mRNA_H-paniculata_contig13224.2023.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig13224.2023.1 vs. uniprot
Match: D7FXN7_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN7_ECTSI) HSP 1 Score: 181 bits (460), Expect = 5.560e-51 Identity = 84/102 (82.35%), Postives = 93/102 (91.18%), Query Frame = 1
Query: 1 AANLRLCPEFLCWAYHKSAKRLRDEVITKKAPQQFLRSYLAQVIKPCYLTLAEQYEDAGAGSKPYMIKNYDDFNETFWVRSCLKLDIVGLTQDALRRKFTKT 306
AANLRLCPEFLCWAYHKSAKRLRD I +AP+QF+RSYL +VI+PCYLTLAEQYED AGS+PYM+KNYDDFNETFW RSCL LD+VGLTQDA+RRKFTKT
Sbjct: 273 AANLRLCPEFLCWAYHKSAKRLRD-AIGDRAPEQFIRSYLKEVIQPCYLTLAEQYEDRKAGSRPYMVKNYDDFNETFWQRSCLGLDVVGLTQDAVRRKFTKT 373
BLAST of mRNA_H-paniculata_contig13224.2023.1 vs. uniprot
Match: A0A6H5L4T6_9PHAE (FKS1_dom1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T6_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.170e-50 Identity = 83/126 (65.87%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 1 AANLRLCPEFLCWAYHKSAKRLRDEVITKKAPQQFLR------------------------SYLAQVIKPCYLTLAEQYEDAGAGSKPYMIKNYDDFNETFWVRSCLKLDIVGLTQDALRRKFTKT 306
AANLRLCPEFLCWAYHKSAKRLRD I +AP+QF+R SYL +VI+PCYLTLAEQYED AGS+PY++KNYDDFNETFW RSCL LD+VGLTQDA+RRKFTKT
Sbjct: 19 AANLRLCPEFLCWAYHKSAKRLRD-AIGDRAPEQFIRHAAYDRLLQRQLGSTRESAPQGIRSYLKEVIQPCYLTLAEQYEDRKAGSRPYLVKNYDDFNETFWQRSCLGLDVVGLTQDAVRRKFTKT 143
BLAST of mRNA_H-paniculata_contig13224.2023.1 vs. uniprot
Match: D7FPK0_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK0_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 1.500e-19 Identity = 50/104 (48.08%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 1 AANLRLCPEFLCWAYHKSAKRLRDEVITKKAPQQFLRSYLAQVIKPCYLTLAEQYEDAGAGSKPYM-IKNYDDFNETFWVRSCLKLDIVGLTQD-ALRRKFTKT 306
A NLR CPEFLC+ YHK + R VI K+P + SYL +VI P Y LAEQ G G + ++NYDDFNE FW CLKL I + + L++KF KT
Sbjct: 212 AGNLRFCPEFLCFLYHKMSHTFRT-VIEGKSPDITVPSYLDEVITPAYSLLAEQLSKIGHGVIDHSSVRNYDDFNEIFWQEECLKLTIATMFEGKTLKKKFQKT 314
BLAST of mRNA_H-paniculata_contig13224.2023.1 vs. uniprot
Match: A0A7N0R990_KALFE (1,3-beta-glucan synthase n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0R990_KALFE) HSP 1 Score: 68.9 bits (167), Expect = 1.930e-11 Identity = 37/94 (39.36%), Postives = 52/94 (55.32%), Query Frame = 1
Query: 1 AANLRLCPEFLCWAYHKSAKRLR---DEVITKKAPQQFL------RSYLAQVIKPCYLTLAEQYEDAGAGSKPYMI-KNYDDFNETFWVRSCLK 252
AANLR PE LC+ +H A + +E I + + ++ ++L V+KP Y T+ + E G GSKP+ +NYDD NE FW R CLK
Sbjct: 179 AANLRFLPECLCYIFHHMAMEMNQVLEEHIDENTGRPYVPYYRGDNAFLRLVVKPIYNTIKNEVESGGNGSKPHSAWRNYDDMNEYFWSRRCLK 272
BLAST of mRNA_H-paniculata_contig13224.2023.1 vs. uniprot
Match: A0A835E832_9POAL (1,3-beta-glucan synthase n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835E832_9POAL) HSP 1 Score: 67.8 bits (164), Expect = 4.880e-11 Identity = 42/116 (36.21%), Postives = 60/116 (51.72%), Query Frame = 1
Query: 1 AANLRLCPEFLCWAYHKSAKRLRDEVITKKAP-------QQFLRSYLAQVIKPCYLTLAEQYEDAGAGSKPYMI-KNYDDFNETFWVRSCLKL------DIVGLTQDALRRKFTKT 306
AAN+R PE LC+ +H AK L + + +A SYL ++IKP Y T+A + + G+ + +NYDDFNE FW RSC +L D L + A R++ KT
Sbjct: 368 AANVRFLPECLCYIFHNMAKELDGILDSSEAEPAKSCITSDRSTSYLERIIKPIYETMAAEANNNNGGTAAHSAWRNYDDFNEYFWSRSCFQLGWPPAEDSKFLRKPAKRKRTGKT 483
BLAST of mRNA_H-paniculata_contig13224.2023.1 vs. uniprot
Match: A0A251VQ24_HELAN (1,3-beta-glucan synthase n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VQ24_HELAN) HSP 1 Score: 66.2 bits (160), Expect = 1.710e-10 Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 1 AANLRLCPEFLCWAYHKSAKRLRDEVITKKAPQQFLR-------SYLAQVIKPCYLTLAEQYEDAGAGSKPYMI-KNYDDFNETFWVRSCLKL 255
AAN+R PE LC+ +H+ + L DE++ ++ + S+L QVI P Y +A + + G P+ +NYDDFNE FW RSCLKL
Sbjct: 307 AANVRFLPECLCYIFHRMGEEL-DEILHQQLAKPAASCVTENGVSFLEQVICPLYNVIAAEANNNENGKAPHSAWRNYDDFNEYFWSRSCLKL 398
BLAST of mRNA_H-paniculata_contig13224.2023.1 vs. uniprot
Match: A0A2U1PLY0_ARTAN (1,3-beta-glucan synthase n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PLY0_ARTAN) HSP 1 Score: 65.9 bits (159), Expect = 2.330e-10 Identity = 37/92 (40.22%), Postives = 50/92 (54.35%), Query Frame = 1
Query: 1 AANLRLCPEFLCWAYHKSAKRLRD---EVITKKAPQQFLR---SYLAQVIKPCYLTLAEQYEDAGAGSKPYMI-KNYDDFNETFWVRSCLKL 255
AAN R PE LC+ +H+ + + D E + K A S+L QV+ P Y +A + + G P+ +NYDDFNE FW RSCLKL
Sbjct: 360 AANARFLPECLCYIFHRMGEEMEDMLKEQLAKPAVSCVTENGVSFLEQVVCPLYDVIAAEAANNNDGKAPHSAWRNYDDFNEYFWSRSCLKL 451
BLAST of mRNA_H-paniculata_contig13224.2023.1 vs. uniprot
Match: A0A811MU58_9POAL (1,3-beta-glucan synthase n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811MU58_9POAL) HSP 1 Score: 65.5 bits (158), Expect = 3.180e-10 Identity = 35/92 (38.04%), Postives = 49/92 (53.26%), Query Frame = 1
Query: 1 AANLRLCPEFLCWAYHKSAKRL------RDEVITKKAPQQFLRSYLAQVIKPCYLTLAEQYEDAGAGSKPYMI-KNYDDFNETFWVRSCLKL 255
AAN+R PE +C+ +H AK L D K + S+L ++I P Y T+AE+ + G + +NYDDFNE FW RSC +L
Sbjct: 332 AANVRFLPECICYIFHNMAKELDGILDSSDAETAKSCTSEGSTSFLERIITPIYDTMAEEAANNKNGKAAHSAWRNYDDFNEYFWSRSCFEL 423
BLAST of mRNA_H-paniculata_contig13224.2023.1 vs. uniprot
Match: A0A811MHC7_9POAL (1,3-beta-glucan synthase n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811MHC7_9POAL) HSP 1 Score: 65.5 bits (158), Expect = 3.190e-10 Identity = 35/92 (38.04%), Postives = 49/92 (53.26%), Query Frame = 1
Query: 1 AANLRLCPEFLCWAYHKSAKRL------RDEVITKKAPQQFLRSYLAQVIKPCYLTLAEQYEDAGAGSKPYMI-KNYDDFNETFWVRSCLKL 255
AAN+R PE +C+ +H AK L D K + S+L ++I P Y T+A + E+ G + +NYDDFNE FW RSC +L
Sbjct: 372 AANVRFLPECICYIFHNMAKELDGILDSSDAETAKSCTSEGSTSFLERIITPIYDTMAAEAENNKNGKAAHSAWRNYDDFNEYFWSRSCFEL 463
BLAST of mRNA_H-paniculata_contig13224.2023.1 vs. uniprot
Match: UPI001CB97C31 (callose synthase 9 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB97C31) HSP 1 Score: 65.1 bits (157), Expect = 4.350e-10 Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 1 AANLRLCPEFLCWAYHKSAKRLRDEVITKKAPQQFLR-------SYLAQVIKPCYLTLAEQYEDAGAGSKPYMI-KNYDDFNETFWVRSCLKL 255
AAN+R PE LC+ +H+ + + D+++ ++ + + S+L QVI P Y +A + ++ G P+ +NYDDFNE FW RSCLKL
Sbjct: 365 AANVRYLPECLCYIFHRMGEEV-DDILRQQLAKPAVSCVTENGVSFLEQVICPLYDVIAAEADNNENGKAPHSAWRNYDDFNEYFWSRSCLKL 456 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13224.2023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13224.2023.1 >prot_H-paniculata_contig13224.2023.1 ID=prot_H-paniculata_contig13224.2023.1|Name=mRNA_H-paniculata_contig13224.2023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp AANLRLCPEFLCWAYHKSAKRLRDEVITKKAPQQFLRSYLAQVIKPCYLTback to top mRNA from alignment at H-paniculata_contig13224:4833..5524+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13224.2023.1 ID=mRNA_H-paniculata_contig13224.2023.1|Name=mRNA_H-paniculata_contig13224.2023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=692bp|location=Sequence derived from alignment at H-paniculata_contig13224:4833..5524+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13224:4833..5524+ >mRNA_H-paniculata_contig13224.2023.1 ID=mRNA_H-paniculata_contig13224.2023.1|Name=mRNA_H-paniculata_contig13224.2023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at H-paniculata_contig13224:4833..5524+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |