mRNA_H-paniculata_contig13628.2238.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13628.2238.1 vs. uniprot
Match: D8LR94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR94_ECTSI) HSP 1 Score: 130 bits (327), Expect = 1.520e-33 Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = 1 Query: 1 SPLLYCGSICVTEFGLKGPQFAALLFEMLGDFSRAVFRCLQNLDDFTANPDVVEEFFYLTARFVDYCPEPLVS 219 S LYCGSICVTEFG +GP+F A+LF+ML DF++AVFRCLQ LDDFTANPDVVEEFFYL RFVDYCP+PLV+ Sbjct: 771 SSCLYCGSICVTEFGRRGPEFTAVLFQMLSDFAQAVFRCLQTLDDFTANPDVVEEFFYLVGRFVDYCPDPLVT 843
BLAST of mRNA_H-paniculata_contig13628.2238.1 vs. uniprot
Match: A0A7S2R2F7_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2F7_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 7.620e-21 Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 1 SPLLYCGSICVTEFGLKGPQFAALLFEMLGDFSRAVFRCLQNLDDFTANPDVVEEFFYLTARFVDYCPEPLV 216 SP LY SIC+TE+G + PQF LLF ML D F L+ +DDFTA+PDVVEEFF+L R + YCPEPLV Sbjct: 752 SPYLYAASICITEYG-RNPQFTQLLFGMLSDMCSVTFEFLRTIDDFTAHPDVVEEFFFLAGRMMTYCPEPLV 822
BLAST of mRNA_H-paniculata_contig13628.2238.1 vs. uniprot
Match: A0A7R9VUB8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VUB8_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 5.370e-19 Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 1 SPLLYCGSICVTEFGLKGPQFAALLFEMLGDFSRAVFRCLQNLDDFTANPDVVEEFFYLTARFVDYCPEPLV 216 SP LY S+CV+EFG + P LL ML D + VF L+ DDFTA+PDVVEEFFYL R + +CPEP+V Sbjct: 42 SPYLYAASVCVSEFG-RDPTMVPLLAGMLADLAAVVFGMLRTRDDFTAHPDVVEEFFYLAGRAMSHCPEPVV 112
BLAST of mRNA_H-paniculata_contig13628.2238.1 vs. uniprot
Match: A0A7S2EEE2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EEE2_TRICV) HSP 1 Score: 87.4 bits (215), Expect = 2.000e-18 Identity = 42/73 (57.53%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 1 SPLLYCGSICVTEFGLKGPQFAALLFEMLGDFSRAVFRCLQNLDDFTANPDVVEEFFYLTARFVDYCPEPLVS 219 SP LY SIC++E+G + LLF+ML D S AVF L+ DFTA+PDVVEEFF+LT R + YCPEPLV+ Sbjct: 319 SPYLYAASICISEYG-QDTSAVPLLFKMLTDMSTAVFGLLRTPGDFTAHPDVVEEFFFLTGRMMSYCPEPLVA 390
BLAST of mRNA_H-paniculata_contig13628.2238.1 vs. uniprot
Match: A0A7S2D4C3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4C3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.840e-17 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 1 SPLLYCGSICVTEFGLKGPQFAALLFEMLGDFSRAVFRCLQNLDDFTANPDVVEEFFYLTARFVDYCPEPLV 216 S LY SIC+TEFG + P A+L++ML FS VFR L LD F A+PD+VEE+F+L RF++YCP PL+ Sbjct: 732 SAYLYSASICITEFG-ESPAHEAMLYKMLEQFSTTVFRILSCLDHFVAHPDMVEEYFFLVGRFLEYCPTPLL 802
BLAST of mRNA_H-paniculata_contig13628.2238.1 vs. uniprot
Match: B8BVT4_THAPS (Xpo1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVT4_THAPS) HSP 1 Score: 84.7 bits (208), Expect = 1.840e-17 Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 1 SPLLYCGSICVTEFGLKGPQFAALLFEMLGDFSRAVFRCLQNLDDFTANPDVVEEFFYLTARFVDYCPEPLVS 219 SP LY SIC++E+G K P + +F M+ + S +VF+ L++ +DFTANPDVVEEFFY+ R V CP PLV Sbjct: 860 SPYLYLASICISEYG-KNPTHSQQMFNMVANLSTSVFQALRSAEDFTANPDVVEEFFYMAGRMVSNCPGPLVQ 931
BLAST of mRNA_H-paniculata_contig13628.2238.1 vs. uniprot
Match: A0A7S2D5U0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D5U0_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.500e-16 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 22 SICVTEFGLKGPQFAALLFEMLGDFSRAVFRCLQNLDDFTANPDVVEEFFYLTARFVDYCPEPLV 216 SIC+TEFG + P A+L++ML FS VFR L LD F A+PD+VEE+F+L RF++YCP PL+ Sbjct: 7 SICITEFG-ESPAHEAMLYKMLEQFSTTVFRILSCLDHFVAHPDMVEEYFFLVGRFLEYCPTPLL 70
BLAST of mRNA_H-paniculata_contig13628.2238.1 vs. uniprot
Match: A0A7S3NIA9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIA9_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.060e-15 Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 1 SPLLYCGSICVTEFGLKGPQFAALLFEMLGDFSRAVFRCLQNLDDFTANPDVVEEFFYLTARFVDYCPEPLV 216 S +Y SIC+TEFG + +LFEML S VF ++LDDF PDV EE+FYLT+RF+DYCP+ LV Sbjct: 889 SSYVYASSICITEFGRDSNKHG-ILFEMLTKLSATVFCLFRSLDDFRQRPDVAEEYFYLTSRFLDYCPDHLV 959
BLAST of mRNA_H-paniculata_contig13628.2238.1 vs. uniprot
Match: A0A7S3L1F1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1F1_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.100e-15 Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 1 SPLLYCGSICVTEFGLKGPQFAALLFEMLGDFSRAVFRCLQNLDDFTANPDVVEEFFYLTARFVDYCPEPLV 216 SP LY SIC+TE+G + A L++M+ + + F ++NL DF++ PDV+EEFFYL R + YCPEPL+ Sbjct: 164 SPYLYAASICLTEYG-RDAAMAQPLYDMVANMAETTFGFMRNLQDFSSQPDVMEEFFYLMERMLSYCPEPLI 234
BLAST of mRNA_H-paniculata_contig13628.2238.1 vs. uniprot
Match: A0A8J2SEP9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEP9_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.750e-14 Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 1 SPLLYCGSICVTEFGLKGPQFAALLFEMLGDFSRAVFRCLQNLDDFTANPDVVEEFFYLTARFVDYCPEPLVS 219 S +YC SIC+TEFG + + LFEM+ S+A F LQ+ F +PD+VEE+FYL +RF+DYCP L+S Sbjct: 765 SSFVYCCSICITEFGDEA-RMIPKLFEMVSSVSQACFALLQSPQHFAEHPDLVEEYFYLASRFLDYCPGSLLS 836 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13628.2238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13628.2238.1 >prot_H-paniculata_contig13628.2238.1 ID=prot_H-paniculata_contig13628.2238.1|Name=mRNA_H-paniculata_contig13628.2238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp SPLLYCGSICVTEFGLKGPQFAALLFEMLGDFSRAVFRCLQNLDDFTANPback to top mRNA from alignment at H-paniculata_contig13628:5435..6529+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13628.2238.1 ID=mRNA_H-paniculata_contig13628.2238.1|Name=mRNA_H-paniculata_contig13628.2238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1095bp|location=Sequence derived from alignment at H-paniculata_contig13628:5435..6529+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13628:5435..6529+ >mRNA_H-paniculata_contig13628.2238.1 ID=mRNA_H-paniculata_contig13628.2238.1|Name=mRNA_H-paniculata_contig13628.2238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=450bp|location=Sequence derived from alignment at H-paniculata_contig13628:5435..6529+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |