mRNA_H-paniculata_contig13507.2172.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13507.2172.1 vs. uniprot
Match: D7G182_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G182_ECTSI) HSP 1 Score: 339 bits (869), Expect = 2.550e-114 Identity = 169/207 (81.64%), Postives = 186/207 (89.86%), Query Frame = 1 Query: 1 ESLSAQRLWRETAGKRPRQPSDEREYFEEQWKQNFSDSEVDYSKPLRMADEEMAKKRHRK----NAKVIYRRASPFGSAVSKSFKCDNCGQISSIMVHIPKFQIVQAGSDVHAEFLIVVGLGTVTLGVWRRFTEFKRLANKLSRSAHRDQFHNALCSWRCLRERQRWFRCLDRDYLILKTFLLERFLHDLVFESMSPNTVRDFLGVL 609 ESLS QRLWRETAGKRPRQPS+ER++FEEQW +NFSDSEVDYS+PL D A+KR +K ++KV YR SPFGSAVSKSF+CDNCGQI+SIMVHIPKFQI+Q GSDVHAE+LIVVGLGTVTLGVWRRF+EF+RLA+KLSRS RDQFHNALCSWRCLRERQRWFRCLD DYLILKTFLLERFLHD VFESMSPNTVR+FLGVL Sbjct: 160 ESLSTQRLWRETAGKRPRQPSEERQFFEEQWAKNFSDSEVDYSEPLAETDAAAARKRAKKRTAPHSKVHYRATSPFGSAVSKSFQCDNCGQITSIMVHIPKFQIIQTGSDVHAEYLIVVGLGTVTLGVWRRFSEFQRLASKLSRSRRRDQFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREFLGVL 366
BLAST of mRNA_H-paniculata_contig13507.2172.1 vs. uniprot
Match: A0A835ZDH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH9_9STRA) HSP 1 Score: 310 bits (793), Expect = 2.240e-102 Identity = 155/203 (76.35%), Postives = 174/203 (85.71%), Query Frame = 1 Query: 1 ESLSAQRLWRETAGKRPRQPSDEREYFEEQWKQNFSDSEVDYSKPLRMADEEMAKKRHRKNAKVIYRRASPFGSAVSKSFKCDNCGQISSIMVHIPKFQIVQAGSDVHAEFLIVVGLGTVTLGVWRRFTEFKRLANKLSRSAHRDQFHNALCSWRCLRERQRWFRCLDRDYLILKTFLLERFLHDLVFESMSPNTVRDFLGVL 609 ESLSAQRLW +TAG+RPRQPS ER YFE+ W++NF +SEVDY+KPL +D ++K R +V+YR SPFGSAVSKSFKC+NCG+ISSIMVHIPKFQIVQ+GSDVHAE+LIVVGLG VTLGVWRRF EFK LANKL S R QFHNALCSW CLR RQR FRCLD+DYLILK FLLERFLHDLVFESMSP+TVR+FLGVL Sbjct: 195 ESLSAQRLWHQTAGRRPRQPSQERTYFEQVWEKNFGESEVDYTKPL-PSDRRSSRKGARPPTRVLYRATSPFGSAVSKSFKCENCGEISSIMVHIPKFQIVQSGSDVHAEYLIVVGLGAVTLGVWRRFREFKNLANKLEGSNKRQQFHNALCSWHCLRARQRLFRCLDKDYLILKCFLLERFLHDLVFESMSPDTVREFLGVL 396
BLAST of mRNA_H-paniculata_contig13507.2172.1 vs. uniprot
Match: A0A835YMJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMJ5_9STRA) HSP 1 Score: 275 bits (702), Expect = 7.740e-88 Identity = 151/261 (57.85%), Postives = 172/261 (65.90%), Query Frame = 1 Query: 1 ESLSAQRLWRETAGKRPRQPSDEREYFEEQWKQNFSDSEVDYSKPLRMADEEMAKKRH-RKNAKVIYRRASPFGSAVSKSFKCDNCGQISSIMVHIPKFQIVQAGSDVHAEFLIVVGLGTVTLGVWRRFTEFKR---------------------------------------------------------LANKLSRSAHRDQFHNALCSWRCLRERQRWFRCLDRDYLILKTFLLERFLHDLVFESMSPNTVRDFLGVL 609 ESLS Q+LW +TAG+RPRQPS ERE+F +W++NF +S VDY+KPL + + + R +VIYR SPFGSAVSKSFKC+NCG+ISSIMVHIPKFQIVQAGSDVHAE+LIVVGLGTVTLGVWRRF EFK LA KL+ S+ R QFHNALCSW CLR RQR FRCLD+DYLILK FLLERFLHDLVFESMSP+TVR+FLGVL Sbjct: 197 ESLSTQKLWHQTAGRRPRQPSSEREFFAMEWEKNFENSAVDYTKPLAADGSGLTDRANGRTQTRVIYRATSPFGSAVSKSFKCENCGEISSIMVHIPKFQIVQAGSDVHAEYLIVVGLGTVTLGVWRRFREFKMFATKLALHFGLAIGCSTCGAASSTSSLHNFICSKLSAADLYLRARAGVWRRFREFKTLATKLASSSKRRQFHNALCSWHCLRARQRLFRCLDKDYLILKCFLLERFLHDLVFESMSPDTVREFLGVL 457
BLAST of mRNA_H-paniculata_contig13507.2172.1 vs. uniprot
Match: A0A7S2G750_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G750_9STRA) HSP 1 Score: 216 bits (550), Expect = 3.120e-67 Identity = 113/212 (53.30%), Postives = 150/212 (70.75%), Query Frame = 1 Query: 1 ESLSAQRLWRETAGKRPRQPSDEREYFEEQWKQNFSDSEVDYSKPLRMADEEMAKKRH------RKNAKVIYRRASPFGSAVSKSFKCDNCGQISSIMVHIPKFQIVQAGSDVHAEFLIVVGLGTVTLGVWRRFTEFKRLANKLSRSAHRD----QFHNALCSWRCLRERQRWFRCLDRDYLILKTFLLERFLHDLVFESMSPNTVRDFLGV 606 ESLS Q LW TAG+RP+QP DERE E+ + QNF+ SE+ + ++D+E K+ +VI+R SPFG V+KSF+C +C +S++MVHIPKFQIV+ DVHAE+L+VVGLG VT GVWRRF++F+RLA K+ S ++D Q+ + SW+CLR R+R FRCLD+DYL LK FLLERFLHDL+FE SP+ + D+LGV Sbjct: 58 ESLSTQALWHSTAGRRPQQPEDEREAIEKMYAQNFAKSEMTLEE---VSDDENPNKKQCCRPTVEDPVRVIHRGKSPFGHQVTKSFQCPHCTNMSAMMVHIPKFQIVERNGDVHAEYLVVVGLGHVTFGVWRRFSQFQRLAEKIMSSGNKDDEEDQYRMSKFSWQCLRRRKRLFRCLDKDYLALKCFLLERFLHDLLFECDSPSVITDYLGV 266
BLAST of mRNA_H-paniculata_contig13507.2172.1 vs. uniprot
Match: F0XVE8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVE8_AURAN) HSP 1 Score: 207 bits (527), Expect = 3.670e-62 Identity = 107/213 (50.23%), Postives = 140/213 (65.73%), Query Frame = 1 Query: 1 ESLSAQRLWRETAGKRPRQPSDEREYFEEQWKQNFSDSEVDYSKPLRMADEEMAKKRHRK-----------NAKVIYRRASPFGSAVSKSFKCDNCGQISSIMVHIPKFQIVQAGSDVHAEFLIVVGLGTVTLGVWRRFTEFKRLANKLSRSAHRDQFHNALCSWRCLRERQRWFRCLDRDYLILKTFLLERFLHDLVFESMSPNTVRDFLGV 606 +SL+ Q LW TAG RP QP+ ER FEE W QN ++S+ + A + KR R A+++ R +SPFG++V+KS++CD CG+++SIM+ IPK+QIV+ G HAE+L+V LG VT G+WRRF F L +K+S++ +D + N L SWRCLR RQRWFRCLDRDYL LK FLLERFLHD VFES S DFL + Sbjct: 192 DSLANQALWHSTAGCRPAQPAHERRQFEELWAQNLANSQASGGE----ARSDSNSKRRRALVCDRAPVEVGGAQLLLRESSPFGTSVTKSWRCDCCGELTSIMIRIPKYQIVRKGGKSHAEYLVVARLGAVTFGLWRRFAHFTALHDKISKTLDKDDYQNTLWSWRCLRRRQRWFRCLDRDYLALKCFLLERFLHDAVFESASSTLFADFLEI 400
BLAST of mRNA_H-paniculata_contig13507.2172.1 vs. uniprot
Match: A0A8J2SNU0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNU0_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.630e-58 Identity = 100/202 (49.50%), Postives = 140/202 (69.31%), Query Frame = 1 Query: 1 ESLSAQRLWRETAGKRPRQPSDEREYFEEQWKQNFSDSEV--DYSKPLRMADEEMAKKRHRKNAKVIYRRASPFGSAVSKSFKCDNCGQISSIMVHIPKFQIVQAGSD-VHAEFLIVVGLGTVTLGVWRRFTEFKRLANKLSRSAHRDQFHNALCSWRCLRERQRWFRCLDRDYLILKTFLLERFLHDLVFESMSPNTVRDF 597 ++L Q LW TAG RP QP+ ER+ EE W + ++S+ D+ + ++ E K+ K++ R ASPFG++V+KS++C+ CG+++SIMV IPK+QIVQ G + HAEFL+V LG VT G+WRR++ F+ L K++R+ R+ + N SWRCLR RQRWFRCLDRDYL LK FLLERFLHDLVFE+ + + +F Sbjct: 181 DTLEMQALWHATAGTRPAQPAHERKRMEEIWSKQIAESQACKDFKESPQILSNE-------KDVKILARDASPFGTSVTKSWRCECCGELTSIMVRIPKYQIVQRGKERPHAEFLVVARLGAVTFGLWRRYSHFEALNEKVTRNFRREDYSNTHWSWRCLRRRQRWFRCLDRDYLALKCFLLERFLHDLVFEAHNSSVFAEF 375
BLAST of mRNA_H-paniculata_contig13507.2172.1 vs. uniprot
Match: A0A482SXC2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXC2_9ARCH) HSP 1 Score: 169 bits (428), Expect = 1.890e-48 Identity = 95/218 (43.58%), Postives = 140/218 (64.22%), Query Frame = 1 Query: 4 SLSAQRLWRETAGKRPRQPSDEREYFEEQWKQNFSDSEVDYSKPLRMADEEMAKKRHR---------KNAKVIYRRASPFGSAVSKSFKCDNCGQISSIMVHIPKFQIVQAG-SDVHAEFLIVVGLG---TVTLGVWRRFTEFKRLANKLS----RSAHRDQFHNALCSWRCLRERQRWFRCLDRDYLILKTFLLERFLHDLVFESMSPNTVRDFLGV 606 SL Q+LW TAG+RP+QP EREYFE+ W +NF S V Y+ E A K+ R ++++R SPF ++VSKSF D +++S+ + +P ++IV++ D+HAE+++VV LG VT G+W+R ++F RLA +L RS + F N+L SW+C+ +R+RWF+ LDRDYL LK FLLERF+HDL+FE+ +P + FLG+ Sbjct: 94 SLETQQLWYTTAGRRPKQPEQEREYFEKLWAENFEQSSVSYNNN---PSETPAGKKSRIVDNIPYSELQGEIVFRGKSPFSNSVSKSFVGD---RVASMTLQMPYYRIVRSLLGDLHAEYMVVVTLGGNVPVTFGIWKRHSDFSRLAKELMERNMRSYEENAFKNSLLSWQCVLQRKRWFKSLDRDYLALKCFLLERFMHDLLFEAQAPKVLNRFLGL 305
BLAST of mRNA_H-paniculata_contig13507.2172.1 vs. uniprot
Match: A0A835YTT0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT0_9STRA) HSP 1 Score: 166 bits (421), Expect = 8.960e-48 Identity = 91/208 (43.75%), Postives = 125/208 (60.10%), Query Frame = 1 Query: 1 ESLSAQRLWRETAGKRPRQPSDEREYFEEQWKQNFSDSEVDYSKPLRMADEEMAKKRHRKNAKVIYRRASP-FGSAVSKSFKCDNCGQISSIMVHIPKFQIVQAGSDV----------HAEFLIVVGLGTVTLGVWRRFTEFKRLANKLSRSAHRDQFHNALCSWRCLRERQRWFRCLDRDYLILKTFLLERFLHDLVFESMSPNTVR 591 E+L Q LW TAG+RPRQP ER +FE W+ NF+ SEV Y +P A A +R V+ + SP G++VSKSF C CG + + +H+ F++VQ G HAE+LI+V +G T G W+RFT+F RLA ++R R F +L SW + RQRW RCL+ +YL +K LL+RFLHDLVF+S +P+ +R Sbjct: 73 EALPNQALWHLTAGRRPRQPPSERAHFERLWESNFAQSEVRYREPAAAAAPRCAARR------VLLKGPSPCLGASVSKSFLCPGCGGTAQLRLHVDGFRVVQGGGXXXDGGARCRRPHAEYLILVEVGEFTFGAWKRFTDFARLAAAIARPELRGHFRRSLVSWGAVLARQRWARCLEHEYLSVKCLLLQRFLHDLVFDSTAPSPLR 274
BLAST of mRNA_H-paniculata_contig13507.2172.1 vs. uniprot
Match: F0XW23_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW23_AURAN) HSP 1 Score: 163 bits (412), Expect = 2.680e-45 Identity = 98/213 (46.01%), Postives = 124/213 (58.22%), Query Frame = 1 Query: 4 SLSAQRLWRETAGKRPRQPSDEREYFEEQWKQNFSDSEVDYSK---------PLRMADEEMAKKRHRKNAKVIYRRASPFGSAVSKSFKCDNCGQISSIMVHIPKFQIVQ--AGSDVHAEFLIVVGLGTVTLGVWRRFTEFKRLANKLSRSAHRD-QFHNALCSWRCLRERQRWFRCLDRDYLILKTFLLERFLHDLVFESMSPNTVRDFLGV 606 +L Q LW TAG+RP QP ER E + NF S V Y P R A I R SPFG++V+KSF+CD CG+ +S+M+ IPKFQIV+ +G D+ AE+L+V LG VT G+WRR + F L +++ D + N L SWRCL+ RQR FRCLD+DYL +K FLLERFLHD VFES S FLG+ Sbjct: 176 TLDDQVLWHATAGQRPPQPLAERRAAEAAMRANFEKSCVAYDDGACPPCGPPPGRAAV-------------PILREPSPFGTSVTKSFQCDCCGERTSLMIRIPKFQIVRERSGVDLRAEYLVVARLGGVTFGIWRRHSHFLDLQQAIAKEPDADVTYRNTLWSWRCLKRRQRLFRCLDKDYLAVKCFLLERFLHDAVFESSSSAIFSTFLGL 375
BLAST of mRNA_H-paniculata_contig13507.2172.1 vs. uniprot
Match: A0A6U1B056_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B056_9STRA) HSP 1 Score: 147 bits (372), Expect = 3.820e-40 Identity = 68/131 (51.91%), Postives = 94/131 (71.76%), Query Frame = 1 Query: 214 FGSAVSKSFKCDNCGQISSIMVHIPKFQIVQAGSDVHAEFLIVVGLGTVTLGVWRRFTEFKRLANKLSRSAHRDQFHNALCSWRCLRERQRWFRCLDRDYLILKTFLLERFLHDLVFESMSPNTVRDFLGV 606 FG +VSK+F C+ CG +S+ + IPKFQ+V++G++ AEFL+V+ LG T GVWRR++EF LAN ++R R+ F N+ SW+C+ R+RWFRCLD DYL +K FLLERFLHD + ES V F+G+ Sbjct: 170 FGCSVSKTFVCEECGNVSNTAIRIPKFQVVKSGNEQFAEFLVVIELGIFTFGVWRRYSEFVELANTITR--RRELFPNSHFSWQCMCYRKRWFRCLDPDYLTIKCFLLERFLHDCICESSDQTHVLKFIGM 298 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13507.2172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13507.2172.1 >prot_H-paniculata_contig13507.2172.1 ID=prot_H-paniculata_contig13507.2172.1|Name=mRNA_H-paniculata_contig13507.2172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp ESLSAQRLWRETAGKRPRQPSDEREYFEEQWKQNFSDSEVDYSKPLRMADback to top mRNA from alignment at H-paniculata_contig13507:2715..6904- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13507.2172.1 ID=mRNA_H-paniculata_contig13507.2172.1|Name=mRNA_H-paniculata_contig13507.2172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4190bp|location=Sequence derived from alignment at H-paniculata_contig13507:2715..6904- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13507:2715..6904- >mRNA_H-paniculata_contig13507.2172.1 ID=mRNA_H-paniculata_contig13507.2172.1|Name=mRNA_H-paniculata_contig13507.2172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at H-paniculata_contig13507:2715..6904- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |