mRNA_H-paniculata_contig13568.2203.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13568.2203.1
Unique NamemRNA_H-paniculata_contig13568.2203.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: D7FGU0_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU0_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 1.320e-109
Identity = 174/261 (66.67%), Postives = 204/261 (78.16%), Query Frame = 1
Query:    1 QIRQIEGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESRRAGECLVAKMKRFMSPKCHALMLDEGE-FGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFREVFSAFSTKHRGFTSPKLAMHHALLEAEKVDGLGGKEVSRQGEGDAREGEAQRGRK---AKNPQLGVIRD--YARLRKVVGSSDAICLLQTLTS 765
            Q+R++EG +FPWCGVRFDT+TCEV+ANYSR+ K+ V+ES+TV+SRRAG CLV KMKRF+SPKCHALMLDEGE  G+NSR TVLLNVYEM+LVCAAKTA SALRLPRGP GN SLLSNGA++TT+YAYSLIQ+RSNRR G FGTS+G++CVCKIHR EVTWLGLHAFREVF AF+ K RGF   KL +  AL E     G G +  SR+     +EG A  G +     + Q GV R   Y RLR+VV S DA+ LLQTLTS
Sbjct:   44 QVRRVEGDMFPWCGVRFDTRTCEVMANYSRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNVYEMLLVCAAKTATSALRLPRGPAGNASLLSNGALETTAYAYSLIQNRSNRRNGSFGTSRGVRCVCKIHRSEVTWLGLHAFREVFGAFAMKDRGFARCKLDVERALRETAGSRGGGFEGFSRKIR-KGKEGAAAAGCEEGATSDTQHGVRRGRAYGRLRRVVRSPDALSLLQTLTS 303          
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: A0A6H5K5W1_9PHAE (Telomerase reverse transcriptase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W1_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 8.730e-107
Identity = 178/262 (67.94%), Postives = 204/262 (77.86%), Query Frame = 1
Query:    1 QIRQIEGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESRRAGECLVAKMKRFMSPKCHALMLDEGE-FGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFREVFSAFSTKHRGFTSPKLAMHHALLEAEKVDGLGGKEVSRQ----GEGDAREGEAQRGRKAKNPQLGVIRD--YARLRKVVGSSDAICLLQTLTS 765
            Q+R++EG +FPWCGVRFDT+TCEV+ANYSR+ K+ V+ES+TV+SRRAG CLV KMKRF+SPKCHALMLDEGE  G+NSR TVLLNVYEM+LVCAAKTA SALRLPRGP GN SLLSNGA++TT+YAYSLIQSRSNRRKG FGTS+G++CVCKIHRFEVTWLGLHAFREVF AF+ K RGF   KL +  AL E     G G    SR+     EG A  G    G    + Q GV R   Y RLR+VV S DA+ LLQTLTS
Sbjct:  413 QVRRVEGDMFPWCGVRFDTRTCEVMANYSRYSKTGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNVYEMLLVCAAKTATSALRLPRGPAGNASLLSNGALETTAYAYSLIQSRSNRRKGSFGTSRGVRCVCKIHRFEVTWLGLHAFREVFGAFARKDRGFARCKLDVERALRETAGFWGGGFDGFSRKMCKGKEGAAAAG--WEGGATPDTQHGVRRGRAYGRLRRVVRSPDALSLLQTLTS 672          
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: D7G4G6_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G6_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 5.000e-103
Identity = 175/261 (67.05%), Postives = 205/261 (78.54%), Query Frame = 1
Query:    1 QIRQIEGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESRRAGECLVAKMKRFMSPKCHALMLDEGE-FGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFREVFSAFSTKHRGFTSPKLAMHHALLEAEKVDGLGGKEVSR---QGEGDAREGEAQRGRKAKNPQLGVIRDYA--RLRKVVGSSDAICLLQTLTS 765
            Q+R++EG +FPWCGVRFDT+TCEV+ANYSR+ K+ V+ES+TV+SRRAG CLV KMKRF+SPKCHALMLDEGE  G+NSR TVLLNVYEM+LVCAAKTA SALRLPRG  GN SLLSNGA++TT+YAYSLIQSRSNRRKG FGTS+G++CVCKIHRFEVTWLGLHAFREVF AF+ K RGF   KL +  AL E     G G +  SR   QG+  A     + G  + + Q GV R  A  RL++VV S DA+ LLQTLTS
Sbjct:  612 QVRRVEGDMFPWCGVRFDTRTCEVMANYSRYSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNVYEMLLVCAAKTATSALRLPRGAAGNASLLSNGALETTAYAYSLIQSRSNRRKGSFGTSRGVRCVCKIHRFEVTWLGLHAFREVFGAFAMKDRGFARCKLDVERALRETAGSRGGGFEGFSRKVRQGKEGAAAAGCEEGATS-DTQHGVRRGRAHGRLQRVVRSPDALSLLQTLTS 871          
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: D7G5Y0_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y0_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 2.210e-85
Identity = 148/231 (64.07%), Postives = 174/231 (75.32%), Query Frame = 1
Query:   91 FFKSSVSESVTVESRRAGECLVAKMKRFMSPKCHALMLDEGE-FGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFREVFSAFSTKHRGFTSPKLAMHHALLEAEKVDGLGGKEVSRQGEGDAREGEAQRGRKAK---NPQLGVIRD--YARLRKVVGSSDAICLLQTLTS 765
            + K+ V+ES+TV+SRRAG CLV KMKRF+SPKCHALMLDEGE  G+NSR TVLLNVYEM+LVCAAKTA SALRLPRGP GN SLLSNGA++TT+YAYSLIQ+RSNRR G FGTS+G++CVCK HRF+VTW+GL AFREVF AF  K RGF   KL +  AL E     G G +  SR+     +EG A  G + +   + Q GV R   Y RLR+VV S DA+ LLQTLTS
Sbjct:    7 YSKAGVAESLTVDSRRAGACLVGKMKRFLSPKCHALMLDEGEHLGINSRNTVLLNVYEMLLVCAAKTATSALRLPRGPAGNASLLSNGALETTAYAYSLIQNRSNRRNGSFGTSRGVRCVCKNHRFQVTWVGLPAFREVFGAFPMKDRGFARCKLHVESALRETAGSRGGGFEGFSRKIR-KGKEGAAAAGWEEEATPDTQHGVRRGRAYGRLRRVVRSPDALSLLQTLTS 236          
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: UPI001B7DD0ED (telomerase reverse transcriptase n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7DD0ED)

HSP 1 Score: 87.8 bits (216), Expect = 5.780e-16
Identity = 60/163 (36.81%), Postives = 85/163 (52.15%), Query Frame = 1
Query:   16 EGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVE-SRRAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPG--GNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAF 495
            E TLFPWCG+ FDT+T EV  +YS +  +SV  S+T   S  AG+ L  K+   +  KCH + LD     VN+ +TV +NVY++ L+ A +  A  LRLP G G   N S       D  +  YS++++++     GF  + G       H     WL  HAF
Sbjct: 1259 EHTLFPWCGLLFDTQTLEVYCDYSSYANTSVRSSLTFNCSSEAGKNLRRKLLAVLRLKCHHIFLD---LEVNTLRTVSINVYKIFLLQAYRFHACVLRLPFGQGVRDNPSFFLEVISDMVACCYSILKAKNRGIPLGFKDASGPFPYEAAH-----WLCCHAF 1413          
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: UPI001CF1D80F (telomerase reverse transcriptase-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1D80F)

HSP 1 Score: 87.4 bits (215), Expect = 7.770e-16
Identity = 60/170 (35.29%), Postives = 89/170 (52.35%), Query Frame = 1
Query:    1 QIRQIE-GTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVE-SRRAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRG--PGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFR 498
            Q+++IE    FPWCG  FDT T EV  + SR+    + ++++V      G+ L  K+   + PKCH L+LD G   +NSR+++LL VY+  L+ A K  A A   P G  P  N S      +D   Y ++     S+R+     +SK       ++  EVTWL LHAF+
Sbjct: 1205 QVKRIEQNERFPWCGFLFDTVTLEVRCDISRYHGIQLRDTLSVSLDAHPGKALRRKLLCSVRPKCHPLLLDPG---LNSRESILLTVYQSFLLTAKKFCAYAKEFPLGGQPKDNPSFFCKLFLDLAQYFHAT----SSRKCRQLSSSKA---SFSLNEGEVTWLCLHAFK 1364          
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: A0A649UFI1_AMBME (Telomerase reverse transcriptase n=1 Tax=Ambystoma mexicanum TaxID=8296 RepID=A0A649UFI1_AMBME)

HSP 1 Score: 86.7 bits (213), Expect = 1.410e-15
Identity = 54/162 (33.33%), Postives = 87/162 (53.70%), Query Frame = 1
Query:   22 TLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESR-RAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLP--RGPGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVT-WLGLHAF 495
            ++FPWCGV FDT+T EV  +YSR+  +S+  S+T+  +   G  +  K+ R +  KC ++ LD     VNS +TV +N+Y++ L+ A +  A  ++LP  +G   N S   +   D     YS+++S++       G + G +  C    FE   WL  HAF
Sbjct: 1142 SVFPWCGVLFDTQTLEVYCDYSRYACTSIRSSLTISHKAETGTSMRHKLIRVLKLKCKSIFLD---LMVNSLRTVFINIYKIFLLQAYRFHACVIQLPFNQGVRKNPSFFLSVISDMAPCCYSILKSKN------IGIALGTKDACNTFPFEAAQWLSYHAF 1294          
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: A0A8B7PXA5_HIPAR (Telomerase reverse transcriptase n=2 Tax=Hipposideros armiger TaxID=186990 RepID=A0A8B7PXA5_HIPAR)

HSP 1 Score: 80.5 bits (197), Expect = 1.710e-13
Identity = 60/191 (31.41%), Postives = 92/191 (48.17%), Query Frame = 1
Query:   25 LFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESR-RAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPGGNGSLLSNGAI------DTTSYAYSLIQSRSNRRKGGFGTSKGLQCVCKIHRFEVTWLGLHAFREVFSAFSTKHRGFTSPKLAMHHALLE 576
            LFPWCG+  DT+T EV+ +YS + ++S+  S+T     +AG  +  K+ + +  KCH+L LD     VNS Q V  NV+++ L+ A +  A  L+LP     N  +  N A       DT S  Y+L+++++     G   + G           V WL LHAF    S  S  ++    P  A    L +
Sbjct:  921 LFPWCGLLLDTRTLEVLCDYSSYARTSIRASLTFSRGFKAGRSMRRKLFKVLRLKCHSLFLD---LQVNSLQMVCTNVHKIFLLQAYRFHACVLQLPF----NQQVRKNPAFFLRVISDTASRCYALLKAKNTGMLLGAKGAAG-----PFPSEAVKWLCLHAFLLKLSRHSVTYKCLLGPLQAAQSQLCQ 1099          
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: A0A401NGG8_SCYTO (Telomerase reverse transcriptase n=2 Tax=Scyliorhinus TaxID=7829 RepID=A0A401NGG8_SCYTO)

HSP 1 Score: 79.3 bits (194), Expect = 4.310e-13
Identity = 50/141 (35.46%), Postives = 77/141 (54.61%), Query Frame = 1
Query:   22 TLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESR-RAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPG--GNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKG 435
            +LFPWCG+ FDT+T EV  +YS +  +S+  S+T   R  AGE L  K+   +  KC  + LD     VN+ +TV +NVY++ L+ A +  A  LRLP G G   N S       D  +  YS++++++     G+  + G
Sbjct: 1074 SLFPWCGLLFDTQTLEVYCDYSSYANTSIRSSLTFNCRPEAGENLRRKLLAVLKLKCQHIFLD---LEVNTLRTVSINVYKIFLLQAYRFHACVLRLPFGRGVRDNPSFFLGVVSDMVACCYSILKAKNRGILLGYKDASG 1211          
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Match: UPI0009A333D9 (telomerase reverse transcriptase n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A333D9)

HSP 1 Score: 79.0 bits (193), Expect = 5.940e-13
Identity = 51/143 (35.66%), Postives = 77/143 (53.85%), Query Frame = 1
Query:   16 EGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVE-SRRAGECLVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASALRLPRGPG--GNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKG 435
            E +LFPWCG+ FDT+T EV  +YS +  +S+  S+T   S  AG+ L  K+   +  KCH + LD     VN+ +TV +NVY++ L+ A +  A  LRLP G     N S       D     YS++++++     GF  + G
Sbjct: 1247 EHSLFPWCGLLFDTQTLEVYCDYSSYANTSIRSSLTFSCSSEAGKNLRRKLLAVLKLKCHHIFLD---LEVNTLRTVNINVYKLFLLQAYRFHACVLRLPFGQRVRDNPSFFLEVISDMAVCCYSILKAKNRGIPLGFKDAAG 1386          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13568.2203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FGU0_ECTSI1.320e-10966.67Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
A0A6H5K5W1_9PHAE8.730e-10767.94Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
D7G4G6_ECTSI5.000e-10367.05Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
D7G5Y0_ECTSI2.210e-8564.07Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
UPI001B7DD0ED5.780e-1636.81telomerase reverse transcriptase n=1 Tax=Carcharod... [more]
UPI001CF1D80F7.770e-1635.29telomerase reverse transcriptase-like n=1 Tax=Acro... [more]
A0A649UFI1_AMBME1.410e-1533.33Telomerase reverse transcriptase n=1 Tax=Ambystoma... [more]
A0A8B7PXA5_HIPAR1.710e-1331.41Telomerase reverse transcriptase n=2 Tax=Hipposide... [more]
A0A401NGG8_SCYTO4.310e-1335.46Telomerase reverse transcriptase n=2 Tax=Scyliorhi... [more]
UPI0009A333D95.940e-1335.66telomerase reverse transcriptase n=1 Tax=Rhincodon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13568contigH-paniculata_contig13568:1942..5027 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.9
Seed ortholog evalue5.4e-88
Seed eggNOG ortholog2880.D7G4G6
Preferred nameTERT
KEGG koko:K10626,ko:K11126
KEGG Pathwayko05165,ko05166,ko05200,ko05225,ko05226,map05165,map05166,map05200,map05225,map05226
Hectar predicted targeting categoryother localisation
GOsGO:0000723,GO:0006139,GO:0006259,GO:0006278,GO:0006725,GO:0006807,GO:0006996,GO:0007004,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010833,GO:0016043,GO:0018130,GO:0019438,GO:0032200,GO:0034641,GO:0034645,GO:0034654,GO:0042592,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0051276,GO:0060249,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576
EggNOG free text desc.telomerase RNA reverse transcriptase activity
EggNOG OGsKOG1005@1,KOG1005@2759
EC2.3.2.27,2.7.7.49
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko04121
Exons4
Model size774
Cds size774
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13568.2203.1prot_H-paniculata_contig13568.2203.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13568 1942..5027 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929073.1938586-CDS-H-paniculata_contig13568:1941..20301622929073.1938586-CDS-H-paniculata_contig13568:1941..2030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13568 1942..2030 +
1691480721.4134376-CDS-H-paniculata_contig13568:1941..20301691480721.4134376-CDS-H-paniculata_contig13568:1941..2030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13568 1942..2030 +
1622929073.2140963-CDS-H-paniculata_contig13568:2405..25701622929073.2140963-CDS-H-paniculata_contig13568:2405..2570Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13568 2406..2570 +
1691480721.424542-CDS-H-paniculata_contig13568:2405..25701691480721.424542-CDS-H-paniculata_contig13568:2405..2570Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13568 2406..2570 +
1622929073.2318895-CDS-H-paniculata_contig13568:3010..32091622929073.2318895-CDS-H-paniculata_contig13568:3010..3209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13568 3011..3209 +
1691480721.433938-CDS-H-paniculata_contig13568:3010..32091691480721.433938-CDS-H-paniculata_contig13568:3010..3209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13568 3011..3209 +
1622929073.249598-CDS-H-paniculata_contig13568:4706..50271622929073.249598-CDS-H-paniculata_contig13568:4706..5027Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13568 4707..5027 +
1691480721.4424-CDS-H-paniculata_contig13568:4706..50271691480721.4424-CDS-H-paniculata_contig13568:4706..5027Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13568 4707..5027 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13568.2203.1

>prot_H-paniculata_contig13568.2203.1 ID=prot_H-paniculata_contig13568.2203.1|Name=mRNA_H-paniculata_contig13568.2203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp
QIRQIEGTLFPWCGVRFDTKTCEVIANYSRFFKSSVSESVTVESRRAGEC
LVAKMKRFMSPKCHALMLDEGEFGVNSRQTVLLNVYEMMLVCAAKTAASA
LRLPRGPGGNGSLLSNGAIDTTSYAYSLIQSRSNRRKGGFGTSKGLQCVC
KIHRFEVTWLGLHAFREVFSAFSTKHRGFTSPKLAMHHALLEAEKVDGLG
GKEVSRQGEGDAREGEAQRGRKAKNPQLGVIRDYARLRKVVGSSDAICLL
QTLTSGE*
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mRNA from alignment at H-paniculata_contig13568:1942..5027+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13568.2203.1 ID=mRNA_H-paniculata_contig13568.2203.1|Name=mRNA_H-paniculata_contig13568.2203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3086bp|location=Sequence derived from alignment at H-paniculata_contig13568:1942..5027+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATTCGTCAAATTGAAGGCACCCTGTTTCCCTGGTGTGGCGTGCGTTT CGATACCAAAACGTGTGAGGTCATCGCCAACTACTCCAGGTAGGCAGGTG TCTGCTGGAATACTGTACTTTAAACGCAACACAACAATGTGCACGACCAT ACTGGGCCGCGATTATCAAGCACATCACAGTACAACATGCCATGGCCATC GAAGCACGTCAGTGATGGCATGATGCTGCCGGGCACAAACCGCTGAGCAC TACGATACGGTACCACATATGTTGCAGTAAATGCAGGGCAACATAGACTA CTGCAAGATACTGCAGTGCCCAAGTCCTGCTCAGCAATGCCTGCGCACAA CACTGGTCTAATAGTAGAGCTAGAGTAATGGAGTCACACGGGCTGGAAGT AATCCCTGGTGACTTAGCCATTTTGTTCAAGTAGTCGTGTTCCATGTGGT CCTCGTTCCGAAAGATTCTTCAAGTCCAGCGTGTCCGAGTCGGTGACTGT GGAGTCCAGGCGGGCGGGTGAGTGTTTGGTGGCGAAGATGAAGCGGTTCA TGTCTCCCAAGTGCCATGCGCTCATGCTCGACGAGGGGGAGTTTGGAGTC AATTCTAGACAGACCGTCCTTCTCAATGTGTGAGTGTATCTCAGTCGCAG TGTCTCTAGTTTTGAGGAGAAAAGGTTCATCGTGTTGTCGTTGTCATGGA TGTCGTCGTTGTTGCGTGTTGCGGGGTGAACGGTGGTGCAGTATGTATCT GAGCATTTCACTGGATTGACTCGTGGAGACATTACCCGTCTCAGCTTGGT TATATTAAAAAAGAAAGTGAACGGACTTGTGGAAACGTGTATTTATTCCC GTGGGCTGAAAAAAAATGTTCTCAACGTAATGAAACGGCAACGAATTGAG CGAAAATTATCACCTGAAAGATACTTTTCATGCGATCGCTTCCTCCTCCC TTTTGTCGCGAATCTGAAATACTATCTAGATTTGTTTGCACAAAAATCAT CCACGTGTGCTCTATTGCCCAATATATGTTGGGCCTCGTATACGGCTCGT CGTTCGCGTCGATATCTAGGTACGAGATGATGCTGGTGTGCGCAGCGAAA ACAGCAGCTTCGGCGTTACGATTGCCTCGTGGACCGGGGGGCAACGGATC GTTGCTGTCTAACGGTGCTATCGATACTACTAGCTATGCCTACAGTCTTA TACAGAGTCGGTCCAACAGACGCAAGGGCGGTTTCGGCACGTCAAAGGGG CTTCAATGCGTCTGCAAGGTAATACAGAAAGATATGGGAAATCATGAAAA ACTAGATTTTTCACATTTTGAACGGACGTTGGATCGCTTCATATCGGGAC GTTTATTTGCGGCATATTGTTTTGGGTAGTTTCATTCCGAAGACAAAACT TCGTACAAGTTTTTAAAAAAAGAAAAAAATGTTATCTCGGAGTTTTTTTC GGGCAAATGGGATTCACAGTTTCGGCAGACCCCCTCAGAGGGCCAGAGTA GGCGAAAGTGAACCCCCAATTTTGCTTGGCTGCTTTGGGCGGCCAAAATG CTGCAACTCGTACAAGTGATGTGCGTATGCGGAGTGTCCCACGATGATGG TATCCAATCACCATACATCATTGCAGCACGCACCCGTCACACCGCACACG CCAACAACACTGTTGAGCTGTCACGCTTCTTACGCTGCAGACACGACCGA GCTAGACGCGCGATGCCGAAGTGATACCTGCGATACTCCAGCTTCGAAGC AAAAGCTGAAAGTCCCCCAGCGAGGGGACGGTCAGCTGCTGCTGCAAGGC TGTCACATGTTGCTGCTGTTGTTATGGATGGCAATGGCTGAGATGACGAC CTATTCCATCCACACCTAGAAGTAAGCTTTGCGCAAGCGGCCGATTGCAG CATGCTTGTTGTGTTTAATGTTGAGAACGACAAGCCCAGACCGGAGCCTG CCCGCAGCAGTAAGGATTACTTTATAGCCGGCGTACCTTGACAACTCGCG GTGGAACGTGTACGACATACATCTTCCCTACTCCACCGTCCAATTCATTC CTGACTGTTGTATTCCTTCAGGTTCCACCCACAACTAGCGCGTTAATTTT TTTCTTTCTTCTTTTTTCCCCGGGCAGAAGTTACCACAGAAATATATTCA CTTCGTCAAAATAATCATGATGAGACGCGGTCTTAGTGGTGGTATTCCCA GGGACCACTTTTTTGTATCCGAAGTGATGAAAATACGACATGTGAAAATT TATTGCAAACATTAGGCAGTATCTTATAGGCGTCAGCATTTTACAAAGAA ACTTTTAGATACGATCCCATGTTGGGTCATCATGTATGTACCGGGCGGTC ATTGAAGTCCGATAATTTCCCACTATATATATATTTTTCGAAAATCAAAT GTTCGGCGCCCATAGGATGCGGCCTCAAGAGCCAATTTTCCTGCATTCGA TGCTCCTAAGGCATGTCGGTTACAAACAAGGCCTGGGTTTCCATTCCGAG GCCTTGGGCATGATATTTTTCGAAAGATCAGCCTCTTACATTCCGCCCAA TCTTCCCGATTTGATCGAATCCACTAAAAAAGGCGGTCGCGAATGACCCT TTAGGTGAGGGCTACAGTATTCTTACACAACAGGGAAAACTACTGGTTTC GTTCATGTTCCCTGACCGCCTTACTGATCAGCAACCCTATTGAAAGCAGC CCTCCCACGTTATGTCAAGCTGCATTCACCCACACCCTCGCGAAATTGCT TTTTTGCCCGTTCAGATCCACCGTTTCGAGGTAACCTGGCTAGGCCTTCA CGCCTTCAGGGAGGTGTTCAGCGCCTTCTCGACCAAGCACAGGGGCTTCA CGTCCCCCAAGCTAGCCATGCATCACGCACTTTTGGAGGCTGAAAAGGTC GACGGGCTTGGTGGGAAGGAGGTATCAAGGCAGGGTGAGGGTGATGCCAG AGAGGGGGAAGCGCAGAGAGGCCGCAAGGCCAAGAACCCTCAGCTGGGTG TTATCCGTGATTATGCCAGGCTGCGTAAGGTGGTGGGCTCGTCAGATGCG ATTTGTCTGTTGCAGACTCTAACTTCAGGCGAATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig13568:1942..5027+

>mRNA_H-paniculata_contig13568.2203.1 ID=mRNA_H-paniculata_contig13568.2203.1|Name=mRNA_H-paniculata_contig13568.2203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at H-paniculata_contig13568:1942..5027+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGATTCGTCAAATTGAAGGCACCCTGTTTCCCTGGTGTGGCGTGCGTTT
CGATACCAAAACGTGTGAGGTCATCGCCAACTACTCCAGCAGATTCGTCA
AATTGAAGGCACCCTGTTTCCCTGGTGTGGCGTGCGTTTCGATACCAAAA
CGTGTGAGGTCATCGCCAACTACTCCAGATTCTTCAAGTCCAGCGTGTCC
GAGTCGGTGACTGTGGAGTCCAGGCGGGCGGGTGAGTGTTTGGTGGCGAA
GATGAAGCGGTTCATGTCTCCCAAGTGCCATGCGCTCATGCTCGACGAGG
GGGAGTTTGGAGTCAATTCTAGACAGACCGTCCTTCTCAATGTATTCTTC
AAGTCCAGCGTGTCCGAGTCGGTGACTGTGGAGTCCAGGCGGGCGGGTGA
GTGTTTGGTGGCGAAGATGAAGCGGTTCATGTCTCCCAAGTGCCATGCGC
TCATGCTCGACGAGGGGGAGTTTGGAGTCAATTCTAGACAGACCGTCCTT
CTCAATGTGTACGAGATGATGCTGGTGTGCGCAGCGAAAACAGCAGCTTC
GGCGTTACGATTGCCTCGTGGACCGGGGGGCAACGGATCGTTGCTGTCTA
ACGGTGCTATCGATACTACTAGCTATGCCTACAGTCTTATACAGAGTCGG
TCCAACAGACGCAAGGGCGGTTTCGGCACGTCAAAGGGGCTTCAATGCGT
CTGCAAGGTACGAGATGATGCTGGTGTGCGCAGCGAAAACAGCAGCTTCG
GCGTTACGATTGCCTCGTGGACCGGGGGGCAACGGATCGTTGCTGTCTAA
CGGTGCTATCGATACTACTAGCTATGCCTACAGTCTTATACAGAGTCGGT
CCAACAGACGCAAGGGCGGTTTCGGCACGTCAAAGGGGCTTCAATGCGTC
TGCAAGATCCACCGTTTCGAGGTAACCTGGCTAGGCCTTCACGCCTTCAG
GGAGGTGTTCAGCGCCTTCTCGACCAAGCACAGGGGCTTCACGTCCCCCA
AGCTAGCCATGCATCACGCACTTTTGGAGGCTGAAAAGGTCGACGGGCTT
GGTGGGAAGGAGGTATCAAGGCAGGGTGAGGGTGATGCCAGAGAGGGGGA
AGCGCAGAGAGGCCGCAAGGCCAAGAACCCTCAGCTGGGTGTTATCCGTG
ATTATGCCAGGCTGCGTAAGGTGGTGGGCTCGTCAGATGCGATTTGTCTG
TTGCAGACTCTAACTTCAGGCGAATGAATCCACCGTTTCGAGGTAACCTG
GCTAGGCCTTCACGCCTTCAGGGAGGTGTTCAGCGCCTTCTCGACCAAGC
ACAGGGGCTTCACGTCCCCCAAGCTAGCCATGCATCACGCACTTTTGGAG
GCTGAAAAGGTCGACGGGCTTGGTGGGAAGGAGGTATCAAGGCAGGGTGA
GGGTGATGCCAGAGAGGGGGAAGCGCAGAGAGGCCGCAAGGCCAAGAACC
CTCAGCTGGGTGTTATCCGTGATTATGCCAGGCTGCGTAAGGTGGTGGGC
TCGTCAGATGCGATTTGTCTGTTGCAGACTCTAACTTCAGGCGAATGA
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