mRNA_H-paniculata_contig1340.2126.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1340.2126.1
Unique NamemRNA_H-paniculata_contig1340.2126.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1340.2126.1 vs. uniprot
Match: D7FXD6_ECTSI (Serine/threonine-protein phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD6_ECTSI)

HSP 1 Score: 527 bits (1357), Expect = 1.630e-188
Identity = 244/261 (93.49%), Postives = 258/261 (98.85%), Query Frame = 1
Query:    4 VKEILVEENNVQLVRSPVTVCGDLHGQFFDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARWPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKFCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERNREIPHEGAFCDMMWSDPEDIRDAWLISPRGAGYLFGARVAEEFNHLNGLDLICRAHQLVMEGHKYHFASKSVATVWSAPNYCYRCGNVAAVLSLDNKLGREFKIFHEVK 786
            VKEIL+EENNVQLVRSPVT+CGD+HGQF+DLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKAR+PDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWK+CVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERN+EIPHEGAFCDMMWSDPE+IRDAWLISPRGAGYLFG+RVAEEFNH+NGLDLICRAHQLVMEG KYHFASKSVATVWSAPNYCYRCGNVAA+L+LD  LGR+FKIFHEV+
Sbjct:   27 VKEILIEENNVQLVRSPVTICGDIHGQFYDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERNKEIPHEGAFCDMMWSDPEEIRDAWLISPRGAGYLFGSRVAEEFNHMNGLDLICRAHQLVMEGFKYHFASKSVATVWSAPNYCYRCGNVAAMLALDENLGRDFKIFHEVE 287          
BLAST of mRNA_H-paniculata_contig1340.2126.1 vs. uniprot
Match: A0A835ZDV3_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDV3_9STRA)

HSP 1 Score: 461 bits (1186), Expect = 2.050e-162
Identity = 208/260 (80.00%), Postives = 234/260 (90.00%), Query Frame = 1
Query:    4 VKEILVEENNVQLVRSPVTVCGDLHGQFFDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARWPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKFCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERNREIPHEGAFCDMMWSDPEDIRDAWLISPRGAGYLFGARVAEEFNHLNGLDLICRAHQLVMEGHKYHFASKSVATVWSAPNYCYRCGNVAAVLSLDNKLGREFKIFHEV 783
            V  +L+EEN V  V SPVTVCGD+HGQF+DLLELL  GG++P TSYIFMGDFVDRGHNSVETF+LLM LKARWPD +TLLRGNHESRQITQVYGFYEECMRKYGNANPW++C  VFDHL+LAAL+D   LCVHGGLSPEIR +DQIRTI+R REIPHEGAFCD+MWSDPEDIRDAW ISPRGAGYLFGA+VA+EF H+NGL+LICRAHQLVMEG+KYHF   ++ATVWSAPNYCYRCGN+AA+L+LD  L REFKIF+EV
Sbjct:   30 VVSLLIEENTVHPVASPVTVCGDIHGQFYDLLELLRTGGELPGTSYIFMGDFVDRGHNSVETFELLMCLKARWPDRVTLLRGNHESRQITQVYGFYEECMRKYGNANPWRYCTNVFDHLSLAALIDGRALCVHGGLSPEIRCLDQIRTIDRVREIPHEGAFCDLMWSDPEDIRDAWAISPRGAGYLFGAKVADEFRHVNGLELICRAHQLVMEGYKYHFPGNALATVWSAPNYCYRCGNIAAILALDGNLNREFKIFNEV 289          
BLAST of mRNA_H-paniculata_contig1340.2126.1 vs. uniprot
Match: W7TS65_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS65_9STRA)

HSP 1 Score: 456 bits (1172), Expect = 2.410e-160
Identity = 210/260 (80.77%), Postives = 233/260 (89.62%), Query Frame = 1
Query:    4 VKEILVEENNVQLVRSPVTVCGDLHGQFFDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARWPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKFCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERNREIPHEGAFCDMMWSDPEDIRDAWLISPRGAGYLFGARVAEEFNHLNGLDLICRAHQLVMEGHKYHFASKSVATVWSAPNYCYRCGNVAAVLSLDNKLGREFKIFHEV 783
            VKEIL+EE NVQ VRSPVTVCGD+HGQFFDLL+L A GG+VP TSYIFMGDFVDRGHNSVET  LL+ LKAR+P  MTLLRGNHESRQITQVYGFYEECMRKYGNAN WK+CV+VFD+LNLAAL+D +VLCVHGGLSPEIRT+DQIRTI+R +EIPHEG FCDMMWSDPEDI D W+ISPRGAGYLFG++V  EFN +NGL+LICRAHQLVMEG KYHFA +S+ TVWSAPNYCYRCGNVAAVL+ D  L REFK+F EV
Sbjct:   27 VKEILIEECNVQPVRSPVTVCGDIHGQFFDLLKLFACGGEVPQTSYIFMGDFVDRGHNSVETLTLLLCLKARYPQNMTLLRGNHESRQITQVYGFYEECMRKYGNANAWKYCVDVFDYLNLAALIDGQVLCVHGGLSPEIRTVDQIRTIDRVQEIPHEGPFCDMMWSDPEDITDPWVISPRGAGYLFGSKVTREFNQVNGLELICRAHQLVMEGFKYHFAERSLVTVWSAPNYCYRCGNVAAVLAFDENLNREFKMFKEV 286          
BLAST of mRNA_H-paniculata_contig1340.2126.1 vs. uniprot
Match: K3X097_GLOUD (Serine/threonine-protein phosphatase n=4 Tax=Pythiaceae TaxID=4782 RepID=K3X097_GLOUD)

HSP 1 Score: 441 bits (1134), Expect = 2.800e-154
Identity = 200/260 (76.92%), Postives = 231/260 (88.85%), Query Frame = 1
Query:    4 VKEILVEENNVQLVRSPVTVCGDLHGQFFDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARWPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKFCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERNREIPHEGAFCDMMWSDPEDIRDAWLISPRGAGYLFGARVAEEFNHLNGLDLICRAHQLVMEGHKYHFASKSVATVWSAPNYCYRCGNVAAVLSLDNKLGREFKIFHEV 783
            VK++L+EE+NV  V SPVTVCGD+HGQFFDLLEL   GG+VP+T+YIFMGDFVDRGHNSVETF+LL+ LKA++PD +TLLRGNHE RQITQVYGFYEEC+RKYGNANPWK+C +VFD+LNLAA++D  VLCVHGGLSPEIRT+DQIRTIER +EIPHEG+FCD+MWSDPEDI + W +SPRGAGYLFGA+V  EFN +NGLDLICRAHQLV EG+KY F  KS+ TVWSAPNYCYRCGNVAA+LS D  L REFK+F EV
Sbjct:   46 VKQLLIEESNVVAVSSPVTVCGDIHGQFFDLLELFRCGGEVPNTNYIFMGDFVDRGHNSVETFELLLCLKAQYPDRITLLRGNHECRQITQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGRVLCVHGGLSPEIRTLDQIRTIERQQEIPHEGSFCDLMWSDPEDI-ETWAMSPRGAGYLFGAKVTAEFNQINGLDLICRAHQLVQEGYKYMFPEKSLVTVWSAPNYCYRCGNVAAILSFDENLEREFKLFREV 304          
BLAST of mRNA_H-paniculata_contig1340.2126.1 vs. uniprot
Match: A0A024UH92_9STRA (Serine/threonine-protein phosphatase n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UH92_9STRA)

HSP 1 Score: 437 bits (1123), Expect = 7.220e-153
Identity = 197/260 (75.77%), Postives = 233/260 (89.62%), Query Frame = 1
Query:    4 VKEILVEENNVQLVRSPVTVCGDLHGQFFDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARWPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKFCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERNREIPHEGAFCDMMWSDPEDIRDAWLISPRGAGYLFGARVAEEFNHLNGLDLICRAHQLVMEGHKYHFASKSVATVWSAPNYCYRCGNVAAVLSLDNKLGREFKIFHEV 783
            VKEILVEE+NVQLV SPVTVCGD+HGQF+DLLEL  +GG++P T+Y+FMGDFVDRGHNSVETF++L+ LKAR+PD +TLLRGNHESRQ+TQVYGFYEEC+RKYGNANPWK+C +VFD+LNLAA++D +VLCVHGGLSPEIRT+DQ+RTIER +EIPHEGAF D+MWSDPEDI +AW +SPRGAG+LFG +V +EFN LNGLDLICRAHQLV EG+ Y F  K++ TVWSAPNYCYR GNVAA+L+ D  L REFK+F EV
Sbjct:   29 VKEILVEESNVQLVSSPVTVCGDIHGQFYDLLELFRVGGELPTTNYVFMGDFVDRGHNSVETFEMLLCLKARYPDRITLLRGNHESRQVTQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGKVLCVHGGLSPEIRTLDQVRTIERQQEIPHEGAFSDLMWSDPEDI-EAWAMSPRGAGFLFGWKVTQEFNRLNGLDLICRAHQLVQEGYSYMFPDKNLVTVWSAPNYCYRVGNVAAILAFDENLNREFKLFREV 287          
BLAST of mRNA_H-paniculata_contig1340.2126.1 vs. uniprot
Match: A0A1V9ZA30_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZA30_9STRA)

HSP 1 Score: 434 bits (1116), Expect = 8.400e-152
Identity = 194/260 (74.62%), Postives = 230/260 (88.46%), Query Frame = 1
Query:    4 VKEILVEENNVQLVRSPVTVCGDLHGQFFDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARWPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKFCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERNREIPHEGAFCDMMWSDPEDIRDAWLISPRGAGYLFGARVAEEFNHLNGLDLICRAHQLVMEGHKYHFASKSVATVWSAPNYCYRCGNVAAVLSLDNKLGREFKIFHEV 783
            VKEILVEE+NVQ V SPVTVCGD+HGQF+DLLEL  +GG++P T+Y+FMGDFVDRG+NSVETF+LL+ LKAR+PD +TLLRGNHESRQ+TQVYGFYEEC+RKYGNANPWK+C +VFD+LNLAA++D  +LCVHGGLSPEI T+DQ+RTIER +E+PHEGAFCD+MWSDPEDI + W +SPRGAG+LFG++V  EFNHLNGLDLICRAHQL  EG+ Y F  KS+ TVWSAPNYCYR GN+AA+L+ D  L REFKIF EV
Sbjct:   29 VKEILVEESNVQAVSSPVTVCGDIHGQFYDLLELFRVGGELPTTNYVFMGDFVDRGNNSVETFELLLCLKARYPDRITLLRGNHESRQVTQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGRILCVHGGLSPEIHTLDQVRTIERQQEVPHEGAFCDLMWSDPEDI-ETWAMSPRGAGFLFGSKVTAEFNHLNGLDLICRAHQLAQEGYTYMFPEKSLVTVWSAPNYCYRVGNLAAILAFDEHLNREFKIFREV 287          
BLAST of mRNA_H-paniculata_contig1340.2126.1 vs. uniprot
Match: M4BZB8_HYAAE (Serine/threonine-protein phosphatase n=24 Tax=Peronosporaceae TaxID=4777 RepID=M4BZB8_HYAAE)

HSP 1 Score: 431 bits (1107), Expect = 3.480e-150
Identity = 197/260 (75.77%), Postives = 227/260 (87.31%), Query Frame = 1
Query:    4 VKEILVEENNVQLVRSPVTVCGDLHGQFFDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARWPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKFCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERNREIPHEGAFCDMMWSDPEDIRDAWLISPRGAGYLFGARVAEEFNHLNGLDLICRAHQLVMEGHKYHFASKSVATVWSAPNYCYRCGNVAAVLSLDNKLGREFKIFHEV 783
            VK +L+EE+NVQ V SPVTVCGD+HGQFFDLLEL   GG + DT+YIFMGDFVDRGHNSVETF+LL+ LK R+PD +TLLRGNHE RQITQVYGFYEEC+RKYGNANPWK+C +VFD+LNLAA++D  VLCVHGGLSPE+RT+DQIRTIER +EIPHEG+FCD+MWSDPEDI + W +SPRGAGYLFGA+V +EFN +NGLDLICRAHQLV EG KY F   S+ TVWSAPNYCYRCGNVAA+LS D  L R+FK+F EV
Sbjct:   46 VKLLLIEESNVQPVSSPVTVCGDIHGQFFDLLELFRCGGDIRDTNYIFMGDFVDRGHNSVETFELLLCLKVRYPDRITLLRGNHECRQITQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAIIDGRVLCVHGGLSPELRTLDQIRTIERQQEIPHEGSFCDLMWSDPEDI-ETWAMSPRGAGYLFGAKVTQEFNQINGLDLICRAHQLVQEGFKYMF-DNSLVTVWSAPNYCYRCGNVAAILSFDENLERDFKLFREV 303          
BLAST of mRNA_H-paniculata_contig1340.2126.1 vs. uniprot
Match: F0WDQ3_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Albugo TaxID=65356 RepID=F0WDQ3_9STRA)

HSP 1 Score: 433 bits (1113), Expect = 4.440e-150
Identity = 194/260 (74.62%), Postives = 228/260 (87.69%), Query Frame = 1
Query:    4 VKEILVEENNVQLVRSPVTVCGDLHGQFFDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARWPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKFCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERNREIPHEGAFCDMMWSDPEDIRDAWLISPRGAGYLFGARVAEEFNHLNGLDLICRAHQLVMEGHKYHFASKSVATVWSAPNYCYRCGNVAAVLSLDNKLGREFKIFHEV 783
            VK+ L+EE+NVQ V SPVTVCGD+HGQFFDLLEL   GG +  T+YIFMGDFVDRGHNSVETF+LL+ LKAR+PD +TLLRGNHE RQITQVYGFYEEC+RKYGNANPWK+C +VFD+LNLAA++D  +LCVHGGLSPEIRT+DQIR IER++EIPHEG+FCD+MWSDPE+I + W +SPRGAGYLFGA+V  EFNH+NGL+LICRAHQLV EG+KY F  + + TVWSAPNYCYRCGNVAA+LS D  L R+FK+F EV
Sbjct:  112 VKDQLIEESNVQPVTSPVTVCGDIHGQFFDLLELFRSGGNITHTNYIFMGDFVDRGHNSVETFELLLCLKARYPDRITLLRGNHECRQITQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGRILCVHGGLSPEIRTLDQIRVIERHQEIPHEGSFCDLMWSDPEEI-ETWAMSPRGAGYLFGAKVTREFNHINGLELICRAHQLVQEGYKYMFPDQDLVTVWSAPNYCYRCGNVAAILSFDENLSRDFKLFREV 370          
BLAST of mRNA_H-paniculata_contig1340.2126.1 vs. uniprot
Match: M2VZ62_GALSU (Serine/threonine-protein phosphatase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VZ62_GALSU)

HSP 1 Score: 427 bits (1099), Expect = 3.370e-149
Identity = 193/260 (74.23%), Postives = 227/260 (87.31%), Query Frame = 1
Query:    4 VKEILVEENNVQLVRSPVTVCGDLHGQFFDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARWPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKFCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERNREIPHEGAFCDMMWSDPEDIRDAWLISPRGAGYLFGARVAEEFNHLNGLDLICRAHQLVMEGHKYHFASKSVATVWSAPNYCYRCGNVAAVLSLDNKLGREFKIFHEV 783
            VKEIL+EE+NVQ V SPVTVCGD+HGQF DLLEL   GG+VP+T+YIFMGDFVDRG+NS+ETF LL+ LKAR+P  +TLLRGNHESRQITQVYGFY+EC RKYGNAN WK+C EVFD+L +AAL+D E+LCVHGGLSP+IRT+DQIRT++R +EIPHEGAFCD+MWSDPEDI + W +SPRGAG+LFG++V  EFNH+N L LICRAHQLV EG+KY F  +S+ TVWSAPNYCYRCGNVAA+L+ D  L REFKIF EV
Sbjct:   30 VKEILIEESNVQPVSSPVTVCGDIHGQFHDLLELFRTGGEVPETNYIFMGDFVDRGYNSLETFTLLLCLKARYPSRVTLLRGNHESRQITQVYGFYDECQRKYGNANAWKYCCEVFDYLTIAALIDGEILCVHGGLSPDIRTLDQIRTVDRRQEIPHEGAFCDLMWSDPEDI-ETWAVSPRGAGWLFGSKVTSEFNHINKLSLICRAHQLVQEGYKYMFPERSLVTVWSAPNYCYRCGNVAAILAFDENLEREFKIFREV 288          
BLAST of mRNA_H-paniculata_contig1340.2126.1 vs. uniprot
Match: L8GWF5_ACACA (Serine/threonine-protein phosphatase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWF5_ACACA)

HSP 1 Score: 426 bits (1095), Expect = 1.320e-148
Identity = 192/260 (73.85%), Postives = 230/260 (88.46%), Query Frame = 1
Query:    4 VKEILVEENNVQLVRSPVTVCGDLHGQFFDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARWPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKFCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTIERNREIPHEGAFCDMMWSDPEDIRDAWLISPRGAGYLFGARVAEEFNHLNGLDLICRAHQLVMEGHKYHFASKSVATVWSAPNYCYRCGNVAAVLSLDNKLGREFKIFHEV 783
            VKE+L+EE+NVQ V +PVT+CGD+HGQF+DLLEL  +GG++P T+YIFMGDFVDRG+ S+ETF LL+ALKARWPD +TLLRGNHESRQITQVYGFY+EC +KYGNAN WK+C +VFD+L LAALVD +VLCVHGGLSP+IRTIDQIRTI RN+EIPHEGAFCD+MWSDPE+I + W ISPRGAG+LFG++V EEF  +NGL+LICRAHQLV EG+KY F  K++ TVWSAPNYCYRCGNVA++L LD  L R+FKIF+ V
Sbjct:   29 VKELLLEESNVQPVAAPVTICGDIHGQFYDLLELFRIGGEIPQTNYIFMGDFVDRGYYSLETFTLLLALKARWPDKITLLRGNHESRQITQVYGFYDECQQKYGNANAWKYCTQVFDYLTLAALVDGKVLCVHGGLSPDIRTIDQIRTIPRNQEIPHEGAFCDLMWSDPEEI-ETWQISPRGAGWLFGSKVTEEFTRVNGLELICRAHQLVQEGYKYMFPKKNLVTVWSAPNYCYRCGNVASILELDENLNRDFKIFNAV 287          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1340.2126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXD6_ECTSI1.630e-18893.49Serine/threonine-protein phosphatase n=2 Tax=Ectoc... [more]
A0A835ZDV3_9STRA2.050e-16280.00Serine/threonine-protein phosphatase n=1 Tax=Tribo... [more]
W7TS65_9STRA2.410e-16080.77Serine/threonine-protein phosphatase n=2 Tax=Monod... [more]
K3X097_GLOUD2.800e-15476.92Serine/threonine-protein phosphatase n=4 Tax=Pythi... [more]
A0A024UH92_9STRA7.220e-15375.77Serine/threonine-protein phosphatase n=6 Tax=Sapro... [more]
A0A1V9ZA30_9STRA8.400e-15274.62Serine/threonine-protein phosphatase n=1 Tax=Achly... [more]
M4BZB8_HYAAE3.480e-15075.77Serine/threonine-protein phosphatase n=24 Tax=Pero... [more]
F0WDQ3_9STRA4.440e-15074.62Serine/threonine-protein phosphatase n=2 Tax=Albug... [more]
M2VZ62_GALSU3.370e-14974.23Serine/threonine-protein phosphatase n=1 Tax=Galdi... [more]
L8GWF5_ACACA1.320e-14873.85Serine/threonine-protein phosphatase n=1 Tax=Acant... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1340contigH-paniculata_contig1340:12382..24729 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score530.0
Seed ortholog evalue6.2e-148
Seed eggNOG ortholog2880.D7FXD6
Preferred namePPP6C
KEGG koko:K01090,ko:K15423,ko:K15427,ko:K15498
KEGG Pathwayko04922,map04922
Hectar predicted targeting categoryother localisation
GOsGO:0000082,GO:0000159,GO:0000226,GO:0000228,GO:0000235,GO:0000278,GO:0000785,GO:0000790,GO:0001302,GO:0001932,GO:0001933,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0004722,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005818,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0005938,GO:0006139,GO:0006140,GO:0006259,GO:0006281,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006468,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007088,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0007346,GO:0007568,GO:0007569,GO:0007623,GO:0008033,GO:0008150,GO:0008152,GO:0008287,GO:0008360,GO:0009266,GO:0009268,GO:0009314,GO:0009405,GO:0009408,GO:0009416,GO:0009451,GO:0009605,GO:0009607,GO:0009628,GO:0009648,GO:0009649,GO:0009790,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009909,GO:0009910,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010562,GO:0010563,GO:0010564,GO:0010570,GO:0010605,GO:0010639,GO:0010646,GO:0010648,GO:0010948,GO:0015630,GO:0016043,GO:0016050,GO:0016070,GO:0016192,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019747,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030029,GO:0030036,GO:0030447,GO:0030588,GO:0030590,GO:0030865,GO:0030866,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031400,GO:0031505,GO:0031667,GO:0031929,GO:0031974,GO:0031981,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032872,GO:0032873,GO:0032922,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033554,GO:0034248,GO:0034250,GO:0034470,GO:0034599,GO:0034641,GO:0034660,GO:0035556,GO:0036168,GO:0036170,GO:0036171,GO:0036176,GO:0036177,GO:0036178,GO:0036180,GO:0036211,GO:0036244,GO:0040001,GO:0040007,GO:0040008,GO:0042221,GO:0042325,GO:0042326,GO:0042578,GO:0042594,GO:0042752,GO:0042762,GO:0043085,GO:0043153,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043408,GO:0043409,GO:0043412,GO:0043933,GO:0044085,GO:0044093,GO:0044182,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045229,GO:0045786,GO:0045828,GO:0045834,GO:0045839,GO:0045927,GO:0045930,GO:0045935,GO:0045936,GO:0045937,GO:0045981,GO:0046328,GO:0046329,GO:0046483,GO:0046889,GO:0046890,GO:0046907,GO:0047485,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048511,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048581,GO:0048583,GO:0048584,GO:0048585,GO:0048831,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051176,GO:0051179,GO:0051193,GO:0051194,GO:0051196,GO:0051197,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051293,GO:0051341,GO:0051353,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060255,GO:0061024,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070262,GO:0070302,GO:0070303,GO:0070887,GO:0071071,GO:0071073,GO:0071214,GO:0071467,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071944,GO:0071963,GO:0072357,GO:0080090,GO:0080134,GO:0080135,GO:0090033,GO:0090114,GO:0090304,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0104004,GO:0140096,GO:1900428,GO:1900430,GO:1900434,GO:1900436,GO:1900437,GO:1900439,GO:1900440,GO:1900442,GO:1900486,GO:1900490,GO:1900542,GO:1900544,GO:1900741,GO:1900743,GO:1901360,GO:1901564,GO:1902494,GO:1902531,GO:1902532,GO:1902850,GO:1903047,GO:1903293,GO:1903725,GO:1903727,GO:2000026,GO:2000241,GO:2000242,GO:2001210,GO:2001215,GO:2001251
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG0639@1,KOG0373@2759
Ec32 ortholog descriptionSerine/threonine protein phosphatase catalytic subunit
Ec32 orthologEc-18_000020.1
EC3.1.3.16
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009,ko03016,ko03400
Exons5
Model size786
Cds size786
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1340.2126.1prot_H-paniculata_contig1340.2126.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1340 12382..24729 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929062.2608154-CDS-H-paniculata_contig1340:12381..125311622929062.2608154-CDS-H-paniculata_contig1340:12381..12531Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1340 12382..12531 +
1691480717.019942-CDS-H-paniculata_contig1340:12381..125311691480717.019942-CDS-H-paniculata_contig1340:12381..12531Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1340 12382..12531 +
1622929062.2748163-CDS-H-paniculata_contig1340:14874..150001622929062.2748163-CDS-H-paniculata_contig1340:14874..15000Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1340 14875..15000 +
1691480717.0342534-CDS-H-paniculata_contig1340:14874..150001691480717.0342534-CDS-H-paniculata_contig1340:14874..15000Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1340 14875..15000 +
1622929062.2869325-CDS-H-paniculata_contig1340:19815..199771622929062.2869325-CDS-H-paniculata_contig1340:19815..19977Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1340 19816..19977 +
1691480717.0425987-CDS-H-paniculata_contig1340:19815..199771691480717.0425987-CDS-H-paniculata_contig1340:19815..19977Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1340 19816..19977 +
1622929062.3026521-CDS-H-paniculata_contig1340:23927..241191622929062.3026521-CDS-H-paniculata_contig1340:23927..24119Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1340 23928..24119 +
1691480717.0543406-CDS-H-paniculata_contig1340:23927..241191691480717.0543406-CDS-H-paniculata_contig1340:23927..24119Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1340 23928..24119 +
1622929062.3240054-CDS-H-paniculata_contig1340:24573..247291622929062.3240054-CDS-H-paniculata_contig1340:24573..24729Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1340 24574..24729 +
1691480717.0680726-CDS-H-paniculata_contig1340:24573..247291691480717.0680726-CDS-H-paniculata_contig1340:24573..24729Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1340 24574..24729 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1340.2126.1

>prot_H-paniculata_contig1340.2126.1 ID=prot_H-paniculata_contig1340.2126.1|Name=mRNA_H-paniculata_contig1340.2126.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=262bp
QVKEILVEENNVQLVRSPVTVCGDLHGQFFDLLELLAMGGKVPDTSYIFM
GDFVDRGHNSVETFQLLMALKARWPDCMTLLRGNHESRQITQVYGFYEEC
MRKYGNANPWKFCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIRTI
ERNREIPHEGAFCDMMWSDPEDIRDAWLISPRGAGYLFGARVAEEFNHLN
GLDLICRAHQLVMEGHKYHFASKSVATVWSAPNYCYRCGNVAAVLSLDNK
LGREFKIFHEVK
back to top

mRNA from alignment at H-paniculata_contig1340:12382..24729+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1340.2126.1 ID=mRNA_H-paniculata_contig1340.2126.1|Name=mRNA_H-paniculata_contig1340.2126.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12348bp|location=Sequence derived from alignment at H-paniculata_contig1340:12382..24729+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTGAAAGAAATTCTAGTGGAAGAGAATAACGTCCAGCTGGTGAGGTC ACCAGTAACAGTTTGCGGCGACCTGCATGGGCAGTTCTTCGACCTGCTGG AGCTGCTCGCGATGGGTGGAAAGGTTCCGGACACCAGCTATATTTTTATG GTGAGATACAAGGAATAGGGAAGTCGAAGGGGGACGGTTGGTGCCGGGCA GGAGGGGAAAAAGACAGGACGAGGGAAAGAGAAGCCGATACAGAGGCAAA GAGCCCATCCAGACAAGGTGCCCAATCCTCCACACCTCTCAAGTTGCAAG TCTTTTTCCTGACGTGCTCTTTTGATAGTAAAAACATGAGAGGGACCAAT AGTAAGGTAGCTGGGTCTACAGGCCAGGTCCGCACCTCGAGTTCGTTCGC ATTCTTGTGCCGATTTCGCTATTGCACGTGGGCCTTGTGTAACCAAGGTA ATGCACGCTCAGCCAGCTTGCGCCCCCATGAATGTTGAAGTATGAAAAAA AAACACCTGATGTTACGGTTTTTTCTAAAACATTTGTCAAGTGTGGCGTC CTGTGATTTTGATGACTGAGAAGGTCGAGACTTGCATTTCTTTCTGTGAT CCGTAACAGGAGGTCAGCCAACAAGCAAGCGAGGCGGGCTTGTGCTGACC TGGCTCGCCACTTAGCTTTTCGGTCGGTTCCTCGCGTACCGTCGGATCTT GCGTAAAAAGCTTAACCATTTCACCCATATCATAGCCGTTGGGGCCTTGG ACCTGCAGGCTGCCGGGATCTGACGGGATCCGGGTTTTGGACAAGTTTGG TGTAAGACGATTGGTACTACTGTATGCTGTGTGTGATTGATCTGTTTGCA ATCCTCTCCACACTGCAGAAAGGAGAATAACAAGAATTTAGGGAACATGC AGCGATCTACGCCGAACTCTTGCGTCGCGAATTCGTACTTAATCGAGAAA CAATGTTATTCGACTGAGAACCCCGAATCTTGAGTACGAAAATTTTAAGT TGCCGTCCTTTAACTGGAACATGTAAACGATTATACCTGATTTGTCAAGT TCAACGTGTAGCAGGTAGCTGATCAAAATTCGCACCCCAGAAATCGACTC CGTGTCATCAATTCCAAGGAGATGGAGAATAGGATCACAAACTGTAGGGT CACAACCTACGCTATCACGTGAAGGTTTCAGCCGTCCAACTCATGAGTCC CGACCAATTTAACCATTTTTTGGAAGAATGTGTCGAAAACCAAAAAACAT TGTCGAAGTTTCACAATCGACACTACAATTCTGTATTGTATGTAGTGCAG CAACGGATTGAAGCGGTGGATAATATCCCTACCGCAAACATGCTCACGGA GTAGATAAAAGGATTCAACCCCGGGTCGGGTCGGGGGGTCCCAACTCGTC AGGGTCGGGTGTTGACATTTTGGTGTGACCTCTCACCTGTTCAGAATGTG TCGCAGTTCGCTCGCAACAGGCGAGTACGGGTATAACACCCCTCCCCGCC GCGGTGAGCGTGTTTGGGGAAGGCATAAAACGATATAATCCCCGAAGGAA TGGGCGGTTGGGCCATAACCCGACGGGGTAGGGTGTAGGCGTTGCAGGGT TACTCTTACACCTTCAATGGCAACGGAAGTACGATGAAGGACACCCCTTC CGTTGAGCGTATTTGATGAAGAGATGAAATGTTTTCATCCTGGGGACAGG TAGTGGTTCTAAACGATTAGGGTAAGGTGTAGATATTTTAAGGGTTCAAG GGCATCGTATTTCTCTTTCAACGGGCTAATTCGATCGAAAACACCCCCCG GGTTCCCCATCCCCGTGTTTTTGCGTTTTTGTTACTTCCTTTCATTATTT TGTGCGTTTTTCGCCGTAACCAAATGACCAACTATTAACAATTATCCATT TACTCCCATCTACCCTCAACTAAATATTTGACTCTTCCTGAGTTTTGGAA TGTGTCGAACCCGAAAAAAAAACGTGGCCTAGATGACTGTGGATGTACCC CTTGCTAAAATTGAATTCCTAGGCTTTCGGAGTCGGACATCGAAACAGTT CATCGAACACTCGTTCATGTTATCTCCGTTTGATCCCATCCACATCCCGT AAAGCTACGCACAAGTAGATCGGGAGATCTGCGGCGTCAAACACAACATG TTAGCAAGGGCTATTTTTTTTTTGCTTCACCCACAACAACCAACAAAATC TTATGGGTTCTTGTAAATGATAAAAATTGTAATCGAAAATGCGTAAGTGC CTTTCTAACTAAAATTGACTCTGCTTATGGGACCGGGTAAGTATAAAATC AGTGGTGTCTCACAATGTCGATGTGTTGACTAAGTGATTTTGATTTACAA GTCTATATGTTGGTTTGTTGATTTTGACACTGATAGCTTAGTCAACAATT TTGGGAAAGAAAATCGCATATTTTTCTCGATTTTCTCTTTTGCATAAACA TATAATTCTGATTTTACATGCTTGAATAAATGTATACGCGCAGGGAGACT TCGTGGACCGAGGACACAATAGCGTGGAAACGTTCCAATTGCTTATGGCG CTTAAAGCACGATGGCCCGACTGTATGACGCTGCTCCGGGGCAATCACGA GTCGCGGCAAATAACACAGGTCAGTTCCTGCTTGTGTTGTGCCAGGTATA GAGAACAATTACAATGGTCGCTCTGTTTTCGACCACGGTAGTTACACAGG CCAAAATTAAGTTTTTTTTACCACGTGTGGAGACTGTATATCAACTCATT TAGTTCTCAGCAGACATCTCAGGTCGTCTATTTTTTTTGGTGCACCGTGT CAGAGAGCTCAACTGTGTAACCGTTGTCTTTCTTTAGTGCCCTTATTTGG ATTTGTTTGTTTGTCGTATTGTTTCTCTTTGCGCTGCCGTGTTTGAACGA AAAATATTTCTTCGAGTGAAAAATTCCTCACTTGCAGCCAGTTTTGCTCT CGGTGACTCACGACTGTGCAACAACGGTTTGACGTGTGTACGAGTAGCTT CCTGCCAGAACGCCATGCTGACGCCAAAACGCCCTAGGGCCCCTAAACAA CAAATTCTAAAATATATGAATTCTATTACGTTCAGAAGGCTTCCGTCTGG ATTTTGAATCAGAAATTCCGCTTTCACCTTGGGCACGTTCTGACTGCAGC TTGCTGTATTGCCGTCGTGGCCGACGCTATTAGCTCTCATGTTGGAGATA CCGTCTCAGGACCTTGTGCTCTGTTTCTGGTTGACCTCATGAACTCATTT GTTCGTTTTTTTAAAGTACGATCACATGTCTGATATGTGCGCCAATTAAT GTGAGTTTTTGTCTGCACCTGGTTGCCTGAGAAGCACTTTTGTTAATATG GATGAAGCTCGAGTAACTGATGGAACGCCAACGCGAAGGTTCCTCATACT CGTACTTGGAGCCTCCCATATCGAGATAGATTTATCACAGTTCCATGGGA ATCGATTCTCAAGTCTGGGTTTTCCAACCAATTATGTGCTCTAGAGATAG ATTGTCATCTCCCCGGGAATCGATGGATCAATCTCCAAGATACTAGGGAG TTTGCGCAGCCCGAATTCCGTTTGCAAGTTTCGGTTTGGTCGTATATATT CTATCGGTGAGCTGCTCGTCACATACCCTTATGGACTCCGCGTCACTCAC ACCAATGTCTCATGACGAAAGGAATTACTTTTCAAAATTCGTGTACACAT AAAAAAATATTGATGGTCACTGGCTATGACGATGAATTCGTTTTGTAACG AGACTTTGGTGTAGGTGGACTGGGGTCAGGGACGAGGAGCCCACCGTTGG CTATCCTTACGATCAATCCGAAAATTGTAAATGGAATTCGTTTTGTGCAA AAGCGTTACTGCCATAGGTTCCTCGGTCGTATTAGAGTGAGGGTTCAAGG GTGATGGCTGACCGTCAGCTCTACAGCGTCTTCGAACGTAGGGGTTTTCG ATATTGCTTCAGGTGAATCCAGTACCGTGAATTTCTCTATTCGTTAGTGG GTTCATCCGTCGCGCAAACTATGTAGAAAACAATATACTCAAATGCCCGG CCGCTCATCCTCTCAGGGGAAGCATATACCACAACACGCGAGTACGTTAG CAATACACCATAGAACACATAATCAATGGACCGTATGATGCGCATACCGT GTGCAGTGATGTACTGCACACATAACGGATTTACCCAGCAAAGAAGCCGA CAGCACATACAAACAATCAGTCAAGTTAACAGTACTGTAGCAATAATTAG AATTGTGCTACGCACAAGACCCAATGTCATTCATTCGTTGTCGCGGTGAA GTTCGACACGTCGCCCAATGGCGGTATACATGTACAACCAACAAATAGAG CAACCGCCCCCTTCTGATGCTTCAGCATCGGCATAAGAGGCGTCTGACCT GTCGGTTGAAGACATCAAGTTTACAGAAAAGCTGCCCTAATGTACATGCA CTGCCCATTGTTGTGAGCACTTCTGGAGCCTTCCAATAGCTCCAACAGGA GCATTCACCCCGTCACCCAAGCTCCAAAGGGGTCGGCGAGTTGGTTTGGT CGGCTATATGAAACTTCAAGCGTGGATCTTGTTGACAATGATGATACGTG TCGTCACCGGCTAACATATCGTCAAACGAAGTAATCCTTACGACCCGGTC ACATGGTGCGGCCATGGTGGACCTAGGACATTACGAAGACCTCGCACATT CACCGAAGGATACGCCGGCTCACAGCAGCGGTTGCGTGTGTTTCAAGTGC ACGACGCTATGCATTAAGAAATGCAACGCCAATAACAGTCAGCACAGTAC AGCAGCGCGCAGTATCCCACCCAAGCACCCTGTCAAAGGGTGATTGTCGC CAGCGCTTCCTTCGGCTGGCACGAAAAACGGCGCTGAAGGTGTCACAAAC AAGAATCAGAGATGCATACTCAGCAGCACATTTGCGTTACCATCTGTGAG TCAAGGTCATATTCCATGTGCAAGACAAAAACGAATGTCTCAAACACAAC ACTAACCATTAATATATGTCGTTATACATCAAAATACGTTGTGCCCATCT TCGACAAAGTTCATGGTTGTTTCTGGTGGGTTAGGGTTGCCTTCGCGTGC AGCTGAGCGATGAGTCAAGAAAAATACACAGTGCACGCTGATCGCAGACG AAAAGCTGACGTCATGGCGCGTCGTAAGGGGCTTTCGGGCGCAAGTGCCG TACGTAAGTTAGTCAGCTACCTTGAACATGCGTGTGTTAACAAATTATCA TCCCAAGTACTGCGGCAAAGTGGGTGTTGCCAGTTGGCGTTCAGTTGTTT TCTTATCTAGCTGGAGACTTCGGATCAGAGTCTGGTCGATTCACAACAAG ACAGTACTTTGCCTGTCTGGCTATGCATCACCTACACAACCAGAACTTTC TTGAAGGTGCTCACGGCTAAGTTCGCTGCCTTCCTCCCAAGTTGCAGGAG CGTGGGTGAGCTTTAGGCTGCGAATACAAGCGTGTGTGCACCAGTTGTTA GCACAATGCTGTGCGGCACCACATTCTGGTGTTGGCCTGCACTGACGGTC AGCGCAAAAGGTCATTTGTCGTTTTTTACTTGATGGGAGTTGACCGCACC TCTCACATGGACACAGTACTCACTGTGCTCCACCTTGATACGCAAATTCT TTCGCTGCATGCGTACAGCCCATGTAATAAAAATTTCTTCCAGTTTTGAG CCGCTGGAGTGCTGTAGTCAACGACAGCCGAATGGCACTTGACAACCTGC AGCTTTTTGGACTGACTCCCTGTAGCAGCTTATGTCCTGGGTCAACAACA AACACCCACACTCGATAGTAGTCGATACATCCTTTTGGCTATAGATCATC AAGATAAGCTGACTCTTTCGCTAAATGGTGACAGCTCATGTCGTCACCAG CTCCCCAAATTGCAGGAGCTGGCTCGTGTGTCCTCAATAGGGTGGTATCA ACATACGCCGTAATTTTTGAAGGGCCGCCCACCTACACACCTATTCAAAA GGTACTCCCCTCTTGCTGAGAAAATTCATTCGCCGAGTTCCTGCACAACG TATCCTGCACAATACGAATTTATAGCGCATCGCGTGATCAGACCCGCGGT GGGAAACAGATCCAGGGTCAAAAAGCGCAAACGTCCACAAAAGCACCCTA AACCTCGACCAGCAAAAGCAACGCAACGCAACGCCCACTGCATTTCGGCT ATTTTCCAACAGAGAACCGAACAACTTATGGGGACAAGACAAGATGTTCC AGTACATGATAGTATGCACAGTGTGCTCTCAACTAAAACAATGTATGTCA TACTTGGGTCCTTTCTTTCCAACAACTGGAATACTGCATTCAGCCAAACG CTTTCAAACCAATCACAGTTGAACATGACTCCAGTAGGTCCTCTCAACAC TGATTATCTTCTCAGTGCCTGCTTGCCACGAAGAGTTATCACCGCAACCT TACTTCGGCGGCGGTTGTCTTGGATTTCGGAACAGATTTTTACTCTGATA TCAAGTAATGTCGGAAAAGGAATCTTCACAATCAGATTTTTTTCTGGCCA GGGCAGCATCCAGTATGTCGAACGCTACCGGCAACGACAACATGGTAACC GGTGGCGATTTGACTCTGACTACGGTAAGTTCTCTCAGCACCTGTGTCCC TCTCCATGCCTGCTCCGCGCGTAGAGTGAATAGATGTAGTGGAATTTTTG TGGAGTAGATTAAATCAAGTTTCCTCCTACTGGGGAGATGACTCGAGAAA AGTTGTGTTAGAGTCGTGGGAGTTTGAGGAATAACTCGTGGGAGTCTCGG GGTGGCTTCGACTCGTGGCTCGCGACTCTTCGTGGTGTTTCGGGATGAGT CGAGGAACCCTCATAATCACCCGTGGAAGTATTGAGATGAGTGGAGTAAA CCGACTTTTGGCTCGTAGGAGATTCACGGATTACTCGACTGAAGCGAGTT TGACTCCTCGTTTTTCATTTTCGTCAATAATATAGAGTTGTATTCATTCG GAAGAGAAGTGAGGCCTCTTTCAATGTGTCATGTTTCCTTCTTAATACCT TGACAATGAATTGCTAGAACAAAAAAACTGTGACCGGCGAGCACCGATGT TCGAGTTGTAGCATGTTTTAACTGTGGACTTGAGCTGCATAAAAAAATAA GCGGCTCCAGGCGGTATTAAAATCGATTTCGAGCGGGATGAGGACCGGTT TCAAGGTGGCTAAATGCCAATTCCTGAAGGTATCAAACTCTGGTCCAAAA CCGCGAACACTAATGACTCTGAGCTGGCTGCAGAAAGCGGTTCCGAACTG AGGAAGATCTGGTTCCAACCTGTGATGATTACCGCCGCCAGTTTGAACAA TCAACCCCGTCGCAGCCTGCATAGCAACCGGTTCCAACTAGTCTGTCGTG TGCATGCGCTTCTACTATTTCCAACACTCCTAAGGTATATGGCTTTTATG AGGAGTGTATGCGCAAGTACGGCAACGCCAATCCCTGGAAGTTCTGTGTG GAAGTTTTCGATCACCTCAACCTGGCGGCGTTGGTTGACAACGAGGTTCT GTGCGTGCACGGGGGGCTGTCGCCGGAGATACGAACAATTGACCAGGTAT ATAGTCGTGATATTTTTGCTGTTGATTTTGGTTTTTGACTGTTTGCTTTC GGTTTGGCTTTGCGTTTTTTTTTTTGTTCATTTTGTCTGTTAGACACTAG TACAAAGGCATCCTAGTACACTTGCATTGCTTGCTTTTTTCCATACTTGC CGTTCCCAGTCGTTTCGGATTTGTTGGCAGTGCCGGGGTGGTGTCCGACT GATGTCGTGAATCGTCGGAGGGCATCGCACATAATAAAATCTTTGATTAT TCATTCTTCGATTTTTTCCCTTGAAGAAATAAAATCCGAGAAAAAATGGC AGCAAACCCAAGGTGCGACTCGCATTTTCACTGTATACCCGATCATACTG CATGAGAGCATCTGTGTATTTTGTATCGAATCCATGCGTATAGGTTTCTC CTCTGTTGATGGGATCTACAAATGAACAATATGTTGTTGACGTTTATTCC GGTTCGCCGTAGTTTCCTTTGTTTTCGAGTCGGATCTGTCCGCCTATTGT CGGAAGGAAAAGAGGTACAAGTACCAGAAAAATGGAAGGAAAGGTTCGGT AGGATTTTGTGTGAAACCATCAATAGTCCGTTCTCGCTCCAGCTTTGGGA GTTTGACGTAAATTTCGAGCCGAGAGTATTGTTGGCACTGAGGCTTTCAC GAAAGTGTTTCGTGTTTTTTTTTTTGGTTCTAAGTTTGAGGTCATTTTCA GGATTTCGGGTTCAGAGATAACGCCCATGTCTTCCTAGTGGGAATAAAAA TGCCACTTGTTCAAGTCTTGTTATCAGTAAGTGGTTTATTACTCATATTC AGATCAATCTTTCCAATATTAGATTGTTCCGTTGAGTTCAATTTGGGGCA CTTGTTCTAAACGTGTTCACTCACTGAAAAACCAGAAAAGTGTAGATAAA TTCGCAACAACAGAAATACAAGCGCAAGTGTCGTGATTCCTGGTTACTAA CGATGTGTTCAGGTCAGGCCTTCAAGTCAACAGCTATTGAGAGTAAAGTT GGCCTGGACGTACATTTTTTTTCTCCCAATCTTCCCATTTTTTGTTTTTG CCATGAATTTGGGATCGCAATGAGTTTGGAGTTGAAACAAAAATCGTCAA TCTCACCGTAGTGTCTACGACATCCACAGAGCGTTGCGGGACAATCGAAC AGGAGACCAGTTACGTTGAATTATGTACCAAATGGTCCCCTACTAGTCAC CAACAAGCCGGACAGAGAAGGTCATGATCAGAGGGATGAAGCCAAGTATT CGCAGTACCCAGACTACGTATCAGAGCGCGCGGCAGTGTCTGGGGTACTT ACACAGTTGAAACGAAGGTTATTGGTTCACGTCGCTTCAGATCAATTACT TGCGCACAATTTTGTGGAAATGGGAGAGTGATTATATACGCGCACTTACG CCAAAAACCGACGTTGGTGAGTCCATTTCTCATGACTGAAATTTTCTCGA GACCTTTTTTTTTCTGGTCACTTTCGCCCCAAAACAAAATTTCGCACAAT GTATCGACAATGTTTTCACCTCTCGGACAAAGACGAATGGAGCATTCGCA ACTATCTCGAACAGTCATTATTTTTCTTTGGTCAACGCGTATTTAGTCGT TTACAAGTCTATGAATGGTCACTCTATAGATAGTCACCAGGTGGTCGTAT ACCCGGCCAGCAGTTACACATCCAGGTCCTGTTTGTTTTCCGGATGGTAC TGTATAAATTGAATGCTCTCTTTGCCCGAGCTTTTCGATGCTCTATCGTA TTACGAGTACAATGCATATTATTTGCGTCACATGAGCATCTGCCCCAACT CGAACAGATGCAGTATTCGTTTCAGATTTTCGTATTTATTCATGTCTTGT AGTCGGATTTATCTGGAGCGTGAAGTTTTTTCGAGAGAAAGTTACACAGC TTTTTTCCAGATCGGCTCAAATGGCCCAAGTAGCCGAACGTTCCCAACTT TCACCTGTTTCTTTCTGAAGACAAAATTCCCGAACTGGTGTGTTGTGCAA AGTTTGCTGCACGCATGCGGATGGTCCCACTATCATTGTAGTAGCCAATC ATCACATATCATTCAGCACGCACCTGTCGTATCTCACAATTTTTTCAGGC ACAAAATTGAATACTGAGTGTAACAGCTCTCATGCATCACACGTTGACAC CGACCCAGCCTAGCTAGAAACACGATTCCGAGGTGGTAACCGCTGGACTA CAGCCTTTCAGGAGCACCCGCAGTCCCCATCGTCCGGCAGCGATGGCAAC CCTCAGCTGGTCTGCAAGGCATGCTCCCGCCGCTGTCATGGATGACGACG GCCATAATGACAGTCCATAATCCATCCTGCCTGTACCTCGAAGCACGTTT CCCGAAACAGGCCGATGATACGTGTATCGTGTTTGATTTGGAGAACGACA AGCCTAGACCAAAGCCATTTGCATCGCGAGGTAAAAACAGTCAGCGTACG TAGACACCATGTTGTGGTGGAACATGTATGCCATTTAGACGTATATCTTC CCATGCTCCACCGTCGATTTACTTCTGTCATGTTGTTTCTCCGGGCTGGG CTACAACTTGCACACACTTTAGTTTCTCGTGTTTTCTGGTCACGACCAAA AGTGACGGATAAAAGAAAAATATATATCGGAAAAAATCCTGCCATAAGAT CGTCCGAAGGGCTTCAAAAGAACGCGAGAAATCCCGAATATTCGGTGTCC GTGTCTTTTTTTGCCCTTCACTACTACCTGGTATCTGTTTCACGGCCCTT GCGCACTTTGTTGGTACTTGAGAAACGATGTGGGTTATATAACATATCGG TCATTATCTGTGCCCTGTGCGTTCGAGAACACGTGGGGCACTCACCAGTA CACAGGCAGCGCAATATGCTCAGTGCGCACGCCAGACGCAGGCACATCTA ACCTCATGGTCCTATGGTCTACATATGAGTGTTAGGACTAGAGTCTATTC ATCCTTGTACTGAATATCAGTTGTTATCGTGTGATGTGTTTTTCCGATCT AGCAGCACATGCAGGCTAAACGAAGTCGATTACAGGTTTTCGTGGTCGCC GCAAGGCCTAATGACGATTCGTCGAATCTCCGCTTTCTTCTCTGCCTCGC AGTTCACGTTGAATCTTGCTTCTGTCCGAAAAGGTCGAAAAGGCAAAGGT TCAGATGTAACTTCACCATGAGATTGTCTGTTCTCCGTGAGAAGGATATT TTAATGTCCAAGATATTTCAAGTTTGATATGTGATCATTTACAACATCTA CTTGGTATTTGTATTTCAAAATATTAATAAAAAAATGCCAAAAGAGCTAC CGTCGGCACCGTGCAAAAAGGCCTTCTAAGGGCCGTTCTAAGTGCGTTGA TGTTTTTTCCCGTTTTTCCCTATTATTTTTTTCCATCCTCTCGGCACAAA AATCAGAGAGCACAGGAAAACAACATTGAAATTGTTGCTGTACGAATGTA AGGATGGAATTTGTGGATAGGGTCAGGGTTAGCTCTGAATCATTTAAAGG TAAGAGCACAAACGACCCACAATTACCAATTACCCATCTGTCACAAGTAC AAGCGCGATACAAGGCAGGTGCAGGCATGAGAAAGAAAAACGCCCCGAGG AGAGACCAAAATTACGGCAAATTGGTTTTCACTACGGCCGGATCTTCACA ATTTTATTTGACCTTTCGACTGTTTCCAGGTTGTTTTGCCGGGTCCAGAA TGTAATGTGTGTGTTGACTCACGCTAACAATCAACTGTTGAAAATCTTAC ATACATTCGTGATTCATATGTGCCTGACTCCTGCAGAAGTATCCCAAATG TGTCTCGCGCTAGGGGTCAAACAGGTGATGCGAGGAAAATAACACCGAAA TACCCATGGAAGCATTTGGATAAAGCATGAATTTATTCCGAAACCACCAA CCTTGAAGTGCGTTGACTTGGCATGGTATCTGATGCAAATACGCAGATCC GCACGATAGAGCGCAATCGAGAGATCCCACACGAAGGCGCGTTCTGTGAC ATGATGTGGTCGGATCCGGAGGACATCCGCGACGCATGGTTGATCAGTCC TCGGGGCGCAGGGTACCTCTTCGGGGCTAGGGTGGCGGAAGAGTTCAACC ATCTCAACGGACTAGACCTCATCTGTAGAGCACATCAGGTCAGGCAGTAC ACACAGTTGTAGGTTTGGGTGCATCCCTTCTTTGTAATTTTGTTTTCATT TCCTTTCCCGACTTTGCTGTCTAAAACCCATGTTACTTCGTCAGCGATTT TGAGTTTTGGTTCCTGGACCTATTAAATGTCTCTCTTGTTACTGTAGCTG TTCTCCGACAAGACGTACGTTACCAGAACTCTGCGATTACTAGTGTACCA CGTTTAGTGGCCATATTCCGACAAAGTGGAGACTTGGATACGGCGTTGTG CAAGCGCCATCAGGTCTGAGGTTTGTTGTTTTTGTCCTGTCGTAAACCTT GGGGCAACGCATTGTGAAACACAAGGTAGTGTACTGCTTGCGCTACCATT TTTTCCTAGCCATGTGTCTTCCTTTGTATTTGATGCATTATCGTGAAAAA TCATGACCAACGCAACAACGACACGCTTGCTGCCCCATTCAGCTGGTGAT GGAGGGACACAAGTATCACTTCGCCAGTAAAAGCGTTGCGACGGTGTGGA GCGCCCCGAACTACTGCTATCGCTGCGGGAACGTAGCGGCGGTTTTGTCG TTGGACAACAAACTCGGGAGAGAATTCAAGATTTTTCACGAGGTAAAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1340:12382..24729+

>mRNA_H-paniculata_contig1340.2126.1 ID=mRNA_H-paniculata_contig1340.2126.1|Name=mRNA_H-paniculata_contig1340.2126.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1572bp|location=Sequence derived from alignment at H-paniculata_contig1340:12382..24729+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTGAAAGAAATTCTAGTGGAAGAGAATAACGTCCAGCTGGTGAGGTC
ACCAGTAACAGTTTGCGGCGACCTGCATGGGCAGTTCTTCGACCTGCTGG
AGCTGCTCGCGATGGGTGGAAAGGTTCCGGACACCAGCTATATTTTTATG
CAGGTGAAAGAAATTCTAGTGGAAGAGAATAACGTCCAGCTGGTGAGGTC
ACCAGTAACAGTTTGCGGCGACCTGCATGGGCAGTTCTTCGACCTGCTGG
AGCTGCTCGCGATGGGTGGAAAGGTTCCGGACACCAGCTATATTTTTATG
GGAGACTTCGTGGACCGAGGACACAATAGCGTGGAAACGTTCCAATTGCT
TATGGCGCTTAAAGCACGATGGCCCGACTGTATGACGCTGCTCCGGGGCA
ATCACGAGTCGCGGCAAATAACACAGGGAGACTTCGTGGACCGAGGACAC
AATAGCGTGGAAACGTTCCAATTGCTTATGGCGCTTAAAGCACGATGGCC
CGACTGTATGACGCTGCTCCGGGGCAATCACGAGTCGCGGCAAATAACAC
AGGTATATGGCTTTTATGAGGAGTGTATGCGCAAGTACGGCAACGCCAAT
CCCTGGAAGTTCTGTGTGGAAGTTTTCGATCACCTCAACCTGGCGGCGTT
GGTTGACAACGAGGTTCTGTGCGTGCACGGGGGGCTGTCGCCGGAGATAC
GAACAATTGACCAGGTATATGGCTTTTATGAGGAGTGTATGCGCAAGTAC
GGCAACGCCAATCCCTGGAAGTTCTGTGTGGAAGTTTTCGATCACCTCAA
CCTGGCGGCGTTGGTTGACAACGAGGTTCTGTGCGTGCACGGGGGGCTGT
CGCCGGAGATACGAACAATTGACCAGATCCGCACGATAGAGCGCAATCGA
GAGATCCCACACGAAGGCGCGTTCTGTGACATGATGTGGTCGGATCCGGA
GGACATCCGCGACGCATGGTTGATCAGTCCTCGGGGCGCAGGGTACCTCT
TCGGGGCTAGGGTGGCGGAAGAGTTCAACCATCTCAACGGACTAGACCTC
ATCTGTAGAGCACATCAGATCCGCACGATAGAGCGCAATCGAGAGATCCC
ACACGAAGGCGCGTTCTGTGACATGATGTGGTCGGATCCGGAGGACATCC
GCGACGCATGGTTGATCAGTCCTCGGGGCGCAGGGTACCTCTTCGGGGCT
AGGGTGGCGGAAGAGTTCAACCATCTCAACGGACTAGACCTCATCTGTAG
AGCACATCAGCTGGTGATGGAGGGACACAAGTATCACTTCGCCAGTAAAA
GCGTTGCGACGGTGTGGAGCGCCCCGAACTACTGCTATCGCTGCGGGAAC
GTAGCGGCGGTTTTGTCGTTGGACAACAAACTCGGGAGAGAATTCAAGAT
TTTTCACGAGGTAAAGCTGGTGATGGAGGGACACAAGTATCACTTCGCCA
GTAAAAGCGTTGCGACGGTGTGGAGCGCCCCGAACTACTGCTATCGCTGC
GGGAACGTAGCGGCGGTTTTGTCGTTGGACAACAAACTCGGGAGAGAATT
CAAGATTTTTCACGAGGTAAAG
back to top