mRNA_H-paniculata_contig13682.2268.1 vs. uniprot
Match: A0A4D9D6G1_9STRA (2-isopropylmalate synthase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6G1_9STRA)

HSP 1 Score: 293 bits (749), Expect = 1.060e-93
Identity = 153/195 (78.46%), Postives = 170/195 (87.18%), Query Frame = 1 
Query:    1 VLDITRDMVTHARSHVDDVEFSAEDALRSDYNFLSEVYSVAIKAGATTINVPDTVGYTTPFEFLQLIHHLRQTVRGIEDVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPTFDRPIVSDAPLTNIKTQEIVKSSRLVSSLTGMMVQANKAIVGANAFSHESGIHQ 585
            VL ITR+MVT+ARS  +DVEFSAEDALRSD  FL +VYSVA++AGATT+NVPDTVGYTTP EF  LI  LR  V+G+E VTISVHGHDDLGMAVANFM+AIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNP F R    +  LTNI+T EI K+SRLVS+LTGM++Q NKAIVGANAF+HESGIHQ
Sbjct:  157 VLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRAHVKGVEGVTISVHGHDDLGMAVANFMAAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQ 351
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BLAST of mRNA_H-paniculata_contig13682.2268.1 vs. uniprot
Match: A0A6V1NWK8_HETAK (2-isopropylmalate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NWK8_HETAK)

HSP 1 Score: 291 bits (745), Expect = 1.200e-92
Identity = 152/195 (77.95%), Postives = 170/195 (87.18%), Query Frame = 1 
Query:    1 VLDITRDMVTHARSHVDDVEFSAEDALRSDYNFLSEVYSVAIKAGATTINVPDTVGYTTPFEFLQLIHHLRQTVRGIEDVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPTFDRPIVSDAPLTNIKTQEIVKSSRLVSSLTGMMVQANKAIVGANAFSHESGIHQ 585
            V+ ITR+MV  ARS V+DVEFSAEDALRSD +FL EVYSVAI+AGATTINVPDTVGYTTP EF  L+H LR  VRGI+ VTISVHGHDDLGMAVANF++AIEGGARQVECTINGIGERAGNAALEE+VMAL+VRK+ YNP F R    +  LTN+ T+EI K+SRLVSS+TGMMVQ NKAIVGANAF+HESGIHQ
Sbjct:  196 VVAITREMVGLARSLVEDVEFSAEDALRSDPDFLCEVYSVAIEAGATTINVPDTVGYTTPDEFYALMHKLRAGVRGIDQVTISVHGHDDLGMAVANFLAAIEGGARQVECTINGIGERAGNAALEEVVMALNVRKAHYNPAFGRATDDERALTNVNTREIYKTSRLVSSMTGMMVQPNKAIVGANAFAHESGIHQ 390
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BLAST of mRNA_H-paniculata_contig13682.2268.1 vs. uniprot
Match: A0A835YKD7_9STRA (2-isopropylmalate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD7_9STRA)

HSP 1 Score: 289 bits (740), Expect = 2.920e-92
Identity = 150/196 (76.53%), Postives = 172/196 (87.76%), Query Frame = 1 
Query:    1 VLDITRDMVTHARSHVDDVEFSAEDALRSDYNFLSEVYSVAIKAGATTINVPDTVGYTTPFEFLQLIHHLRQTVRGIEDVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPT-FDRPIVSDAPLTNIKTQEIVKSSRLVSSLTGMMVQANKAIVGANAFSHESGIHQ 585
            VL IT +MV+HA+S +DDVEFSAEDALRSD  FL++V+SVAI AGA+TINVPDTVGYTTP EF  LIH+LR+ V GI+ VTISVHGH+DLGMAVANF++AIEGGARQVECT+NGIGERAGNAALEEIVMALHVRK ++N   F RP  S+  LTN+ TQE+ KSSRLVSS+TGM VQANKAIVGANAF+HESGIHQ
Sbjct:  157 VLAITHEMVSHAKSLIDDVEFSAEDALRSDPEFLAKVFSVAIAAGASTINVPDTVGYTTPGEFKSLIHYLREHVAGIDGVTISVHGHNDLGMAVANFLAAIEGGARQVECTVNGIGERAGNAALEEIVMALHVRKGYFNAAAFARPADSERALTNVVTQELYKSSRLVSSMTGMTVQANKAIVGANAFAHESGIHQ 352
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BLAST of mRNA_H-paniculata_contig13682.2268.1 vs. uniprot
Match: A0A7S0EBN5_9CRYP (2-isopropylmalate synthase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0EBN5_9CRYP)

HSP 1 Score: 286 bits (733), Expect = 1.840e-90
Identity = 150/195 (76.92%), Postives = 169/195 (86.67%), Query Frame = 1 
Query:    1 VLDITRDMVTHARSHVDDVEFSAEDALRSDYNFLSEVYSVAIKAGATTINVPDTVGYTTPFEFLQLIHHLRQTVRGIEDVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPTFDRPIVSDAPLTNIKTQEIVKSSRLVSSLTGMMVQANKAIVGANAFSHESGIHQ 585
            VL IT +MV  A+S VDDVEFSAEDALRSD  FL++V+SVAIKAGATTINVPDTVG+TTP EF + I +LR+   GIEDVTISVHGHDDLGMAVANF+ AIEGGARQVE T+NGIGERAGNAA+EE+VMALHVRKS+YNP F RP  S+  LTNI  +EI +SSRLV+SLTGMMVQ NKAIVGANAF+HESGIHQ
Sbjct:  223 VLKITEEMVKLAKSLVDDVEFSAEDALRSDRAFLAQVFSVAIKAGATTINVPDTVGFTTPTEFKETIEYLRKHTVGIEDVTISVHGHDDLGMAVANFLGAIEGGARQVEVTVNGIGERAGNAAMEEVVMALHVRKSYYNPMFGRPADSNDALTNIVLKEIHRSSRLVTSLTGMMVQPNKAIVGANAFAHESGIHQ 417
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BLAST of mRNA_H-paniculata_contig13682.2268.1 vs. uniprot
Match: R7QCD2_CHOCR (2-isopropylmalate synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCD2_CHOCR)

HSP 1 Score: 282 bits (721), Expect = 1.390e-89
Identity = 143/195 (73.33%), Postives = 169/195 (86.67%), Query Frame = 1 
Query:    1 VLDITRDMVTHARSHVDDVEFSAEDALRSDYNFLSEVYSVAIKAGATTINVPDTVGYTTPFEFLQLIHHLRQTVRGIEDVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPTFDRPIVSDAPLTNIKTQEIVKSSRLVSSLTGMMVQANKAIVGANAFSHESGIHQ 585
            V++IT++ VT+ARS  +DVEFSAEDA+RSD +FL EV+S AI+AGATTINVPDTVGYTTP EF  LI +LR+ VRGI+DVTISVHGHDDLGMAVANF+SA+E GARQ+ECTINGIGERAGNA+LEE+VMALHVR+ FYN    +    DAPLTNI  +EI  +SR+VS+LTGM+VQ NKAIVGANAF+HESGIHQ
Sbjct:  149 VVEITKETVTYARSLCEDVEFSAEDAIRSDPDFLCEVFSAAIEAGATTINVPDTVGYTTPSEFASLIRYLRRNVRGIDDVTISVHGHDDLGMAVANFLSAVENGARQMECTINGIGERAGNASLEEVVMALHVRRQFYNARMGKDNKVDAPLTNIVHKEIHHTSRMVSNLTGMLVQPNKAIVGANAFAHESGIHQ 343
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BLAST of mRNA_H-paniculata_contig13682.2268.1 vs. uniprot
Match: A0A7S0VM37_9CRYP (2-isopropylmalate synthase n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VM37_9CRYP)

HSP 1 Score: 282 bits (722), Expect = 7.280e-89
Identity = 145/195 (74.36%), Postives = 170/195 (87.18%), Query Frame = 1 
Query:    1 VLDITRDMVTHARSHVDDVEFSAEDALRSDYNFLSEVYSVAIKAGATTINVPDTVGYTTPFEFLQLIHHLRQTVRGIEDVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPTFDRPIVSDAPLTNIKTQEIVKSSRLVSSLTGMMVQANKAIVGANAFSHESGIHQ 585
            VL IT +MV++A+S VDDVEFSAEDALRSD+ FL+EVYSVA+KAGATT+NVPDTVGYTTP EF  L+ +LR+ V GIE VTISVHGH+DLGMAV+NF+SAIEGGARQVE TINGIGERAGNAALEE+VM L+VRK++YN    RP  S+A LTNI  +EI +SS+LV++LTGM VQ NKAIVGANAF+HESGIHQ
Sbjct:  219 VLAITAEMVSYAKSFVDDVEFSAEDALRSDWAFLAEVYSVAVKAGATTLNVPDTVGYTTPAEFKALVEYLREHVEGIEGVTISVHGHNDLGMAVSNFLSAIEGGARQVEVTINGIGERAGNAALEEVVMGLYVRKNYYNERLGRPADSEAELTNINKKEIHRSSKLVTALTGMPVQPNKAIVGANAFAHESGIHQ 413
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13682.2268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHU2_ECTSI8.240e-11488.212-isopropylmalate synthase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KEF6_9PHAE9.400e-11287.692-isopropylmalate synthase n=1 Tax=Ectocarpus sp. ... [more]
A0A7S2WKU9_9STRA1.700e-9781.542-isopropylmalate synthase n=1 Tax=Rhizochromulina... [more]
A0A7S2UVN2_9STRA8.330e-9577.952-isopropylmalate synthase (Fragment) n=1 Tax=Fibr... [more]
A0A4D9D6G1_9STRA1.060e-9378.462-isopropylmalate synthase n=1 Tax=Nannochloropsis... [more]
A0A6V1NWK8_HETAK1.200e-9277.952-isopropylmalate synthase n=1 Tax=Heterosigma aka... [more]
A0A835YKD7_9STRA2.920e-9276.532-isopropylmalate synthase n=1 Tax=Tribonema minus... [more]
A0A7S0EBN5_9CRYP1.840e-9076.922-isopropylmalate synthase n=3 Tax=Geminigeraceae ... [more]
R7QCD2_CHOCR1.390e-8973.332-isopropylmalate synthase n=1 Tax=Chondrus crispu... [more]
A0A7S0VM37_9CRYP7.280e-8974.362-isopropylmalate synthase n=2 Tax=Hemiselmis TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13682contigH-paniculata_contig13682:484..4641 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score336.3
Seed ortholog evalue9.4e-90
Seed eggNOG ortholog2880.D8LHU2
KEGG rclassRC00004,RC00470,RC02754
KEGG koko:K01649
KEGG ReactionR01213
KEGG Pathwayko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230
KEGG ModuleM00432
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the alpha-IPM synthase homocitrate synthase family
EggNOG OGsCOG0119@1,KOG2367@2759
Ec32 ortholog description2-Isopropylmalate synthase
Ec32 orthologEc-18_000460.1
EC2.3.3.13
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Exons4
Model size585
Cds size564
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13682.2268.1prot_H-paniculata_contig13682.2268.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13682 484..4620 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929086.3329937-CDS-H-paniculata_contig13682:483..6631622929086.3329937-CDS-H-paniculata_contig13682:483..663Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13682 484..663 -
1691480725.9232914-CDS-H-paniculata_contig13682:483..6631691480725.9232914-CDS-H-paniculata_contig13682:483..663Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13682 484..663 -
1622929086.3500962-CDS-H-paniculata_contig13682:1827..20081622929086.3500962-CDS-H-paniculata_contig13682:1827..2008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13682 1828..2008 -
1691480725.9346387-CDS-H-paniculata_contig13682:1827..20081691480725.9346387-CDS-H-paniculata_contig13682:1827..2008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13682 1828..2008 -
1622929086.3618906-CDS-H-paniculata_contig13682:2438..25541622929086.3618906-CDS-H-paniculata_contig13682:2438..2554Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13682 2439..2554 -
1691480725.9427676-CDS-H-paniculata_contig13682:2438..25541691480725.9427676-CDS-H-paniculata_contig13682:2438..2554Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13682 2439..2554 -
1622929086.3770218-CDS-H-paniculata_contig13682:4533..46201622929086.3770218-CDS-H-paniculata_contig13682:4533..4620Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13682 4534..4620 -
1691480725.950507-CDS-H-paniculata_contig13682:4533..46201691480725.950507-CDS-H-paniculata_contig13682:4533..4620Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13682 4534..4620 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929086.39213-UTR-H-paniculata_contig13682:4620..46411622929086.39213-UTR-H-paniculata_contig13682:4620..4641Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13682 4621..4641 -
1691480725.9576166-UTR-H-paniculata_contig13682:4620..46411691480725.9576166-UTR-H-paniculata_contig13682:4620..4641Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13682 4621..4641 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13682.2268.1

>prot_H-paniculata_contig13682.2268.1 ID=prot_H-paniculata_contig13682.2268.1|Name=mRNA_H-paniculata_contig13682.2268.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp
MVTHARSHVDDVEFSAEDALRSDYNFLSEVYSVAIKAGATTINVPDTVGY
TTPFEFLQLIHHLRQTVRGIEDVTISVHGHDDLGMAVANFMSAIEGGARQ
VECTINGIGERAGNAALEEIVMALHVRKSFYNPTFDRPIVSDAPLTNIKT
QEIVKSSRLVSSLTGMMVQANKAIVGANAFSHESGIHQ
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mRNA from alignment at H-paniculata_contig13682:484..4641-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13682.2268.1 ID=mRNA_H-paniculata_contig13682.2268.1|Name=mRNA_H-paniculata_contig13682.2268.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4158bp|location=Sequence derived from alignment at H-paniculata_contig13682:484..4641- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCTGGATATCACCCGGGATATGGTCACGCATGCCAGGTCGCACGTGGA
TGATGTGGAGTTCAGCGCTGAAGATGCTCTGCGATCGGACTACAACTTCT
TGTCTGAGGTACTCAGTAATTGATGCGTTCTTGTGGTTTTTCGTGCGTCT
GGTTTGTCGTTTTTTCTTGCCATTTCTGTTCTTATCTTGTCTTCATATTG
TAGTCTATATATGTACACTTTTTTTTTTTCTTTTTTTTTTGTAACGTTTT
TATGTTGAATATTTTTGATCGTTGCAGAATGGTAATTTTTATTTAAATCA
GACTTGAAGGTTTAGTTGTGATAATTCGTTTGCTGTGTGTGAGATTACAG
GTTGAACAAAAGAATTAAGCAAATGTCTTCATTGTTTTCAACTTGAAATA
TTGATAAAATCTAGTTTTTCCAGGAAATGAATGTACTTCAAGTAGAGTAC
TTTTTTTTTTTTCAAGATTTTAACCCCCCCCCCAATGTTTGTAGCATCAG
TGTTTGAAATATTTTGTAGAGGAAAATAATTTTGGTGTGCGTAATTGTTG
TAAAATCAGTTTGAACTGTCTCCTTTGTATCTTTTTTATCTTTTGGGTTT
TTTTTCTCTCTTTCTGTCTCTTATTTCCTACCTTTTGCCCCTGCCACATT
GTATCCTCCTCTGTATCTGTCTCCATAAACGAGAGCCATCGGGATCAGTA
GTGCGTCGAGTAGAGTACTGTAAAATCGGGAAGTATTGCATCAGGGTGAG
AACGTTTCTTAAACGTGACTATTGATACTACAGCTGGAGGATGGAGAATG
ACCGTATCTTACCTTAACTTACCTTACACAGTCAGAAAAACTCGCCTATC
TATCGATAGCATGGTTAATCACATGATCGATTGGAAACGAGACATGACGT
GACATGACATGATCGACCGCAAACCATACATAGCAATGAAAATCTAGCAA
ACCCTACCTGGGACCGGCTTGAATCAGACAAAACGGACCGCGAACCGGTT
GTACAAATGAAATATACGAGAAAATCCTACCGGAAACCGATTGTAGCAGT
GACAAATCTGACCAAGTCATTCGTAAGTCGTTTTTTTATTAAATCGCGCA
GTTTTTATGTCGACCAGCCAAATATTTGACGCTTTTCGCGAGACCGGCAT
TTTTTGCACATGAGGTTTGCACGTGACCAGAACAGGAACTGGTTCGCCTA
GTGTCCTATTTTCACAAATCGGTTCGCGGTCGGTCGTGTCTTATCTCGTT
TCCAGCCGGTTATGTGAATTGCCCTGACATAGATAGATCTTCGCAAGATC
TTTCCAACGGCACAATTTTCATTGTCAAAAGCTAGAGCCGTCGTTATCAA
AATAATCGGGTGGAAAACCGGTCGCACCACGGTGGTGACATGGATACCTA
CGTTCTGATTTTACCGTATCTCGCAGGCATATACACGAGGAAGTTTACCC
CATTTCTGGCGCATTTGAAAACAACCGGTAGCAAGAAGAGTGAGTTTTTG
TCAACAGTACAGAAGTCACGCGTTTGCGAGCTATCAAGTTTCGTAACCCT
ACACGCCTGGATTGATCTTTATCCGTCGGAAATCGCTCTGACAAGAACAA
AGCTCCATCATCCCGAGGACGCTTAGTCAATGGTTCAACAACTCCGTCGT
GCAAAAACGTGCTTATACCCTCTTATTGGTCATGATCTAATTTTGCTGAT
GAGTGTATATAACTGCAGATTGAAAGTCAGCTGCATTTTCATCCTCAACA
TGACTACAAAGGAGTTATAGTATGAGGTTCAGAGCTTTAGAAGAACCCGC
CCTCACCCTTTGCCCCTTTTTATTAGCGGTTCTGGGTGATATAAATTGGC
CTGAAATGGCGAGGGTTTAGAGGTAGAAGGGATGGGTGAAATCTGGTTAG
CCATATTTGGCAACGTAAGAAAGAGGGAGAAGCCATCGTCGAGGGTCGCT
CTGATGGAAACAAAGCGTTGTCCTACCGAGGACGCTGGGTCAATGGTCTT
TGGGTAGCAACTGTGGCATGCAAAGCATGAGTATGCCCTCCTCGCCTCCC
CTTCACTTCTGTCCCCACTCTCGGCATGCTCTGAAAGGTGTACTCTGTGG
CTATTAAGGCGGGTGCTACAACTATTAACGTGCCGGACACGGTGGGCTAC
ACCACGCCGTTCGAGTTCTTGCAGCTGATACATCACCTTCGCCAGACCGT
CAGGTACATGTTGCTTATACGTACAACCGAACTCTTTCAGGGGTTTGGAT
CAAATTCCTAAAAGTCACCACATACTTGGCTACAAGCATTGAAGTTTATT
GAAATCGCCAACAGAATCAAATTACCCCATGTCACCAATATCACCACACT
ACCAGGCTCATTGAAACACTTCATTCATCATCTTTACCAAATTCACCGCT
CCACCAAACTATTGGAATTACTAAATTCATTGGAAAAACAAACAAACCAG
ATGACTCAATAATAACAGATCACTTCATATTAAATCAACGCTCGTAACTA
CCTCACCAAATTCTCCAAATTGACCAAATTTCGCAAAAAAAAAAGAGCAA
AGAAAATCGAATCACCAACACCAACATCGGTGTCCTGAAAAATGGGGGTT
TCCATCCCACGACGGTTTCGTTGGAGTGCACAGGGGCATCGAAGACGTGA
CAATATCCGTTCATGGCCATGATGACCTCGGTATGGCAGTAGCTAACTTC
ATGTCCGCGATCGAGGGAGGAGCTAGGCAGGTGGAGTGCACGATCAACGG
CATCGGGGAGCGCGCCGGAAACGCTGCGTTGGAGGAGATCGTAATGGCTC
TGCACGTTAGGAAGGTGAACTATCTGTTTACTATCGTGTTATGGTGTCAC
GTTCATTCTATCCCCGTCTCTGTATGGCGATATATTTCGACGCAGAATAC
CTTACGGTCCCGTGTCGCAAAGGGGAAACAGGGATAGAAGGGGGGGGGTG
CATTCATGAAAGCGCATACTGTAGTATCCCGATCATTGATCTCGCACCTC
TACAACGACAGTAAGGAGCATGGCGGGTTTTCGCCGGCCAGGCTGCGTGG
TGCGTTTTAAAAAGGCGATGCTAGTCACTCATCGTCGTCATCCTTGCGTT
GCCACGTCAACCGACTTCTGCCATGGGATTTTGCCCTTCCCGGGCAACCA
ATAGACAACGTCGCGCGGTACATAGAGGACATATCGCTTCTTGTGTAGTT
CACTTGGGAGCATTATCTGCTCACGTATTTCCTACGGAGTATAATCGTAA
TAATTTTGCTCTAGGATGTTACAACCACAAGTTCAGCAGACACTGTCTAC
ATGGTGTAATTTCTTCGACCCAGGTCAACAAGCTCACAGGATATATATAC
CACATGAAATCTCCACCTGTGGGGATGCTTTTTGGAAGGGGGGGTGGTAG
GAAATAGTGGACACATTTGCTTTGGCCTTTGTGAGGTGAAACCCGTAGGT
CGAAAAAATATGGAAAATACTCTAGTATTGTAACGTGTCTTGGTATTACA
TGGAAATTTAGTACCCGAGATGAAGAGACTAGGTATGAAAGGATATCTGC
CTATGAAAATTGTTCCAAGTACGTCAAGGGCTGGTTACGGCAACCGCAAC
GCCGCGTTCTTGATGTTGACTGCGGTAGACACATTGGTTCCATCGAGCGG
TGGCAGCCACCTGAACAACGCAAATAGCTGGATGTCCTGCTGGTGACGCT
ATTTCCAGCAATTGGCCCAAGCCCCCCTTATTGTTTCAATTTTGCTGATG
ATGATCATTGTACACAAGTGAAATTTGCAGTCAGCTGCTTAGCTTGAACA
TGGTTACAATGTTGCAATGCTGAGAGAGGTAGATCATGATGCTACTAACT
ATGGAAGCGGGGTTGACTTAGGAATTCGCATTCCCTCACCCCCCCCACTC
ACCATGGATACCCCCCCCCCCTCCCTTTTTCTTGTTGCCGCTACATTTGA
CGCGAACCATCGTTTGTGAGACTCGCAGTCCTTCTACAACCCGACGTTCG
ACCGCCCTATTGTGTCAGATGCCCCGCTGACCAATATCAAGACCCAGGAG
ATCGTCAAGTCTTCCCGTCTGGTGTCCTCTCTGACGGGGATGATGGTGCA
GGCGAACAAGGCTATCGTTGGCGCGAACGCCTTTTCGCACGAGTCGGGGA
TTCACCAG
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Coding sequence (CDS) from alignment at H-paniculata_contig13682:484..4641-

>mRNA_H-paniculata_contig13682.2268.1 ID=mRNA_H-paniculata_contig13682.2268.1|Name=mRNA_H-paniculata_contig13682.2268.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1128bp|location=Sequence derived from alignment at H-paniculata_contig13682:484..4641- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCACGCATGCCAGGTCGCACGTGGATGATGTGGAGTTCAGCGCTGA
AGATGCTCTGCGATCGGACTACAACTTCTTGTCTGAGATGGTCACGCATG
CCAGGTCGCACGTGGATGATGTGGAGTTCAGCGCTGAAGATGCTCTGCGA
TCGGACTACAACTTCTTGTCTGAGGTGTACTCTGTGGCTATTAAGGCGGG
TGCTACAACTATTAACGTGCCGGACACGGTGGGCTACACCACGCCGTTCG
AGTTCTTGCAGCTGATACATCACCTTCGCCAGACCGTCAGGTGTACTCTG
TGGCTATTAAGGCGGGTGCTACAACTATTAACGTGCCGGACACGGTGGGC
TACACCACGCCGTTCGAGTTCTTGCAGCTGATACATCACCTTCGCCAGAC
CGTCAGGGGCATCGAAGACGTGACAATATCCGTTCATGGCCATGATGACC
TCGGTATGGCAGTAGCTAACTTCATGTCCGCGATCGAGGGAGGAGCTAGG
CAGGTGGAGTGCACGATCAACGGCATCGGGGAGCGCGCCGGAAACGCTGC
GTTGGAGGAGATCGTAATGGCTCTGCACGTTAGGAAGGGGCATCGAAGAC
GTGACAATATCCGTTCATGGCCATGATGACCTCGGTATGGCAGTAGCTAA
CTTCATGTCCGCGATCGAGGGAGGAGCTAGGCAGGTGGAGTGCACGATCA
ACGGCATCGGGGAGCGCGCCGGAAACGCTGCGTTGGAGGAGATCGTAATG
GCTCTGCACGTTAGGAAGTCCTTCTACAACCCGACGTTCGACCGCCCTAT
TGTGTCAGATGCCCCGCTGACCAATATCAAGACCCAGGAGATCGTCAAGT
CTTCCCGTCTGGTGTCCTCTCTGACGGGGATGATGGTGCAGGCGAACAAG
GCTATCGTTGGCGCGAACGCCTTTTCGCACGAGTCGGGGATTCACCAGTC
CTTCTACAACCCGACGTTCGACCGCCCTATTGTGTCAGATGCCCCGCTGA
CCAATATCAAGACCCAGGAGATCGTCAAGTCTTCCCGTCTGGTGTCCTCT
CTGACGGGGATGATGGTGCAGGCGAACAAGGCTATCGTTGGCGCGAACGC
CTTTTCGCACGAGTCGGGGATTCACCAG
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