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Homology
BLAST of mRNA_H-paniculata_contig1322.2016.1 vs. uniprot
Match: D8LCE2_ECTSI (Nuclear pore complex protein Nup85 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCE2_ECTSI) HSP 1 Score: 680 bits (1754), Expect = 6.710e-228 Identity = 423/846 (50.00%), Postives = 500/846 (59.10%), Query Frame = 2
Query: 233 AGLGAVGYVGWPARRLILACHRIFLN-------GVHNEPVAVSLEHRGVIFWSLC--NMDTDMEGSAVDDEGLKDEDTFHDGLTDFYHVWTLAEAFLLDSMPLPAAPLLRWLKMFLQSNEEEGSRAELEQAESAALGDSEAGVTADMTPAYWKAVRSLVVGVLPRRAAQMLRCHPHGRDNADEVGALARQLEKMPLLLAERGGQEQEDVGGGNGLAKGGLELDPELFFGTWARWQKGCKDAASSFGVVAGAVGGADRAGIRAGGGEQKRELRGLWGILCGERSCLEEGTKSWVGLLAAVLAFERPDVRKEDVAALMHECEMKYPPHDGEDFLLSVIRDASTGAVDAILRFAQEHGDTLALSACAAHLVDLLARAERPAVTNAQRSWFLRRLVSRLREFPCGGWELAAAYVSGDDADADDXXQERRCGGKGAVAVAPAGNEAARRLQVLKDIASAAEPGSERAAHELVEWCLVNNLGDAAVVDVCRARGATWLAKTGLSAAAMGIVDEAAASGGSGEGGAQDKSRRSGVGGIPGARGKAAYWLAKGGGGVQLERLCAEVSEGLMVDVSVPPVGAEDVGGTQEVAQAALDEAEGVLAAIPPEISGPELFFLARYKDIADNLMAESEARRRQRRNA---PTTALERGPGARAAGFLAVKLLAPXXXXXXXXXXXXXXXXXXXXXXXXXXRTWAHLLRLALPALKASGEAAADGQGADGEVDV---VTAPQVHALLGKMQVLAASEHRVGS-------TGGGASGRPSTLSRAPKPYGFHGGR----EEVLEIRKALANCLSGAIMVQNALGGRARRVAAVSATGHSGGAS---RRKVPAETLIGPRVSV 2683
AG +GY GW AR L+LA HRIF G + V+ SLEHRGVIFW L N ++D+ +A + +DED FHDGLTDFYHVWTLAEAFLLDS+PLPAAPLLRWLKM+ S E+E +R+EL++ E AL AG +AD PAYW A+RSLVVGV PRRAA++LR HP GRDNA EVGALARQLE MPLLL E A+ LD E FF TW RWQKGCK AA FGVV G G DR G G ++R+LR LWG+LCGER CL E T +W G AAVLA+ERPD RKE+VA++M EC Y H E FL VIRDAS GAVD+IL+FA++HGDTLALS CA HLVD+L+RA+ AVT+ QRSWF RRL RLR PCG WELAA Y+SG + ++ G +L+++A P SERA HELVEWC LG+ VCRARGA W+AKTGLSA AMG AA EG R +PGA GKAAYWLAKGGG VQLERLCAEVSE LMV+V A DV Q+ Q L EA+GVLAA+PP ++GPEL FL RYK+IAD L AE+ + + ++ GPGAR AG LAV +LAP G+A G GAD + VT QVHALL K+Q L ASEHRVGS + GG TL+ AP PYGF G E+V EIR+ALA CL A+M QNA V + G G + R++PAE L+ PRV+V
Sbjct: 34 AGAAELGYQGWAARHLVLAFHRIFAEQSERAQWGDTGDLVSESLEHRGVIFWCLTHINSNSDVASAAPTEADRRDEDVFHDGLTDFYHVWTLAEAFLLDSIPLPAAPLLRWLKMYSLSGEDEAARSELDETERVALEADAAGGSADPNPAYWDALRSLVVGVAPRRAAELLRSHPEGRDNASEVGALARQLENMPLLLREGXXXXXXXXXXXXXXAE--AHLDREGFFETWTRWQKGCKAAAGRFGVVVGV--GDDRGGGDV--GPERRQLRWLWGVLCGERGCLVEATNTWSGFFAAVLAYERPDTRKEEVASVMRECTRVYSEHQEEAFLTKVIRDASAGAVDSILKFARDHGDTLALSVCATHLVDVLSRAKFTAVTHQQRSWFFRRLADRLRASPCGFWELAATYLSGGSSRDGGDDEDDEAG-------------------LLRELALGVVPESERATHELVEWCRARGLGEEVEAAVCRARGAAWIAKTGLSAVAMGTAVAAA------EGETSSDGAR-----VPGACGKAAYWLAKGGGWVQLERLCAEVSERLMVEVYSGVGSAADV---QQAQQVVLAEADGVLAAVPPGVNGPELSFLGRYKEIADLLSAEAAGQPPPPHASGIGSSSPAAVGPGARLAGALAVDMLAPRG--------------------------------------SCDGDAPVAGAGADEGEEASAGVTVAQVHALLAKLQALVASEHRVGSVRGVWNRSRGGPGCGGGTLATAPAPYGFCSGGGSGVEQVSEIRRALAGCLGAAMMAQNAAEAAPEAVGSGRRRGGRGDFTLLGTRRLPAEALVDPRVAV 802
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 3384 |
| Cds size | 2673 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1322.2016.1 >prot_H-paniculata_contig1322.2016.1 ID=prot_H-paniculata_contig1322.2016.1|Name=mRNA_H-paniculata_contig1322.2016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=891bp
MAFSFNDMGRSAAAGYHIPISAMDVSFDGVSPSPFRANQHDDDDDDEDQH
QHQHQHHDVVMSSTPAVEYEEAGLGAVGYVGWPARRLILACHRIFLNGVH
NEPVAVSLEHRGVIFWSLCNMDTDMEGSAVDDEGLKDEDTFHDGLTDFYH
VWTLAEAFLLDSMPLPAAPLLRWLKMFLQSNEEEGSRAELEQAESAALGD
SEAGVTADMTPAYWKAVRSLVVGVLPRRAAQMLRCHPHGRDNADEVGALA
RQLEKMPLLLAERGGQEQEDVGGGNGLAKGGLELDPELFFGTWARWQKGC
KDAASSFGVVAGAVGGADRAGIRAGGGEQKRELRGLWGILCGERSCLEEG
TKSWVGLLAAVLAFERPDVRKEDVAALMHECEMKYPPHDGEDFLLSVIRD
ASTGAVDAILRFAQEHGDTLALSACAAHLVDLLARAERPAVTNAQRSWFL
RRLVSRLREFPCGGWELAAAYVSGDDADADDDDQERRCGGKGAVAVAPAG
NEAARRLQVLKDIASAAEPGSERAAHELVEWCLVNNLGDAAVVDVCRARG
ATWLAKTGLSAAAMGIVDEAAASGGSGEGGAQDKSRRSGVGGIPGARGKA
AYWLAKGGGGVQLERLCAEVSEGLMVDVSVPPVGAEDVGGTQEVAQAALD
EAEGVLAAIPPEISGPELFFLARYKDIADNLMAESEARRRQRRNAPTTAL
ERGPGARAAGFLAVKLLAPPVAADNSSGSSAVSASSQASSPPPPPRTWAH
LLRLALPALKASGEAAADGQGADGEVDVVTAPQVHALLGKMQVLAASEHR
VGSTGGGASGRPSTLSRAPKPYGFHGGREEVLEIRKALANCLSGAIMVQN
ALGGRARRVAAVSATGHSGGASRRKVPAETLIGPRVSVGS* back to topmRNA from alignment at H-paniculata_contig1322:432..9953+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1322.2016.1 ID=mRNA_H-paniculata_contig1322.2016.1|Name=mRNA_H-paniculata_contig1322.2016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9522bp|location=Sequence derived from alignment at H-paniculata_contig1322:432..9953+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCTCTGGGGCGAGATAGCATGGCGTTCTCGTTTAATGACATGGGCCGTA
GTGCAGCGGCAGGGTACCACATTCCAATCTCCGCAATGGACGTCTCTTTC
GATGGAGTGTCGCCGTCCCCTTTTCGTGCCAACCAGCACGACGACGACGA
CGACGACGAGGACCAGCACCAGCACCAGCACCAGCACCACGACGTGGTGA
TGAGCAGCACGCCTGCTGTTGAGTACGAGGAGGCGGGGTTGGGCGCCGTT
GGATATGTGGGGTGGCCTGCACGTCGGCTCATCCTGGCTTGCCACAGGAT
ATTCTTGAACGGCGTGCATAATGAACCGGTCGCTGTGTCTTTAGAGCACC
GAGGTGTGATATTCTGGTCGCTCTGCAACATGGACACCGATATGGAGGGC
AGGTGAAAAAACAAGCGGTACTGAAGAACCACATCCACTATAGTACACCA
GTCTCGAGTTTAGCGCCGACAGACGGGTACGACACTGTCTGTTATCTTCG
ATACAGACGGCTATTGCCGATTTTGAAAAGCGGTCCATCGTCCATACGAT
GTGTCCATTCGATATATCATGTTTGTAGTTGGGATCTACTGCTGTGCCGG
TAGTGTGTTGTGTTCAGTTGATGGATCGAGATGATATACCATATAGATGC
ATGTCGCCACTATTAAAGCCACCTGGACAAACATGACAAATGGGCGGTGA
GATTGGGTTCGTCAGAAAAACGGTGCGCCTAGGTGCGCTGTACTGTACAG
TAGGACAAGCACCGCGATCTTCTTGAACGTGAATGCACCTCTGGTTCCAA
CAAAGCTCCGACATTCGTTTTTACGGTTAGGCACACTATCTTTGTGTATA
CACCGCCGACCACTCTGCGGTCCCTGAATTCAGTTCAATAGTCATTGCCT
ATGACATATTCGAGTGAAGTTGCTTCGTTTGTTTTGATACAGGGAGATCG
ATTGTGATAAAGCACGGCCCCCCTGACGAGAAGTTCCCCTAGAATAGTTT
AAGGCTCGCTTTCTGGTAACCTAGAGTAGAAGAAAGGGGGGTCAAATTGT
GACCCCAACTCAAATTCGCATGTAAAGTAAGAAACAGCACTGCTTCATGA
TTCTCGCGAGGATGAGGCTTAGACCCGCACCCGATATGGGAGTTTATCAT
CGGGCCCATGCTATATTGTACACACCTACAAACCGTGGTTCACCCTGAGT
TTGTTTTTCTTTTTTTTACATAGACTAGCTGCATTCCTCATGGTACAAAC
ATTTTGTAGCCCCACACGAAGTATGGTATGGTACACTTTTGGTACACTAC
ACGGTGGTCCAGCCGCCCAAACGCGAACAGGAAGCTCAAGGGTAGGCCCA
CCCGGGTGTCATCCGGCATAGGTAAACAAGAAAAAAACAACACAAACTAC
CGTATAGTGAAGAATCTGAACGTACCCTACGTAGCGAGCGCCTCCATGCC
CTTCACCCATTTGACGTGCACAATCTGTGAGGAGAGAACAGCAACGAAAG
AAACACGAATAGCTATGGCGGCAAGTCAGTCCCTGCTGAGCCTATTCTAG
GACAGATGACACCTTACCGACGCACTTTCGTAACGGAGTATTCTGGTTTC
TTAATTGCAGGCAACAGGGGCAACCGCCTTCTGTACAAAATACCGCGTCT
TCCTCTACGAAAATAATGGCGTAAATAGAAAGCACCTCGGTGCTACCGGT
CGATGTTCAAGAAGAACCTGCAGCAAAGCGAAAGGGAGGGGAGGGAGAGG
GGGGTGCGCCATTTCCACTCTTTCACTTCGATTGCCTCCCGCCTTGGAGT
TCAAGTCCCGTCATCCAAGCACGCGTCCTCCGTCACCTCACCCTACGTCT
TGCATTGCTCGTCGTCGCTGCTTCTTTTCCAGTCGCGTTTTTTTCCCGCC
TTTGCCCATCGCTGAAAATAATATGAGGAAAATGTGGCTGATTACACGCG
ATCTTCCTGGTATCTTCCTTGATTTGTTAATCTATTTTCACGCAGTGGGG
CCAGCACTCCTAGTTCTAGTCACTTCTTGACGATTGCCAATCACGCCACC
TCGTTGAGTACACCCTGCCCCAGCTCTGCGGATGTGTCCGCTACTTGGCA
ACAACGTATCTCGGGGCACCCCAGTACTCCATATATCTACGATGTGGCCC
GTAGACGAAACGGTCGCAACCTACGAAGATCATGGGCCGTAAGTTATTTT
GCGAAGAACGACACGTGGACGTAGTGTGTGGGTCGACCCAGCACTACCCC
GACCGCGTCCATCGATCCATGGTCATTGATCAATAGCGTTTGAAGTGGCG
AGGACGGTATACTCGAACCATAGGGCATGGGGTAGCACATATCACCCCGG
ATAATGGCATTTTTCGAAGAAGACTGGTCTTTCCTTGTCCACAGAGCATT
TCTATCTATTGACAGGTCTCGACCAAATATTTTCGAACTGTACGCTGGTC
ATGGTCATGAGCGCCGTAGTTTTCGCGGAAACTGAGCTGAACAATGTACG
TGACCGACTGGATGATACTGTGTGCACTGTAGTCAACGATACTTCGGTGA
CGGGGCACTCCTTACTCTCAAAATTCGATGGAGGGCGGCAGTGCTGTCGG
TGAATCCCCCTTGACAGCCGGGAGGGAAGGGCCGTTGGGCTCGTGGCAGT
GCCAAAGCCGATATCTTCGAGATATGTCGGCTGCTACCGATACACGAACA
ACCGCTCATTTTCGATACTCCACAAAATGAAAACATCTCTTTTTGGACAA
GGGCACAAAAGGTGCCATGATACTTGTAACTTATCTTCCTTTTCATCACA
AGTTATAACCGTATACGTTTTTCAGTCCCTGAAAAGTCCACCACTCTAGC
CCTCCCTCCTCCCGTGCCTCTTTACGCTATGCCTACTTGTCCATTTGGTC
CACCGCCAAAACAACAAAACTATATTATTAAAAGTGCGGTCGATGATGAA
GGTTTGAAGGACGAAGATACGTTCCATGATGGGCTAACCGACTTCTACCA
CGTGTGGACGCTGGCCGAAGCGTTCTTGCTGGACTCCATGCCCCTGCCGG
CGGCGCCCTTGCTGCGGTGGCTGAAGATGTTCCTGCAGTCCAACGAGGAG
GAGGGATCGCGGGCTGAGCTCGAGCAAGCAGAATCTGCTGCACTGGGAGG
TGATGCAGTAGCGCAGTGCACAAGTGTACAATATATTCTAAAAAAAACAC
AATTTGATCGAAATATCGCTTACAAATGTCTCATAGGTGTACAGCCTGCT
TAACCATTCTCCAGTCAGGCCTAATAACTTGAATTGCGTTTTGCAGCGTC
CAGTGTACAATATAGCAAGTCTACAGTATACCCGGTTAACAGGCGCGCTT
GAACGCTGTGGTGACAATATAGTGCCCGGGGGCAAGCTACACGAGGATTG
TTCGATATCGTCGCCTTTTTGTGTCATCTTCTAGAGGTTCAATACTTTCC
CCGTATTTAAACATGAACATGCGGACCCACGCGTTCGTTTTTCGGTGGGG
GCGGGAGGGGTAAAGTGTAAGTAGCGGACATCAAATTGTGTATATAATCC
ACTCCACAAGGGGGGCAAACAGTCTGGTTCTGCCGGAAAATCTAATCTTC
GCAATTTAACAAGGGGAGGAGAAAGGCTTTGCCTTGAAACTGAAAACTCC
CCCCCAAACGTTTCGAGCACGACCTCCCTTAATCTTATCTGGTCATGATT
TTTTTTCAACAATTCAAGATCTCGTTTTTCTGTCCCTTGTTTTTCTTCTC
TCTCACCCTTTGAACTGTGCAACAGACAGTGAGGCGGGAGTTACCGCCGA
CATGACCCCGGCCTACTGGAAGGCCGTTCGATCGCTGGTTGTCGGCGTGC
TGCCCCGCCGAGCGGCGCAGATGCTGCGATGCCATCCCCACGGCAGAGAC
AACGCGGACGAGGTGGGTGCTCTTGCACGCCAGTTGGAGAAAATGCCTCT
TCTCTTGGCCGAGCGGGGGGGGCAGGAACAGGAAGACGTTGGCGGCGGCA
ACGGGTTAGCCAAGGGTGGCTTGGAGCTCGATCCCGAGCTGTTCTTTGGG
ACGTGGGCTCGCTGGCAGAAGGGGTGTAAGGATGCTGCCTCCAGCTTCGG
TGTTGTCGCGGGTGCAGGTGGGTCGAGGGGTGGGGGGGGGTGGAGTGGTA
ATTACTTGTGGTTGCAACTTGTGGATTTAGTGTGATGGAAACGAGCAGAA
CGGCCATCATCATCATTTCTTTGATTTGATCGTTTCATACTTCGGGTGTG
ATTACTTCGTCCCTTTTTTTACTGTAGCTTTTGGTTTGGTTTGCGTTGTT
TTGCGAATGTCAGAGTCGTTGTCCTTATTACCATCGCGTATCATCGCTGA
AGCTACCTACAAGAAGGGTACCAAATTTCCCTTTTTCGGTCCAAGTGAAA
ATAAAAGCTTGTGGGCACACGCGGAGATATCCATCTCTCTCTCTACGTGT
CACAAGTGGTCTTCTCGTGTCGAGGTATCGCCCCTAAAATCAGCCAAGGT
TCGTGTTGATTGGTGTAACGTTCTCCCAAAGGATTCATTCGATTAAAACA
ATGTGCTGCTTTATAGACTGTGTAGCCTTATTTTCACTTGAAAAAGAAGC
GAGTGAAGCAAGGTGACAAGCGAGGAAGAACGACCAAAGGAAACTTGAAT
ATAGTAGTGTAAGATGAGCGGCAAAAAGGCTGCGTTTAAGTCTTGTTTAG
TCGTTCTCGCTCACTCGTCTCCTCGCTTGCCCACTTCTCATGTTTGGGTC
ATGGAAAACATAGCCTCGTCGGCGACATTGTACACAAGAATTACTGTGGT
CTTCTAATTGGAGTGACGACCGTCAGGCTGAACTGGGATTCCCAACTGGC
CGCGATAGGGACCGGGAAAAGCCCGTCGTGTTCTCAAAAATATTTAATGC
TGCTTTCGGCAGTAATTTTTGTAACAATCACGCCTCGATGCAATCCTCGA
TACTTTCTTTTCCTAAGGGGCTTTCAAATTTTGCCAAAAGAACACCCGGA
TTATCGAAGTGCTCCAAAGCGCAGTGCTTTCAGTACTTGTTGGCCATGAA
CGCTCGCGCCTGAAATCCTCCGATTTTCTTTTTTGTTTGTTCGTGCATAT
GCGTATTTACTCATCTTTGTAGGTACTCATTTTGGTCATTGTTGATGCTG
TATCCATATATCCATTCACTCATCCCGGTTTTATGTTTTCTCCGTTAATT
TTTCAATTACTAGGCAGAATCGAGTATTACGAGTGGCGCGTGACAGGTCG
AAAAAAAACACTCGGAGAGATATTGGAAAATGTTCCGAGAAAAACGTCAG
CTATCATCGTCATCATCATCACGTCATCGTGTTGACGAATAAGGATTATT
TGCGAATAAGCAAAATAACGTCTGTTTTGGCACACTTTTCTGTGGGTTTG
TCTTTTTTTTCACTATTTTGTATGATCAAGTTGGCGGCGCCGACAGGGCG
GGGATCCGGGCCGGCGGAGGAGAACAGAAGCGAGAGCTACGGGGGCTCTG
GGGCATACTCTGCGGCGAGCGCAGCTGCCTCGAAGAAGGGACCAAGTCGT
GGGTGGGCCTGTTGGCGGCCGTGCTGGCGTTCGAGAGACCGGACGTGCGG
AAGGAGGATGTGGCGGCGTTGATGCACGAATGCGAGATGAAGTACCCGCC
ACACGACGGAGAGGATTTTCTGTTGAGCGTGAGTCCTTGTCGTTGATTGG
TATAGCATGTGTGGTGGTGGTGGTGGTGGTGGTGTGATGGCCTTCGTTGT
TCGGGAAACTGCTATTTCCACATTCTTGTTTGTTTATTTTTTTGTCCGAG
TGTTTTCTCATTAAAGAGGTGTAAACGAGATGTATTAGTCTACTACAGAG
CTGTGTTATTTTATGTTTTATTTGATGTGCTTGTGGGAAGAGAATTATGC
TTGGATGTTCATTTGATGTATTAATGCTTATGGGCGGAACATGAATTGAC
GTAGCTTGTTATGTTGAGTGAACATAAATAACACTGACTGATTGACTGCA
CGGGGCGTACACGTAGCTGTGGCCTAGCTACTTCTTATGGAATATATCGT
TATTAATTGTGCTTAGTAATTATTGGTTTTGGGGGACGATAAATAGTGGA
TGGGGCTGCAGGAATACGGTAGGCGGTTTCTGTATGCTGTACGATCAGAA
GTGTGTTCGGTGTTCATTTGTGTTTTGCTCGTACCGTCATCGTACAGGTG
AACTGGCAAATGACCATCTACATTTTCAGTCCCTCTATGCAGGAAGCGCG
TTTTCTGACGTTGTAGGAAGCTAACGCATGCCCATTCCTCCTACACAGCA
TCCATATTTTGGGTTCCTTTCCATGTCCGGAGCAAGCCCAATGGCTATCT
CCCATCTCTAATGATCACTTCGCCAACAAGAATTCGCGTGCGTGCTATGT
AGCACCCCTGCCTCTGCACAATAGATGGTCCCCACCTTAATTCAACCCAA
TTGTTTGGGCTTTTGTTAGTTCCGTTGGTGCGCCCATCAGTCCATCCATC
CACCCACTTGCCGTACATATTTAATGTACATGACATTCGTCCCTCTCCTC
CGTCGTCGGGTACCTTCCTCCCGCCCCCGCCCCCCCGGCCTGCCCTCCCC
GAAAAACCAACCCAGGTGATTCGCGACGCATCTACCGGCGCGGTCGATGC
CATCCTTCGCTTCGCGCAGGAGCACGGGGACACACTTGCCCTTTCGGCGT
GCGCCGCCCACCTCGTCGACCTTCTCGCGCGCGCCGAGCGTCCGGCGGTG
ACCAATGCCCAACGCTCGTGGTTCTTGCGTCGCCTGGTAAGCCGCCTCAG
GGAGTTCCCTTGCGGCGGATGGGAGCTCGCGGCGGCTTACGTGTCGGGGG
ACGACGCCGACGCCGACGATGATGACCAGGAGCGTCGCTGCGGCGGTAAA
GGTGCAGTGGCCGTAGCTCCGGCGGGAAACGAGGCCGCACGGCGGCTGCA
GGTACTGAAGGATATCGCTTCGGCGGCCGAGCCAGGCTCGGAGAGAGCAG
CCCATGAGCTCGTGGAGTGGTGTCTGGTGAATAATCTCGGCGACGCCGCG
GTTGTCGACGTGTGTAGGGCGCGTGGAGCGACTTGGTTAGCCAAGACGGG
CTTGTCAGCGGCGGCTATGGGGATAGTGGACGAGGCCGCGGCGTCGGGAG
GCTCGGGCGAAGGAGGGGCGCAAGATAAGAGCCGACGTTCGGGTGTCGGC
GGGATCCCCGGGGCGCGTGGGAAAGCTGCTTATTGGCTAGCGAAGGGCGG
CGGCGGGGTCCAGCTGGAGAGGCTGTGCGCGGAAGTCTCTGAGGGCTTGA
TGGTGGATGTTTCTGTTCCTCCTGTAGGGGCTGAAGATGTGGGTGGCACT
CAGGTAATTCTAAGGGATTTATTTTTGCTACTGTTGCGGGGTAGCGGGCT
GCGTTTTGCGGGACGTGTTTTTATTTCTGAGCGAGTTCGGCTCTCTCGGC
GTGCATGGCTCTCCGCTGTTGCCAAGTATACCTTGTGCTGTTGTCCCTGG
GCGGGTCTTGTTGCTGAAACCATGTAAGCGATGCGTGCATGCGCCTACGT
TTCGAAATCTGTTGTTCTTCTGACAAACGTACCGTGGGGTGTCCCCTCTT
GTCGCCGAGTCCTGGAATGGTGTATGCGGCGGAATATAATTTTCAATGTA
CACATCGTTGATGATCGCTGGCAAGAGCGCCGTGCGTGCCTTATTTTGTT
CCTCCGAAGCTGCGAAGGTGTGTTGCTGAAAGGTTTATTTTGAAATGTTG
TGTGCTGGAACTGAGCTGTAGCCACTCTATCTAATGGTGCAAGGATACAT
ACATTTCCTACAAACGGCACCATCTGGGCCATCTGAAAATCTGGCAAAAT
CGAAATCTCAGGGTAAGATTAACTTTTCGTCGTTTCACCTCTACCTCAGG
TTCCGTGTAACCGCGCTTCAATACGTTCGGTTAAAACCTTCTAGCGTCGT
AAATACCGATCCTTGGTAAAAATGACTTAACCTAATCGCTCCACCACCAT
GCCCTGAGTAAATTTGGATCGTTTTCCCTCCATTGTCATGCTCCGTTCGC
GATTCACTAAATACTTATATGTATGATGCGAAGGAAGTGGCGCAAGCAGC
GCTGGACGAGGCGGAGGGAGTCCTCGCCGCCATTCCTCCCGAAATCTCAG
GACCGGAGCTCTTCTTCCTGGCGCGGTACAAAGATATTGCGGACAACCTC
ATGGCGGAGTCGGAGGCCCGTCGCCGCCAACGCCGGAATGCACCAACCAC
CGCGCTGGAAAGAGGGCCGGGTGCTCGGGCTGCCGGCTTCCTCGCAGTGA
AGTTGTTAGCCCCGCCTGTTGCCGCCGATAATTCTAGTGGTTCTAGCGCT
GTTTCTGCTTCGTCTCAGGCATCCTCGCCCCCGCCACCGCCGAGGACGTG
GGCTCACCTGCTGCGGCTGGCACTTCCTGCGCTAAAGGCGTCTGGCGAAG
CGGCGGCAGATGGACAAGGCGCCGACGGCGAAGTCGACGTTGTGACCGCG
CCGCAGGTTCACGCGCTGTTGGGTAAGATGCAGGTGCTGGCAGCCAGCGA
GCATCGCGTGGGGAGTACAGGTGGTGGAGCCAGCGGTCGCCCGAGCACGC
TGTCGCGAGCGCCGAAGCCGTATGGGTTCCACGGAGGGAGGGAGGAGGTG
CTGGAGATTAGGAAGGCGTTGGCGAATTGTTTGAGCGGAGCGATCATGGT
GCAAAATGCGCTAGGGGGACGGGCACGGAGGGTTGCGGCGGTGTCGGCCA
CAGGTCATAGTGGTGGGGCTAGCCGGAGGAAGGTGCCTGCCGAAACGCTG
ATCGGTCCGCGTGTTTCTGTCGGGTCGTGATAAAATGTTGAAAAAAAAAT
TTCCATCATACATGAGCGAGTTCTGCGAGGTGTTTGTCTCTCGGTGTTTT
CTTTTCTCGTAATATAGAACAAAAAGTGCCGCAGTTACCCGACCTATTCT
GTGATGATTGTCAATACTCTTAGCGTTTGTATTGATACGTTAGGTACTGT
TTTCGGGAGCTGTAGTCGCACGTTGAGGTCTCCTGCAGCAGCAAAGGATG
TGCAGACCTGTAAGAATGATGAATCTGTTGGGGTTTATTTTGTGATGTTG
GTTGTCACCGATTGACCACCGTGTTATTGCGCCAGTGGTATGGGCTGCTG
TTTCCAGTGCAGCAGCAGGGTGAAAAAAAATGCTGTGGGAAACCGCACAA
ATTTTGTAGAGAAAGAATTGATTTGAACATACCATTATTGTGCCGCGCAT
GTTTTCGCGTGCGAACAGTTGACTGGACAAGGCGTCCACAGTTAGCTCTT
GGCTCAGTCCACGAAGGAGTAGACATGCTCTGTGACTTCACGTCCCGACA
GCAGCTCCCACAGGAATAAGAAAAGTCAACTTTGAGGTTACAGGAGGTCA
AGTATAGTAGGTCAAGGTGACCTTTCAACCACGTCGCCGAGTTCATCCGT
GCTGGTCAGACCCGGATCGTTCTCGCTACCAATACAGCACGAATTCGGCT
GGATAGGGCATACTGTGTAAAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1322:432..9953+ >mRNA_H-paniculata_contig1322.2016.1 ID=mRNA_H-paniculata_contig1322.2016.1|Name=mRNA_H-paniculata_contig1322.2016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5346bp|location=Sequence derived from alignment at H-paniculata_contig1322:432..9953+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGTTCTCGTTTAATGACATGGGCCGTAGTGCAGCGGCAGGGTACCA
CATTCCAATCTCCGCAATGGACGTCTCTTTCGATGGAGTGTCGCCGTCCC
CTTTTCGTGCCAACCAGCACGACGACGACGACGACGACGAGGACCAGCAC
CAGCACCAGCACCAGCACCACGACGTGGTGATGAGCAGCACGCCTGCTGT
TGAGTACGAGGAGGCGGGGTTGGGCGCCGTTGGATATGTGGGGTGGCCTG
CACGTCGGCTCATCCTGGCTTGCCACAGGATATTCTTGAACGGCGTGCAT
AATGAACCGGTCGCTGTGTCTTTAGAGCACCGAGGTGTGATATTCTGGTC
GCTCTGCAACATGGACACCGATATGGAGGGCAGATGGCGTTCTCGTTTAA
TGACATGGGCCGTAGTGCAGCGGCAGGGTACCACATTCCAATCTCCGCAA
TGGACGTCTCTTTCGATGGAGTGTCGCCGTCCCCTTTTCGTGCCAACCAG
CACGACGACGACGACGACGACGAGGACCAGCACCAGCACCAGCACCAGCA
CCACGACGTGGTGATGAGCAGCACGCCTGCTGTTGAGTACGAGGAGGCGG
GGTTGGGCGCCGTTGGATATGTGGGGTGGCCTGCACGTCGGCTCATCCTG
GCTTGCCACAGGATATTCTTGAACGGCGTGCATAATGAACCGGTCGCTGT
GTCTTTAGAGCACCGAGGTGTGATATTCTGGTCGCTCTGCAACATGGACA
CCGATATGGAGGGCAGTGCGGTCGATGATGAAGGTTTGAAGGACGAAGAT
ACGTTCCATGATGGGCTAACCGACTTCTACCACGTGTGGACGCTGGCCGA
AGCGTTCTTGCTGGACTCCATGCCCCTGCCGGCGGCGCCCTTGCTGCGGT
GGCTGAAGATGTTCCTGCAGTCCAACGAGGAGGAGGGATCGCGGGCTGAG
CTCGAGCAAGCAGAATCTGCTGCACTGGGAGTGCGGTCGATGATGAAGGT
TTGAAGGACGAAGATACGTTCCATGATGGGCTAACCGACTTCTACCACGT
GTGGACGCTGGCCGAAGCGTTCTTGCTGGACTCCATGCCCCTGCCGGCGG
CGCCCTTGCTGCGGTGGCTGAAGATGTTCCTGCAGTCCAACGAGGAGGAG
GGATCGCGGGCTGAGCTCGAGCAAGCAGAATCTGCTGCACTGGGAGACAG
TGAGGCGGGAGTTACCGCCGACATGACCCCGGCCTACTGGAAGGCCGTTC
GATCGCTGGTTGTCGGCGTGCTGCCCCGCCGAGCGGCGCAGATGCTGCGA
TGCCATCCCCACGGCAGAGACAACGCGGACGAGGTGGGTGCTCTTGCACG
CCAGTTGGAGAAAATGCCTCTTCTCTTGGCCGAGCGGGGGGGGCAGGAAC
AGGAAGACGTTGGCGGCGGCAACGGGTTAGCCAAGGGTGGCTTGGAGCTC
GATCCCGAGCTGTTCTTTGGGACGTGGGCTCGCTGGCAGAAGGGGTGTAA
GGATGCTGCCTCCAGCTTCGGTGTTGTCGCGGGTGCAGACAGTGAGGCGG
GAGTTACCGCCGACATGACCCCGGCCTACTGGAAGGCCGTTCGATCGCTG
GTTGTCGGCGTGCTGCCCCGCCGAGCGGCGCAGATGCTGCGATGCCATCC
CCACGGCAGAGACAACGCGGACGAGGTGGGTGCTCTTGCACGCCAGTTGG
AGAAAATGCCTCTTCTCTTGGCCGAGCGGGGGGGGCAGGAACAGGAAGAC
GTTGGCGGCGGCAACGGGTTAGCCAAGGGTGGCTTGGAGCTCGATCCCGA
GCTGTTCTTTGGGACGTGGGCTCGCTGGCAGAAGGGGTGTAAGGATGCTG
CCTCCAGCTTCGGTGTTGTCGCGGGTGCAGTTGGCGGCGCCGACAGGGCG
GGGATCCGGGCCGGCGGAGGAGAACAGAAGCGAGAGCTACGGGGGCTCTG
GGGCATACTCTGCGGCGAGCGCAGCTGCCTCGAAGAAGGGACCAAGTCGT
GGGTGGGCCTGTTGGCGGCCGTGCTGGCGTTCGAGAGACCGGACGTGCGG
AAGGAGGATGTGGCGGCGTTGATGCACGAATGCGAGATGAAGTACCCGCC
ACACGACGGAGAGGATTTTCTGTTGAGCTTGGCGGCGCCGACAGGGCGGG
GATCCGGGCCGGCGGAGGAGAACAGAAGCGAGAGCTACGGGGGCTCTGGG
GCATACTCTGCGGCGAGCGCAGCTGCCTCGAAGAAGGGACCAAGTCGTGG
GTGGGCCTGTTGGCGGCCGTGCTGGCGTTCGAGAGACCGGACGTGCGGAA
GGAGGATGTGGCGGCGTTGATGCACGAATGCGAGATGAAGTACCCGCCAC
ACGACGGAGAGGATTTTCTGTTGAGCGTGATTCGCGACGCATCTACCGGC
GCGGTCGATGCCATCCTTCGCTTCGCGCAGGAGCACGGGGACACACTTGC
CCTTTCGGCGTGCGCCGCCCACCTCGTCGACCTTCTCGCGCGCGCCGAGC
GTCCGGCGGTGACCAATGCCCAACGCTCGTGGTTCTTGCGTCGCCTGGTA
AGCCGCCTCAGGGAGTTCCCTTGCGGCGGATGGGAGCTCGCGGCGGCTTA
CGTGTCGGGGGACGACGCCGACGCCGACGATGATGACCAGGAGCGTCGCT
GCGGCGGTAAAGGTGCAGTGGCCGTAGCTCCGGCGGGAAACGAGGCCGCA
CGGCGGCTGCAGGTACTGAAGGATATCGCTTCGGCGGCCGAGCCAGGCTC
GGAGAGAGCAGCCCATGAGCTCGTGGAGTGGTGTCTGGTGAATAATCTCG
GCGACGCCGCGGTTGTCGACGTGTGTAGGGCGCGTGGAGCGACTTGGTTA
GCCAAGACGGGCTTGTCAGCGGCGGCTATGGGGATAGTGGACGAGGCCGC
GGCGTCGGGAGGCTCGGGCGAAGGAGGGGCGCAAGATAAGAGCCGACGTT
CGGGTGTCGGCGGGATCCCCGGGGCGCGTGGGAAAGCTGCTTATTGGCTA
GCGAAGGGCGGCGGCGGGGTCCAGCTGGAGAGGCTGTGCGCGGAAGTCTC
TGAGGGCTTGATGGTGGATGTTTCTGTTCCTCCTGTAGGGGCTGAAGATG
TGGGTGGCACTCAGGTGATTCGCGACGCATCTACCGGCGCGGTCGATGCC
ATCCTTCGCTTCGCGCAGGAGCACGGGGACACACTTGCCCTTTCGGCGTG
CGCCGCCCACCTCGTCGACCTTCTCGCGCGCGCCGAGCGTCCGGCGGTGA
CCAATGCCCAACGCTCGTGGTTCTTGCGTCGCCTGGTAAGCCGCCTCAGG
GAGTTCCCTTGCGGCGGATGGGAGCTCGCGGCGGCTTACGTGTCGGGGGA
CGACGCCGACGCCGACGATGATGACCAGGAGCGTCGCTGCGGCGGTAAAG
GTGCAGTGGCCGTAGCTCCGGCGGGAAACGAGGCCGCACGGCGGCTGCAG
GTACTGAAGGATATCGCTTCGGCGGCCGAGCCAGGCTCGGAGAGAGCAGC
CCATGAGCTCGTGGAGTGGTGTCTGGTGAATAATCTCGGCGACGCCGCGG
TTGTCGACGTGTGTAGGGCGCGTGGAGCGACTTGGTTAGCCAAGACGGGC
TTGTCAGCGGCGGCTATGGGGATAGTGGACGAGGCCGCGGCGTCGGGAGG
CTCGGGCGAAGGAGGGGCGCAAGATAAGAGCCGACGTTCGGGTGTCGGCG
GGATCCCCGGGGCGCGTGGGAAAGCTGCTTATTGGCTAGCGAAGGGCGGC
GGCGGGGTCCAGCTGGAGAGGCTGTGCGCGGAAGTCTCTGAGGGCTTGAT
GGTGGATGTTTCTGTTCCTCCTGTAGGGGCTGAAGATGTGGGTGGCACTC
AGGAAGTGGCGCAAGCAGCGCTGGACGAGGCGGAGGGAGTCCTCGCCGCC
ATTCCTCCCGAAATCTCAGGACCGGAGCTCTTCTTCCTGGCGCGGTACAA
AGATATTGCGGACAACCTCATGGCGGAGTCGGAGGCCCGTCGCCGCCAAC
GCCGGAATGCACCAACCACCGCGCTGGAAAGAGGGCCGGGTGCTCGGGCT
GCCGGCTTCCTCGCAGTGAAGTTGTTAGCCCCGCCTGTTGCCGCCGATAA
TTCTAGTGGTTCTAGCGCTGTTTCTGCTTCGTCTCAGGCATCCTCGCCCC
CGCCACCGCCGAGGACGTGGGCTCACCTGCTGCGGCTGGCACTTCCTGCG
CTAAAGGCGTCTGGCGAAGCGGCGGCAGATGGACAAGGCGCCGACGGCGA
AGTCGACGTTGTGACCGCGCCGCAGGTTCACGCGCTGTTGGGTAAGATGC
AGGTGCTGGCAGCCAGCGAGCATCGCGTGGGGAGTACAGGTGGTGGAGCC
AGCGGTCGCCCGAGCACGCTGTCGCGAGCGCCGAAGCCGTATGGGTTCCA
CGGAGGGAGGGAGGAGGTGCTGGAGATTAGGAAGGCGTTGGCGAATTGTT
TGAGCGGAGCGATCATGGTGCAAAATGCGCTAGGGGGACGGGCACGGAGG
GTTGCGGCGGTGTCGGCCACAGGTCATAGTGGTGGGGCTAGCCGGAGGAA
GGTGCCTGCCGAAACGCTGATCGGTCCGCGTGTTTCTGTCGGGTCGTGAG
AAGTGGCGCAAGCAGCGCTGGACGAGGCGGAGGGAGTCCTCGCCGCCATT
CCTCCCGAAATCTCAGGACCGGAGCTCTTCTTCCTGGCGCGGTACAAAGA
TATTGCGGACAACCTCATGGCGGAGTCGGAGGCCCGTCGCCGCCAACGCC
GGAATGCACCAACCACCGCGCTGGAAAGAGGGCCGGGTGCTCGGGCTGCC
GGCTTCCTCGCAGTGAAGTTGTTAGCCCCGCCTGTTGCCGCCGATAATTC
TAGTGGTTCTAGCGCTGTTTCTGCTTCGTCTCAGGCATCCTCGCCCCCGC
CACCGCCGAGGACGTGGGCTCACCTGCTGCGGCTGGCACTTCCTGCGCTA
AAGGCGTCTGGCGAAGCGGCGGCAGATGGACAAGGCGCCGACGGCGAAGT
CGACGTTGTGACCGCGCCGCAGGTTCACGCGCTGTTGGGTAAGATGCAGG
TGCTGGCAGCCAGCGAGCATCGCGTGGGGAGTACAGGTGGTGGAGCCAGC
GGTCGCCCGAGCACGCTGTCGCGAGCGCCGAAGCCGTATGGGTTCCACGG
AGGGAGGGAGGAGGTGCTGGAGATTAGGAAGGCGTTGGCGAATTGTTTGA
GCGGAGCGATCATGGTGCAAAATGCGCTAGGGGGACGGGCACGGAGGGTT
GCGGCGGTGTCGGCCACAGGTCATAGTGGTGGGGCTAGCCGGAGGAAGGT
GCCTGCCGAAACGCTGATCGGTCCGCGTGTTTCTGTCGGGTCGTGA back to top
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