mRNA_H-paniculata_contig13585.2213.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13585.2213.1
Unique NamemRNA_H-paniculata_contig13585.2213.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig13585.2213.1 vs. uniprot
Match: A0A097IUQ5_9PHAE (Aspartate aminotransferase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUQ5_9PHAE)

HSP 1 Score: 555 bits (1431), Expect = 9.100e-190
Identity = 270/352 (76.70%), Postives = 303/352 (86.08%), Query Frame = 1
Query:  796 SMLNQYSMPQGLKSLQASVSAYYNKCYGLQEGAAKRALKPENVLVTVGATEGLHASLSALAGPGDEVVMFNPGFPWYATTIRLVGATPVLIQLKSPDFAPDMAEVEKAITPRTKVLLLNTPHNPCGHCYTKEELECFAKLAVKHNLYVISDEVYENVTFDGVKHLRIADEEGMFERTITLCSASKLFSLTGWRVGWALSTPKILKGLMVHHTCTSYCSPSPLQHGLSVALDIEDGAFEGIPALIEGNARVLGDVLREKGFGVTQPQGGHFLVADTAPLGMKGFECAKLLLTQAKVVVVPGLIFYAADPNGGEG------MDLDYPLLRFAICKRRETIEDVVQRIRAMEFPT 1833
            S +NQYSMP GLKSLQ SV  YYNK Y L+EGAAKRA+  ENVL+T+GATEGL+AS+ AL GPGDEV++FNPGFPWY +T RL GATPVL++L  PDFAPDM +VEKAITP+T+ LLLNTPHNPCGHCYTK+ELE FA+LA+K+NL+VISDEVYENVTF GV HLRIADEEGMFERT+TLCSASKLFSLTGWRVGWALSTP +LKGL V+H  TSYC+PSPLQHGL+VALD EDG+FE IP L+EGNA VLGDVLREKGF V+QPQGGHFLVADT PLG+KG ECAKLLLTQAKV VVPG+IFY ADP   EG      MD D PLLRFAICK+R TIE+ V+RIRA E PT
Sbjct:   76 SAMNQYSMPPGLKSLQESVCTYYNKRYQLEEGAAKRAIGSENVLITIGATEGLYASIKALVGPGDEVLIFNPGFPWYLSTTRLAGATPVLVELSGPDFAPDMEKVEKAITPKTRALLLNTPHNPCGHCYTKKELEGFARLALKYNLFVISDEVYENVTFGGVGHLRIADEEGMFERTVTLCSASKLFSLTGWRVGWALSTPSLLKGLAVYHVATSYCAPSPLQHGLAVALDAEDGSFEDIPKLVEGNALVLGDVLREKGFIVSQPQGGHFLVADTTPLGLKGLECAKLLLTQAKVSVVPGIIFYFADPKAAEGGSDDPGMDSDRPLLRFAICKQRATIEEAVRRIRATELPT 427          
BLAST of mRNA_H-paniculata_contig13585.2213.1 vs. uniprot
Match: A0A097IUT3_UNDPI (Aspartate aminotransferase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A097IUT3_UNDPI)

HSP 1 Score: 551 bits (1419), Expect = 6.810e-188
Identity = 266/356 (74.72%), Postives = 309/356 (86.80%), Query Frame = 1
Query:  796 SMLNQYSMPQGLKSLQASVSAYYNKCYGLQEGAA-KRALKPENVLVTVGATEGLHASLSALAGPGDEVVMFNPGFPWYATTIRLVGATPVLIQLKSPDFAPDMAEVEKAITPRTKVLLLNTPHNPCGHCYTKEELECFAKLAVKHNLYVISDEVYENVTFDGVKHLRIADEEGMFERTITLCSASKLFSLTGWRVGWALSTPKILKGLMVHHTCTSYCSPSPLQHGLSVALDIEDGAFEGIPALIEGNARVLGDVLREKGFGVTQPQGGHFLVADTAPLGMKGFECAKLLLTQAKVVVVPGLIFYAADP---NGG----EGMDLDYPLLRFAICKRRETIEDVVQRIRAMEFPTSS 1839
            S LNQY++P GL SL++++ AYYNKCYGLQEGA+ KRA+ PENV+VTVGATEGL  +L ALAGPGDEV+MFNPGFPWY  T R+VGATPVL++L  PDFAPDM EVEKAITP+T+VL+LN+PHNPCGHCYTK+E+E FA+LA+K+NL+VISDEVYENVTF GVKHLRIADEEGMFERT+T+CSASKLFSLTGWR+GWALSTP++L+GL V+H  TSYC+PSPLQHGLSVAL+ EDG FE IP L+EGNA +LGD LREKGF +TQPQGGHFLVADT PLG+KG ECAKLLLTQAKV VVPG+IFY  DP   NGG    EG D D PLLRFAICKRR+T+E+ V+RIRAM  P  +
Sbjct:   78 SELNQYTLPSGLGSLKSAICAYYNKCYGLQEGASRKRAISPENVVVTVGATEGLFVTLHALAGPGDEVIMFNPGFPWYLNTTRIVGATPVLVELHGPDFAPDMEEVEKAITPKTRVLILNSPHNPCGHCYTKKEMEGFARLALKYNLFVISDEVYENVTFGGVKHLRIADEEGMFERTVTVCSASKLFSLTGWRIGWALSTPELLEGLSVYHGNTSYCAPSPLQHGLSVALEAEDGLFEDIPKLVEGNALLLGDALREKGFAITQPQGGHFLVADTTPLGLKGLECAKLLLTQAKVGVVPGIIFYFDDPKNSNGGAGGKEGADNDRPLLRFAICKRRDTMEEAVRRIRAMVLPAKN 433          
BLAST of mRNA_H-paniculata_contig13585.2213.1 vs. uniprot
Match: A0A097IUU4_9PHAE (Aspartate aminotransferase n=7 Tax=Sargassum TaxID=3015 RepID=A0A097IUU4_9PHAE)

HSP 1 Score: 545 bits (1403), Expect = 1.380e-185
Identity = 256/346 (73.99%), Postives = 300/346 (86.71%), Query Frame = 1
Query:  793 QSMLNQYSMPQGLKSLQASVSAYYNKCYGLQEGAAKRALKPENVLVTVGATEGLHASLSALAGPGDEVVMFNPGFPWYATTIRLVGATPVLIQLKSPDFAPDMAEVEKAITPRTKVLLLNTPHNPCGHCYTKEELECFAKLAVKHNLYVISDEVYENVTFDGVKHLRIADEEGMFERTITLCSASKLFSLTGWRVGWALSTPKILKGLMVHHTCTSYCSPSPLQHGLSVALDIEDGAFEGIPALIEGNARVLGDVLREKGFGVTQPQGGHFLVADTAPLGMKGFECAKLLLTQAKVVVVPGLIFYAADPNGGEGMDLDYPLLRFAICKRRETIEDVVQRIRAMEFP 1830
            +S LNQYSMP GLKSLQ +V AYYN  YGL+EG AKRA+ PENVL+TVGATEGL+ S+ AL GPGDEV++FNPGFP+Y   IRL+GATPV ++L  PDFAPD+ + EKAITP+T+VLLLN+PHNPCGHCYTKEE+E FA+LA+K+NL+V+SDEVYEN TF   KHLR+ADEEGMFERTITLCSASKLFSLTGWRVGWALSTP++LKGL V H  TSYC+P+PLQHGL+VAL+ EDG FEGIP L+EGNA +LG  LREKGFGVTQP+GGHFLVADT+PLG+KG ECAKL+L  AKV VVPG+IFY ADPN  E +D+D PLLRFA+CKRR+TIE+ V+RIR M FP
Sbjct:   73 KSALNQYSMPAGLKSLQDAVCAYYNNVYGLREGQAKRAITPENVLITVGATEGLYNSMKALVGPGDEVILFNPGFPFYLPMIRLMGATPVFVELDGPDFAPDLEKFEKAITPKTRVLLLNSPHNPCGHCYTKEEIEGFARLALKYNLFVLSDEVYENTTFGDAKHLRLADEEGMFERTITLCSASKLFSLTGWRVGWALSTPELLKGLNVSHCMTSYCAPTPLQHGLAVALEAEDGTFEGIPKLVEGNAELLGSALREKGFGVTQPEGGHFLVADTSPLGLKGVECAKLMLANAKVSVVPGIIFYFADPNADETVDIDRPLLRFALCKRRDTIEEAVRRIRQMTFP 418          
BLAST of mRNA_H-paniculata_contig13585.2213.1 vs. uniprot
Match: A0A097IUS9_SCYLO (Aspartate aminotransferase n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUS9_SCYLO)

HSP 1 Score: 542 bits (1397), Expect = 8.970e-185
Identity = 260/347 (74.93%), Postives = 304/347 (87.61%), Query Frame = 1
Query:  793 QSMLNQYSMPQGLKSLQASVSAYYNKCYGLQEGA-AKRALKPENVLVTVGATEGLHASLSALAGPGDEVVMFNPGFPWYATTIRLVGATPVLIQLKSPDFAPDMAEVEKAITPRTKVLLLNTPHNPCGHCYTKEELECFAKLAVKHNLYVISDEVYENVTFDGVKHLRIADEEGMFERTITLCSASKLFSLTGWRVGWALSTPKILKGLMVHHTCTSYCSPSPLQHGLSVALDIEDGAFEGIPALIEGNARVLGDVLREKGFGVTQPQGGHFLVADTAPLGMKGFECAKLLLTQAKVVVVPGLIFYAADPNGGEGMDLDYPLLRFAICKRRETIEDVVQRIRAMEFP 1830
            ++ LNQYS+P GLKSLQ++VS YYNK YGL+EGA A +A+ PENVLVT+GATEGL+ASL  L+GPGDEV++FNPGFPWY +T R+VGATPVL++L  PDFAPDM ++EKAITP+TKVLL+NTPHNPCGHCYTKEE+E FA+LA+KHNL+VISDEVYENVTF G +H RIADEEGMFERT+TLCSASKLFSLTGWRVGWALSTP +LKGL V+H  TSYC+PSPLQHGL+VAL +EDG+FEGIP L+ GNA +LG+ L+EKGF VTQPQGGHFLVADT PLG+KG ECAKLLLT AKV VVPG+IFY  D  G   +D D PLLRFAICKRR+TIE+ V+RIR M+FP
Sbjct:   72 KTALNQYSLPLGLKSLQSAVSTYYNKSYGLKEGATANKAIGPENVLVTIGATEGLYASLKTLSGPGDEVILFNPGFPWYLSTARVVGATPVLVELAGPDFAPDMEKLEKAITPKTKVLLINTPHNPCGHCYTKEEIEGFARLALKHNLFVISDEVYENVTFGGTRHHRIADEEGMFERTVTLCSASKLFSLTGWRVGWALSTPGLLKGLAVYHGNTSYCAPSPLQHGLAVALGVEDGSFEGIPKLVGGNAELLGNALKEKGFAVTQPQGGHFLVADTTPLGLKGLECAKLLLTHAKVGVVPGVIFYFPDNTG---VDPDRPLLRFAICKRRDTIEEAVRRIREMDFP 415          
BLAST of mRNA_H-paniculata_contig13585.2213.1 vs. uniprot
Match: D7FQ50_ECTSI (Aspartate Aminotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ50_ECTSI)

HSP 1 Score: 540 bits (1392), Expect = 4.420e-184
Identity = 259/346 (74.86%), Postives = 301/346 (86.99%), Query Frame = 1
Query:  793 QSMLNQYSMPQGLKSLQASVSAYYNKCYGLQEGAAKRALKPENVLVTVGATEGLHASLSALAGPGDEVVMFNPGFPWYATTIRLVGATPVLIQLKSPDFAPDMAEVEKAITPRTKVLLLNTPHNPCGHCYTKEELECFAKLAVKHNLYVISDEVYENVTFDGVKHLRIADEEGMFERTITLCSASKLFSLTGWRVGWALSTPKILKGLMVHHTCTSYCSPSPLQHGLSVALDIEDGAFEGIPALIEGNARVLGDVLREKGFGVTQPQGGHFLVADTAPLGMKGFECAKLLLTQAKVVVVPGLIFYAADPNGGEGMDLDYPLLRFAICKRRETIEDVVQRIRAMEFP 1830
            ++ LNQYS+P GLKSLQ++VS YYNKCYGLQEGA  RA+ PENVLVTVGATEGL+ SL ALAGPGDEV++FNPGFPWY +T R+VGATPVL++L  PDFAPD+ ++EKAITP+TKVLL+NTPHNPCGHCYTKEELE FA+LA+K+NL+VISDEVYENVTF   +HLRIADE+GMFERT+TLCSASKLFSLTGWRVGWALSTP++L+GL V+H  TSYC+PSPLQHGL+VAL  EDG+FEGIP L+EGNA +LG+ L EKGF VT+PQGGHFLVADT PLG KG ECAK LLT AKV VVPG+IFY  D  G   +D D PLLRFAICKRR+TIE+ V+RIR M+ P
Sbjct:   71 KTALNQYSLPPGLKSLQSAVSTYYNKCYGLQEGATNRAIGPENVLVTVGATEGLYISLKALAGPGDEVLIFNPGFPWYLSTARMVGATPVLVELAGPDFAPDLDKLEKAITPKTKVLLINTPHNPCGHCYTKEELEGFARLALKYNLFVISDEVYENVTFGEARHLRIADEQGMFERTVTLCSASKLFSLTGWRVGWALSTPELLRGLAVYHCNTSYCAPSPLQHGLAVALGEEDGSFEGIPQLVEGNAELLGNALTEKGFLVTRPQGGHFLVADTTPLGFKGLECAKFLLTHAKVGVVPGVIFYFPDSTG---IDPDRPLLRFAICKRRDTIEEAVRRIREMDLP 413          
BLAST of mRNA_H-paniculata_contig13585.2213.1 vs. uniprot
Match: A0A097IUU6_9PHAE (Aspartate aminotransferase n=1 Tax=Saccharina sculpera TaxID=416830 RepID=A0A097IUU6_9PHAE)

HSP 1 Score: 538 bits (1386), Expect = 7.520e-183
Identity = 258/354 (72.88%), Postives = 305/354 (86.16%), Query Frame = 1
Query:  796 SMLNQYSMPQGLKSLQASVSAYYNKCYGLQEGAA-KRALKPENVLVTVGATEGLHASLSALAGPGDEVVMFNPGFPWYATTIRLVGATPVLIQLKSPDFAPDMAEVEKAITPRTKVLLLNTPHNPCGHCYTKEELECFAKLAVKHNLYVISDEVYENVTFDGVKHLRIADEEGMFERTITLCSASKLFSLTGWRVGWALSTPKILKGLMVHHTCTSYCSPSPLQHGLSVALDIEDGAFEGIPALIEGNARVLGDVLREKGFGVTQPQGGHFLVADTAPLGMKGFECAKLLLTQAKVVVVPGLIFYAADP---NGGEG----MDLDYPLLRFAICKRRETIEDVVQRIRAMEFPT 1833
            S +NQY++P GL SL++++ AYYNKCYGL  G   K+A+ PENV++TVGATE L  SL  LAGPGDEV+MFNPGFPWY +T R+VGATPVL++L  PDFAPDM EVEKAIT +T+VLLLN+PHNPCGHCYTK+E+E FA+LA+K+NL+V+SDEVYENVTF GV+HLRIADEEGMFERT+TLCSASKLFSLTGWRVGWALSTP++LKGL V+H  TSYC+PSPLQHGLSVAL+ EDG+FE +P L+EGNA +LGD L+EKGF +TQPQGGHFLVADT PLG+KG ECAKLLL  AKV VVPG+IFY ADP   NGG G    +D+D PLLRFAICKRR+TIE+ V+RIRAM FP+
Sbjct:   82 SGINQYTLPAGLGSLRSAICAYYNKCYGLHGGGGGKKAIAPENVMITVGATEALFVSLKTLAGPGDEVLMFNPGFPWYLSTTRIVGATPVLVELHGPDFAPDMEEVEKAITAKTRVLLLNSPHNPCGHCYTKKEMEGFARLALKYNLFVLSDEVYENVTFGGVQHLRIADEEGMFERTVTLCSASKLFSLTGWRVGWALSTPEVLKGLAVYHHNTSYCAPSPLQHGLSVALEAEDGSFEDMPKLVEGNALLLGDALKEKGFAITQPQGGHFLVADTTPLGLKGLECAKLLLIHAKVGVVPGIIFYFADPKDSNGGSGNKGGVDMDRPLLRFAICKRRDTIEEAVRRIRAMVFPS 435          
BLAST of mRNA_H-paniculata_contig13585.2213.1 vs. uniprot
Match: A0A097IUV4_9PHAE (Aspartate aminotransferase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUV4_9PHAE)

HSP 1 Score: 534 bits (1376), Expect = 2.030e-181
Identity = 255/351 (72.65%), Postives = 295/351 (84.05%), Query Frame = 1
Query:  796 SMLNQYSMPQGLKSLQASVSAYYNKCYGLQEGAAKRALKPENVLVTVGATEGLHASLSALAGPGDEVVMFNPGFPWYATTIRLVGATPVLIQLKSPDFAPDMAEVEKAITPRTKVLLLNTPHNPCGHCYTKEELECFAKLAVKHNLYVISDEVYENVTFDGVKHLRIADEEGMFERTITLCSASKLFSLTGWRVGWALSTPKILKGLMVHHTCTSYCSPSPLQHGLSVALDIEDGAFEGIPALIEGNARVLGDVLREKGFGVTQPQGGHFLVADTAPLGMKGFECAKLLLTQAKVVVVPGLIFYAADPNGGEG------MDLDYPLLRFAICKRRETIEDVVQRIRAMEFP 1830
            S+LNQYS P G KSLQ +V +YYNK Y L++GA KRALKPENVL+T+GATEGL ASL  +AGPGDEV+MFNPGF WY TTIRL GATPV++ L  PDFAPD+A+VEKAITP TK LLLNTPHNPCGHCYTK+E+E  A+LA KHNLY++SDEVYENVTF   +H+RIADEEGMFERTITLCSASKLFSLTGWRVGWALSTP +LKG+MVHH   SYC+PSPLQHGL+VAL+ EDG FEGIP ++E NAR+LGD LREKGFGV+QP+GGHFLVADT+ LGMKG ECA+ LL +AKV  VPG+IF+  DP G  G      +D D PLLRFAICKRR+TI++ V+RIRAM  P
Sbjct:   77 SLLNQYSFPSGSKSLQGAVCSYYNKHYELKDGATKRALKPENVLITIGATEGLFASLRTVAGPGDEVIMFNPGFLWYVTTIRLAGATPVMVMLDGPDFAPDLAKVEKAITPNTKALLLNTPHNPCGHCYTKQEVEGLARLARKHNLYIVSDEVYENVTFGDAEHIRIADEEGMFERTITLCSASKLFSLTGWRVGWALSTPALLKGVMVHHMNMSYCAPSPLQHGLAVALEAEDGTFEGIPKIVEENARILGDALREKGFGVSQPKGGHFLVADTSGLGMKGSECARFLLKEAKVATVPGMIFFLDDPKGAGGEDGMGAVDKDIPLLRFAICKRRDTIDEAVRRIRAMNPP 427          
BLAST of mRNA_H-paniculata_contig13585.2213.1 vs. uniprot
Match: A0A7S2V1G2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1G2_9STRA)

HSP 1 Score: 401 bits (1031), Expect = 2.890e-129
Identity = 196/341 (57.48%), Postives = 251/341 (73.61%), Query Frame = 1
Query:  802 LNQYSMPQGLKSLQASVSAYYNKCYGLQEGAAKRALKPENVLVTVGATEGLHASLSALAGPGDEVVMFNPGFPWYATTIRLVGATPVLIQLKSPDFAPDMAEVEKAITPRTKVLLLNTPHNPCGHCYTKEELECFAKLAVKHNLYVISDEVYENVTFDGVKHLRIADEEGMFERTITLCSASKLFSLTGWRVGWALSTPKILKGLMVHHTCTSYCSPSPLQHGLSVALDIEDGAFEGIPALIEGNARVLGDVLREKGFGVTQPQGGHFLVADTAPLGMKGFECAKLLLTQAKVVVVPGLIFYA-ADPNGGEGMDLDYPLLRFAICKRRETIEDVVQRIRAM 1821
            LNQYS+P GL SL+ +V  +YN  YG + G    + +  +V VT GATE L  S+ A+AGPGDEV++F+P FPWY   IRL GA+PV+I+L+ PDF PDMA V  AITPRTK ++LN+PHNPCGHCY+KEE+E FA+LA  HNL VISDEVYEN  F G  H RIADE GMFERT+TLCSASKLFSLTGWRVGW L  P +++G+ + H+ T+YC+P+PLQHG+S AL  EDG F+GIPALIE NA++LG  L + G  V   QGGHFLVAD +PL M G+E +K LL +AKV  +P  +FY+ AD +       D P +RFA+CK+  TI++  +RI+++
Sbjct:  110 LNQYSLPTGLDSLKEAVCTFYNSQYGSRPGHVSLSTREGHVSVTAGATEALQISIQAIAGPGDEVIVFDPCFPWYVPCIRLTGASPVVIELEFPDFQPDMAAVAAAITPRTKAIILNSPHNPCGHCYSKEEVERFAQLAQTHNLVVISDEVYENCVFSGNTHHRIADEPGMFERTLTLCSASKLFSLTGWRVGWILGPPALMQGVNMLHSATTYCAPTPLQHGISQALLQEDGQFDGIPALIERNAKILGKALTDVGATVANVQGGHFLVADASPLKMTGYEFSKFLLQEAKVGGLPSFVFYSSADAS-------DKPFIRFALCKKESTIKEAAERIKSV 443          
BLAST of mRNA_H-paniculata_contig13585.2213.1 vs. uniprot
Match: A0A7S3Y5R2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5R2_HETAK)

HSP 1 Score: 395 bits (1016), Expect = 1.880e-128
Identity = 197/340 (57.94%), Postives = 238/340 (70.00%), Query Frame = 1
Query:  802 LNQYSMPQGLKSLQASVSAYYNKCYGLQEGAAKRALKPENVLVTVGATEGLHASLSALAGPGDEVVMFNPGFPWYATTIRLVGATPVLIQLKSPDFAPDMAEVEKAITPRTKVLLLNTPHNPCGHCYTKEELECFAKLAVKHNLYVISDEVYENVTFDGVKHLRIADEEGMFERTITLCSASKLFSLTGWRVGWALSTPKILKGLMVHHTCTSYCSPSPLQHGLSVALDIEDGAFEGIPALIEGNARVLGDVLREKGFGVTQPQGGHFLVADTAPLGMKGFECAKLLLTQAKVVV--VPGLIFYAADPNGGEGMDLDYPLLRFAICKRRETIEDVVQRIR 1815
            LNQYS+P GL +LQ +V  +YN+ Y L     +    P NV V  GATEGL  +++ + G GDEV+MF+P FPWYA  IR+ GATPV++ +  P F PD+  V  AITPRTK LLLN+PHNPCGHCYT+EELE  A LAV H+L VISDEVYENV F G +HLRIAD+EGM ERT+TL SASKL SLTGWRVGW L   + + G+   H  TSYC+P+PLQHG++ AL  EDGAFEG PA IE NA VLG  LRE GF V    GGHFL ADT+PLG+ G    + LL Q  V V  VP +IFYAA+   G   + D PL+RFA+CK R T+E+  +RIR
Sbjct:    9 LNQYSLPAGLGTLQQAVCDFYNRTYNLS--GTRGEYTPANVAVVAGATEGLDVAINTVVGEGDEVIMFDPSFPWYAGIIRMAGATPVILDMAPPKFMPDLDAVRAAITPRTKALLLNSPHNPCGHCYTQEELEALAGLAVAHDLTVISDEVYENVVFAGRRHLRIADQEGMAERTLTLGSASKLLSLTGWRVGWVLGHERYMAGVRTLHAATSYCAPTPLQHGVAAALQAEDGAFEGRPATIEANAAVLGAALREAGFAVCPADGGHFLTADTSPLGLDGLAATRQLLGQEDVRVGAVPSMIFYAAEGGAGGEEEEDRPLVRFALCKERATVEEAAERIR 346          
BLAST of mRNA_H-paniculata_contig13585.2213.1 vs. uniprot
Match: A0A097IUR5_SARFS (Aspartate aminotransferase n=1 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A097IUR5_SARFS)

HSP 1 Score: 282 bits (722), Expect = 4.270e-86
Identity = 137/189 (72.49%), Postives = 160/189 (84.66%), Query Frame = 1
Query:  802 LNQYSMPQGLKSLQASVSAYYNKCYGLQEGAAKRALKPENVLVTVGATEGLHASLSALAGPGDEVVMFNPGFPWYATTIRLVGATPVLIQLKSPDFAPDMAEVEKAITPRTKVLLLNTPHNPCGHCYTKEELECFAKLAVKHNLYVISDEVYENVTFDGVKHLRIADEEGMFERTITLCSASKLFSLTG 1368
            LNQYSMP GLKSLQ +V AYYN+ YGL+EG AKRA+ PENVL+TV ATEGLH SL AL GPGDEVV+FNPG+P+Y   I L+GATPV ++L  PDFAPD+ ++EKAITP+T+VLLLN+PHNPCGHCYTKEE+E FA+LA+K+NL+V+SDEVYEN T         ADEEGMFERTITLCSASKLFSLTG
Sbjct:   76 LNQYSMPTGLKSLQDAVCAYYNRFYGLREGQAKRAIAPENVLITVSATEGLHNSLKALVGPGDEVVLFNPGYPFYLPIINLMGATPVFVELDGPDFAPDLEKLEKAITPKTRVLLLNSPHNPCGHCYTKEEVEGFARLALKYNLFVLSDEVYEN-TXXXXXXXXXADEEGMFERTITLCSASKLFSLTG 263          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13585.2213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A097IUQ5_9PHAE9.100e-19076.70Aspartate aminotransferase n=1 Tax=Desmarestia vir... [more]
A0A097IUT3_UNDPI6.810e-18874.72Aspartate aminotransferase n=1 Tax=Undaria pinnati... [more]
A0A097IUU4_9PHAE1.380e-18573.99Aspartate aminotransferase n=7 Tax=Sargassum TaxID... [more]
A0A097IUS9_SCYLO8.970e-18574.93Aspartate aminotransferase n=3 Tax=Scytosiphonacea... [more]
D7FQ50_ECTSI4.420e-18474.86Aspartate Aminotransferase n=1 Tax=Ectocarpus sili... [more]
A0A097IUU6_9PHAE7.520e-18372.88Aspartate aminotransferase n=1 Tax=Saccharina scul... [more]
A0A097IUV4_9PHAE2.030e-18172.65Aspartate aminotransferase n=1 Tax=Dictyopteris un... [more]
A0A7S2V1G2_9STRA2.890e-12957.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3Y5R2_HETAK1.880e-12857.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A097IUR5_SARFS4.270e-8672.49Aspartate aminotransferase n=1 Tax=Sargassum fusif... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13585contigH-paniculata_contig13585:2..6667 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score545.4
Seed ortholog evalue2e-152
Seed eggNOG ortholog2880.D7FQ50
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0008144,GO:0008483,GO:0010326,GO:0016740,GO:0016769,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363
EggNOG free text desc.transferase activity, transferring nitrogenous groups
EggNOG OGsCOG0436@1,KOG0257@2759
Ec32 ortholog descriptionAspartate Aminotransferase
Ec32 orthologEc-01_007480.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size2302
Cds size1119
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13585.2213.1prot_H-paniculata_contig13585.2213.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13585 737..6219 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929074.5625052-UTR-H-paniculata_contig13585:1..7361622929074.5625052-UTR-H-paniculata_contig13585:1..736Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13585 2..736 +
1691480721.9224317-UTR-H-paniculata_contig13585:1..7361691480721.9224317-UTR-H-paniculata_contig13585:1..736Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13585 2..736 +
1622929074.7110324-UTR-H-paniculata_contig13585:6219..66671622929074.7110324-UTR-H-paniculata_contig13585:6219..6667Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13585 6220..6667 +
1691480722.0520558-UTR-H-paniculata_contig13585:6219..66671691480722.0520558-UTR-H-paniculata_contig13585:6219..6667Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13585 6220..6667 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929074.5735242-CDS-H-paniculata_contig13585:736..9281622929074.5735242-CDS-H-paniculata_contig13585:736..928Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 737..928 +
1691480721.9349854-CDS-H-paniculata_contig13585:736..9281691480721.9349854-CDS-H-paniculata_contig13585:736..928Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 737..928 +
1622929074.5878148-CDS-H-paniculata_contig13585:1492..15581622929074.5878148-CDS-H-paniculata_contig13585:1492..1558Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 1493..1558 +
1691480721.94472-CDS-H-paniculata_contig13585:1492..15581691480721.94472-CDS-H-paniculata_contig13585:1492..1558Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 1493..1558 +
1622929074.6027217-CDS-H-paniculata_contig13585:1777..18911622929074.6027217-CDS-H-paniculata_contig13585:1777..1891Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 1778..1891 +
1691480721.9547195-CDS-H-paniculata_contig13585:1777..18911691480721.9547195-CDS-H-paniculata_contig13585:1777..1891Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 1778..1891 +
1622929074.620833-CDS-H-paniculata_contig13585:2507..25911622929074.620833-CDS-H-paniculata_contig13585:2507..2591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 2508..2591 +
1691480721.9640734-CDS-H-paniculata_contig13585:2507..25911691480721.9640734-CDS-H-paniculata_contig13585:2507..2591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 2508..2591 +
1622929074.6347868-CDS-H-paniculata_contig13585:2989..30491622929074.6347868-CDS-H-paniculata_contig13585:2989..3049Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 2990..3049 +
1691480721.974122-CDS-H-paniculata_contig13585:2989..30491691480721.974122-CDS-H-paniculata_contig13585:2989..3049Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 2990..3049 +
1622929074.6466212-CDS-H-paniculata_contig13585:3453..35681622929074.6466212-CDS-H-paniculata_contig13585:3453..3568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 3454..3568 +
1691480721.9837966-CDS-H-paniculata_contig13585:3453..35681691480721.9837966-CDS-H-paniculata_contig13585:3453..3568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 3454..3568 +
1622929074.660152-CDS-H-paniculata_contig13585:4160..43031622929074.660152-CDS-H-paniculata_contig13585:4160..4303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 4161..4303 +
1691480721.9931514-CDS-H-paniculata_contig13585:4160..43031691480721.9931514-CDS-H-paniculata_contig13585:4160..4303Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 4161..4303 +
1622929074.6744528-CDS-H-paniculata_contig13585:4973..50571622929074.6744528-CDS-H-paniculata_contig13585:4973..5057Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 4974..5057 +
1691480722.0028427-CDS-H-paniculata_contig13585:4973..50571691480722.0028427-CDS-H-paniculata_contig13585:4973..5057Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 4974..5057 +
1622929074.6853046-CDS-H-paniculata_contig13585:5461..55451622929074.6853046-CDS-H-paniculata_contig13585:5461..5545Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 5462..5545 +
1691480722.0193563-CDS-H-paniculata_contig13585:5461..55451691480722.0193563-CDS-H-paniculata_contig13585:5461..5545Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 5462..5545 +
1622929074.6955774-CDS-H-paniculata_contig13585:6042..62191622929074.6955774-CDS-H-paniculata_contig13585:6042..6219Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 6043..6219 +
1691480722.0335293-CDS-H-paniculata_contig13585:6042..62191691480722.0335293-CDS-H-paniculata_contig13585:6042..6219Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13585 6043..6219 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13585.2213.1

>prot_H-paniculata_contig13585.2213.1 ID=prot_H-paniculata_contig13585.2213.1|Name=mRNA_H-paniculata_contig13585.2213.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=373bp
MFQSNQQFIPVCSLVSIAFQSMLNQYSMPQGLKSLQASVSAYYNKCYGLQ
EGAAKRALKPENVLVTVGATEGLHASLSALAGPGDEVVMFNPGFPWYATT
IRLVGATPVLIQLKSPDFAPDMAEVEKAITPRTKVLLLNTPHNPCGHCYT
KEELECFAKLAVKHNLYVISDEVYENVTFDGVKHLRIADEEGMFERTITL
CSASKLFSLTGWRVGWALSTPKILKGLMVHHTCTSYCSPSPLQHGLSVAL
DIEDGAFEGIPALIEGNARVLGDVLREKGFGVTQPQGGHFLVADTAPLGM
KGFECAKLLLTQAKVVVVPGLIFYAADPNGGEGMDLDYPLLRFAICKRRE
TIEDVVQRIRAMEFPTSSKSKS*
back to top

mRNA from alignment at H-paniculata_contig13585:2..6667+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13585.2213.1 ID=mRNA_H-paniculata_contig13585.2213.1|Name=mRNA_H-paniculata_contig13585.2213.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6666bp|location=Sequence derived from alignment at H-paniculata_contig13585:2..6667+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAAGAGTGAGTAGAAGCCTCTTCTCCAAAAGCACAGCCCAGCACATGGA CAACAAAAAATCATCCCAATAATCAACCATCTCAACAGTCACCTGCGGAT GACCTATAGTTGTTCTGAACCCTTCTACCGAAGCAATTATGCCAACAGAT CAAGAAAACATCCCGGGCCAATCATATCCCTCCGAAGCCTACTACTACAC CGCTTTTGTCCCTTCGACCTACTACTGTACACCCAGCTGCGGCCACAGGT GTTGATATAAAGAAACGCATTGAAAAAATCATATTATTTCACGAGATATG TCAAGGGGGATCAAAATGTGTCCTACCGTAGTACGTCTACAGTAGTAGTA ACCCACACCCTTCCCTTCAGCCATGAAAGGGCATTATAATGCATATTTTT TCACAAATACGTTATAGCATACTTCATTCAGCGATTTAGTCATGTTCAAA ACTGACGCCCACACAGATCAATACGGACGCGAGTCAGATCGTTACAGATA AATGTACCAGTACAGATTGGCGACTTACTTACTGTCCGCAAGATGATACA TGCGATCTTGGCTTCTTAGTGAAGCCTTTTCAAACGTTGCCGACAAAACT AGTGGTAAGTTGGAAGAATTTATCCCTCTCTTGCACCGTTACACCTTTTG ACAGCAGTCTCCAACGTGTCTCCTGCCACTCAGGCTCACGATCGACGGCA AGATATTGCGTACACCGTAGATAGCCCCAATCCTAATGTTTCAAAGCAAT CAACAATTTATCCCTGTCTGCTCGCTTGTGTCCATCGCATTTCAGAGCAT GCTCAATCAGTACAGCATGCCCCAAGGCCTAAAGTCGTTGCAGGCCTCAG TAAGTGCGTATTACAACAAGTGCTATGGGCTCCAGGAAGGAGCGGCAAAG AGAGCGCTCAAACCGGAGAACGTTCTGGTGAGGTCTACCCCGGAACCTTC AAGGTCATCCACGATCTAGATGGGAAACATCGTTCTCTTTTTTTTTGGAC TAGTTTTTCGGAACGGTCACTCACGACTGTGAGATATCAGTCGACAAGTT GCCGCTGCTTGCTCAGTCTCGTATCATGAATTCCCCGTAACATTTTATAT CCTGGAGCTTGGATAGCAGTGTAAAGGCGGACTGAATTAGCGGATTGAGT GAGGATTCGACTTCACCTTGAATGCCCAATCGAAATCAAAACCAACACGA TTGCGAGATACGCGAATCTAGAGCAACTCTTCATGTGGCGATCTCATTTT CAGTCGTTGGAAGTTATATCTTCCGTGCGGATGGCGCATTACCCACGATA ATTGAATTTTTTCGGTTTGTAGCAGCATAGCCTCGTAGAGTGTCATTCTT CGCGGGCAACTTGCCTTGAAGAAGCACTGCTGGCGTGGACGTGGGACGTG CTGTGTATCCCCTTGCATTATTCCTCTTGTCTACTGCATTGTATTGCTTC GTGCGGTCATCTGTATCTTACCGATTTCGCTGTCCTTTCAGGTTACTGTG GGCGCAACGGAGGGTTTGCACGCTAGCCTTAGTGCGTTGGCAGGACCAGG GGATGAGGTGAGCTGTTGTACACGAGACATTCTTAGTTTTTGCCTAAAGC GTCGAATCTCCTACACAATCACCACATTATCTGCCTTTGTTGACAGATTC CCATGGCCAACTCCAAACCAAAGCCCCCCACTCAGATCGAAGAGAATATA CAGTGCTGTGTGCGACGTATGACATGTTTCCTCGCGTCTCGATCACGGTG ACGCCGGTTTTGTACACTGCACGCAGGTGGTGATGTTCAATCCAGGCTTC CCGTGGTACGCTACGACAATCCGACTCGTTGGAGCGACCCCTGTGCTGAT TCAGCTGAAAAGCCCCGACTTTGCCCCGGACATGGCAGAGGTGGGAAGGC GACCTGGCCCGTCTTGCTCTCAACACCCTTTGGATGTTTTGCTGCCTTTT CCTGTACTATTTTTTTTGTGAAACTGTTTTGATTTATCCGCAGAATATGA CCGTGAGTGTGGATCGGTAGATCAATGCGGATGAGAAGTCTCTTTATCTG TAGTATCTTTGGCGCGAGAAGTTACAGATATCGTCTTGTTGAGGCAAGGA GTGTGGTTAGCATTGCTGTGTGAGAGTTGATGCTAGGCGCACTCCAGTAC TTGTCGCACTAGACGAAGATTTTCCGCCCGAGTTTCTTGCGAAGGATTTT TTTTCACTTTGGATATGAGCAACTTAACCTCGCTTTCTTGAAAAGGCGCA CGTTCGGACTCACAGAGTGCGCGCGTAGCACATTTCGCCCACCAGGTTGT CTCTCCAAGAATCGAGGGCTATCTCCAAGAAAGCAACAAACAGTGCTTAT TGGTTGTACATCGCTTGTGCGTTCTGATGTACCATACGATCACAACAAAT CTCGCGCTGCTTTGTTCGCTGAATGGCTAGCCACTTCCTTTTTCACTTTG CCTTGCTTGGCCACCTTTTTCGTTTGCTGCGTGACAATGTATTTGCTGTT TCATAGGTGGAGAAGGCCATCACGCCCAGGACAAAGGTACTGCTTCTCAA CACGCCGCACAACCCTTGCGGGCACTGCTACACCAAAGAGGTAAGGCGAT GCGCGAGTATCGTATGGCTGCTTTGACTCGGCCTCCTACTATGAGTGTGG CGTGTTCGACTGGTTCCCCACGACGCACCGTGTTTGTCTGGATGCCTCTA AATGCTCGCCGTGCCCAGACCACTGTCATCAATTGCATACGATGTGCACT TCCACAATACCTTCTTGCGCTTTTCACTCCGTGCGATGATGCACTAGCTC CAAGAGCTCATATCTGCGGCCGGGGGAAAGGGAAGTGTTTTCTTGCACTG GGCGGCATGAATACGCGGTGCTGTCGGATTCAGCGGTGGATGGTAATTGT GTCGCTGTTTCGTGTACAATGTACTGCTACCCAGGCGGTGGTCAAATGTT CCCCGTTTCTTGTGTCGGTGTGTGTTTGTTCGCGCCAGGAGCTAGAATGC TTCGCCAAGCTGGCCGTGAAGCACAACCTCTACGTTATAAGCGATGAGGT AAGATCAATGTTACAATCCAAGCGCGGCCTTTGTTTTTTACTGAACGCGG TTGTGTTTGTTTGAAAGCATCGCTTGCTCTCAGCAGCAGGGAAAAACGAT GTCAAGCATCCCCAATCCAATGACACGGTTCTAGCAGTTCTCCACACACC ATTGTAATTGTTGCGCCACCGATCACAACGTTTGAATATTAAAGGATGAT TTTGGAAAGGAGGGTGGCGATGACATGGGTTTGTTTCCCTTGGTTCGATC GGTTCGTGGGTACCGTCACTCAACAGTCCCCTTCTTATTCCCATCCCCCT TTCATCACATGGCCGGAAGCTTGTTGCTGCTTCCCCGGCGTACCAAATCC ACCCTCCAACGGTTACACCTCTTAACGTGTGTTGCAAACCCGCGAAACGA AGGTGTACGAAAACGTCACGTTTGATGGAGTGAAGCACCTGCGCATCGCG GACGAGGAAGGCATGTTCGAACGCACCATCACCTTGTGCAGCGCCTCCAA GCTCTTCTCTCTCACCGGTGAGAAGACCATGTGACCTCAAACTTTACTTC ACCGAATCGCGCGATACTTGCATTTTTCACCACTGGAGCAAATAGAGTAC ACCATTTTGGGCCAAAAATCAGAATAAATTGAGAACCCGTAAGGTCATGC CTTCACCCGGTTTTCCTTTATTATGGAAAATTCGCGCCGTCGATAGCTGA TGATCCGCTTGGTATGACCGGCCTGGTAATTTCCATTTGGTACGACGGGG GTATCGATGGGCAACATTTTCACAAGCGCCTGAATTCGTTCGATCGCCGA TTGAGATCTTGATGGTGAAGCGTGGCCGCTCTGCTGTTGCTCGATTCGGA CGAATTGGTTGCTCTCTCTCTGCAACAAATATTGGTTGACCTATCAAATA TCGTATACACGGCGCTATCACTGTCCGCTTCCAGCAGTGACTGCAAAAAA AACGCGCCTGAAGGTGCTAGTATTACGCAACGTGTGGCTCTCGAGGGCTG TCAGTTAACGTTGCTTCCTCGTTACCGAAGGCGCTATCAATGGGACGACT TGTGACAGACATAAGTATAAGTGTATTGAGGGTGTTCCCCACGTGTTGAT TAATTACAGGCTGGCGAGTAGGATGGGCCCTGTCAACTCCGAAGATCCTC AAGGGCCTTATGGTGCATCACACGTGCACATCCTATTGCTCACCTTCGCC CCTTCAACACGGCTTGTCCGTGGCGCTCGATATAGAAGACGGGGCTTTCG AGGTGCGTTGGTGGATTCGTGTATTTAGCTAGCACTTTCAGCGTCGGAGT AGGCTATTTCGCAACAAATAATGGATTATGACAGTTATGTAGAGCGCTGC AGTCGCTGTCCTCAGAACATTGCCAACTCGCTGCCTGTGCTGTATGTGCT GACTGTACCACCGGACTAGTTATCTGAACAGCGGTGGCTCATTATCAAAT GATGGATTATGGCGTTTATGTAGAGCTCTGCAGTCGCTGTCCTCAAAACC ATGCCAAATTCCTGCCTGTGCCGTATGTGCTGTCTGTACCACTGGACTAT CTATCTGGACAGTACCGGCTCGTTATCCCCATTATGATATCATGGGCATT GTTCGCTCCTCTCCTTTGGGGCGGGGATATGTGGGGATTCCGTTGAAATC GGTGCGCAATGGCTTAATCCGGTACCGGCGGTTGGCGGTTGGGAGGGAAA GTTGATGGCATAGGCTGACCATCGTAGGATGTGCCGTACCCCATGCCGAA GATGTTATGTTTATAGCAACCTTTTCTCTTGGAATTATCAAAGTGTTTTC CCGTTATCGCCTCAACCTTTGTTCGCCCTATCATTCTCGTCTGCATCAAG TTCATTGTTGTATCGTCCCTTGCTTGCCACCGATATTTTTATGTTCGCCA CGATGCATCATTCTGGGGACAGGGTATTCCGGCCTTGATTGAGGGCAACG CAAGGGTGCTCGGTGACGTTTTGAGGGAAAAGGGTTTCGGAGTGACGCAG CCCCAGGTTGGTGATAACAACGATGATTCGAGAAACATTTTCCCTTTCGA CGGCCCACTGTGCCAGTTCTCAAACGTTTGGTTTTTGTGACTGAGGACTT TACTGTGCAATAGTAGTACTTGCTTTCCAATTTGTCGAGTGAACGGTTCT AGGTGAAGTCAAGCTAAACCCTTTTCCTGTCATTGAAGCGGGCGACTGTG ATGAGCAAAGCTGTCGGGGGGCACAGCCATCGCGATGCGTAGATAATTTC GTCGGAAATATGTTCTTGCCTCGTCTCCTTGCAAAGTTGAGACGTGATCC TTGTCTTCCACACACCGAAACCAGCTGTTTTGGGTCCGAAGTATTTGTTA CCCTTTGCCTTGAGAAAAAGAAACGAATATGCCTCCGGTTTGCTGCGCTT GACTTTGAAGGGAGGACATTTCCTCGTGGCAGACACTGCGCCGCTGGGGA TGAAGGGCTTCGAGTGCGCCAAGCTGTTACTCACACAGGCCAAGGTGATG GTCGTAGATAAACAGTGAAGAGGTTCTGCTTTCACAAGACAGGTATCCGT GTGGATCGCCCGTTTTTTACCGGGTCTAGTCTTGAAGTATCCAAGGGAAG TATTACTTTCTGCGGGAATTATTTCATGTGACCGGGACTGACAAACCAAG CTTGGGTAATAAATCTCTTCCGTGGTAGTGATAAACCCGATTCGGGGTTC GTGACAACACTGCCCCTACGCAGGGTAATGACAGCGTTTGATTTTAGTGT ATTTTGCGTCCTTGCGTACCAGCTAATTTTGAGTTGTTGTGTTCAGGCTT CGTTCTTATATGGGAATGTGGCACGAAGCAGCCAATACATACAAGTATAT TTTTTCCGGTCTTCATGTCGATCAAGTTCATCAAGATATTTACTCATCCA TCCAAATTCTCCATCTCCTCGCTATAATAGAGCTCCGTACAAGAGGTAAA ACGAATACAGTAGGCTCATGATTCCTTTCAACTTCCCGCAGGTGGTGGTT GTTCCTGGACTGATCTTTTACGCTGCCGATCCGAACGGCGGAGAGGGGAT GGACCTCGATTATCCCCTGCTACGGTTCGCCATCTGCAAGCGAAGGGAAA CAATCGAAGACGTAGTACAACGCATACGAGCAATGGAGTTTCCCACTTCT AGCAAGTCGAAATCTTAGCGTAATTTTGATACGGGTATTTATGATCCCGC ACCCAAACCATACGGGTCGGATCGGGAAATTGATTGTGGGATAAGAGACA GGACAGGGAGGAGATAGGCATGTTGATTGCGCCCTGTCATCGTTGGGCTT GGCTACGCATATGAGGAAAATCTTTGAGGCGCCTTGCCGCTGCATCGCAC CTCCAAGCGAAGTTATACCAGGATCATAAGTGGTTTTAAGTTGCCATCTT CCGGGTTTTCTCTCGCCCGGCGCACGTCAGCGGCCTGGAGCACAAATGCT GGAAGCGAGTGGAAGCTTGTGCAAGCTCTAGGCTGTGATGTCTCACGTAG TTCGTAATCAACTGGTGTTAAAAGTACATTTTACTGTTTGCACACCCCTA AAGAAGCAGCAGCGCGTGCAGCGTTTTCGCGTCTTGAATAAAAAAATCAA CTTTGGTACTTCCTCG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig13585:2..6667+

>mRNA_H-paniculata_contig13585.2213.1 ID=mRNA_H-paniculata_contig13585.2213.1|Name=mRNA_H-paniculata_contig13585.2213.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2238bp|location=Sequence derived from alignment at H-paniculata_contig13585:2..6667+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTTCAAAGCAATCAACAATTTATCCCTGTCTGCTCGCTTGTGTCCAT
CGCATTTCAGAGCATGCTCAATCAGTACAGCATGCCCCAAGGCCTAAAGT
CGTTGCAGGCCTCAGTAAGTGCGTATTACAACAAGTGCTATGGGCTCCAG
GAAGGAGCGGCAAAGAGAGCGCTCAAACCGGAGAACGTTCTGATGTTTCA
AAGCAATCAACAATTTATCCCTGTCTGCTCGCTTGTGTCCATCGCATTTC
AGAGCATGCTCAATCAGTACAGCATGCCCCAAGGCCTAAAGTCGTTGCAG
GCCTCAGTAAGTGCGTATTACAACAAGTGCTATGGGCTCCAGGAAGGAGC
GGCAAAGAGAGCGCTCAAACCGGAGAACGTTCTGGTTACTGTGGGCGCAA
CGGAGGGTTTGCACGCTAGCCTTAGTGCGTTGGCAGGACCAGGGGATGAG
GTTACTGTGGGCGCAACGGAGGGTTTGCACGCTAGCCTTAGTGCGTTGGC
AGGACCAGGGGATGAGGTGGTGATGTTCAATCCAGGCTTCCCGTGGTACG
CTACGACAATCCGACTCGTTGGAGCGACCCCTGTGCTGATTCAGCTGAAA
AGCCCCGACTTTGCCCCGGACATGGCAGAGGTGGTGATGTTCAATCCAGG
CTTCCCGTGGTACGCTACGACAATCCGACTCGTTGGAGCGACCCCTGTGC
TGATTCAGCTGAAAAGCCCCGACTTTGCCCCGGACATGGCAGAGGTGGAG
AAGGCCATCACGCCCAGGACAAAGGTACTGCTTCTCAACACGCCGCACAA
CCCTTGCGGGCACTGCTACACCAAAGAGGTGGAGAAGGCCATCACGCCCA
GGACAAAGGTACTGCTTCTCAACACGCCGCACAACCCTTGCGGGCACTGC
TACACCAAAGAGGAGCTAGAATGCTTCGCCAAGCTGGCCGTGAAGCACAA
CCTCTACGTTATAAGCGATGAGGAGCTAGAATGCTTCGCCAAGCTGGCCG
TGAAGCACAACCTCTACGTTATAAGCGATGAGGTGTACGAAAACGTCACG
TTTGATGGAGTGAAGCACCTGCGCATCGCGGACGAGGAAGGCATGTTCGA
ACGCACCATCACCTTGTGCAGCGCCTCCAAGCTCTTCTCTCTCACCGGTG
TACGAAAACGTCACGTTTGATGGAGTGAAGCACCTGCGCATCGCGGACGA
GGAAGGCATGTTCGAACGCACCATCACCTTGTGCAGCGCCTCCAAGCTCT
TCTCTCTCACCGGCTGGCGAGTAGGATGGGCCCTGTCAACTCCGAAGATC
CTCAAGGGCCTTATGGTGCATCACACGTGCACATCCTATTGCTCACCTTC
GCCCCTTCAACACGGCTTGTCCGTGGCGCTCGATATAGAAGACGGGGCTT
TCGAGGCTGGCGAGTAGGATGGGCCCTGTCAACTCCGAAGATCCTCAAGG
GCCTTATGGTGCATCACACGTGCACATCCTATTGCTCACCTTCGCCCCTT
CAACACGGCTTGTCCGTGGCGCTCGATATAGAAGACGGGGCTTTCGAGGG
TATTCCGGCCTTGATTGAGGGCAACGCAAGGGTGCTCGGTGACGTTTTGA
GGGAAAAGGGTTTCGGAGTGACGCAGCCCCAGGGTATTCCGGCCTTGATT
GAGGGCAACGCAAGGGTGCTCGGTGACGTTTTGAGGGAAAAGGGTTTCGG
AGTGACGCAGCCCCAGGGAGGACATTTCCTCGTGGCAGACACTGCGCCGC
TGGGGATGAAGGGCTTCGAGTGCGCCAAGCTGTTACTCACACAGGCCAAG
GGAGGACATTTCCTCGTGGCAGACACTGCGCCGCTGGGGATGAAGGGCTT
CGAGTGCGCCAAGCTGTTACTCACACAGGCCAAGGTGGTGGTTGTTCCTG
GACTGATCTTTTACGCTGCCGATCCGAACGGCGGAGAGGGGATGGACCTC
GATTATCCCCTGCTACGGTTCGCCATCTGCAAGCGAAGGGAAACAATCGA
AGACGTAGTACAACGCATACGAGCAATGGAGTTTCCCACTTCTAGCAAGT
CGAAATCTTAGGTGGTGGTTGTTCCTGGACTGATCTTTTACGCTGCCGAT
CCGAACGGCGGAGAGGGGATGGACCTCGATTATCCCCTGCTACGGTTCGC
CATCTGCAAGCGAAGGGAAACAATCGAAGACGTAGTACAACGCATACGAG
CAATGGAGTTTCCCACTTCTAGCAAGTCGAAATCTTAG
back to top