mRNA_H-paniculata_contig13388.2115.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13388.2115.1 vs. uniprot
Match: D7FYD4_ECTSI (STI1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD4_ECTSI) HSP 1 Score: 165 bits (417), Expect = 1.300e-48 Identity = 89/129 (68.99%), Postives = 100/129 (77.52%), Query Frame = 1 Query: 1 RRCRSPVMCEAAEGGAGADSAPG---ENGDDSVDPDAMGVAKMRASEIKAELDMRGVGYAGIFEKDELVSKLIEARSLGKADPSLIDDFIKDNLERKMDPEIAESFEKDLVDDEKLKDLTAADGTLPGG 378 R +P+ A E G AD G E+ DD DPDA GVAKMRASEIKAELDMRGVGY GIFEKDELV +LIEARSLG+ADPS+IDDF K+NLE +MDPE A F DL+++EKLKDLTAADGTLPGG Sbjct: 54 RSATAPLAMMAGEDGTSADGGQGAEEEDEDDKTDPDAEGVAKMRASEIKAELDMRGVGYTGIFEKDELVERLIEARSLGRADPSIIDDFNKENLENRMDPERAAGFADDLLNEEKLKDLTAADGTLPGG 182
BLAST of mRNA_H-paniculata_contig13388.2115.1 vs. uniprot
Match: A0A7S2UTT4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTT4_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 6.140e-19 Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 91 DPDAMGVAKMRASEIKAELDMRGVGYAGIFEKDELVSKLIEARSLGKADPSLIDDFIKDNLERKM--DPEIAES---FEKDLVDDEKLKDLTAADGTLPGG 378 D + + V +M+ SEIKAEL++R + +AG+FEK+ELV L EAR G+ADPS++D F K E ++ DP+ A KDL D E+LKD +A DGTLPGG Sbjct: 54 DDEEVPVGEMKVSEIKAELELRKISWAGVFEKEELVRLLKEAREEGRADPSIVDQFNKQIFENRIQDDPDAASEKIPSPKDL-DPEQLKDWSAGDGTLPGG 153
BLAST of mRNA_H-paniculata_contig13388.2115.1 vs. uniprot
Match: A0A7S4MRL7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MRL7_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 5.530e-18 Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 115 KMRASEIKAELDMRGVGYAGIFEKDELVSKLIEARSLGKADPSLIDDFIKDNLERKMDPEIAESFEKDLVDDEKLKDLTAADGTLPGG 378 KMR SE+KAELD+RGV Y+G F+K+ L +KL++AR+ GKA+P +IDDF K L+ + + E+ + DE ++ + DGTLPGG Sbjct: 98 KMRVSELKAELDLRGVDYSGCFDKESLAAKLLQARATGKANPDIIDDFNKMRLDETI------AGEETSISDEDIQQMVGGDGTLPGG 179
BLAST of mRNA_H-paniculata_contig13388.2115.1 vs. uniprot
Match: A0A7S2S7X7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7X7_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 8.600e-15 Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 103 MGVAKMRASEIKAELDMRGVGYAGIFEKDELVSKLIEARSLGKADPSLIDDFIKDNLERKMDPEIAES-FEKDLVDDEKLKDLTAADGTLPGG 378 M V M+A EIKAELD+RGV Y G ++K +LV L EAR G+ DP +++DF K E+ FE +DDE +K++ A DG+LPGG Sbjct: 54 MPVENMKAQEIKAELDLRGVSYTGCYDKTDLVKLLEEARLSGRCDPQVLNDFNKGVAEKMAGGSTTPGGFE---IDDEAMKEVIAGDGSLPGG 143
BLAST of mRNA_H-paniculata_contig13388.2115.1 vs. uniprot
Match: A0A7S4ET52_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ET52_CHRCT) HSP 1 Score: 76.6 bits (187), Expect = 1.610e-14 Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 118 MRASEIKAELDMRGVGYAGIFEKDELVSKLIEARSLGKADPSLIDDFIKDNLERKMDPEIAESFEKDLVDDEKLKDLTAADGTLPGG 378 MRASEIKAELD+RGV YA +EK+EL +L +AR G+ADP ++ F + + +R + A++ E+D+ D+TA DG+LPGG Sbjct: 75 MRASEIKAELDLRGVAYADCYEKEELAERLAKARRSGEADPEILRKFNEASAQRAWE---ADATEQDVEPAAAAVDVTAGDGSLPGG 158
BLAST of mRNA_H-paniculata_contig13388.2115.1 vs. uniprot
Match: A0A7S2A2U0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2U0_TRICV) HSP 1 Score: 76.3 bits (186), Expect = 2.880e-14 Identity = 42/100 (42.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 79 DDSVDPDAMGVAKMRASEIKAELDMRGVGYAGIFEKDELVSKLIEARSLGKADPSLIDDFIKDNLERKMDPEIAESFEKDLVDDEKLKDLTAADGTLPGG 378 D+ D + + KM+ SEIKAEL+MRGV YA F+++ L +L+EARS G+ADPS++D F + E +DD+ L++ DGTLPGG Sbjct: 82 DEDDDEEDVEPGKMKVSEIKAELEMRGVRYADCFDRESLEGRLLEARSTGRADPSIVDAFNQKGGEG-----------PPQIDDDVLQNAVGGDGTLPGG 170
BLAST of mRNA_H-paniculata_contig13388.2115.1 vs. uniprot
Match: A0A7R9U2K5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2K5_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 6.330e-14 Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 109 VAKMRASEIKAELDMRGVGYAGIFEKDELVSKLIEARSLGKADPSLIDDFIKDNLERKMDPEIAESFEKDLVDDEKLKDLTAADGTLPGG 378 V+ MR SEIKAELD+RGV Y FE DEL +L +AR GKAD ++D+F + E K + + E D D+E+L L A DGTLPGG Sbjct: 45 VSGMRVSEIKAELDLRGVLYDDCFEADELRRRLEDARLSGKADVGVVDNFNRIQEEAKAE----NADEIDEFDEEQLASLLAGDGTLPGG 130
BLAST of mRNA_H-paniculata_contig13388.2115.1 vs. uniprot
Match: B8C8G9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8G9_THAPS) HSP 1 Score: 73.6 bits (179), Expect = 2.300e-13 Identity = 46/97 (47.42%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 88 VDPDAMGVAKMRASEIKAELDMRGVGYAGIFEKDELVSKLIEARSLGKADPSLIDDFIKDNLERKMDPEIAESFEKDLVDDEKLKDLTAADGTLPGG 378 VDP G +M+ SEIK+ELD+R V Y F+++ L +L EAR GKADPSLID+F + NLE + E A V D L+ DGTLPGG Sbjct: 63 VDPSLPG--QMKISEIKSELDLRKVNYNDCFDREALEIRLNEARCSGKADPSLIDEFNRRNLEANVKGEDALE-----VTDNMLESAVGGDGTLPGG 152
BLAST of mRNA_H-paniculata_contig13388.2115.1 vs. uniprot
Match: A0A8J6CBG9_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBG9_DIALT) HSP 1 Score: 71.6 bits (174), Expect = 6.790e-13 Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 82 DSVDPDAMGVAKMRASEIKAELDMRGVGYAGIFEKDELVSKLIEARSLGKADPSLIDDFIKDNLER 279 +S+D + VA+M +IKAEL++RGV +AG FEK +LV +L+ AR G+ADPS++D F DNLER Sbjct: 25 ESLDGEFERVAQMSVGDIKAELELRGVNFAGCFEKGDLVRRLVLARKQGEADPSIVDRFNADNLER 90
BLAST of mRNA_H-paniculata_contig13388.2115.1 vs. uniprot
Match: A0A7S0INP6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0INP6_9EUKA) HSP 1 Score: 71.6 bits (174), Expect = 1.350e-12 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 115 KMRASEIKAELDMRGVGYAGIFEKDELVSKLIEARSLGKADPSLIDDFIKDNLERKMDPEIAESFEKDLVDDEKLKDLTAADGTLPGG 378 KM+ SE+KAELD+R V Y G FEK+E +L AR+ G+ADP+LID+F + +ER + A S D + ++ A+DG LPGG Sbjct: 75 KMKVSELKAELDLRKVNYEGCFEKEEFARRLASARASGRADPTLIDEFNRQAVERAWTADGAGSSMP--PDFQAATEVVASDGGLPGG 160 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13388.2115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13388.2115.1 >prot_H-paniculata_contig13388.2115.1 ID=prot_H-paniculata_contig13388.2115.1|Name=mRNA_H-paniculata_contig13388.2115.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp MCEAAEGGAGADSAPGENGDDSVDPDAMGVAKMRASEIKAELDMRGVGYAback to top mRNA from alignment at H-paniculata_contig13388:4484..7023+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13388.2115.1 ID=mRNA_H-paniculata_contig13388.2115.1|Name=mRNA_H-paniculata_contig13388.2115.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2540bp|location=Sequence derived from alignment at H-paniculata_contig13388:4484..7023+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13388:4484..7023+ >mRNA_H-paniculata_contig13388.2115.1 ID=mRNA_H-paniculata_contig13388.2115.1|Name=mRNA_H-paniculata_contig13388.2115.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at H-paniculata_contig13388:4484..7023+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |