mRNA_H-paniculata_contig13221.2019.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13221.2019.1
Unique NamemRNA_H-paniculata_contig13221.2019.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig13221.2019.1 vs. uniprot
Match: D7FTP0_ECTSI (Similar to E1a binding protein P400 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP0_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 3.930e-79
Identity = 176/224 (78.57%), Postives = 196/224 (87.50%), Query Frame = 1 
Query:  358 DDVEAGRALEREAADEQMEFDDNGIASTKEEXXXXXXXXXXXXXESNANGPNXXXXXXXXXXXXXXXX-KEKTDKELEEEFAAWQARTFYCNKVGPDVSALEASLAPIERYALRVRSEVDPFYSLYFRTEAQRREEVEAAGGDLDVDTLEAEKEAEERRQMESGELLACHVGKKRAQRQRELFSRDRARAVSERKKRLLTGEAWELRADAISKLPYWYNRDTGE 1026
            DDVEAGRALE+EAADEQ+EFD+NG +S  EEXXXXXXXXXXXXX        XXXXXXXXXXXX     KEKTDKELEEEFAAWQ      NKVGPDVSALE+SLAPIERYALRVR++VDP+YSLYFRTEAQRREE+EAAGGDLDVD +EAEKE EERRQMESGELLACHV  K ++RQR++FSR+RARAVSERKKRLLTG+AWELR DA+SK+P+WYNRDTG+
Sbjct: 1923 DDVEAGRALEKEAADEQLEFDENGASSKDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFGDDKEKTDKELEEEFAAWQ------NKVGPDVSALESSLAPIERYALRVRTDVDPYYSLYFRTEAQRREEIEAAGGDLDVDAIEAEKEMEERRQMESGELLACHVRIKDSKRQRDMFSRERARAVSERKKRLLTGDAWELRPDAVSKMPFWYNRDTGD 2140
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BLAST of mRNA_H-paniculata_contig13221.2019.1 vs. uniprot
Match: A0A6H5KKD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD6_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 7.460e-79
Identity = 175/225 (77.78%), Postives = 192/225 (85.33%), Query Frame = 1 
Query:  352 DADDVEAGRALEREAADEQMEFDDNGIASTKEEXXXXXXXXXXXXXESNANGPNXXXXXXXXXXXXXXXXKEKTDKELEEEFAAWQARTFYCNKVGPDVSALEASLAPIERYALRVRSEVDPFYSLYFRTEAQRREEVEAAGGDLDVDTLEAEKEAEERRQMESGELLACHVGKKRAQRQRELFSRDRARAVSERKKRLLTGEAWELRADAISKLPYWYNRDTGE 1026
            DADDVEAGRALEREAADEQ+EFD+NG +S  E XXXXXXXXXXXXX        XXXXXXXXXXX     KEKTDKELEEEFAAWQA         PDVSALE+SLAPIERYALRVR++VDP+YSLYFRTEAQRREE+EAAGGDLDVD +EAEKE EERRQMESGELLACHV  K  +RQR++FSR+RARAVSERKKRLLTG+AWELR DA+SK+P+WYNRDTGE
Sbjct: 2258 DADDVEAGRALEREAADEQLEFDENGASSKDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFGDDKEKTDKELEEEFAAWQA--------WPDVSALESSLAPIERYALRVRTDVDPYYSLYFRTEAQRREEIEAAGGDLDVDAIEAEKEMEERRQMESGELLACHVRIKDLKRQRDMFSRERARAVSERKKRLLTGDAWELRPDAVSKMPFWYNRDTGE 2474
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BLAST of mRNA_H-paniculata_contig13221.2019.1 vs. uniprot
Match: A0A7S4NI31_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NI31_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.740e-32
Identity = 85/225 (37.78%), Postives = 120/225 (53.33%), Query Frame = 1 
Query:  352 DADDVEAGRALEREAADEQMEFDDNGIASTKEEXXXXXXXXXXXXXESNANGPNXXXXXXXXXXXXXXXXKEKTDKELEEEFAAWQARTFYCNKVGPDVSALEASLAPIERYALRVRSEVDPFYSLYFRTEAQRREEVEAAGGDLDVDTLEAEKEAEERRQMESGELLACHVGKKRAQRQRELFSRDRARAVSERKKRLLTGEAWELRADAISKLPYWYNRDTGE 1026
            D DDV+A +  ++EA +E  EFD++       E                   P                 K   D  +E+EFAAWQ      NKVG D +A+ ASL P+ERYAL  R E DP  SL  ++E Q  +E  +  G+ D++ +E  K  EE+R +E G+LLA     +   RQR+LF+R+++R  +E+ +R LTGE WE R DA+SK P+W+N DTGE
Sbjct:  893 DEDDVKAMQGAQKEAEEELQEFDEDVQYKENGEGDGQDNTGGEEKKIKETKKPPAKKKTSKQPKPGKEEEKADVDDAMEKEFAAWQ------NKVGVDTAAINASLTPMERYALLFREEKDPSESLQLQSETQEMQEAASLEGEWDMEEIENAKMEEEKRAIEEGDLLATQPPPETLPRQRQLFAREKSRLRAEKLRRKLTGENWETRIDALSKSPFWFNTDTGE 1111
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BLAST of mRNA_H-paniculata_contig13221.2019.1 vs. uniprot
Match: A0A7S3V8R8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8R8_9STRA)

HSP 1 Score: 125 bits (314), Expect = 6.060e-28
Identity = 86/226 (38.05%), Postives = 122/226 (53.98%), Query Frame = 1 
Query:  352 DADDVEAGRALEREAADEQMEFDDNGIASTKEEXXXXXXXXXXXXXESNANGPNXXXXXXXXXXXXXXXXKEKTDKELEEEFAAWQARTFYCNKVGPDVSALEASLAPIERYALRVRSEVDPFYSLYFRTEAQRREEVEAAGGD-LDVDTLEAEKEAEERRQMESGELLACHVGKKRAQRQRELFSRDRARAVSERKKRLLTGEAWELRADAISKLPYWYNRDTGE 1026
            D DDV A R  + EA  E  EFD+N  AS +E+        XXX        P                 +E     LE+EFA WQA+      VG D +++++SL P+ERYAL  + +VDPFYS+++ +E  R EE E+   +  D++ +E  KE  E   +  G+LLA     K   RQR L+ R+++R ++ +K+R LTGE W  + D  SKLP+WYN DTGE
Sbjct: 1577 DEDDVLAMRGAQAEAKAELQEFDENHQASKEEDGNESQGSQXXXKSNDKKQPP---------LEGVKKSEEENQAAILEKEFAVWQAQ------VGVDKASIDSSLNPVERYALNFKEDVDPFYSMWYLSEEDRLEETESLPQEEFDIEAIELMKEELEANAINDGDLLATLPEPKDLLRQRHLYFREKSRLLANKKRRKLTGENWTTKIDGKSKLPFWYNSDTGE 1787
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BLAST of mRNA_H-paniculata_contig13221.2019.1 vs. uniprot
Match: A0A7S4EMN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EMN4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.140e-26
Identity = 78/225 (34.67%), Postives = 126/225 (56.00%), Query Frame = 1 
Query:  352 DADDVEAGRALEREAADEQMEFDDNGIASTKEEXXXXXXXXXXXXXESNANGPNXXXXXXXXXXXXXXXXKEKTDKELEEEFAAWQARTFYCNKVGPDVSALEASLAPIERYALRVRSEVDPFYSLYFRTEAQRREEVEAAGGDLDVDTLEAEKEAEERRQMESGELLACHVGKKRAQRQRELFSRDRARAVSERKKRLLTGEAWELRADAISKLPYWYNRDTGE 1026
            D DD +A R   +EA ++Q EFD+N  A  KE       XXXXXXX                        +   +K+LE+EFAAWQ+        G D  A++  ++P+ERY L+ R ++DPFYS+++  E +R+ E      ++D++ +E +K  EE++ +++ +LLA  +  +   RQR L+ R++ R  SE+ +R +TGE W  + D ++K P+WYN +TGE
Sbjct:  926 DEDDAKALRGARKEAEEDQKEFDEN-TAIPKERSDDDEEXXXXXXXSKGKRKLKETKGRSGTESKPEGDEQNSDEKDLEKEFAAWQSTE------GFDAKAIDHFMSPMERYGLKFREKIDPFYSIFYINEQRRKMEAMEGAEEIDMEEVERQKAMEEQQAIDNQDLLATGIRPEDLVRQRNLYRREKIRLRSEKLRRKITGELWSQKVDGLTKKPFWYNEETGE 1143
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BLAST of mRNA_H-paniculata_contig13221.2019.1 vs. uniprot
Match: A0A7S2AVD5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AVD5_9STRA)

HSP 1 Score: 108 bits (270), Expect = 7.030e-25
Identity = 64/139 (46.04%), Postives = 87/139 (62.59%), Query Frame = 1 
Query:  574 DKELEEEFAAWQARTFYCNKVGPDVSALEASLAPIERYALRVRSEVDPFYSLYFRTEAQRREEVEAAGGDLDVDTLEAEKEAEERRQMESGELLACHVGKKRAQRQRELFSRDRARAVSERKKRLLTGEAWELRADAIS 990
            +K LEEEFAAWQ+        GP++ ALEASL PIER+ALR R+EVDPF S+ + ++ + RE  +    D+ VD +EA K  EE R +E G+LLA  +   R    R LF++ R R   +RK+R  TG+ WE+R D  S
Sbjct:   41 EKALEEEFAAWQSSN------GPNLEALEASLQPIERFALRFRTEVDPFKSMMYLSDLRARESAQDQDDDVXVDAIEAAKAEEEARCLEEGDLLATKLDHGRLGSHRGLFAKMRHRMFLQRKRRRFTGDDWEVRTDGHS 173
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BLAST of mRNA_H-paniculata_contig13221.2019.1 vs. uniprot
Match: A0A7S2E740_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E740_TRICV)

HSP 1 Score: 104 bits (259), Expect = 2.030e-22
Identity = 59/129 (45.74%), Postives = 84/129 (65.12%), Query Frame = 1 
Query:  580 ELEEEFAAWQARTFYCNKVGPDVSALEASLAPIERYALRVRSEVDPFYSLYFRTEAQRREEVEAAGGDLDVDTLEAEKEAEERRQMESGELLACHVGKKRAQRQRELFSRDRARAVSERKKRLLTGEAW 966
            E+E+EFAAWQ      +KVG D  A+ ASL P ERYALR R ++DPF S++F +E Q  EE  +   + DV+ +E EK AEE+R +E G+LLA         RQ++L+ R++AR  +++ +R LTGE W
Sbjct:  137 EMEKEFAAWQ------DKVGVDTEAINASLTPTERYALRFREDIDPFVSVHFYSEQQGNEEAASMEEEWDVEEIEQEKAAEEQRAIEDGDLLATQPQPDTLSRQKQLYLREKARLRAKKLRRKLTGENW 259
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BLAST of mRNA_H-paniculata_contig13221.2019.1 vs. uniprot
Match: A0A7S1XTW8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTW8_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.990e-22
Identity = 59/154 (38.31%), Postives = 90/154 (58.44%), Query Frame = 1 
Query:  565 EKTDKELEEEFAAWQARTFYCNKVGPDVSALEASLAPIERYALRVRSEVDPFYSLYFRTEAQRREEVEAAGGDLDVDTLEAEKEAEERRQMESGELLACHVGKKRAQRQRELFSRDRARAVSERKKRLLTGEAWELRADAISKLPYWYNRDTGE 1026
            +K + E  EEF  WQ       +VG  ++ ++ SL P+ERYA+  +S  DP++S+Y+RT+AQR +++ A     D+   EA K AEE   + SGEL+   V K+  +  R  +  +R R V ERK R L G+ W +R D  ++LP+W N + GE
Sbjct:   90 KKAEAEQNEEFDKWQ------KEVGTSLARIDGSLNPVERYAVNFKSGPDPYFSVYYRTDAQRLQDISADSERWDIHEWEAAKAAEEHEALSSGELIYTAVTKRAVRSLRRRYLSERKRLVQERKLRRLKGDDWVIRTDGKTQLPFWLNLENGE 237
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BLAST of mRNA_H-paniculata_contig13221.2019.1 vs. uniprot
Match: A0A4D9D1C0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1C0_9STRA)

HSP 1 Score: 107 bits (267), Expect = 8.460e-22
Identity = 70/160 (43.75%), Postives = 96/160 (60.00%), Query Frame = 1 
Query:  562 KEKTDKEL-EEEFAAWQARTFYCNKVGPDVSALEASLAPIERYALRVRSEVDPFYSLYFRTEAQRREEVE--AAGGDLDVDTLEAEKEAEERRQMESGELLACHVGKKRAQ--RQRELFSRDRARAVSERKKRLLTGEAWELRADAISKLPYWYNRDTGE 1026
            KE  D  L EEEFAA Q++      +GPDV A+EA L P+ERYA R R+EVDP+YS ++ +E QRR E+E  A    +DV+ LE     EE R +E GE+LA  +   R     Q   + R+R R  +E ++R +TGE W    +A S  PYW ++D+GE
Sbjct: 1239 KEGEDGALGEEEFAAIQSQ------LGPDVGAIEARLRPVERYAFRFRTEVDPYYSFFYLSEEQRRRELEEEAEATAVDVEALERAAAEEEARSLEEGEVLATSMDMAREAVLLQAWGYRRERGRRRAEARRRAMTGENWVRMVEAGSGYPYWLDQDSGE 1392
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BLAST of mRNA_H-paniculata_contig13221.2019.1 vs. uniprot
Match: A0A7R9UGU8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGU8_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.240e-20
Identity = 57/155 (36.77%), Postives = 93/155 (60.00%), Query Frame = 1 
Query:  562 KEKTDKELEEEFAAWQARTFYCNKVGPDVSALEASLAPIERYALRVRSEVDPFYSLYFRTEAQRREEVEAAGGDLDVDTLEAEKEAEERRQMESGELLACHVGKKRAQRQRELFSRDRARAVSERKKRLLTGEAWELRADAISKLPYWYNRDTGE 1026
            ++  +    EEFA+W+       +VG +++ ++ SL+ +ERYA++++S VD FYS+++RT+AQR ++V       D+   E  K  EE   + SGEL+   V KK A+  R  ++ ++ R V  RK R L G+ W +R D  ++LP+W N DTGE
Sbjct: 1548 EKSAEARQNEEFASWR------QEVGTNLARIDESLSAVERYAVKIKSTVDCFYSVHYRTDAQRLQDVTENSERWDIHEWEQAKAQEEHAALSSGELIYTGVTKKEARMLRRRYTAEKQRRVQARKLRRLKGDDWVVRTDGKTQLPFWMNLDTGE 1696
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13221.2019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTP0_ECTSI3.930e-7978.57Similar to E1a binding protein P400 (Partial) (Fra... [more]
A0A6H5KKD6_9PHAE7.460e-7977.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4NI31_9STRA8.740e-3237.78Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3V8R8_9STRA6.060e-2838.05Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4EMN4_9STRA2.140e-2634.67Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S2AVD5_9STRA7.030e-2546.04Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2E740_TRICV2.030e-2245.74Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S1XTW8_9STRA2.990e-2238.31Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A4D9D1C0_9STRA8.460e-2243.75Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7R9UGU8_9STRA1.240e-2036.77Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13221contigH-paniculata_contig13221:1810..7104 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score277.3
Seed ortholog evalue9.4e-72
Seed eggNOG ortholog2880.D7FTP0
KEGG koko:K11320
Hectar predicted targeting categoryother localisation
EggNOG free text desc.helicase activity
EggNOG OGsCOG0553@1,KOG0391@2759
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons7
Model size1028
Cds size1026
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929047.3152192-CDS-H-paniculata_contig13221:1809..19561622929047.3152192-CDS-H-paniculata_contig13221:1809..1956Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 1810..1956 -
1691480711.2835088-CDS-H-paniculata_contig13221:1809..19561691480711.2835088-CDS-H-paniculata_contig13221:1809..1956Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 1810..1956 -
1622929047.3333843-CDS-H-paniculata_contig13221:2660..27341622929047.3333843-CDS-H-paniculata_contig13221:2660..2734Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 2661..2734 -
1691480711.2942264-CDS-H-paniculata_contig13221:2660..27341691480711.2942264-CDS-H-paniculata_contig13221:2660..2734Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 2661..2734 -
1622929047.3480842-CDS-H-paniculata_contig13221:3744..39221622929047.3480842-CDS-H-paniculata_contig13221:3744..3922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 3745..3922 -
1691480711.3037992-CDS-H-paniculata_contig13221:3744..39221691480711.3037992-CDS-H-paniculata_contig13221:3744..3922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 3745..3922 -
1622929047.3646896-CDS-H-paniculata_contig13221:4790..49731622929047.3646896-CDS-H-paniculata_contig13221:4790..4973Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 4791..4973 -
1691480711.313339-CDS-H-paniculata_contig13221:4790..49731691480711.313339-CDS-H-paniculata_contig13221:4790..4973Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 4791..4973 -
1622929047.381825-CDS-H-paniculata_contig13221:5460..55531622929047.381825-CDS-H-paniculata_contig13221:5460..5553Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 5461..5553 -
1691480711.3229916-CDS-H-paniculata_contig13221:5460..55531691480711.3229916-CDS-H-paniculata_contig13221:5460..5553Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 5461..5553 -
1622929047.406313-CDS-H-paniculata_contig13221:5970..62021622929047.406313-CDS-H-paniculata_contig13221:5970..6202Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 5971..6202 -
1691480711.3324509-CDS-H-paniculata_contig13221:5970..62021691480711.3324509-CDS-H-paniculata_contig13221:5970..6202Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 5971..6202 -
1622929047.4239814-CDS-H-paniculata_contig13221:6985..71041622929047.4239814-CDS-H-paniculata_contig13221:6985..7104Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 6986..7104 -
1691480711.3478136-CDS-H-paniculata_contig13221:6985..71041691480711.3478136-CDS-H-paniculata_contig13221:6985..7104Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13221 6986..7104 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13221.2019.1prot_H-paniculata_contig13221.2019.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13221 1810..7104 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13221.2019.1

>prot_H-paniculata_contig13221.2019.1 ID=prot_H-paniculata_contig13221.2019.1|Name=mRNA_H-paniculata_contig13221.2019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=342bp
SSTPHWADARGAHLPLGDIQLYRGEHPQEGSAEATSRLLGDDGGQFQRRA
ARTCDGLYERGGLERYFGRQFSCGRPFCCRGNTRKRSAVVVRRPSDGGGG
DGGGFDSGGRREGKRECDADDVEAGRALEREAADEQMEFDDNGIASTKEE
EKDDDNDADEEVVESNANGPNSTGTSNAAADGDDGEGKEKTDKELEEEFA
AWQARTFYCNKVGPDVSALEASLAPIERYALRVRSEVDPFYSLYFRTEAQ
RREEVEAAGGDLDVDTLEAEKEAEERRQMESGELLACHVGKKRAQRQREL
FSRDRARAVSERKKRLLTGEAWELRADAISKLPYWYNRDTGE
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mRNA from alignment at H-paniculata_contig13221:1810..7104-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13221.2019.1 ID=mRNA_H-paniculata_contig13221.2019.1|Name=mRNA_H-paniculata_contig13221.2019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5295bp|location=Sequence derived from alignment at H-paniculata_contig13221:1810..7104- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGAGCACACCGCATTGGGCAGACGCGAGAGGTGCACATCTACCGCTTGG
TGACATCCAGCTCTATCGAGGAGAACATCCTCAAGAAGGCTCAGCAGAAG
CGACATCTCGACTTCTTGGGTAAGTCAACCGCACCGTGGGGAAAAAGCGG
GGGCGGGAACGAGTTCCGTGTCCCGGTATCATACGTCGTTTTGATCTACG
CTGATTCGCTTCCGCGACGCGATGCTACATGTACGTGCCTTTTGTTGTGC
AGGCGATATTTGTTACCTTCTGGACAATGCTGCACTACGTACGCTCTAAA
TGTACCAAGAGCCTCCTCGTTACATCAAACTCATGTCACCGTTTTTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTTTTTCATGGAATCAATTTTACTTTGC
TATCAGTCGTGCTCTTGAGCTATGCTCCAACTTGGATGTGGAGTCTGTTC
CATTTTGGCTTTGGTTTGTATAAGTTCATTAGCATCGCCAGCACAGTTCG
GAAATAGTGTAACCCAACGCCCGGAATAAATGCTGTGTTTTCCCATGGGT
GTAATAAATAGATTTTACGCATCGTGCTCTCTTTCCTCTTACGTTGATTG
TACCACCGCACTTTCGAACTGTGCACCCCTTTCAGTTTCGAGAGTTACTG
ATGGTTGAGCATACATAGTCATGGCCATGGGCTAGATTATCTCAGCATAA
AATGCGTTTGTGTCTTGAATTACTACCTGGTATATATATATATAAAGGAT
CGTGCCACCCCTTCCCATCCACTCTTCCTCCCCTCTTCTGCCCCCCTTTT
CGAATCTACCAACCCCATTTATCCACTAAGTGCTGTTGCTATTGCTGTTG
CCGTTGCTTCTCCTCTGTGCCCAATCGTGTTTGATCGTTGCTGTCAAAAA
AGTGATGACGGCGGGCAATTTCAGCGGCGAGCAGCAAGAACATGCGATGG
ACTATATGAGCGCGGGGGGCTTGAAAGATATTTTGGGCGCCAGTTCTCTT
GTGGCCGCCCCTTTTGTTGCCGAGGAAACACCAGGAAGAGGAGCGCCGTT
GTTGTCAGGAGACCGAGCGACGGCGGAGGTGGAGACGGCGGCGGGTTCGA
CAGCGGAGGGAGGCGGGAAGGAAAAAGAGAGTGCGTGGATTGATTCTTGT
AAATTAAAAAGAAAAAAATACGCTATCGATGATGATTTTCCTCTCACAAC
AGTGTTGAATCTTTATCCAAGTGTATTGTTTTATTTTATTTTATTTTTCA
ATCTGCCACACTCCCGCTGGCGTAGCTGTTGCATGACCACTAGTTCAAGA
CTTGAAGAGGACAGTTCAATTTTTTGTCCCCGTTTTTTCAAATTTAAAAT
GCGCTCGAAATATAGATTGCACCTTTTGTGTACATGTTTTTGTGTTTTTA
TCCGTTGTCGATCATGTCTATGTGTGTGTGTGTGTGTTTTGCGGGGGAAT
CACGTTGGACTCTGGCAGCAGCAGCAGCGGCGGCGGCGACGGTGGCGCCT
CAAGCAGCCATGTCGGCGAAAGAGCTGAAGGCAGCGATGGCCACTTTTGA
GGACGCTGACGATGTGGAGGCCGGGAGGGCGCTGGAGAGAGAAGCCGCTG
ACGAGCAGATGGAGTTCGACGACAACGGGATAGCGTCAACCAAGGTATTC
GTTTCTGAAGAAGATATAACAAACAGTGGATGTGCGTTTTGCACGTGCAT
GGTTCCTCTTATTCCGGGTTTTCGAAAATTGCTGATGAGTAAACATGGGG
ATAGTTACTATATTTATTATATTGATCACCATCGGTTACATAGTCTCAGC
GTAAAATCCACGTCAATGTTGTGACATTACTATTACCTTGAATATTTTAG
GAGTATTGAGGTTTACGTGCTTCTCCCCGTTCCCTCTCATCTCATGTATT
TGCCGTGTTGTGTTACGGTTGTTGAGTCGTGTGACATTGTGTGTCATCTT
AGGTAAGGCCCATGTATTTCTCTACAGTGTTATGCGATTTTCCCACTCCA
GTGTTGCAAAAGGCACGTGGCCCATGCATCAAGTACAAAATACATGTCTT
ATTTATATACATGAGGTAACGCTGATATTTGTAACTCTTTCGTGTTCTTC
TTTATTATTTCGTTGGACGCGGCGCTAATAGGAAGAAGAGAAGGATGACG
ACAACGATGCTGACGAAGAAGTTGTGGAGAGTAACGCCAACGGCCCGAAC
TCAACCGGTACCAGTAATGCCGCCGCTGACGGGGATGATGGGGAAGGAAA
AGAAAAGACTGACAAGGAGCTAGAAGAGGAGTTCGCTGCGTGGCAGGCAA
GAACGTTTTACTGCGTGTGTGTGTGTGTGTATATATGTTTGTGTGTCTGT
GTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTGTCTGT
GTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTGTCTGT
GTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTCTTTGTGTGTCTGTGT
GTGTCCGTGTGTGCCTCACAACTGGTGCCTGTTATTTGCGTATGTAGGTA
CAAATGTAGTGAGACTCGTGCGAGTTTTGTTGCTGCTGAAATGGATCCAA
ACTATTGATGGATTGCGAAACAAGCAGTGTTTTTATACAAATGCCACATT
TGTGCGTGATTTCACACTTGCCGTTTTTTTCCCTTTTATTCTACGAATCT
TGCTTCCAGACCCTTTGTGTCTGTCGTGCAAAACAGGCGTTGCTCAACAC
GTCGTACTCACCATATCAATTACAGTTGTACATGGGCGTTTCACGTTGTC
CACTTTCCATTTTCTTTTGGTGACGAACCCCTCCAGCGCTCCGCGACCTG
TCGCGTAGATGCAAGTAATAAATGGACATTACTTGTGCACAGGAGTGATT
CAGCAATCGACCAGACCATAGATTGGGCATGGCGTTTAATCGCTGACTTG
ATCCAATTTTGCTCACTAGTGTACATAACTGAGAATCGAGGAAAGCTACA
TTACCTCAACAGGGGTACCATGGAGTTCTTTCGTGAGTGCTACAGAGTTA
CCAACTATGGCAGGTAGGTTGACTCGCATAGTGTCATCTGATCCCGCCCC
CTCCCTCCCCCTCCACGGCCGCGGCTGCGGCGCGCACCAATTCAATCGCT
ATGATGTTATTTTCCATGGGTTGAATCCGCAGAACAAGGTGGGACCCGAC
GTTTCTGCGCTGGAGGCATCGCTGGCTCCTATTGAGCGCTACGCCCTGCG
AGTGCGCAGCGAGGTGGACCCGTTTTACAGCCTGTACTTCCGAACAGAGG
CTCAGCGGCGAGAGGAGGTGGAGGCGGCTGGAGGGGACCTTGATGTGGAC
ACGCTAGAAGGTATTGTTTGAAGTATTGTTCTTGACTGCGCCAAGTGCAG
CTCGTGCGTTGTTCTTGATTGATCCACGCATTAGGGCTCGCTAAGGTACT
GTCGCATCAATATTCGTTGTCGTTCGGAAGTTACTTGAGTAAAAAAAAAT
CTGTCCCGAAATGGTGACCTTATGTTACTCTATGGGGAGGGTACCTACCG
CGTGTATCGTGGGGTATAGCATACCGTGTTTGGTGTTTGCAGGGGACTTG
ATGCGTGAATCGGGTCAAACCCACGTGACAGGTAATGGAGATATCGACGT
CCTCCGCCGCTTCCACGATTTTTTCTATGGAAAATAACATGGGTTTAAGG
GTTTGTCAGATGAAAAATGGAAAATAGGTTTAATGACTTTCAAATTATAC
TGAAAATTATCGTCCACACATGTGATCCGCGTCGAATATTAGCTATATAT
ATATATTTTTTTTTAAATATTTTTTTCAAAGCCCAGTCAAAGGGGGGTGG
GTAGTGGCTAACGTTTTATTCGTGAGAATGATACTATAGGGGCGCCAGCG
AGCACAGCAATAGGAAGTCAAGTTTTTTGTGGTTTGTTGAAAATACTTCG
GTGCCAAGAAGAGTCTGTTTGTGTTCGTCTACGAGATGGACTGTGATTTG
TCTCCGCTTGTTTTGTTTGAACCCGCCAATGCTTGTCTGAGGCGAAGCCT
TTTCCAACCGGATTGTAACCGATCGGCGTATAGCTTTCGGCATTTACAGC
ATTGCTTGGAAGTACCGCAAGTAGTTATGTCAAGTCCGCGTCGTTGAAAA
TGTCTATTTTAGCCTGTTCTTGCCAGGTAACTCCACTCACCCGGTCGATC
TGTTATGTATGCCTCGTTGGTTCATCGTCTTGGCCCTCTTTGTCGTTCGT
TTTCCATTTTTTTTTCCTGTCTTTTCTATTTGTTAGTATCTGCTTTATTT
ATTGTATATATATATATATGTGTGTGTTCGATCGCGTCGCTTTTGGTTTT
TTTGTCCACGATACAAACAGCCGAAAAGGAAGCGGAAGAACGTCGGCAGA
TGGAATCTGGAGAGCTACTTGCGTGTCATGTCGGGAAGAAGCGGGTGAGA
ATCGGTATCCACGATGCTTTTTTTCGTTTTCTTTTTTTCGTTTCCATACC
CAATAGCTCTCGTGCGATCACCCCCCCTCCCGCCCTATTGACGTAATTTT
GCTCATGAATGTACACAACTGAAAATTGAGGCAGCTGCATAACTTCAACA
TGGGTACGATGGAGTTATTACGTGACTGTTAGAGCTTAGTTTTAGTAAGT
GTGGCAAGTGGGTCTCCCCCCTAATTTGTTCAATTTGTGGATAAGTAGTT
CAGCAACAAAAAAGGAGGCCCTAGTGATCTAATTTTGCTGATAAGTGTGT
ACAACTGAAAATTGAAGTCAGCTGCATCATCTCAACATGGTTACAGTGCA
GTTATTTTTTGAACCCCCCCTCCCCCCCCCCCAAAAAAAAAAAACAAGAA
AAAAAACAAGAAAAAGATACAGTTTTAAGAATCAAAGGAGAGAAATGAGG
TTCCTCACTAGAGATGGGCATCGCCTGAGAAAATCGAGTTGAACCAAGGT
GCCCACCAAATCCGCTGGAAAACAGTCGGTGAACTATTTAATTTCTGGTT
TGTGCCCCGCTCTTTTAGTACATTTAATGTTTATCGAAAAAATGATGATT
TTTATGTATATGCGTTCCCGCTGTCCCGTCTGACACAGCCTCACGCTAGT
AAGTGATCGGTTAGGTTTGCGTTCCCCCCGTGCCTACTGTTGACGCAGGC
GCAGCGACAGCGAGAGCTGTTCTCGAGGGATCGGGCAAGAGCGGTTTCGG
AAAGGAAGAAACGACTCTTAACTGGAGAGGCGTGGGAGCTTCGCGCCGAC
GCTATCTCCAAGCTGCCCTACTGGTACAATCGCGACACGGGTGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig13221:1810..7104-

>mRNA_H-paniculata_contig13221.2019.1 ID=mRNA_H-paniculata_contig13221.2019.1|Name=mRNA_H-paniculata_contig13221.2019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2052bp|location=Sequence derived from alignment at H-paniculata_contig13221:1810..7104- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGAGCACACCGCATTGGGCAGACGCGAGAGGTGCACATCTACCGCTTGG
TGACATCCAGCTCTATCGAGGAGAACATCCTCAAGAAGGCTCAGCAGAAG
CGACATCTCGACTTCTTGGTCGAGCACACCGCATTGGGCAGACGCGAGAG
GTGCACATCTACCGCTTGGTGACATCCAGCTCTATCGAGGAGAACATCCT
CAAGAAGGCTCAGCAGAAGCGACATCTCGACTTCTTGGTGATGACGGCGG
GCAATTTCAGCGGCGAGCAGCAAGAACATGCGATGGACTATATGAGCGCG
GGGGGCTTGAAAGATATTTTGGGCGCCAGTTCTCTTGTGGCCGCCCCTTT
TGTTGCCGAGGAAACACCAGGAAGAGGAGCGCCGTTGTTGTCAGGAGACC
GAGCGACGGCGGAGGTGGAGACGGCGGCGGGTTCGACAGCGGAGGGAGGC
GGGAAGGAAAAAGAGAGTGCTGATGACGGCGGGCAATTTCAGCGGCGAGC
AGCAAGAACATGCGATGGACTATATGAGCGCGGGGGGCTTGAAAGATATT
TTGGGCGCCAGTTCTCTTGTGGCCGCCCCTTTTGTTGCCGAGGAAACACC
AGGAAGAGGAGCGCCGTTGTTGTCAGGAGACCGAGCGACGGCGGAGGTGG
AGACGGCGGCGGGTTCGACAGCGGAGGGAGGCGGGAAGGAAAAAGAGAGT
GCGACGCTGACGATGTGGAGGCCGGGAGGGCGCTGGAGAGAGAAGCCGCT
GACGAGCAGATGGAGTTCGACGACAACGGGATAGCGTCAACCAAGGACGC
TGACGATGTGGAGGCCGGGAGGGCGCTGGAGAGAGAAGCCGCTGACGAGC
AGATGGAGTTCGACGACAACGGGATAGCGTCAACCAAGGAAGAAGAGAAG
GATGACGACAACGATGCTGACGAAGAAGTTGTGGAGAGTAACGCCAACGG
CCCGAACTCAACCGGTACCAGTAATGCCGCCGCTGACGGGGATGATGGGG
AAGGAAAAGAAAAGACTGACAAGGAGCTAGAAGAGGAGTTCGCTGCGTGG
CAGGCAAGAACGTTTTACTGCGAAGAAGAGAAGGATGACGACAACGATGC
TGACGAAGAAGTTGTGGAGAGTAACGCCAACGGCCCGAACTCAACCGGTA
CCAGTAATGCCGCCGCTGACGGGGATGATGGGGAAGGAAAAGAAAAGACT
GACAAGGAGCTAGAAGAGGAGTTCGCTGCGTGGCAGGCAAGAACGTTTTA
CTGCAACAAGGTGGGACCCGACGTTTCTGCGCTGGAGGCATCGCTGGCTC
CTATTGAGCGCTACGCCCTGCGAGTGCGCAGCGAGGTGGACCCGTTTTAC
AGCCTGTACTTCCGAACAGAGGCTCAGCGGCGAGAGGAGGTGGAGGCGGC
TGGAGGGGACCTTGATGTGGACACGCTAGAAGAACAAGGTGGGACCCGAC
GTTTCTGCGCTGGAGGCATCGCTGGCTCCTATTGAGCGCTACGCCCTGCG
AGTGCGCAGCGAGGTGGACCCGTTTTACAGCCTGTACTTCCGAACAGAGG
CTCAGCGGCGAGAGGAGGTGGAGGCGGCTGGAGGGGACCTTGATGTGGAC
ACGCTAGAAGCCGAAAAGGAAGCGGAAGAACGTCGGCAGATGGAATCTGG
AGAGCTACTTGCGTGTCATGTCGGGAAGAAGCGGCCGAAAAGGAAGCGGA
AGAACGTCGGCAGATGGAATCTGGAGAGCTACTTGCGTGTCATGTCGGGA
AGAAGCGGGCGCAGCGACAGCGAGAGCTGTTCTCGAGGGATCGGGCAAGA
GCGGTTTCGGAAAGGAAGAAACGACTCTTAACTGGAGAGGCGTGGGAGCT
TCGCGCCGACGCTATCTCCAAGCTGCCCTACTGGTACAATCGCGACACGG
GTGAGGCGCAGCGACAGCGAGAGCTGTTCTCGAGGGATCGGGCAAGAGCG
GTTTCGGAAAGGAAGAAACGACTCTTAACTGGAGAGGCGTGGGAGCTTCG
CGCCGACGCTATCTCCAAGCTGCCCTACTGGTACAATCGCGACACGGGTG
AG
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