mRNA_H-paniculata_contig13319.2074.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13319.2074.1 vs. uniprot
Match: D7FRB8_ECTSI (Thaumatin-domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRB8_ECTSI) HSP 1 Score: 107 bits (267), Expect = 1.490e-25 Identity = 42/65 (64.62%), Postives = 53/65 (81.54%), Query Frame = 1 Query: 1 YKYMGLQYSRECFCGDYYFTPENEAIPADTCNLPCAGDPDITCGGPWTNSVYIVGDPSEKTPEEI 195 YKYM LQYS++CFC D Y+T E +AIP DTCN+PC GD ++ CGG W+NS+YIVGDP+E T EE+ Sbjct: 286 YKYMALQYSQDCFCADTYYTAERDAIPTDTCNMPCKGDENVICGGAWSNSIYIVGDPTEMTEEEL 350
BLAST of mRNA_H-paniculata_contig13319.2074.1 vs. uniprot
Match: A0A8B6FEV9_MYTGA (WSC domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6FEV9_MYTGA) HSP 1 Score: 64.7 bits (156), Expect = 4.600e-11 Identity = 27/54 (50.00%), Postives = 35/54 (64.81%), Query Frame = 1 Query: 1 YKYMGLQYSRECFCGDYYFTPENEAIPADTCNLPCAGDPDITCGGPWTNSVYIV 162 YKY+GLQY++EC+CG+ T N P C +PC+GD + CGG NSVY V Sbjct: 153 YKYLGLQYAQECWCGNKMDTVRNHRAPDTECKMPCSGDKNRMCGGGCRNSVYYV 206
BLAST of mRNA_H-paniculata_contig13319.2074.1 vs. uniprot
Match: A0A8K0E9J7_BRALA (PCSK9 protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0E9J7_BRALA) HSP 1 Score: 65.5 bits (158), Expect = 8.530e-11 Identity = 28/52 (53.85%), Postives = 33/52 (63.46%), Query Frame = 1 Query: 1 YKYMGLQYSRECFCGDYYFTPENEAIPADTCNLPCAGDPDITCGGPWTNSVY 156 Y+Y GLQY +ECFCGD + A P CN PC+GD TCGG W NS+Y Sbjct: 372 YRYAGLQYGKECFCGDNF--GGFGAAPESECNKPCSGDAAKTCGGDWRNSIY 421
BLAST of mRNA_H-paniculata_contig13319.2074.1 vs. uniprot
Match: A0A371CTL9_9APHY (WSC-domain-containing protein n=2 Tax=Polyporus TaxID=5637 RepID=A0A371CTL9_9APHY) HSP 1 Score: 64.3 bits (155), Expect = 2.160e-10 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = 1 Query: 1 YKYMGLQYSRECFCGDYYFTPENEAIPADTCNLPCAGDPDITCGGPWTNSVY 156 Y G++Y REC+CG+ + + +++PA TCN+ CAGD TCGG W + + Sbjct: 569 YSLAGIEYGRECYCGNTFSNSQGKSLPASTCNMACAGDKTATCGGSWALTAF 620
BLAST of mRNA_H-paniculata_contig13319.2074.1 vs. uniprot
Match: A0A371DRZ6_9APHY (WSC-domain-containing protein n=2 Tax=Polyporus TaxID=5637 RepID=A0A371DRZ6_9APHY) HSP 1 Score: 62.8 bits (151), Expect = 3.890e-10 Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 1 Query: 1 YKYMGLQYSRECFCGD-YYFTPENEAIPADTCNLPCAGDPDITCGGPWTNSVY 156 Y Y G++Y+ EC CG +P +A PA C++PCAGD D+ CGGPW +Y Sbjct: 82 YTYAGVEYADECHCGTGLTSSPPPQAAPAAECDMPCAGDADLACGGPWRIQIY 134
BLAST of mRNA_H-paniculata_contig13319.2074.1 vs. uniprot
Match: A0A8B6EF31_MYTGA (WSC domain-containing protein n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6EF31_MYTGA) HSP 1 Score: 61.2 bits (147), Expect = 4.150e-10 Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 1 Query: 1 YKYMGLQYSRECFCGDYYFTPENEAIPADTCNLPCAGDPDITCGGPWTNSVYIV 162 YKY+GLQ S C CG+ Y++ CN PCAG+P+ CGG W N++Y V Sbjct: 101 YKYLGLQASHWCLCGNRYYSHAFPQASELQCNYPCAGEPNRMCGGAWRNAIYEV 154
BLAST of mRNA_H-paniculata_contig13319.2074.1 vs. uniprot
Match: A0A8B6GEC8_MYTGA (WSC domain-containing protein (Fragment) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GEC8_MYTGA) HSP 1 Score: 58.9 bits (141), Expect = 7.880e-10 Identity = 23/53 (43.40%), Postives = 32/53 (60.38%), Query Frame = 1 Query: 1 YKYMGLQYSRECFCGDYYFTPENEAIPADTCNLPCAGDPDITCGGPWTNSVYI 159 YKY GLQY +CFCG+ + +P CN+ CA + + CGG + NS+YI Sbjct: 36 YKYSGLQYRTQCFCGNKLANKQYPRVPESDCNMACADETNRMCGGGYRNSIYI 88
BLAST of mRNA_H-paniculata_contig13319.2074.1 vs. uniprot
Match: UPI00160102B7 (uncharacterized protein LOC118427567 isoform X1 n=3 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI00160102B7) HSP 1 Score: 62.4 bits (150), Expect = 1.040e-9 Identity = 26/52 (50.00%), Postives = 32/52 (61.54%), Query Frame = 1 Query: 1 YKYMGLQYSRECFCGDYYFTPENEAIPADTCNLPCAGDPDITCGGPWTNSVY 156 Y+Y GLQY +ECFCGD + + A P C+ PC G TCGG W NS+Y Sbjct: 376 YRYAGLQYGKECFCGDSF--GQFGAAPESECSTPCTGSSADTCGGNWRNSIY 425
BLAST of mRNA_H-paniculata_contig13319.2074.1 vs. uniprot
Match: A0A420Y4E0_9PEZI (WSC domain-containing protein n=1 Tax=Coniochaeta pulveracea TaxID=177199 RepID=A0A420Y4E0_9PEZI) HSP 1 Score: 60.1 bits (144), Expect = 1.780e-9 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 1 Query: 1 YKYMGLQYSRECFCGDYYFTPENEAIPADTCNLPCAGDPDITCGGPWTNSVYIVG 165 Y+Y GL+YSREC+C Y + +E + C+LPCAGD + CGG SVY+VG Sbjct: 101 YQYAGLEYSRECWCAPY-LSGASEKMDEAECDLPCAGDEGVVCGGNAKLSVYMVG 154
BLAST of mRNA_H-paniculata_contig13319.2074.1 vs. uniprot
Match: A0A1I8HPB6_9PLAT (WSC domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8HPB6_9PLAT) HSP 1 Score: 60.1 bits (144), Expect = 1.810e-9 Identity = 27/60 (45.00%), Postives = 37/60 (61.67%), Query Frame = 1 Query: 1 YKYMGLQYSRECFCGDYYFTPENEAIPADTCNLPCAGDPDITCGGPWTNSVYIVGDPSEK 180 YKY+G+QY+ +CFCG+ Y A A TC++ C G D CGG W N+VY G +E+ Sbjct: 40 YKYLGVQYASQCFCGNKYGRYGKGA--AHTCSMACNGKKDEICGGVWRNNVYATGREAEE 97 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13319.2074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13319.2074.1 >prot_H-paniculata_contig13319.2074.1 ID=prot_H-paniculata_contig13319.2074.1|Name=mRNA_H-paniculata_contig13319.2074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp MGLQYSRECFCGDYYFTPENEAIPADTCNLPCAGDPDITCGGPWTNSVYIback to top mRNA from alignment at H-paniculata_contig13319:6844..7050+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13319.2074.1 ID=mRNA_H-paniculata_contig13319.2074.1|Name=mRNA_H-paniculata_contig13319.2074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=207bp|location=Sequence derived from alignment at H-paniculata_contig13319:6844..7050+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13319:6844..7050+ >mRNA_H-paniculata_contig13319.2074.1 ID=mRNA_H-paniculata_contig13319.2074.1|Name=mRNA_H-paniculata_contig13319.2074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=396bp|location=Sequence derived from alignment at H-paniculata_contig13319:6844..7050+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |