mRNA_H-paniculata_contig1351.2173.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1351.2173.1 vs. uniprot
Match: D8LEE1_ECTSI (NADH:ubiquinone oxidoreductase complex I n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE1_ECTSI) HSP 1 Score: 733 bits (1892), Expect = 3.360e-254 Identity = 378/524 (72.14%), Postives = 425/524 (81.11%), Query Frame = 3 Query: 15 PTPKGPTDAVLVLGGTGKTGQRVVKALLAQGRQVVLAARDKDRTQQLFDESTPGLFMQYGVDVRDKTSLNDAKLFEGVSQVVSTMGPRFGEEGSSSEVVDFLGVQSAVEAAEAFFSCGDGQKSHPGCAVVEEALVRVDSSDGGDLTGGVRGPGGKWEPLDDVIMGGRSSSIWQAGVGRGALEARSEEGTFGRWAGTLVEEGGGFCGTVVKASTNMPFDASGFDGIRLRVRGDGNRYKFRLKPDTDLDKTPERQYQAVFDTVKGQWTEVDLPFESFVAVKRNYVDYSAPRVNAGATGGKMLSLGIVFSRFAFNEYANPKCTRGAFQLDVRDISLYKKPRPRFVLVSSASAERYNRLSEEERENDIPIVALNPGGILNWKYKAETHLRQSQLDYCIIRAAGLIPEGKEGDVPVRLQASQGDTISGRVSRDEVGQAAAAALGSPYATRKTLELRRDEAEDAVGKTPDFTVLFRGLVEDADRSLVSATGAGLPLAPFPIAQDPPPPVSEDRKQEILNDSRVKAQQQAT 1586 P+ +G TDAVLVLGGTGKTGQ+VV+ALL Q R VV+A+R K+ +L+D STPGLF+Q GVDVRD+ +L + LF+GV+QVVS +GPRFGEEGSSSE VDF GVQSA+EAAEAF GDG + PG E LV GD RGPGG W+PLDDVIMGGRSSS WQ GVG G LE +S + TFGRWAGTLV EGGGFCGTV+K +MPFDA+G+DGIR+RVRGDG+RYKFRLKPDT LD T ERQYQA FDTVKG+W EVDLPFESFVAVKRNYVD++APRVN G GGKMLSLG+V SRF FNEY NPK T GAFQLD+ +ISLYKKPRP FVLVSSASAERY+RL+EEER+NDIPIVALNPGGILNWKYKAET LR+S L +C++RA GLI EGKEGD VRLQ QGDT+SGRVSR+EVG AAAL S Y+ KT ELRRDEAEDA GKTPDFT LFRGLV D DRSL SA GA LPL PF I QDPPPPV+E+RKQEILND RVKA+ A+ Sbjct: 87 PSGRGCTDAVLVLGGTGKTGQKVVEALLKQKRDVVVASRSKESAAELYDASTPGLFVQSGVDVRDEATLKNKALFDGVTQVVSALGPRFGEEGSSSEAVDFQGVQSAIEAAEAFLEQGDGSSAAPGDQ--ERVLVAP-----GDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGK-TFGRWAGTLVTEGGGFCGTVIK---DMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWIEVDLPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNEYPNPKYTAGAFQLDLMEISLYKKPRPNFVLVSSASAERYHRLTEEERKNDIPIVALNPGGILNWKYKAETSLRKSSLRHCVVRATGLIAEGKEGDESVRLQMGQGDTLSGRVSREEVGSTVAAALSSSYSAGKTFELRRDEAEDATGKTPDFTSLFRGLVLDEDRSLASAGGASLPLPPFAIVQDPPPPVTEERKQEILNDPRVKARTAAS 599
BLAST of mRNA_H-paniculata_contig1351.2173.1 vs. uniprot
Match: A0A836CBF4_9STRA (NADH:ubiquinone oxidoreductase complex I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBF4_9STRA) HSP 1 Score: 439 bits (1130), Expect = 1.340e-140 Identity = 263/529 (49.72%), Postives = 325/529 (61.44%), Query Frame = 3 Query: 30 PTDAVLVLGGTGKTGQRVVKALLAQGRQVVLAARDKDR-TQQLFDES-TPGLFMQYGVDVRDKTSLNDAKLFEGVSQVVSTMGPRFGEEGSSSEVVDFLGVQSAVEAAEAFFSCGDGQKSHPGCAVVEEALVRVDSSDGGDLTGGVRGPGGKWEPLDDVIMGGRSSSIWQAGVGRGALEARSEEGTFGRWAGTLVEEGGGFCGTVVKASTNMPFDASGFDGIRLRVRGDGNRYKFRLKPDTDLDKTPERQYQAVFDTVKGQWTEVDLPFESFVAVKRNYVDYSAPRVNAGATGGKMLSLGIVFSRFAFNEYANPKCTRGAFQLDVRDISLYKKPRPRFVLVSSASAERYNRLSEEERENDIPIVALNPGGILNWKYKAETHLRQSQLDYCIIRAAGLIPEGKEGDVPVRLQASQGDTISGRVSRDEVGQAAAAALGSPYATRKTLELRRDEAEDAVG--KTPDFTVLFRGLVEDADRSLVSATGAGLPLAPFPIAQDPPPPVSEDRKQEILNDSRVKAQQQATEEGKAA 1604 P DAVLV+G +G+ G+ VVK LLA GR VV A R + + T+ L D + GL+++ G+DV + FEGV+QVVS +GP F + ++E VD+ G + + A E G S A L D G P +W PLDDVIMGG+SSS W A G + F RW+G LV +GGGFCGTVVK + FD +G+DGIRL VRGDG+R+KFRLKP D+ + E QYQA FDTV G W +LPF +F AV+RN V Y+AP V+ G +G KM S+GIV SRF +NEYAN KC G F LDVR I LY+ RP VLVSSA AER NRL+ EER DIPIV LNP GILNWK+KAET LR S + Y I+RAAGL+P G +GD P LQ Q D SGR++R E+ +A AA L SP+AT KT E+RRDE+EDA G P LV D DR++ + L PFP A+DPPPP Q IL+D RV+AQQ +GK A Sbjct: 62 PKDAVLVIGASGRAGREVVKELLASGRSVVAAGRTQSKITEALGDAAGARGLWVKEGLDVTAEEI--PETFFEGVTQVVSCLGPSFSDPALNAEAVDYRGNAAVLRACERA-----GLASTAAAAAASAPLC--------DFASGASLP--EWAPLDDVIMGGKSSSAWDAAAG---------DRDFARWSGELVTDGGGFCGTVVK---KLNFDTAGYDGIRLVVRGDGSRFKFRLKP-ADMAQANEYQYQASFDTVDGAWVTAELPFSAFTAVRRNDVIYAAPPVDKGPSGTKMSSIGIVLSRFEYNEYANYKCKPGPFSLDVRAIELYRHARPAVVLVSSAGAERVNRLTAEERAKDIPIVQLNPQGILNWKFKAETALRTSGVPYAIVRAAGLLP-GAKGDGPRLLQLGQADRFSGRITRAELAKAVAATLNSPHATGKTFEVRRDESEDAAGVDPLPTLPAQLAALVPDRDRAVRA-------LPPFPAARDPPPPPDAAGVQAILSDPRVRAQQ--ARDGKGA 550
BLAST of mRNA_H-paniculata_contig1351.2173.1 vs. uniprot
Match: K8YU42_NANGC (Nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YU42_NANGC) HSP 1 Score: 360 bits (925), Expect = 1.100e-108 Identity = 242/562 (43.06%), Postives = 320/562 (56.94%), Query Frame = 3 Query: 45 LVLGGTGKTGQRVVKALLAQGRQVVLAARDKDRTQQLFDES--------TPGL-FMQY--GVDVRDKTSLNDAKL---FEGVSQVVSTMGPRFGEE---------GSSSEVVDFLGVQSAVEA---AEAFFS--CGDGQKSHPGCAVVEE--ALVRVDSSDGGDLTGGVRGPGGKWEPLDDVIMGGRSSSIWQAGVGRGALEARSEEGTFGRWAGTLVEEGGGFCGTVVKASTNMPFDASGFDGIRLRVRGDGNRYKFRLKPDTDLDKTPERQYQAVFDTVK--------GQWTEVDLPFESFVAVKRNYVDYSAPRVNAGATGGKMLSLGIVFSRFAFNEYANPKCTRGAFQLDVRDISLYKKPRPRFVLVSSASAERYNRL-SEEERENDIPIVALNPGGILNWKYKAETHLRQSQLDYCIIRAAGLIPEGKEGDVPV--RLQASQGDTISGRVSRDEVGQAAAAALGSPYATRKTLELRRDEAEDA-----VGKTPDFTV-----LFRGLVEDADRSLVSATGAGLPLAPFPIAQDPPPPVSEDRKQEILNDSRVKAQQ 1577 +V G TG+ G+ +V+ALL +G VV A R++ + ++F S +PG + Y G+DV + +L+ K+ + VV +GP G + G +SE VDF GV ++A A+ G+G K V E L R ++ + D+ KW+ LDDVIMGG+SSS +LE E+G + + G+LV EGGGFCGT + D SGFDG+ LRVRGDG+RYK LK L E YQA FDT+ G W + +PF F V RN VDY A + + +SLG+V+SRF FN ANP GAF L + +I+LY+ RP VLVSSA AER ++ +EE+R+ +IPIV LNPGGILNWKY+AET+LR S L Y I+R GL+PE GD P +LQA QGDTI+GR++R ++G A AAAL SPY+ KT+E+RRDEA DA VG+ P T LF+ LV D DR++ +G L PFP A DPP VS +R +EILND RVKAQQ Sbjct: 119 VVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPE--DVA--------KWQRLDDVIMGGQSSS---------SLELDREKG-YATYTGSLVVEGGGFCGTRASGG-DASVDLSGFDGVTLRVRGDGHRYKLNLKTTETL--ASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAA--VSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSG----LLPFPEAVDPPQEVSPERAKEILNDPRVKAQQ 651
BLAST of mRNA_H-paniculata_contig1351.2173.1 vs. uniprot
Match: A0A4D9DB39_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB39_9STRA) HSP 1 Score: 342 bits (878), Expect = 1.770e-102 Identity = 243/607 (40.03%), Postives = 321/607 (52.88%), Query Frame = 3 Query: 45 LVLGGTGKTGQRVVKALLAQGRQVVLAARDKDRTQQLFDES-----TPGLF----MQY--GVDVRDKTSLNDAKL---FEGVSQVVSTMGPRFGEE---------GSSSEVVDFLGVQSAVEA---AEAFFS--CGDGQKSHPGCAVVEE--ALVRVDSSDGGDLTGGVRGPGGKWEPLDDVIMGGRSSSIWQAGVGRGALEARSEEGTFGRWAGTLVEEGGGFCGTVVKASTNMPFDASGFDGIRLRVRGDGNRYKFRLKPDTDLDKTPERQYQAVFDTVK--------GQWTEVDLPFESFVAVKRNYVDYSAPRVNAGATGGKMLSLGIVFSRFAFNEYANPKCTRGAFQLDVRDISLYKKPRPRFVLVSSASAERYNRL-SEEERENDIPIVALNPGGILNWKYK--------------------------------------------AETHLRQSQLDYCIIRAAGLIPEGKEGDVPV--RLQASQGDTISGRVSRDEVGQAAAAALGSPYATRKTLELRRDEAEDA-----VGKTPDFTV-----LFRGLVEDADRSLVSATGAGLPLAPFPIAQDPPPPVSEDRKQEILNDSRVKAQQQ 1580 +V G TG+ G+ +V+ALL +G VV A R++ + ++F S TP + Y G+DV + +L+ + + S VV +GP G + G +SE VDF GV ++A A+ G+G K V E L R ++ + D+ KW+ LDDVIMGG+SSS +LE E+G + + G+LV EGGGFCGT + P D SGFDG+ LRVRGDG+RYK LK L E YQA FDT+ G W + +PF F V RN VDY A + + +SLG+V+SRF FN ANP GAF L + +I+LY+ RP VLVSSA AER ++ +EE+R+ +IPIV LNPGGILNWKY+ AET+LR S L Y I+R GL+PE GD P +LQA QGDTI+GR++R ++G A AAAL SPY+ KT+E+RRDEA DA VG+ P T LF+ LV D DR++ +G L PFP A DPP VS +R +EILND RVKAQQ+ Sbjct: 22 VVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASLGHGLLDYISGIDVTNAATLSSGNVPAVLKEASHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKQAAGEVEERKRTLFRFETPE--DVA--------KWQRLDDVIMGGQSSS---------SLELDREKG-YATYTGSLVVEGGGFCGTRASGG-DAPVDLSGFDGVTLRVRGDGHRYKLNLKTTETL--ASENVYQAAFDTLPLQDAGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAA--VSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRSVQRDRERKREDGRPDVVCAVESPACAFASVFFNTPLLFSSFPSAETYLRASPLPYIILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQTLVADKDRAVSGTSG----LFPFPEAVDPPQEVSPERAKEILNDPRVKAQQE 599
BLAST of mRNA_H-paniculata_contig1351.2173.1 vs. uniprot
Match: E1Z5W0_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z5W0_CHLVA) HSP 1 Score: 325 bits (834), Expect = 1.600e-95 Identity = 227/537 (42.27%), Postives = 298/537 (55.49%), Query Frame = 3 Query: 36 DAVLVLGGTGKTGQRVVKALLAQGRQVVLAARDKDRTQQLFDES------TPG----LFMQYGVDVRDKTSLNDAKLFEGVSQVVSTMGPRFGE--EGS-------SSEVVDFLGVQSAVEAAEAFFSCGDGQKSHPGCAVVEEALVRVDSSDGGDLTGGVRGPGGKWEPLDDVIMGGRSSSIWQAGVGRGALEARSEEGTFGRWAGTLVEEGGGFCGTVVKASTNMPFDASGFDGIRLRVRGDGNR-YKFRLKPDTDLDKTPERQYQAVFDTVKG-QWTEVDLPFESFVAVKRNYVDYSAPRVNAGATGGKMLSLGIVFSRFAFNEYANPKCTRGAFQLDVRD-ISLYKKPRPRFVLVSSASAERYNRLS--EEERENDIPIVALNPGGILNWKYKAETHLRQSQLDYCIIRAAGLIPEGKEGDVPVRLQASQGDTISGRVSRDEVGQAAAAALGSPYATRKTLELRRDEAEDAVGKT---PDFTVLFRGLVEDADRSLVSATGAGLPLAPFPIAQDPPPPVSEDRKQEILNDSRV 1565 DAVLV G TG+ G+ VV+ LLAQGR VV A R R + +F ++ PG LF++ GVD+ + +L+ +FEGVSQVV+ +G FG EG +SE VD GV + AA A C D + E +VR+ S++ DL KW+ LDDVIMGG+SSS G+ A +E+G+ W G L+ +GGGFCG K P D S +DGI LRV+ DG + +K +K + + PE YQA FDT G WT V +P+ FV VKR AP ++ ++ G+V+SRF FN + NP+ G F+L + I Y+ RP+ ++VSSA ER ++ EE R+ DIPIV LNPGG+LN KY E +R S L Y ++R GL E + GD L+A QGD ISGR+SR+E+ AALG+P A KTLELRR E+ DA GK D LF G ED R V L PFP PP PVSE+RK+EIL+D RV Sbjct: 102 DAVLVFGATGRMGRTVVQELLAQGRTVVAAVRSPGRARDVFGKAGLVEGRQPGGAGILFVESGVDITNPDTLSPL-MFEGVSQVVTAVGAVFGRTAEGQMGYLDDMTSERVDAAGVANVAAAAAA---CLDPAERR------SEGVVRMRSAE--DLQ--------KWQRLDDVIMGGKSSS----GL------AAAEDGSGAVWTGELIVDGGGFCGARTKPE---PLDLSAYDGIALRVKSDGGQTFKLNIKTEAQSE-VPEDTYQATFDTNPGGDWTSVFIPWHEFVLVKRARTVPGAPPIDPA----RIRQFGLVYSRFDFNGFPNPRYRAGKFELAIEGGIRAYRDARPQLLMVSSAGVERNAKVGNDEEARKKDIPIVQLNPGGVLNHKYTGEAAVRASGLAYSVLRPTGLTNESEPGDF--LLEAGQGDRISGRISREELSTVVVAALGTPAAAGKTLELRRQESADAAGKKMSQQDKLRLFLGAAEDRLRQRVG-------LEPFPAPVAPPAPVSEERKKEILSDVRV 591
BLAST of mRNA_H-paniculata_contig1351.2173.1 vs. uniprot
Match: A0A0D2N0U4_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N0U4_9CHLO) HSP 1 Score: 321 bits (822), Expect = 4.400e-95 Identity = 225/538 (41.82%), Postives = 287/538 (53.35%), Query Frame = 3 Query: 36 DAVLVLGGTGKTGQRVVKALLAQGRQVVLAARDKDRTQQLFD--ESTPG----------LFMQYGVDVRDKTSLNDAKLFEGVSQVVSTMGPRFGE---------EGSSSEVVDFLGVQSAVEAAEAFFSCGDGQKSHPGCAVVEEALVRVDSSDGGDLTGGVRGPGGKWEPLDDVIMGGRSSSIWQAGVGRGALEARSEEGTFGRWAGTLVEEGGGFCGTVVKASTNMPFDASGFDGIRLRVRGDGNRYKFRLKPDTDLDKTPERQYQAVFDTVK-GQWTEVDLPFESFVAVKRNYVDYSAPRVNAGATGGKMLSLGIVFSRFAFNEYANPKCTRGAFQLDVRD-ISLYKKPRPRFVLVSSASAERYNRLSE--EERENDIPIVALNPGGILNWKYKAETHLRQSQLDYCIIRAAGLIPEGKEGDVPVRLQASQGDTISGRVSRDEVGQAAAAALGSPYATRKTLELRRDEAEDAVGKTP---DFTVLFRGLVEDADRSLVSATGAGLPLAPFPIAQDPPPPVSEDRKQEILNDSRV 1565 +AVLVLG TG+ G+ +V+ LL GR VV A R D+ ++F E G LF+Q GVDV D+++L LF GV+QVVS +G G +G + E V+ G+ + V A + Q P +E L + DL WE LDDVIMGG SSS G ALE +G+ W G LV EGGGFCG + + D S FDG+R+RV+GDG +KF +K D + TPE YQA FDT + G WT V LP+ SFV VKR D + G + LG+V SRF FN+ NP+ G F+L + +S Y+ PRP+ +++SSA ER + + E R+ DIPIV LNPGG+LNWK++AE R S Y ++R GL P L+A QGD+ISG+VSR EV AAAL SP A KT ELRR+EA DA GKT T LF L D+ R V L PFP A PP P +E+RK EIL D RV Sbjct: 27 NAVLVLGATGRAGRLIVQELLRSGRTVVAAVRTADKASEVFSALELQEGRQAEGKGDGILFVQAGVDVTDESTLTP-DLFAGVTQVVSALGGVTGRLPDGTFGYLDGMTPEAVEAKGMANVVAAMK--------QHLAPQIRTTQEVLPMRTAE---DLEA--------WERLDDVIMGGSSSS------GLTALE----DGSGAAWKGDLVVEGGGFCGARTR---KLGLDLSQFDGLRMRVKGDGQTFKFNIKT-ADQEDTPESTYQATFDTSEEGDWTTVHLPWHSFVPVKRAQSDPQGEPLR----GEAISKLGLVLSRFEFNKMPNPRYHPGPFELTIGGGLSAYRDPRPQLLVISSAGVERNAIIGDDAEARKKDIPIVQLNPGGVLNWKFEAECVARASGFPYSVVRCTGLDDGSAAAAEPRLLEADQGDSISGKVSRAEVALVVAAALASPDAANKTFELRRNEAVDAKGKTTGPRQLTRLFLKLALDSHRWRVG-------LQPFPRAVPPPAPPTEERKAEILADPRV 519
BLAST of mRNA_H-paniculata_contig1351.2173.1 vs. uniprot
Match: A0A2P6TPM0_CHLSO (Nadh:ubiquinone oxidoreductase complex i intermediate-associated 30 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TPM0_CHLSO) HSP 1 Score: 318 bits (814), Expect = 2.060e-92 Identity = 225/575 (39.13%), Postives = 301/575 (52.35%), Query Frame = 3 Query: 36 DAVLVLGGTGKTGQRVVKALLAQGRQVVLAARDKDRTQQLFDESTPG--------------------LFMQYGVDVRDKTSLNDAKLFEGVSQVVSTMGPRFGE--EGS-------SSEVVDFLGVQSAVEAAEAFFSCGDGQKSHPGCAVVEEALVRVDSSDGGDLTGGVRGPGGKWEPLDDVIMGGRSSSIWQAGVGRGALEARSEEGTFGRWAGTLVEEGGGFCGTVVKASTNMPFDASGFDGIRLRVRGDGNRYKFRLKPDTDLDKTPERQYQAVFDTVKGQWTEVDLPFESFVAVKRNYVDYSAPRVNAGATGGKMLSLGIVFSRFAFNEYANPKCTRGAFQLDVRD-ISLYKKPRPRFVLVSSASAERYNR--LSEEERENDIPIVALNPGGILNWKYKAETHLRQSQLDYCIIRAAGLIPEGKEGDVPVRLQASQGDTISGRVSRDEVGQAAAAALGSPYATRKTLELRRDEAEDAVGKTP---DFTVLFRGLVEDADRSLVSATGAGLPLAPFPIAQDPPPPVSEDRKQEILNDSRVKAQQQATEEGKAAMQETASSS*QRVRDAKQ 1655 DAVLV G TG+ G+ VV +LL QGR VV A R DR + + ++ P LF++ GVD+ + +L +LF+GV+QVV+ +G FG+ EG+ + E VD GV + AA VE+ L ++D + KW+ LDDVIMGG+SSS G+ A +E+G+ W G L+ EGGGFCG A+ +D S FDGI LR++GDG +K +K D + PE YQA F+T WT V +P+ FV VKR AP ++ ++ G+V SRF FN +ANP G F+L + I Y+ PRP+ ++VSSA ER + L EE R+ DIPIV LNPG +LN KY E +R + L YC++R GL E + G+ L+ASQGD I+GR+SR+E+ A AALG P A +KT+ELRR EA DA K D LF GLV+D R V L PFP PPV+++RK+EIL D RV QA G RVRD K+ Sbjct: 95 DAVLVFGATGRMGRTVVNSLLEQGRTVVAAVRSADRARDVLGKAGPTTGTVALGAGARKMDAAGGGILFIESGVDITNPETLTP-ELFKGVTQVVTAVGAVFGKTAEGTMGYLDDMTPERVDAGGVANVAAAAAKHLKRQQ--------RTVEDVLPMRTAAD-------IE----KWQRLDDVIMGGQSSS----GL------AAAEDGSGAVWTGDLIVEGGGFCGARTLAAE---YDLSAFDGISLRIKGDGQTFKLNIKTDAQFE-VPEDTYQATFETEPEGWTNVFIPWHEFVLVKRARSVPGAPALDPA----RIRQFGLVLSRFEFNGFANPAYRPGPFELRIEGGIRAYRDPRPQLIMVSSAGVERNAKIGLDEEARKKDIPIVQLNPGAVLNHKYSGENAVRAAGLPYCVLRPTGLTNESEPGEF--LLEASQGDRITGRISREELASLAVAALGLPSAAQKTMELRRQEATDAADKAMTDLDNLRLFLGLVQDKHRQRVG-------LEPFPAPXXXXPPVTDERKKEILADVRVIKSVQAGRGG-------------RVRDEKE 609
BLAST of mRNA_H-paniculata_contig1351.2173.1 vs. uniprot
Match: A0A2V0P7E0_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P7E0_9CHLO) HSP 1 Score: 312 bits (799), Expect = 8.010e-91 Identity = 218/538 (40.52%), Postives = 283/538 (52.60%), Query Frame = 3 Query: 36 DAVLVLGGTGKTGQRVVKALLAQGRQVVLAARDKDRTQQLFD---------ESTPG-LFMQYGVDVRDKTSLNDAKLFEGVSQVVSTMGPRFGE---------EGSSSEVVDFLGVQSAVEAAEAFFSCGDGQKSHPGCAVVEEALVRVDSSDGGDLTGGVRGPGGKWEPLDDVIMGGRSSSIWQAGVGRGALEARSEEGTFGRWAGTLVEEGGGFCGTVVKASTNMPFDASGFDGIRLRVRGDGNRYKFRLKPDTDLDKTPERQYQAVFDTVK-GQWTEVDLPFESFVAVKRNYVDYSAPRVNAGATGGKMLSLGIVFSRFAFNEYANPKCTRGAFQLDVRD-ISLYKKPRPRFVLVSSASAERYNRLSE--EERENDIPIVALNPGGILNWKYKAETHLRQSQLDYCIIRAAGLIPEGKEGDVPVRLQASQGDTISGRVSRDEVGQAAAAALGSPYATRKTLELRRDEAEDAVGK---TPDFTVLFRGLVEDADRSLVSATGAGLPLAPFPIAQDPPPPVSEDRKQEILNDSRVKA 1571 DAVLVLG TG+ G+ +V+ LL GR VV A R D+ ++F E + G LF+ GVDV + +L + +LF GV+QVVS +G G +G + E V+ G+ + V A F + E ++ + +++ DL WE LDDVIMGG SSS G+G A +G W G L+ EGGGFCG + + D SGFDG++LRV+ DG +K +K D + TPE YQA FDT + G W+ V LP+ +FV VKR D + TG + LG+V SRF FN+ NP G F L + + Y+ PRP+ VL+SSA ER + + E R+ IPIV LNPGG+LNWKY+AE R S YC++RA GL L+A QGDT+SGRVSR E +AAL +P A KT ELRR EA D G LF L DA+R V GLP PFP A PP P +E+RK EIL D RV A Sbjct: 117 DAVLVLGATGRAGRAIVQQLLRDGRTVVAAVRSADKATEVFSSLGVAEGRQEGSGGILFVDAGVDVTKEETLTE-ELFRGVTQVVSALGGVAGRLPDGGFGYLDGMTPEAVEAKGIANVVAAMARFMAPAKR---------ASEVVLSMRTAE--DLEA--------WERLDDVIMGGSSSS----GLGPAA------DGGGAEWKGDLIVEGGGFCGARTR---KLGLDLSGFDGLQLRVKSDGQTFKLNVKT-ADQEDTPESTYQATFDTAEDGDWSTVRLPWHTFVPVKRAQSDPQGEPL----TGDSISKLGLVLSRFEFNKMPNPAYHPGPFTLSIAGGVGAYRAPRPQLVLLSSAGVERNAVIGDDTEARKRSIPIVQLNPGGVLNWKYEAECAARASGFPYCVVRATGLDDGSPAASESRLLEADQGDTMSGRVSRAETALVISAALTNPEAAGKTFELRRSEAADGAGAGNGPRQLNRLFLKLAPDANRWRV-----GLP--PFPRAVPPPAPPTEERKAEILADPRVAA 609
BLAST of mRNA_H-paniculata_contig1351.2173.1 vs. uniprot
Match: I0YX59_COCSC (CIA30-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YX59_COCSC) HSP 1 Score: 306 bits (785), Expect = 1.130e-89 Identity = 216/558 (38.71%), Postives = 301/558 (53.94%), Query Frame = 3 Query: 36 DAVLVLGGTGKTGQRVVKALLAQGRQVVLAARDKDRTQQLFDE-----------STPGLFMQYGVDVRDKTSLNDAKLFEGVSQVVSTMGPRFGE---------EGSSSEVVDFLGVQSAVEAAEAFFSCGDGQKSHPGCAVVEEALVRVDSSDGGDLTGGVRGPGGKWEPLDDVIMGGRSSS-IWQAGVGRGALEARSEEGTFGRWAGTLVEEGGGFCGTVVKASTNMPFDASGFDGIRLRVRGDGNRYKFRLKPDTDLDKTPERQYQAVFDTVKGQWTEVDLPFESFVAVKRNYVDYSAPRVNAGATGGKMLSLGIVFSRFAFNEYANPKCTRGAFQLDVRD-ISLYKKPRPRFVLVSSASAERYNRLSEEE--RENDIPIVALNPGGILNWKYKAETHLRQSQLDYCIIRAAGLIPEGKEGDVPVRLQASQGDTISGRVSRDEVGQAAAAALGSPYATRKTLELRRDEAEDAVGKT---PDFTVLFRGLVEDADRSLVSATGAGLPLAPFPIAQDPPPPVSEDRKQEILNDSRVKAQQQATEEGKAAMQETASSS 1628 +AVLV G TGK G+++V LL +GR VV AARD + +F+E S L ++ VD+ + SLN +L+ GVSQV +GP FG + +SE VD GV + A ++ F D KS E A V +S+ DL KW+ LDDVIMGG+SSS + A G GA+ ++G L+ EGGGFCG KA + + FDG+ L V GDG +K LK D + PE +QA FDT+ G+ T V +P+ FVAVKR VD +AP+++ + + LG+V SRF FN ANP G F L ++ I +++PRP V V+SA ER ++ ++E R+ DIPIV LNPGG+LN KY E +R + + Y ++R+ GL E ++ D L+ASQGD ISG++SR EV + A AALG+ + KT+E+RR EA GK PD LF V+D R ++ LAP P + +R EIL+D RV+A Q A G+ +E S++ Sbjct: 7 NAVLVFGSTGKLGRQIVTQLLEEGRTVVAAARDAQKADTVFEELGLRVGYQADKSKGILALEGDVDITNPESLNRPELWAGVSQVACAVGPIFGRLPDGKMGYLDDMTSERVDAQGVANIASALQSVFK--DKAKSR------ETATVLPMTSEA-DLV--------KWQRLDDVIMGGQSSSALTLAADGSGAV-----------FSGDLIIEGGGFCGARTKA---LDLNLGEFDGVALEVEGDGQTFKLNLKT-ADQEDLPECTFQATFDTLPGRSTTVYIPWREFVAVKRARVDPAAPKLDPSS----VRQLGLVLSRFEFNGLANPNYWAGKFSLKIKGGIQGFREPRPAIVFVTSAGVERNAKIGDDETARKADIPIVQLNPGGVLNHKYAGEWAVRSAGIPYAVVRSTGLTSEDEDTDFV--LEASQGDRISGKISRKEVARVAVAALGTAASVGKTVEIRRSEAAGDRGKASSQPDLERLFLTAVQDRHRPRIN-------LAPLPAXXXXXXXXTPERTAEILSDERVQAAQAAGRGGRVRSEEETSAA 519
BLAST of mRNA_H-paniculata_contig1351.2173.1 vs. uniprot
Match: A0A8J9SFD6_9CHLO (Probable protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SFD6_9CHLO) HSP 1 Score: 308 bits (788), Expect = 1.010e-88 Identity = 222/586 (37.88%), Postives = 302/586 (51.54%), Query Frame = 3 Query: 36 DAVLVLGGTGKTGQRVVKALLAQGRQVVLAARDKDRTQQLF-----------DESTPGLFMQYGVDVRDKTSLNDAKLFEGVSQVVSTMGPRFGE---------EGSSSEVVDFLGVQSAVEAAEAFFSCGDGQKSHPGCAVVEEALVRVDSSDGGDLTGGVRGPGGKWEPLDDVIMGGRSSSIWQAGVGRGALEARSEEGTFGRWAGTLVEEGGGFCGTVVKASTNMPFDASGFDGIRLRVRGDGNRYKFRLKPDTDLDKTPERQYQAVFDTVKGQWTEVDLPFESFVAVKRNYVDYSAPRVNAGATGGKMLSLGIVFSRFAFNEYANPKCTRGAFQLDVRD-ISLYKKPRPRFVLVSSASAERYNRLSEEE--RENDIPIVALNPGGILNWKYKAETHLRQSQLDYCIIRAAGLIPEGKEGDVPVRLQASQGDTISGRVSRDEVGQAAAAALGSPYATRKTLELRRDEAEDAVGKTP---DFTVLFRGLVEDADRSLVSATGAGLPLAPFPIAQDPPPPVSE----------------DRKQEILNDSRVKAQQQATEEGKAAMQE--TASSS*QRVRDAKQFV 1661 DAVLV G TGK G+++V L+A GR VV AARD D+ +F D L ++ GVD+ + SLN +L++GVSQV +GP FG + +SE VD GV + +A ++ F A + V + + DL WE LDDVIMGG+SSS +A + +G+ ++G L+ EGGGFCG KA + + +DGI L + GDG YK LK D + PE +QA FDTV G+ T V +P+ FVAVKR VD ++P+++ + + LG+V SRF FN ANP RG F L + I +K+P+P V V+SA ER ++ ++E R+ DIPIV LNPGG+LN KY E LR + + Y I+R+ GL E + D L+ASQGD ISG++SR EV A AALG+ + KT+E+RR EA GK P D LF VED R ++ L P P PP P +R EIL+D RV+A Q A G+ +E A+SS V D + V Sbjct: 116 DAVLVFGSTGKLGRQIVAQLIAAGRTVVAAARDADKGDSVFQELGLQRGYQADRDQGVLAIEGGVDITNPESLNRPELWQGVSQVACAVGPVFGRLPDGKMGYLDDMTSERVDAQGVANIAKALQSVFKDK---------ARARDTAVVLPMASAADLA--------VWERLDDVIMGGQSSSTLRA----------AGDGSGADFSGDLIIEGGGFCGARTKA---LDLNLGDYDGIALDLEGDGQTYKLNLKT-ADQEDVPECTFQATFDTVAGRTTTVYIPWREFVAVKRARVDPASPKLDPSS----VRQLGLVLSRFEFNGLANPNYRRGKFSLKIMSGIQGFKEPKPAVVFVTSAGVERNAKIGDDEVARKADIPIVQLNPGGVLNHKYAGEWALRSAGVPYAIVRSTGLTSEDENQDF--LLEASQGDRISGKISRKEVAAVAVAALGTGASVGKTVEVRRSEAAGDKGKKPGQADLERLFLTAVEDRHRPRIN-------LGPLPAPVPPPNPPHRRQCCRPRRPINSFEDPERTAEILSDERVQAAQAAGRGGRVRSEEESAAASSVTVVGDGRSEV 657 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1351.2173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1351.2173.1 >prot_H-paniculata_contig1351.2173.1 ID=prot_H-paniculata_contig1351.2173.1|Name=mRNA_H-paniculata_contig1351.2173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=483bp MQYGVDVRDKTSLNDAKLFEGVSQVVSTMGPRFGEEGSSSEVVDFLGVQSback to top mRNA from alignment at H-paniculata_contig1351:4403..19925+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1351.2173.1 ID=mRNA_H-paniculata_contig1351.2173.1|Name=mRNA_H-paniculata_contig1351.2173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15523bp|location=Sequence derived from alignment at H-paniculata_contig1351:4403..19925+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1351:4403..19925+ >mRNA_H-paniculata_contig1351.2173.1 ID=mRNA_H-paniculata_contig1351.2173.1|Name=mRNA_H-paniculata_contig1351.2173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2898bp|location=Sequence derived from alignment at H-paniculata_contig1351:4403..19925+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |